https://github.com/sanger-pathogens/gubbins
Tip revision: 0dfe1234ef48c2808e9b80809ea962e87ec2054a authored by Nick Croucher on 31 October 2022, 05:28:42 UTC
Merge and improve clade analysis scripts
Merge and improve clade analysis scripts
Tip revision: 0dfe123
gff_file.h
/*
* Wellcome Trust Sanger Institute
* Copyright (C) 2012 Wellcome Trust Sanger Institute
*
* This program is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
*/
#ifndef _GFF_FILE_H_
#define _GFF_FILE_H_
void print_gff_header(FILE * gff_file_pointer, int genome_length);
void print_gff_line(FILE * gff_file_pointer, int start_coordinate, int end_coordinate, int number_of_snps, char * current_node_id, char * parent_node_id, char * taxon_names, double neg_log_likelihood);
#endif