https://github.com/sanger-pathogens/gubbins
- HEAD
- refs/heads/149_no_filter_dups
- refs/heads/JAR
- refs/heads/alignment_updating
- refs/heads/c_mem
- refs/heads/conda_patch
- refs/heads/fix_installation
- refs/heads/fix_tests
- refs/heads/fixdocker
- refs/heads/gh-pages
- refs/heads/hpc_fix
- refs/heads/improve_scripts
- refs/heads/improve_testing
- refs/heads/jdaeth274-josh_merging_branch
- refs/heads/masking_aln
- refs/heads/master
- refs/heads/new_ska2
- refs/heads/numpyjar
- refs/heads/raxml_reconstruction
- refs/heads/rec_per_gene
- refs/heads/star_fix
- refs/heads/time_tree
- refs/heads/update_rec
- refs/tags/0.1.10
- refs/tags/0.1.11
- refs/tags/0.1.6
- refs/tags/0.1.7
- refs/tags/0.1.8
- refs/tags/0.1.9
- refs/tags/0.2
- refs/tags/0.6
- refs/tags/0.7
- refs/tags/1.0.9
- refs/tags/v.1.4.5
- refs/tags/v0.3
- refs/tags/v0.4
- refs/tags/v0.4.1
- refs/tags/v0.5
- refs/tags/v0.6
- refs/tags/v1.0
- refs/tags/v1.0.1
- refs/tags/v1.0.10
- refs/tags/v1.0.11
- refs/tags/v1.0.12
- refs/tags/v1.0.2
- refs/tags/v1.0.5
- refs/tags/v1.0.6
- refs/tags/v1.0.7
- refs/tags/v1.0.8
- refs/tags/v1.0.9
- refs/tags/v1.1.0
- refs/tags/v1.1.1
- refs/tags/v1.1.2
- refs/tags/v1.2.0
- refs/tags/v1.2.1
- refs/tags/v1.2.2
- refs/tags/v1.2.3
- refs/tags/v1.2.4
- refs/tags/v1.3.0
- refs/tags/v1.3.1
- refs/tags/v1.3.3
- refs/tags/v1.3.4
- refs/tags/v1.4.0
- refs/tags/v1.4.1
- refs/tags/v1.4.10
- refs/tags/v1.4.2
- refs/tags/v1.4.3
- refs/tags/v1.4.4
- refs/tags/v1.4.5
- refs/tags/v1.4.6
- refs/tags/v1.4.7
- refs/tags/v1.4.8
- refs/tags/v1.4.9
- refs/tags/v2.0.0
- refs/tags/v2.1.0
- refs/tags/v2.2.0
- refs/tags/v2.2.1
- refs/tags/v2.2.2
- refs/tags/v2.2.3
- refs/tags/v2.3.0
- refs/tags/v2.3.1
- refs/tags/v2.3.2
- refs/tags/v2.3.3
- refs/tags/v2.3.4
- refs/tags/v2.3.5
- refs/tags/v2.4.0
- refs/tags/v2.4.0-docker2
- refs/tags/v2.4.1
- refs/tags/v3.0.0
- refs/tags/v3.1.0
- refs/tags/v3.1.1
- refs/tags/v3.1.2
- refs/tags/v3.1.3
- refs/tags/v3.1.4
- refs/tags/v3.1.5
- refs/tags/v3.1.6
- refs/tags/v3.2.0
- refs/tags/v3.2.1
- refs/tags/v3.2.2
- refs/tags/v3.3
- refs/tags/v3.3.0
- refs/tags/v3.3.1
- refs/tags/v3.3.3
- refs/tags/v3.3.4
No releases to show
Raw File 
Take a new snapshot of a software origin
If the archived software origin currently browsed is not synchronized with its upstream version (for instance when new commits have been issued), you can explicitly request Software Heritage to take a new snapshot of it.
Use the form below to proceed. Once a request has been submitted and accepted, it will be processed as soon as possible. You can then check its processing state by visiting this dedicated page. Processing "take a new snapshot" request ...
Permalinks
To reference or cite the objects present in the Software Heritage archive, permalinks based on SoftWare Hash IDentifiers (SWHIDs) must be used.
Select below a type of object currently browsed in order to display its associated SWHID and permalink.
Tip revision: f571b771f2604339d795fcfe6a90c6438a085190 authored by Nick Croucher on 01 December 2023, 13:14:37 UTC
Enlarge logo
Enlarge logo
Tip revision: f571b77
one_recombination.tre.expected.gff
##gff-version 3
##sequence-region SEQUENCE 1 135
SEQUENCE GUBBINS CDS 63 167 0.000 . 0 node="N5->sequence_2";taxa="sequence_2";snp_count="103";
