https://github.com/stan-dev/stan
Tip revision: 20f907b85bf9ef33a875a400a3e4dce8ff5428a6 authored by Steve Bronder on 21 May 2021, 00:33:32 UTC
use no check return macro in deserializer and make a specialization for reading in scalar vectors
use no check return macro in deserializer and make a specialization for reading in scalar vectors
Tip revision: 20f907b
makefile
##
# Stan
# -----------------
#
# To customize your build, set make variables in either:
# ~/.config/stan/make.local
# make/local
# Variables in make/local is loaded after ~/.config/stan/make.local
## 'help' is the default make target.
help:
-include $(HOME)/.config/stan/make.local # user-defined variables
-include make/local # user-defined variables
MATH ?= lib/stan_math/
-include $(MATH)make/compiler_flags
-include $(MATH)make/dependencies
-include $(MATH)make/libraries
include make/doxygen # doxygen
include make/cpplint # cpplint
include make/tests # tests
include make/clang-tidy
INC_FIRST = -I $(if $(STAN),$(STAN)/src,src) -I ./src/
.PHONY: help
help:
@echo '--------------------------------------------------------------------------------'
@echo 'Note: testing of Stan is typically done with the `runTests.py` python script.'
@echo ' See https://github.com/stan-dev/stan/wiki/Testing-Stan-using-Gnu-Make-and-Python'
@echo ' for more detail on testing.'
@echo ''
@echo 'Stan makefile:'
@$(MAKE) print-compiler-flags
@echo ''
@echo 'Common targets:'
@echo ' Documentation:'
@echo ' - doxygen : Builds the API documentation. The documentation is located'
@echo ' doc/api/'
@echo ' (requires doxygen installation)'
@echo ' Submodule:'
@echo ' - math-revert : Reverts the Stan Math Library git submodule to the hash'
@echo ' recorded in the Stan library'
@echo ' - math-update : Updates the Stan Math Library git submodule branch,'
@echo ' e.g. if the Math branch is `develop`, it will fetch the'
@echo ' the latest version of `develop`'
@echo ' - math-update/<branch-name> : Updates the Stan Math Library git submodule to'
@echo ' the branch specified'
@echo ''
@echo 'Tests:'
@echo ''
@echo ' Unit tests are built through make by specifying the executable as the target'
@echo ' to make. For a test in src/test/*_test.cpp, the executable is test/*$(EXE).'
@echo ''
@echo ' Header tests'
@echo ' - test-headers : tests all source headers to ensure they are compilable and'
@echo ' include enough header files.'
@echo ''
@echo ' To run a single header test, add "-test" to the end of the file name.'
@echo ' Example: make src/stan/math/constants.hpp-test'
@echo ''
@echo ' Cpplint'
@echo ' - cpplint : runs cpplint.py on source files. requires python 2.7.'
@echo ' cpplint is called using the CPPLINT variable:'
@echo ' CPPLINT = $(CPPLINT)'
@echo ' To set the version of python 2, set the PYTHON2 variable:'
@echo ' PYTHON2 = $(PYTHON2)'
@echo ''
@echo ' Clang Tidy'
@echo ' - clang-tidy : runs the clang-tidy makefile over the test suite.'
@echo ' Options:'
@echo ' files: (Optional) regex for file names to include in the check'
@echo ' Default runs all the tests in unit'
@echo ' tidy_checks: (Optional) A set of checks'
@echo ' Default runs a hand picked selection of tests'
@echo ''
@echo ' Example: This runs clang-tidy over all the multiply tests in prim'
@echo ''
@echo ' make clang-tidy files=*prim*multiply*'
@echo ''
@echo ' - clang-tidy-fix : same as above but runs with the -fix flag.'
@echo ' For automated fixes, outputs a yaml named'
@echo ' .clang-fixes.yml'
@echo ''
@echo ' Clang Format'
@echo ' - clang-format : runs clang-format over all the .hpp and .cpp files.'
@echo ' in src.'
@echo ''
@echo 'Clean:'
@echo ' - clean : Basic clean. Leaves doc and compiled libraries intact.'
@echo ' - clean-deps : Removes dependency files for tests. If tests stop building,'
@echo ' run this target.'
@echo ' - clean-all : Cleans up all of Stan.'
@echo ''
@echo '--------------------------------------------------------------------------------'
##
# Clean up.
##
MODEL_SPECS := $(call findfiles,src/test,*.stan)
.PHONY: clean clean-demo clean-dox clean-models clean-all clean-deps
clean:
$(RM) $(call findfiles,src,*.dSYM) $(call findfiles,src,*.d.*)
$(RM) $(wildcard $(MODEL_SPECS:%.stan=%.hpp))
$(RM) $(wildcard $(MODEL_SPECS:%.stan=%$(EXE)))
$(RM) $(wildcard $(MODEL_SPECS:%.stan=%.o))
$(RM) $(wildcard $(MODEL_SPECS:%.stan=%.d))
clean-dox:
$(RM) -r doc/api
clean-deps:
@echo ' removing dependency files'
$(RM) $(call findfiles,./,*.d)
clean-all: clean clean-dox clean-deps clean-libraries
$(RM) -r test bin
@echo ' removing .o files'
$(RM) $(call findfiles,src/,*.o)
##
# Submodule related tasks
##
.PHONY: math-revert
math-revert:
git submodule update --init --recursive
.PHONY: math-update
math-update:
git submodule init
git submodule update --recursive
math-update/%: math-update
cd $(MATH) && git fetch --all && git checkout $* && git pull
##
# Debug target that allows you to print a variable
##
print-% : ; @echo $* = $($*)