https://github.com/lucventurini/mikado
Raw File
Tip revision: eacd9173ed52828b8eda7d377e92fefb9f6bf040 authored by Luca Venturini on 06 November 2018, 14:37:53 UTC
Updated documentation (#136), tests (#137) - including the daijin test, solved some minor bugs present in earlier commits, indicated the EICore repo as the main in the docs, now #141 should be ready to be closed
Tip revision: eacd917
requirements.txt
wheel>=0.28.0
pyyaml
jsonschema
cython>=0.25
numpy
networkx>=1.10
sqlalchemy>=1
sqlalchemy_utils
biopython>=1.67
intervaltree
nose
pyfaidx
scikit-learn>=0.17.0
scipy>=0.15.0
frozendict
python-magic
drmaa
snakemake<4.0.0; python_version < "3.5"
snakemake; python_version >= "3.5"
docutils!=0.13.1
tabulate
ujson
simplejson
typing; python_version < "3.5"
pandas
back to top