https://github.com/lucventurini/mikado
- HEAD
- refs/heads/attributes_metric_docs
- refs/heads/bugfix-1.2.4
- refs/heads/bumpversion
- refs/heads/fix-configure
- refs/heads/fix-v2.1.2
- refs/heads/hot-fix-configure
- refs/heads/issue-136
- refs/heads/issue-259
- refs/heads/issue-270
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- refs/heads/issue-353
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Tip revision: cee5cc437cc749f8ec12a551509ebc1ce2f8639c authored by Luca Venturini on 16 November 2018, 16:58:22 UTC
Numpy pytester is not stable. Sticking with nosetests for Mikado.test()
Numpy pytester is not stable. Sticking with nosetests for Mikado.test()
Tip revision: cee5cc4
requirements.txt
wheel>=0.28.0
pyyaml
jsonschema
cython>=0.25
numpy>=1.15.0
networkx>=2
sqlalchemy>=1
sqlalchemy_utils
biopython>=1.70
intervaltree
nose # for numpy tester
pytest
pyfaidx
scikit-learn>=0.17.0
scipy>=0.15.0
frozendict
python-magic
drmaa
snakemake
docutils!=0.13.1
tabulate
ujson
simplejson
typing; python_version < "3.5"
pandas
