wheel>=0.28.0
pyyaml
jsonschema
cython>=0.25
numpy
networkx>=1.10
sqlalchemy>=1
sqlalchemy_utils
biopython>=1.70
intervaltree
pytest
pytest-cov
pyfaidx
scikit-learn>=0.17.0
scipy>=0.15.0
frozendict
python-magic
drmaa
snakemake<4.0.0; python_version < "3.5"
snakemake; python_version >= "3.5"
docutils!=0.13.1
tabulate
ujson
simplejson
typing; python_version < "3.5"
pandas