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Tip revision: 3cc6795de3e55117b3ee40a486b3f2bf3160e592 authored by Kristoffer Carlsson on 20 October 2021, 07:50:35 UTC
add a missing transpose in LinearAlgebra.copy_transpose! to handle array-elements with non-identity transpose
Tip revision: 3cc6795
timing.jl
# This file is a part of Julia. License is MIT: https://julialang.org/license

# This type must be kept in sync with the C struct in src/gc.h
struct GC_Num
    allocd          ::Int64 # GC internal
    deferred_alloc  ::Int64 # GC internal
    freed           ::Int64 # GC internal
    malloc          ::Int64
    realloc         ::Int64
    poolalloc       ::Int64
    bigalloc        ::Int64
    freecall        ::Int64
    total_time      ::Int64
    total_allocd    ::Int64 # GC internal
    since_sweep     ::Int64 # GC internal
    collect         ::Csize_t # GC internal
    pause           ::Cint
    full_sweep      ::Cint
end

gc_num() = ccall(:jl_gc_num, GC_Num, ())

# This type is to represent differences in the counters, so fields may be negative
struct GC_Diff
    allocd      ::Int64 # Bytes allocated
    malloc      ::Int64 # Number of GC aware malloc()
    realloc     ::Int64 # Number of GC aware realloc()
    poolalloc   ::Int64 # Number of pool allocation
    bigalloc    ::Int64 # Number of big (non-pool) allocation
    freecall    ::Int64 # Number of GC aware free()
    total_time  ::Int64 # Time spent in garbage collection
    pause       ::Int64 # Number of GC pauses
    full_sweep  ::Int64 # Number of GC full collection
end

gc_total_bytes(gc_num::GC_Num) =
    gc_num.allocd + gc_num.deferred_alloc + gc_num.total_allocd

function GC_Diff(new::GC_Num, old::GC_Num)
    # logic from `src/gc.c:jl_gc_total_bytes`
    old_allocd = gc_total_bytes(old)
    new_allocd = gc_total_bytes(new)
    return GC_Diff(new_allocd - old_allocd,
                   new.malloc       - old.malloc,
                   new.realloc      - old.realloc,
                   new.poolalloc    - old.poolalloc,
                   new.bigalloc     - old.bigalloc,
                   new.freecall     - old.freecall,
                   new.total_time   - old.total_time,
                   new.pause        - old.pause,
                   new.full_sweep   - old.full_sweep)
end

function gc_alloc_count(diff::GC_Diff)
    diff.malloc + diff.realloc + diff.poolalloc + diff.bigalloc
end

# cumulative total time spent on compilation, in nanoseconds
cumulative_compile_time_ns_before() = ccall(:jl_cumulative_compile_time_ns_before, UInt64, ())
cumulative_compile_time_ns_after() = ccall(:jl_cumulative_compile_time_ns_after, UInt64, ())

# total time spend in garbage collection, in nanoseconds
gc_time_ns() = ccall(:jl_gc_total_hrtime, UInt64, ())

"""
    Base.gc_live_bytes()

Return the total size (in bytes) of objects currently in memory.
This is computed as the total size of live objects after
the last garbage collection, plus the number of bytes allocated
since then.
"""
function gc_live_bytes()
    num = gc_num()
    Int(ccall(:jl_gc_live_bytes, Int64, ())) + num.allocd + num.deferred_alloc
end

"""
    Base.jit_total_bytes()

Return the total amount (in bytes) allocated by the just-in-time compiler
for e.g. native code and data.
"""
function jit_total_bytes()
    return Int(ccall(:jl_jit_total_bytes, Csize_t, ()))
end

# print elapsed time, return expression value
const _mem_units = ["byte", "KiB", "MiB", "GiB", "TiB", "PiB"]
const _cnt_units = ["", " k", " M", " G", " T", " P"]
function prettyprint_getunits(value, numunits, factor)
    if value == 0 || value == 1
        return (value, 1)
    end
    unit = ceil(Int, log(value) / log(factor))
    unit = min(numunits, unit)
    number = value/factor^(unit-1)
    return number, unit
end

function padded_nonzero_print(value, str)
    if value != 0
        blanks = "                "[1:(18 - length(str))]
        println(str, ":", blanks, value)
    end
end


function format_bytes(bytes) # also used by InteractiveUtils
    bytes, mb = prettyprint_getunits(bytes, length(_mem_units), Int64(1024))
    if mb == 1
        return string(Int(bytes), " ", _mem_units[mb], bytes==1 ? "" : "s")
    else
        return string(Ryu.writefixed(Float64(bytes), 3), " ", _mem_units[mb])
    end
end

function time_print(elapsedtime, bytes=0, gctime=0, allocs=0, compile_time=0, newline=false)
    timestr = Ryu.writefixed(Float64(elapsedtime/1e9), 6)
    str = sprint() do io
        print(io, length(timestr) < 10 ? (" "^(10 - length(timestr))) : "")
        print(io, timestr, " seconds")
        parens = bytes != 0 || allocs != 0 || gctime > 0 || compile_time > 0
        parens && print(io, " (")
        if bytes != 0 || allocs != 0
            allocs, ma = prettyprint_getunits(allocs, length(_cnt_units), Int64(1000))
            if ma == 1
                print(io, Int(allocs), _cnt_units[ma], allocs==1 ? " allocation: " : " allocations: ")
            else
                print(io, Ryu.writefixed(Float64(allocs), 2), _cnt_units[ma], " allocations: ")
            end
            print(io, format_bytes(bytes))
        end
        if gctime > 0
            if bytes != 0 || allocs != 0
                print(io, ", ")
            end
            print(io, Ryu.writefixed(Float64(100*gctime/elapsedtime), 2), "% gc time")
        end
        if compile_time > 0
            if bytes != 0 || allocs != 0 || gctime > 0
                print(io, ", ")
            end
            print(io, Ryu.writefixed(Float64(100*compile_time/elapsedtime), 2), "% compilation time")
        end
        parens && print(io, ")")
    end
    newline ? println(str) : print(str)
    nothing
end

function timev_print(elapsedtime, diff::GC_Diff, compile_time)
    allocs = gc_alloc_count(diff)
    time_print(elapsedtime, diff.allocd, diff.total_time, allocs, compile_time, true)
    print("elapsed time (ns): $elapsedtime\n")
    padded_nonzero_print(diff.total_time,   "gc time (ns)")
    padded_nonzero_print(diff.allocd,       "bytes allocated")
    padded_nonzero_print(diff.poolalloc,    "pool allocs")
    padded_nonzero_print(diff.bigalloc,     "non-pool GC allocs")
    padded_nonzero_print(diff.malloc,       "malloc() calls")
    padded_nonzero_print(diff.realloc,      "realloc() calls")
    padded_nonzero_print(diff.freecall,     "free() calls")
    padded_nonzero_print(diff.pause,        "GC pauses")
    padded_nonzero_print(diff.full_sweep,   "full collections")
end

# Like a try-finally block, except without introducing the try scope
# NOTE: This is deprecated and should not be used from user logic. A proper solution to
# this problem will be introduced in https://github.com/JuliaLang/julia/pull/39217
macro __tryfinally(ex, fin)
    Expr(:tryfinally,
       :($(esc(ex))),
       :($(esc(fin)))
       )
end

"""
    @time

A macro to execute an expression, printing the time it took to execute, the number of
allocations, and the total number of bytes its execution caused to be allocated, before
returning the value of the expression. Any time spent garbage collecting (gc) or
compiling is shown as a percentage.

In some cases the system will look inside the `@time` expression and compile some of the
called code before execution of the top-level expression begins. When that happens, some
compilation time will not be counted. To include this time you can run `@time @eval ...`.

See also [`@timev`](@ref), [`@timed`](@ref), [`@elapsed`](@ref), and
[`@allocated`](@ref).

!!! note
    For more serious benchmarking, consider the `@btime` macro from the BenchmarkTools.jl
    package which among other things evaluates the function multiple times in order to
    reduce noise.

```julia-repl
julia> x = rand(10,10);

julia> @time x * x;
  0.606588 seconds (2.19 M allocations: 116.555 MiB, 3.75% gc time, 99.94% compilation time)

julia> @time x * x;
  0.000009 seconds (1 allocation: 896 bytes)

julia> @time begin
           sleep(0.3)
           1+1
       end
  0.301395 seconds (8 allocations: 336 bytes)
2
```
"""
macro time(ex)
    quote
        @compile
        local stats = gc_num()
        local elapsedtime = time_ns()
        local compile_elapsedtime = cumulative_compile_time_ns_before()
        local val = @__tryfinally($(esc(ex)),
            (elapsedtime = time_ns() - elapsedtime;
            compile_elapsedtime = cumulative_compile_time_ns_after() - compile_elapsedtime)
        )
        local diff = GC_Diff(gc_num(), stats)
        time_print(elapsedtime, diff.allocd, diff.total_time, gc_alloc_count(diff), compile_elapsedtime, true)
        val
    end
end

"""
    @timev

This is a verbose version of the `@time` macro. It first prints the same information as
`@time`, then any non-zero memory allocation counters, and then returns the value of the
expression.

See also [`@time`](@ref), [`@timed`](@ref), [`@elapsed`](@ref), and
[`@allocated`](@ref).

```julia-repl
julia> x = rand(10,10);

julia> @timev x * x;
  0.546770 seconds (2.20 M allocations: 116.632 MiB, 4.23% gc time, 99.94% compilation time)
elapsed time (ns): 546769547
gc time (ns):      23115606
bytes allocated:   122297811
pool allocs:       2197930
non-pool GC allocs:1327
malloc() calls:    36
realloc() calls:   5
GC pauses:         3

julia> @timev x * x;
  0.000010 seconds (1 allocation: 896 bytes)
elapsed time (ns): 9848
bytes allocated:   896
pool allocs:       1
```
"""
macro timev(ex)
    quote
        @compile
        local stats = gc_num()
        local elapsedtime = time_ns()
        local compile_elapsedtime = cumulative_compile_time_ns_before()
        local val = @__tryfinally($(esc(ex)),
            (elapsedtime = time_ns() - elapsedtime;
            compile_elapsedtime = cumulative_compile_time_ns_after() - compile_elapsedtime)
        )
        local diff = GC_Diff(gc_num(), stats)
        timev_print(elapsedtime, diff, compile_elapsedtime)
        val
    end
end

"""
    @elapsed

A macro to evaluate an expression, discarding the resulting value, instead returning the
number of seconds it took to execute as a floating-point number.

In some cases the system will look inside the `@elapsed` expression and compile some of the
called code before execution of the top-level expression begins. When that happens, some
compilation time will not be counted. To include this time you can run `@elapsed @eval ...`.

See also [`@time`](@ref), [`@timev`](@ref), [`@timed`](@ref),
and [`@allocated`](@ref).

```julia-repl
julia> @elapsed sleep(0.3)
0.301391426
```
"""
macro elapsed(ex)
    quote
        @compile
        local t0 = time_ns()
        $(esc(ex))
        (time_ns() - t0) / 1e9
    end
end

# total number of bytes allocated so far
gc_bytes(b::Ref{Int64}) = ccall(:jl_gc_get_total_bytes, Cvoid, (Ptr{Int64},), b)
# NOTE: gc_bytes() is deprecated
function gc_bytes()
    b = Ref{Int64}()
    gc_bytes(b)
    b[]
end

"""
    @allocated

A macro to evaluate an expression, discarding the resulting value, instead returning the
total number of bytes allocated during evaluation of the expression.

See also [`@time`](@ref), [`@timev`](@ref), [`@timed`](@ref),
and [`@elapsed`](@ref).

```julia-repl
julia> @allocated rand(10^6)
8000080
```
"""
macro allocated(ex)
    quote
        @compile
        local b0 = Ref{Int64}(0)
        local b1 = Ref{Int64}(0)
        gc_bytes(b0)
        $(esc(ex))
        gc_bytes(b1)
        b1[] - b0[]
    end
end

"""
    @timed

A macro to execute an expression, and return the value of the expression, elapsed time,
total bytes allocated, garbage collection time, and an object with various memory allocation
counters.

In some cases the system will look inside the `@timed` expression and compile some of the
called code before execution of the top-level expression begins. When that happens, some
compilation time will not be counted. To include this time you can run `@timed @eval ...`.

See also [`@time`](@ref), [`@timev`](@ref), [`@elapsed`](@ref), and
[`@allocated`](@ref).

```julia-repl
julia> stats = @timed rand(10^6);

julia> stats.time
0.006634834

julia> stats.bytes
8000256

julia> stats.gctime
0.0055765

julia> propertynames(stats.gcstats)
(:allocd, :malloc, :realloc, :poolalloc, :bigalloc, :freecall, :total_time, :pause, :full_sweep)

julia> stats.gcstats.total_time
5576500
```

!!! compat "Julia 1.5"
    The return type of this macro was changed from `Tuple` to `NamedTuple` in Julia 1.5.
"""
macro timed(ex)
    quote
        @compile
        local stats = gc_num()
        local elapsedtime = time_ns()
        local val = $(esc(ex))
        elapsedtime = time_ns() - elapsedtime
        local diff = GC_Diff(gc_num(), stats)
        (value=val, time=elapsedtime/1e9, bytes=diff.allocd, gctime=diff.total_time/1e9, gcstats=diff)
    end
end
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