| HEAD | a417272 | 0.45.1. calcuate effective sample size for quantitative traits | 02 May 2022, 04:42:15 UTC |
| refs/heads/0.36.5.1_SPAcutoff | 67c2742 | update doc | 30 March 2020, 03:02:38 UTC |
| refs/heads/0.39.1_logPforSingle | 9605a90 | uncomment | 28 July 2020, 01:09:22 UTC |
| refs/heads/0.39.2 | 16f0365 | misc | 06 August 2020, 21:46:52 UTC |
| refs/heads/0.39.3 | ecda8b9 | lib.loc | 09 August 2020, 02:12:33 UTC |
| refs/heads/0.39.4 | 19bbc4e | 0.39.4 | 12 August 2020, 02:36:34 UTC |
| refs/heads/0.43.1 | cda9642 | update doc for 0.43.2 | 13 December 2020, 21:01:43 UTC |
| refs/heads/0.43.2 | cda9642 | update doc for 0.43.2 | 13 December 2020, 21:01:43 UTC |
| refs/heads/GATE_dev | 4e9bfb6 | test Firth beta | 30 August 2021, 04:07:58 UTC |
| refs/heads/SAIGE-cleanUp | df884c5 | update | 10 December 2021, 17:01:54 UTC |
| refs/heads/SAIGE_GENE_casecontrol_imbalace | b8afeec | Merge branch 'master' into SAIGE_GENE_casecontrol_imbalace | 27 August 2019, 17:00:16 UTC |
| refs/heads/SAIGE_GENE_casecontrol_imbalace2 | 56f44e7 | remove the old binary file | 24 June 2019, 04:13:59 UTC |
| refs/heads/SAIGE_homN_hetN | 836c306 | uncomment configure | 19 February 2020, 20:37:50 UTC |
| refs/heads/SAIGE_homN_hetN_surv | 20c6793 | fix the assoc test in the variance ratio part | 14 September 2020, 17:33:07 UTC |
| refs/heads/ScoreSPARcpp_v0.44.3 | 0727d99 | fixing bug for variants with AF > 0.95 | 13 July 2021, 21:05:10 UTC |
| refs/heads/ScoreTestinRcpp | 6acb07a | temp version ScoreTest is compiled and tested | 20 October 2020, 22:25:15 UTC |
| refs/heads/addArgumentforRobust | a08263a | update README and examples | 12 November 2019, 03:49:45 UTC |
| refs/heads/binary_conditional | 52bde77 | remove old binary file | 24 June 2019, 04:16:58 UTC |
| refs/heads/development | 3b47f7a | update README | 30 April 2018, 04:44:58 UTC |
| refs/heads/finngen | 46e5cec | merge to master-gene | 27 January 2019, 20:11:40 UTC |
| refs/heads/finngen_r5_jk | 3344d58 | recessive dosage | 05 March 2020, 19:45:30 UTC |
| refs/heads/finngen_r6_jk | cfc79ff | het analysis | 14 September 2020, 15:42:30 UTC |
| refs/heads/forChrXOnly | 9cc7279 | update documentation | 21 September 2019, 06:49:48 UTC |
| refs/heads/inv_fix_jk | 2ed9116 | an optional argument to remove binary covariates with a small count | 26 August 2019, 15:50:55 UTC |
| refs/heads/master | a417272 | 0.45.1. calcuate effective sample size for quantitative traits | 02 May 2022, 04:42:15 UTC |
| refs/heads/master-gene | 6c438df | Update README.md | 24 March 2019, 05:34:21 UTC |
| refs/heads/master-gene-finngen | f3a97c3 | allowing traitType to be specified using arguments for step 2. This is mainly for using model files produced using SAIGE version < 0.29 | 15 February 2019, 16:55:15 UTC |
| refs/heads/master_conditional | 8539680 | edit README | 03 August 2018, 18:29:09 UTC |
| refs/heads/master_conditional_GClambda | 9e9cccd | debug | 24 September 2018, 03:27:06 UTC |
| refs/heads/master_perfectSep | a095cf4 | fix a bug for quantitative traits when there is missing dosages for quantitative tratis | 14 November 2018, 20:00:40 UTC |
| refs/heads/new_dev | 3f2ab49 | Merge branch 'new_dev' of https://github.com/weizhouUMICH/SAIGE into new_dev | 22 January 2022, 19:34:57 UTC |
| refs/heads/new_dev2 | 9d3490b | set up offset for Firth logistic regression | 13 February 2022, 06:33:14 UTC |
| refs/heads/recessive_dominant_bgen_jk | b38dd5d | add null model argument | 27 November 2019, 19:07:45 UTC |
| refs/heads/rewrite_bgen | 14f2b6a | 0.44.2 - rewrite bgen reading | 03 March 2021, 19:08:16 UTC |
| refs/heads/subbranch_of_development_runSPATest | be5a344 | udpate README and SPAtest functions | 07 September 2018, 18:16:19 UTC |
| refs/tags/0.35.8.2 | e62ca96 | update to 0.35.8.2 with minor changes | 16 April 2019, 04:29:34 UTC |
| refs/tags/0.35.8.8 | 43e4e34 | Update README.md | 27 August 2019, 18:40:13 UTC |
| refs/tags/0.36.1 | 8a5d6f7 | Merge branch 'master' of https://github.com/weizhouUMICH/SAIGE | 18 November 2019, 05:14:03 UTC |
| refs/tags/0.36.2 | 39b8192 | update example R scripts | 24 November 2019, 00:00:26 UTC |
