https://github.com/lucventurini/mikado
- HEAD
- refs/heads/attributes_metric_docs
- refs/heads/bugfix-1.2.4
- refs/heads/bumpversion
- refs/heads/fix-configure
- refs/heads/fix-v2.1.2
- refs/heads/hot-fix-configure
- refs/heads/issue-136
- refs/heads/issue-259
- refs/heads/issue-270
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- refs/heads/issue-353
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Tip revision: 6e4a2c99655cb6e0d95418a118e13ac08d436e84 authored by Luca Venturini on 22 March 2019, 16:05:14 UTC
This commit should fix the problem of retrieving attributes such as external.score from Transcript objects WITHOUT slowing down the whole application.
This commit should fix the problem of retrieving attributes such as external.score from Transcript objects WITHOUT slowing down the whole application.
Tip revision: 6e4a2c9
requirements.txt
wheel>=0.28.0
pyyaml
jsonschema
cython>=0.25
numpy>=1.16.0
networkx>=2
sqlalchemy>=1.3
sqlalchemy-utils
biopython>=1.70
intervaltree
pytest
pyfaidx
scikit-learn>=0.17.0
scipy>=1.0.0
frozendict
python-magic
drmaa
snakemake
docutils!=0.13.1
tabulate
ujson
simplejson
pandas
pytest-cov
pysam >= 0.15.1