https://github.com/cran/gap
Raw File
Tip revision: d19cac44fcfb152fd7b91a234873ba64c706a5c6 authored by Jing Hua Zhao on 19 April 2017, 10:10:23 UTC
version 1.1-17
Tip revision: d19cac4
MD5
9fd0c66a1eaa554c4e8b332d58048fa1 *ChangeLog
abe08636425184e3edfe8dc845865756 *DESCRIPTION
a3b2a7c9a735012be9513700d8aaff35 *INDEX
ed4d732eb8b6ffd9fe0304e88fad01aa *NAMESPACE
673ea57dcaf6e14881123554d63e86be *R/2ld.R
997a1646478337b8db74de26f14c6871 *R/AE3.R
aa5f6d41194e60fde5a03ea3285ceef5 *R/BFDP.R
e4a4b392896bedafb8f20eb004d4f37d *R/ESplot.R
8c2f05558d926be4e0445cc290145e1b *R/FPRP.R
f650a85d818bcf46101552778933932c *R/KCC.R
da63e2c13a25276b9762230264c7e53a *R/MCMCgrm.R
ddf593c279446f385546fcbf643d5bf1 *R/SNP.R
31e4343c6dfd122baec0afd1ed79c7c1 *R/ab.R
56272e78e668a9eb4b5f75b403546065 *R/asplot.R
7edae0f33c967824230ed4d5bfd7f69a *R/b2r.R
57dac4f906147341f60b00a4fbdb68b7 *R/bt.R
ff5859ccccb0ced358c8879d9eeabc41 *R/ccsize.R
a58cd877c2ba28b8f0d862af0e129603 *R/chow.test.R
aa4ec551b672e6c94bfcb125da31950d *R/comp.score.R
94985dbfc0d553c5040d299ed2204795 *R/fbsize.R
a6c44a24904dfb7a292a7a13054bf354 *R/gc.em.R
92ef55f53bf2c394b5a1fbb875044e90 *R/gcontrol.R
2c54aa8e5c229bf6eb7e24c240855aa3 *R/gcontrol2.R
4d79ce96ba4802f6d920020337f9a5f0 *R/gcp.R
391ab0bec5cdcb20c81aff74600a089b *R/genecounting.R
7b3d5380913cb2be6dacf655f1cbb4f5 *R/gif.R
ea0604b89afe60cf3c0b38e49659c1af *R/h2.R
095e3418d29b9af445bdeb58e5a24380 *R/hap.R
2fb2cc2cc7ec411f480a57a1914c51e7 *R/hap.em.R
c52f1f99fb720aab0a768d6c09257e47 *R/hap.score.R
f5964b477c84206f0836b09c4e8e2634 *R/hapfun.R
73fc1ebdcb2efb0502a043be75cfad2d *R/htr.R
601418f8af5576e9da1ae370f5c28b82 *R/hwe.R
07803e4cda7bdd134f43ac04a2be163b *R/hwe.cc.R
23d0b5a487abad291a30640d5d24e83f *R/hwe.hardy.R
c7afd9a047a536176bb04f261bfce1d0 *R/kin.morgan.R
a82a3a3ce7e6f72a8ba1fc190556148e *R/makeped.R
c7777325f24e070e1668c0f0f86a465e *R/masize.R
bf0030dd7d6addf36741313a15114997 *R/metap.R
cc4b37592f57713bb636690730af65f9 *R/metareg.R
727e55a9f7311545796c93dd87b488e5 *R/mhtplot.R
c5d98777cbcebd6679ecdbd8425c709e *R/mhtplot2.R
3b6dab758ca777db834b0a8edea76880 *R/mia.R
21d6f0bf3beb491c40ba9caa93b08eee *R/mtdt.R
b4af13a3c4b7ce2e00583a989d250fea *R/mtdt2.R
0daa233657d777d9b73dd0cb0032c232 *R/muvar.R
b9538f13b98fecd0da80c89ea1365d6b *R/mvmeta.R
755ee00942f82d05d97bef3b8aef7d72 *R/onload.R
cefb401a2c860a2a62230205e4523dbb *R/pbsize.R
383313a256d55787f6f4118006f49c17 *R/pbsize2.R
d1e5a4952fbac3bbffb41ab7382f0c6a *R/pedtodot.R
faf3e2bb50c7dd8e0b1f74ee970513e1 *R/pfc.R
5e348fb9e2e9ed0f9a01a379cda7b32e *R/pfc.sim.R
ad0a46cedea7d367b8f3214044ea2868 *R/pgc.R
95a3f6104713395d533a1dfe177fb385 *R/qqfun.R
9656e0699fec075d203772cf48c9ff75 *R/qqunif.R
ef82501223aaa2f905aa163050b2922a *R/read.ms.output.R
4aada799530f774f4b875148509c6968 *R/s2k.R
d07cf475009645156b2f6d4121016723 *R/tscc.R
ff07ea2105bd447edcc689d04729c403 *R/utils.R
1c9c0495f0df92425e0f5259c3ac9153 *R/whscore.R
56c3b68cfb3572d8f9ff37adc6b99803 *build/vignette.rds
433d17d4c622a8a14e3745936cd5dabf *data/CDKN.RData
7bd3aedd75650967cecc91f4286d2cdc *data/PD.rda
3f3aa5fe17484a97dfef4cafeeb8ce37 *data/aldh2.rda
9d15248c5fee244053a00abcf98688e6 *data/apoeapoc.rda
db3cd3db5cec2e96aa08ed60aa4b0e2d *data/cf.RData
e9fdf75f37ecb36778fb82e00a490a27 *data/crohn.RData
4d5a50fa54cb5a4abb8c791aa6b735e1 *data/datalist
8a6653d3ba45617ccbd10cfce5d03170 *data/fa.RData
13cb34c51f8dc894d3e1a296ddb4e9b4 *data/fsnps.RData
e1487efcc984262d8a6ebdf03e66264f *data/hla.rda
72ae67bff24c18178187b7ac4b5bb64c *data/hr1420.rda
30c9b7fe07f854c587ad58a7d172bb78 *data/l51.rda
3e0c814c03defd8a3133aee0959200e2 *data/lukas.rda
a1cb032c7ef1a44e298054ca43279844 *data/mao.RData
3fb4a45b19a2041d6592fa96b4ce2c32 *data/meyer.rda
9c20accbf37051e78709003f80e333d2 *data/mfblong.rda
0cf8b19527d498d738bdd95830dd2414 *data/mhtdata.RData
9b650da1b41170556420f13a9ed93a41 *data/nep499.RData
a4472a8987aca674719357576b31a2ca *demo/00Index
9d383a96e9dc840aa3ae46195501c82f *demo/gap.R
f97442a488052ef8ad2986c54159e0d4 *inst/CITATION
fc887faf5a928b2b75099e3badb9c138 *inst/doc/gap.R
11d4660e47b2ffb75571d8232aab20d7 *inst/doc/gap.Rnw
6a8e820e028a98798bc25d4e49ffb5fd *inst/doc/gap.pdf
c5df70ec5669dc0a3118e48db1a4ce10 *inst/doc/h2.Rnw
d95ba1c3ee49b45ea08a85c9ef8c3f85 *inst/doc/h2.pdf
dbe7d671a4382c1d5ee2b9aaaa1f8247 *inst/doc/jss.Rnw
4c2f2b691f8acbaac9e71ae797f67e41 *inst/doc/jss.pdf
57f303f8defcb1cbf731da97f657e43a *inst/doc/pedtodot.R
c9c178e7ebdb5a9074bf2e4eb5343ace *inst/doc/pedtodot.Rnw
bb762ba30056b709cc4d3d9210a96981 *inst/doc/pedtodot.pdf
77b73fe65f5571def39a5e48a585023f *inst/doc/rnews.Rnw
9a4dfbc5d863ba11bc613720f73a3c2c *inst/doc/rnews.pdf
027f938b01c3ddd8a365799555a5de21 *inst/tests/2ld/2by2.dat
fe5af1a438bf0433e09a7b69bf03419b *inst/tests/2ld/2ld.c
e6ac81ebe61fa00c5eded712a6f8c223 *inst/tests/2ld/2ld.txt
1b64778fb95e5f37d3b0823cc1a8e3d9 *inst/tests/2ld/bench.bas
2252924e12b0cb4de0c77b732c4e3081 *inst/tests/2ld/bench.dat
77a2faa6ae5af96870567cc1f6335f85 *inst/tests/2ld/genotype.dat
67dbd8577715d08f1c3e05a21336379d *inst/tests/2ld/genotype.eh
d2d7cd98b0a09026fa997ee2380fe148 *inst/tests/2ld/genotype.tab
3be6439e5a8e86d6e0aee4ca8d671f83 *inst/tests/2ld/kbyl.dat
45c2ed0bee9e417592fb1e46723c5729 *inst/tests/OpenMx/ACE.R
90ca6f92e1d28edb2dbb8f31002d1b96 *inst/tests/OpenMx/install.R
b47717ab2ff246572f09550d3e8bf3dc *inst/tests/R/MR.R
22789887ee7ae10635db48fd42e17850 *inst/tests/R/R2.R
3cb66e2668d2e88e9e05503ce8644fef *inst/tests/R/renum.R
bda16cc379512031b6698117591583bd *inst/tests/R/test_data.rda
c5282890ab4365fb919f683130689b67 *inst/tests/README.txt
5fdc1cf7ad06fdfcb008b2b5600ca76f *inst/tests/chrsim/cs.c
2d96cd96e0f00d582971b1539c408e76 *inst/tests/chrsim/cs.dat
b48412ce2b0e7cb1938c7fe84c50d00d *inst/tests/chrsim/cs.par
44cb9d4ff651c20c907dc7984a4242ad *inst/tests/chrsim/simulate.c
922d35ffb9ca1e2b2aae26c194adefa8 *inst/tests/comp.score/gh.inp
ded13a3341ba49a70ea4401d42913cf6 *inst/tests/comp.score/ibd_dist.out
6c2f575f68afb6bfa9ef0e9e5aca4fcd *inst/tests/comp.score/linkloci.dat
51f60140a10fb5443273a8c282a752e3 *inst/tests/comp.score/linkped.pre
5eb56e0656eac7042739a6530ee3e532 *inst/tests/comp.score/pheno.dat
d6b9d3de4de6e20cbc75d8504a8f7767 *inst/tests/ehp/Makefile.osf
97841c49e7213184c6a398b302d1aeeb *inst/tests/ehp/case.dat
ec3c5c64ca557c1f32745532ee48c9a7 *inst/tests/ehp/changes
977e73b2ba0413a119f2979f4c52a478 *inst/tests/ehp/control.dat
f20df3f1d9c1d0f570bc5fea4e60d82d *inst/tests/ehp/eh.c
92e98202e9ada7b6ec2add0373532eae *inst/tests/ehp/eh.dat
8bc1716ae5b9cd91d59b6b9dbde5eaf0 *inst/tests/ehp/ehplus.c
75c6ad8946216a743567a2b55c16ec5d *inst/tests/ehp/ehplus.dat
2dee0b2b50ba6bcbdcb809a143d9a826 *inst/tests/ehp/ehplus.pas
cd895a14ce84215dc6a625b8cc84f8f9 *inst/tests/ehp/ehplush.c
a23cc833aba2f00ec38b2894b7c33244 *inst/tests/ehp/ehplush.pas
16b6cc55976732fd720a1caed699f858 *inst/tests/ehp/example.dat
3b5e777c897f1353ebec8e71c3627535 *inst/tests/ehp/example.par
982a1b74b313756ebb7cd18a1e02c3b6 *inst/tests/ehp/fehp.c
f0c01d9eb1e0257d3a398110af73171c *inst/tests/ehp/fehp.h
6cf17d83fe0f39adef8904a01de37b79 *inst/tests/ehp/hla.dat
7ea5d9ed08459a28ccf62c9527b4e61b *inst/tests/ehp/hla.par
d03b9f1f717e1bc3c364e0f483d77b7d *inst/tests/ehp/htr.R
a4706bccbb369977584f8668ea51cadf *inst/tests/ehp/mm.dat
eb05fee922ceee922b1d13a5cc9efa08 *inst/tests/ehp/mm.par
f6521526bc90b30a5039403d692758d4 *inst/tests/ehp/pm.c
da10bcfe871552633313c058b68b4a3e *inst/tests/ehp/pm.doc
cb4f444223cb759be5583d93646b270f *inst/tests/ehp/pm.stm
d24f7e27aa62e0c7524b977893e755f2 *inst/tests/ehp/pmplus.c
01fff857def3466ccc163d9b81833ffe *inst/tests/ehp/readme.txt
9adea99d1d8dcc83fcd74f124945c199 *inst/tests/fehp/COPYRIGHT
2eeff81940a0fdb70ea968aed4c4d55d *inst/tests/fehp/aldh2.dat
e15fc569835b6fca29bd0662f0c161e4 *inst/tests/fehp/aldh2cc.par
ce5ce35304abebf275b2f41e1f9bb8dd *inst/tests/fehp/aldh2mm.par
982a1b74b313756ebb7cd18a1e02c3b6 *inst/tests/fehp/fehp.c
f0c01d9eb1e0257d3a398110af73171c *inst/tests/fehp/fehp.h
6f217fbc3f04db393374dd16913ecc39 *inst/tests/fehp/fpmp.c
3b1804708e66a85dbef2e87cf41715e1 *inst/tests/fehp/fpmp.doc
de34e7d6708098523c1607dcb1bbc046 *inst/tests/fehp/fpmp.h
f8c5d4cbbb23aa417dc6f6d72f12aa29 *inst/tests/fehp/fpmp.pdf
804c21a5068d053ff01d8cb5209b476e *inst/tests/fehp/fpmp.tex
4313cc5c8e87bc8959698c0826a195ad *inst/tests/fehp/makefile
1f5ccdfa27beb591120cd4cddc686dc0 *inst/tests/fehp/pfehp.c
35e4bb6162e77849d06473909db95e95 *inst/tests/fehp/pfehp.h
c8772a21c0a02a33a94014b498004557 *inst/tests/genecounting/4snps.4m
35aa43a419b09feb70acf7e343f8c736 *inst/tests/genecounting/4snps.dat
481d733915e64d846878dccb6136f13d *inst/tests/genecounting/4snps.inp
2f43f00b832aab8b11ef8503b0127cd5 *inst/tests/genecounting/4snps.par
8810e0d3621fac07421c2f014bdd3642 *inst/tests/genecounting/changes
75e48cb1e7d80654e184091e78034dcd *inst/tests/genecounting/gc.c
c128d282a3df227bc13a3f3ac5fa13c4 *inst/tests/genecounting/gc.pdf
1c9713d18ec0bc1a219d4dab7e003a6f *inst/tests/genecounting/gc.tex
493a6b8224a279a2291aed3035a6f5cf *inst/tests/genecounting/gc.txt
9159592547509f3ee8343cbd0a838f04 *inst/tests/genecounting/gcp.c
f68f5dbb81b55ecaf4e4feb60225362e *inst/tests/genecounting/gcx.c
ec43d1db628241c296ac53d6b090ce2e *inst/tests/genecounting/hla.dat
61c2d997cbf625b2fbe550565ec010a1 *inst/tests/genecounting/hla.par
7f226e89a7bc061f6739e1d8290e1957 *inst/tests/genecounting/mao.dat
14be36a78a82798aa610ed6303ea4a7e *inst/tests/genecounting/mao.inp
cad05eadecf61ad7d8c34c32e4866529 *inst/tests/genecounting/packing.lst
b3da78e39933f4e12edc7eabe96d7622 *inst/tests/genecounting/pgc.c
b175079f84863150f5c8c23781dd07a5 *inst/tests/genecounting/pgc.h
9b6291dc019b537e99067a9afc239d99 *inst/tests/h2/R2.R
b49130852b32edc672c4d75909fe2e30 *inst/tests/h2/R2.do
43dbe8bb50d08105c3817dfea4f6f9a1 *inst/tests/h2/bootjack.sas
351f752f1553cd32c2c6a875f271820b *inst/tests/h2/ddjack.do
3895a8e6874a5dbba417409fa003a34f *inst/tests/h2/ddjack.sh
4b060da15e5e8e4a5b063d8228e27f85 *inst/tests/h2/figures.R
05b0c20e144294a050cc005b214b33a3 *inst/tests/h2/ggmap.R
aed99a8cdc9f309c99c52bebde16dfd8 *inst/tests/h2/h2GE_bmi.R
e3eb3361660bcdd92cfea7f7ca8e46d5 *inst/tests/h2/map.R
15a162be00ac37229710e828e85a16df *inst/tests/h2/map.csv
1a30a960323b58df3fba5b57eaa2fc92 *inst/tests/h2/mvmeta.R
f33e7af75d44eb32b649e179437aa697 *inst/tests/h2/mvmeta.do
c059c04a171ec4daa7a9f11ed0f2e6fc *inst/tests/hap/4snps.4an
da2a586a792bef36a3980952c7b4b0ab *inst/tests/hap/4snps.an
7eae1f14e2ff9e471af07a13a5a76b03 *inst/tests/hap/4snps.dat
2bd50dd10e6c3bc008563ceeaba6376b *inst/tests/hap/Makefile
7b21a939d161dc6ca322341ad056a063 *inst/tests/hap/Makefile.vc
524d986d3a933eca45d8053c39680f7f *inst/tests/hap/cline.c
ed9fd2298e95965d3417b88ba680702b *inst/tests/hap/cline.h
ba327fb767407ef313dc1870b938b388 *inst/tests/hap/hap.c
b4be95d4f85725fa9dc786537e20e26d *inst/tests/hap/hap.h
969b42cd6d54b68e245ad48e1a2aa489 *inst/tests/hap/hap.txt
112777468740b6f01555e6c5b035e122 *inst/tests/hap/hapfun.c
c53df95b7142401462caf9e80a5a4e55 *inst/tests/hap/mia.c
410e2f4a71629f6a21a51502fc245a42 *inst/tests/hap/test.dat
0904051ca40cef0ce1224747a001041c *inst/tests/haplo.stats/PD.R
19aa087947b1e6610358c7fdeb392c44 *inst/tests/kinship/bdsmatrix.R
05198c129e017d889245c82a89e01955 *inst/tests/kinship/gaw14.c
a718d771d3d21f2157c52101cbc15342 *inst/tests/kinship/gaw14.h
aed64302f6e17b4fc4dc374807a01d2d *inst/tests/kinship/gaw14frq.c
a17549c9729005a59f492509bd07047a *inst/tests/kinship/gcta.R
4a8a034178f51758578bf2d4ddaba944 *inst/tests/kinship/gcta.sh
0d6f3aeb89408b28ee946340f9bd6eda *inst/tests/kinship/gdef.h
85704532a69ee3ebade4fc741b7ea7bf *inst/tests/kinship/h2.R
5eecefbb31f5a7ad6be2f98a2bb554f4 *inst/tests/kinship/kin.c
fbb9972257cd328f5824e20a0ef8fb83 *inst/tests/kinship/kindrv.c
86ac191dccd6e7ea3a72a758bbc5ca36 *inst/tests/kinship/l51.R
23b3bf1423617cdee5260d0440de98d2 *inst/tests/kinship/l51.sas
c5da0dbc8f50488acf5af4c70add4116 *inst/tests/kinship/nghds.h
e9b3b32203bc1b0efe6ba8681c9f8ce1 *inst/tests/kinship/nshd.R
1bddb5152449e4daa4a530ff8934ebc4 *inst/tests/kinship/nshd.dat
1be4abb8b0daca4086104eec2223d488 *inst/tests/kinship/ped.1.3.pre
0ce5702a253bac4908ef19ac7fe79f53 *inst/tests/kinship/ped7.lop
9b8c94256711b25bc2d3495853e7a290 *inst/tests/kinship/ped7.pre
7845cbcd53727801c8a04eb8715121c2 *inst/tests/kinship/pedtodot.sh
6459a4d761be7569eb6f3171fcb6bc38 *inst/tests/kinship/readme
4c875a30f456165c0ddf26845c910f62 *inst/tests/kinship/setup.R
e3a46a83576301856eaf7d94678c33d2 *inst/tests/kinship/solar.R
6ecd03080401916f86ab8dd94c373acb *inst/tests/kinship/solar.sh
b6b728f472d68d364d7d781d49828ec7 *inst/tests/kinship/werner.kin
d8f51824caf91ebb49e29cc633d2807b *inst/tests/kinship/werner.pre
44406fd9f3e3c0bf6ed4af3b865beca8 *inst/tests/klem/SH2B1.R
687f95a77d492ad0c3a684083ff5ae15 *inst/tests/klem/SH2B1.txt
1435f854984d55fc4a0af21d8b7ec3a8 *inst/tests/misc/rm.c
314ff54b6d3cc9a08011d1949387190d *inst/tests/misc/tidy.R
84f48cc3976e173c7ff29b76f0c673dc *inst/tests/ms/clms
5ae1af1445c95f5e9718070f277a7259 *inst/tests/ms/ms.c
eafafa8fa89edef1f0bcaffa3acf26b0 *inst/tests/ms/ms.h
215af301f356657fc5c4f1c6e5406769 *inst/tests/ms/msdoc.txt
94d884d9da58ce8d37a4ec52a8780304 *inst/tests/ms/rand1.c
ee8b64743432b4cdeb7ddd6c496ba831 *inst/tests/ms/rand2.c
a8d9ded6ad8411ef1b262993eafd0a45 *inst/tests/ms/streec.c
0ca0416e620b9183609fcfe0abd00a38 *inst/tests/ms/www
4a15fba1f90be2b702703a7bb8f549e4 *inst/tests/no
316887c57e285405e98ba98b1a9b21d2 *inst/tests/references.txt
aadee77ad50f004d89ab38f72096cb78 *inst/tests/sas/metareg.sas
b8e835f9ca73daeb80b315314be04f0d *inst/tests/sas/mtdt.sas
64ff36a858355f03b1a41e273cadd2ba *inst/tests/sas/sas_snphwe.sas
c1cdefe00fc70de1b8423e88f9b45de6 *inst/tests/sas/sasgwa.sas
c37f3ffc2660b9d2a5c1291e40e2d6b8 *inst/tests/sas/sasgwa.txt
5e8f6777fb2096ad9f412cb64c763785 *inst/tests/sas/snphwe.c
ba2ad98044222e7235495d44e75b4a4c *inst/tests/sas/snphwe.sas
c551fc9130d724baa65185c25d2976b5 *inst/tests/sas/snphwe.sh
d27c71e281561e9ada266e3c3bb5635c *inst/tests/sim/Makefile
e01b362ce4f7e93decb9919b7ae8c793 *inst/tests/sim/doc/sim.pdf
32a5bd5391a27eef167d2d44f689e0aa *inst/tests/sim/doc/sim.tex
6a851d2efd2ab2a514b532e65b122fb1 *inst/tests/sim/include/func.h
8d111c4d7111fc8e0f0c065037dc28a5 *inst/tests/sim/include/locus.h
c57ff9fc7aae4a5cd95cf325cd2272fc *inst/tests/sim/include/nrutil.h
07a198d05d6d8ecf8e4c37d9a9efb90e *inst/tests/sim/include/person.h
6c3203f1ff8db35fd0397dd9ab0901c9 *inst/tests/sim/include/sim.h
c7866b5f6841bd7f824f895a954bd7c3 *inst/tests/sim/ranlib/Makefile
00986aee4adf4d1027d1e4e851a09d13 *inst/tests/sim/ranlib/README
c224164e7e7c96506b39bb56cfc6be98 *inst/tests/sim/ranlib/doc/Basegen.c.doc
6112e8086fb47469f2821dd3ecb62e30 *inst/tests/sim/ranlib/doc/ranlib.c.chs
78da9a7e2499ae8fa5f2096f50943b55 *inst/tests/sim/ranlib/doc/ranlib.c.fdoc
22534d167b3515d55f0f361f859c2eb4 *inst/tests/sim/ranlib/linpack/linpack.c
1bc389d4eb21e36732e38d298a4b93f1 *inst/tests/sim/ranlib/ranlib.h
3a7615b8b8f3ed6b2fe77e715b7c566f *inst/tests/sim/ranlib/src/com.c
5508edb0a90c3362815ed0095c754313 *inst/tests/sim/ranlib/src/ranlib.c
d4793dfd376715b871df290d843b6e43 *inst/tests/sim/ranlib/test/genmul.c
985e3c897137053c3ab4b2bd4b216682 *inst/tests/sim/ranlib/test/ranlib.h
917eded928b63197b3b3915d930e31cb *inst/tests/sim/ranlib/test/sim.c
1b719302906a6d7e4682c5d5cf1dd29c *inst/tests/sim/ranlib/test/tstbot.c
3ca3bc95ddf5a87ee66763af478e2c0c *inst/tests/sim/ranlib/test/tstgmn.c
bd49c48a92c3e6cb0c4c4cf2334ab7d8 *inst/tests/sim/ranlib/test/tstmid.c
a80e7c2fe2dd01d9e027544d033b5e94 *inst/tests/sim/samples/diseq.dat
583124c1f7ea3602169c7bd6c210a1a4 *inst/tests/sim/samples/diseq.loc
943a26eb43340612caefa20b28185521 *inst/tests/sim/samples/loc.tst
11fb66b479226319d25de428166bbdb5 *inst/tests/sim/samples/ped.ped
b7e8f221b490cade3b09e9f0602cd905 *inst/tests/sim/samples/ped.tst
9bc2172b4438859442cda4004bf01141 *inst/tests/sim/samples/problem.dat
42dbb26f6cb59355708fec26f5a13063 *inst/tests/sim/samples/sim_loc.tst
280f58bbd786c7bc36a683709a3eac9a *inst/tests/sim/samples/sim_ped.tst
9250e85a4884f1b72a7e1820c461c8f7 *inst/tests/sim/src/diseq.c
0541ae8741e7d9137153e8274a76baa2 *inst/tests/sim/src/getsize.c
62d55f000e865364ccafe55aff5c7a9e *inst/tests/sim/src/locprep.c
45455526fbd06771ad6f518dbbfc17fe *inst/tests/sim/src/nrutil.c
a5bf4c37046e0deef350460fa720b8b1 *inst/tests/sim/src/outped.c
d7c27b271d8abafdcaea1440726c58d6 *inst/tests/sim/src/simmain.c
200e3ddfb95c08f98e3def80c95d65a1 *inst/tests/sim/src/simped.c
1e63fbab766652b7d761b9bda8373f38 *inst/tests/stata/connect_to_mysql.c
fa74f98f3080f5368817eedf880c1f16 *inst/tests/stata/connect_to_mysql.do
238fd954446af260f1f56e31e45f0b9b *inst/tests/stata/stata_snphwe.c
75184580f4c8efd951faf387a3e1b350 *inst/tests/stata/stata_snphwe.do
064cf6b8bf8a670ed6bd789f3fd1f460 *inst/tests/stata/stata_snphwe.sh
56bcedf4fa79ef56ad3dc2ef6d272020 *inst/tests/twinan90/bwt.dat
163d3f703bd7878b66068cf9e12a849a *inst/tests/twinan90/bwt.in
94fe0fed2b652240825c42550b790787 *inst/tests/twinan90/mzdz.dat
8c0314450224e3206e989b87fae2fe2a *inst/tests/twinan90/twinan90.R
7bb9db9ade559a49fcc99141de0d49c9 *inst/tests/twinan90/twinan90.Rd
f88885edb601c2b34f67eb378b357306 *inst/tests/twinan90/twinan90.f
d9e5225a0c68c4e908b970cbd60c632f *inst/tests/twinan90/twinan90.for
08dd64070ccb9eb83b5c274b156a995b *inst/tests/xls/BFDP.xls
ec36ea9267f5517534eda16d67f272cd *inst/tests/xls/FPRP.xls
13f53cc82fd26266cdc7947b79df90b9 *man/AE3.Rd
e00b21be36d44fd6fc6a6ea6fec10d11 *man/BFDP.Rd
c66efe207ffca722165fcae3c75af963 *man/CDKN.Rd
180dc15cf449445dd3d7e1e348d7d8f1 *man/ESplot.Rd
dfb9f1450ea5f74730b4ab17326a5b16 *man/FPRP.Rd
84ff7980802a4024eebbd25c8880fb87 *man/LD22.Rd
cbe52eb1f3f72e2cc78d39c3070cbb82 *man/LDkl.Rd
e87fbc5495feb8f9365a4f055f9ae5c1 *man/MCMCgrm.Rd
764e133b3d08b86fcdfeb15cea3cce02 *man/PD.Rd
381b8534f13c43313ef7cc1e080970dd *man/SNP.Rd
ac2af4a0eb0d4b825413a5f5bfcc3f4d *man/ab.Rd
03720548d2c36d2095ec94a154f29c3f *man/aldh2.Rd
45c2396890978948f70f349f5da06739 *man/apoeapoc.Rd
c6be7958a2d298344c6c3ac2f1e34d47 *man/asplot.Rd
251f2296eaf332ce8bd40cd21aeb4adc *man/b2r.Rd
978e4573d77186f76fe1c1bb89a53098 *man/bt.Rd
c300e8ebfd7c489dd0982c400ddbe252 *man/ccsize.Rd
af12e56cf9966f5227b613edbd2adfa8 *man/cf.Rd
ea78a82ed6e08feb99bb957004ddd212 *man/chow.test.Rd
2e1357ddd3284215b091133f3ca1f2b3 *man/comp.score.Rd
4d02b9d41f2830e5b4583840e80cec41 *man/crohn.Rd
fa0a6ec7466f866984ffd2b8dd78fcef *man/fa.Rd
f215b5404c7aea3bd42b69acc2187394 *man/fbsize.Rd
7df6046e493c6675b2f0bb9dfea89a7d *man/fsnps.Rd
211b8759a2030c01fb5bb2a96b40cfbe *man/gap-internal.Rd
3aec9aa8394e221abedb217933d79831 *man/gap-package.Rd
895a8e647c9f3a07ba58eb932bea6bb6 *man/gc.em.Rd
770cb18876c3a7f373b00b13100cda43 *man/gcontrol.Rd
3a7917bfb1362fb9b97a0a79ed6aa885 *man/gcontrol2.Rd
50236d958320e9fe30e650ed28c62e7f *man/gcp.Rd
03906b655ea983204ccfb2d9d446b3f3 *man/genecounting.Rd
c8b00ada02c478c0dee6a48d3c06dfed *man/gif.Rd
b9b6c78e91ab3ca7a610b666b8ec18b1 *man/h2.Rd
d9a80f70927b3442f737c260b1c572ee *man/hap.Rd
9d0ed58b191698271b16943bc45f133b *man/hap.em.Rd
5013832716a32b2e137872b59635f07b *man/hap.score.Rd
0607fcc587a46a084b4893bfdd42fb89 *man/hla.Rd
891c5e027a14c90fb3d13aecdc79f09c *man/hr1420.Rd
17d66d2df9987bd81b69d15a23c65e0d *man/htr.Rd
55f69c28af85267e1b56319dedb35c2a *man/hwe.Rd
130a3ac9ce464e5953548fb003315414 *man/hwe.cc.Rd
fb9793148e21875d7e794afb34782d04 *man/hwe.hardy.Rd
7185557fe2cbb493f8c0f7d7eec38d1a *man/kin.morgan.Rd
d9776e99221ce0af9e45e0661b3a9342 *man/klem.Rd
dbc7151e434555371b68b10dabb90968 *man/l51.Rd
023ff843b919e7034ed5ed4b343ec738 *man/lukas.Rd
73d81f5c032f6c560ff2dbd3d573aacf *man/makeped.Rd
98331005b714b77aadb6f3206c83c905 *man/mao.Rd
3eb68e5bfc62fe1cc05c7c3df424e464 *man/masize.Rd
a526afb58f7d6bf77a9015f99ba5395d *man/metap.Rd
9131b90ae8b7b9f5d8ceb495dfc58fc1 *man/metareg.Rd
8ad061108e6d86244201f16440c54200 *man/meyer.Rd
b1340a6d90a7b364650d38f7f701cb52 *man/mfblong.Rd
726695a059ec76fd97e2d134c562931c *man/mhtdata.Rd
c4c7797c9d030e16417c2939b3c59627 *man/mhtplot.Rd
d1e05234b6ef240641b0a6beb0a70b3b *man/mhtplot2.Rd
2c2728ceeca87564731e8826e1084e26 *man/mia.Rd
17c4e5d7b40c84935a91350cbbadbd80 *man/mtdt.Rd
c185e250df9fe1883f5753c3f9026c44 *man/mtdt2.Rd
fdcf3e36c3944514bdb4c0ad3cb219e1 *man/muvar.Rd
ca2e4d579cabcabeb484cd3f60bde48d *man/mvmeta.Rd
72802dddb4c17e9d8f3f9a3055b3286f *man/nep499.Rd
dcd5992c43a3b90bab848e0f11a37b0b *man/pbsize.Rd
eeb76a78bf79101a08246d21aba25963 *man/pbsize2.Rd
2338325bfc84979ffe1861f373620767 *man/pedtodot.Rd
1e660d6ad4e49dcd549011bea8609088 *man/pfc.Rd
863d9b656fbce31c15c4d323dab435db *man/pfc.sim.Rd
f34b3b3a310080d38b4b3d6f9b8bf000 *man/pgc.Rd
f2fe95f66c1a933b9982ef02a3bf62f5 *man/plot.hap.score.Rd
ac89bc7594b7da2d64998107199f1f5e *man/print.hap.score.Rd
3a72933f24bbbfd089a29f23fee8486f *man/qqfun.Rd
4721ba5195ab5e63ba577a122fba6a84 *man/qqunif.Rd
3395fc45edcd706e1fbf6bbc1c1306ad *man/read.ms.output.Rd
389cd147a4d7abb9329686022bd2e5d5 *man/s2k.Rd
bffaef64a7611e909856be585fa2057c *man/tscc.Rd
a50c361ed370de5354ca759a9fb65b66 *man/whscore.Rd
63216bf93491afea7a8a5c000e02c99b *src/2k.c
a5246f017cadd9028233dca1c1226a22 *src/2ld.c
05937c1a3c35fb75d582fd6cd4178c39 *src/cline.c
dd47033074934e7488c53a721e9a3e9d *src/cline.h
e3b943ed18f2aa9172547a363121fde6 *src/gcontrol_c.c
e9e68460f1db1639e1863c9e726b858a *src/gcx.c
0d6f3aeb89408b28ee946340f9bd6eda *src/gdef.h
211c7fa1e8d4edca81395b5bdfba172b *src/gif_c.c
b37f206aebe648576f6ca848d05be62a *src/hap.h
725d2892f40e946c5577e4f283d4533d *src/hap_c.c
ff600070cd93e88d7f4993078d5b706d *src/hwe.hardy.c
f584cc599b685b497647f80fedcf84c3 *src/kin.morgan.c
7c05c0a18a4291f7e25d7f6d9534a2b6 *src/makeped_c.c
d55800110670028db223b76f36b32080 *src/mia.c
d32e2355aaf021e39740ba64c2e7aef3 *src/muvar.c
0468ab43be97acd7224eb2f62860e04b *src/nghds.h
41657d605756ac909788fa4b25a28e1e *src/package_native_routine_registration_skeleton.c
5bf4b6cd0593635d9747f884807f6e74 *src/pfc.f
afbefccc67ddc11cd83adfe49844bad9 *src/pfc.sim.f
d76d059a0109d78bb95b83edab6da626 *src/pgc.h
5440cadd48546f1ba3ee83e31d4f6cb0 *src/pgc_c.c
d56a95e439a688ddfc520deeeb12ed6a *src/whscore.c
ed2db81e102e367aafaf67e2e694b5b4 *vignettes/1-1-13.pdf
160a071562bfc594cacef77e30e23d14 *vignettes/4w.rda
9117a9e5a9d3b683662573dc66c663d2 *vignettes/figures/4w.pdf
84351a5f86452240ea4a049e438c707b *vignettes/figures/ESplot.pdf
1131d7a643e35fef547cd91e1abf7abe *vignettes/figures/asplot.pdf
bab992b6144dd2cf434ae99c5c5851c7 *vignettes/figures/figure1.jpg
49aa38dbc063c592a1d30ae4445f220c *vignettes/figures/lukas.pdf
a3af3a1c6dd3fae251fe23bfa58863d0 *vignettes/figures/mhtplot.png
5143b4ca13bb5b57897e02426054efdc *vignettes/figures/qqunif.pdf
11d4660e47b2ffb75571d8232aab20d7 *vignettes/gap.Rnw
8e2d01dd37e9c43e4cfb59a332ca78f2 *vignettes/gap.bib
0b09c8c3f650854f6b22b9c6ae3d63c2 *vignettes/gap.enl
c5df70ec5669dc0a3118e48db1a4ce10 *vignettes/h2.Rnw
dbe7d671a4382c1d5ee2b9aaaa1f8247 *vignettes/jss.Rnw
08a9bf1af9a46c62b202fc539848b1fb *vignettes/jss.bib
b9564ddd59a06782310989e8f33db55e *vignettes/jsslogo.jpg
6119417bf33f46b5ba1c6464dd3071f1 *vignettes/peddraw.pdf
f63e9f9742a98202881cae673ada7f0f *vignettes/pedigrees.rda
72efcb9e640994c8e1e21c31bd242599 *vignettes/pedigrees/dot1.pdf
c14d0295e62d0effa7fd3bd07da3f4a3 *vignettes/pedigrees/dot2.pdf
5f0b4f8bfccf128a81b6eeae1daab49b *vignettes/pedigrees/dot3.pdf
a69db4c6b931b6323bfc2d6e06480257 *vignettes/pedigrees/fdp1.pdf
fe5e56461fef36d52335fef28617e586 *vignettes/pedigrees/fdp2.pdf
e22ca033c406d52dd2ab40eb48554b2c *vignettes/pedigrees/fdp3.pdf
c9c178e7ebdb5a9074bf2e4eb5343ace *vignettes/pedtodot.Rnw
f05ecc0e02f3b3edebd434234172f90a *vignettes/results/gap_1.txt
ead0a11b873657d40db849e400884074 *vignettes/results/gap_2.txt
a648b1b8db9a19707ffc40e3a70c19f9 *vignettes/results/kinship_1.txt
ead0a11b873657d40db849e400884074 *vignettes/results/kinship_2.txt
77b73fe65f5571def39a5e48a585023f *vignettes/rnews.Rnw
back to top