https://github.com/cran/gap
Tip revision: d19cac44fcfb152fd7b91a234873ba64c706a5c6 authored by Jing Hua Zhao on 19 April 2017, 10:10:23 UTC
version 1.1-17
version 1.1-17
Tip revision: d19cac4
NAMESPACE
useDynLib(gap, .registration = TRUE)
export(AE3, ab, allele.recode, a2g, asplot,
BFDP, bt, b2r,
Cox.est, Cox.T, ccsize, chow.test, comp.score, cov.invlogit,
DevH0dominant,
DevH0dominant.est,
DevH0recessive,
DevH0recessive.est,
DevHaGdominant,
DevHaGdominant.est,
DevHaGrecessive,
DevHaGrecessive.est,
ESplot,
fbsize, FPRP,
g2a, g2a.c, gc.control, gc.em, gcode, gcontrol, gcontrol2, gcp, genecounting, geno.recode,
getPTE, getb1star, gif, grec2g, MCMCgrm,
h2, h2G, h2GE, h2l, hap, hap.control, hap.em, hap.score, hmht.control, htr,
hwe, hwe.cc, hwe.hardy, HapDesign, HapFreqSE,
invlogit,
KCC, k, klem, kin.morgan,
LD22, LDkl, logit,
m2plem, makeped, masize, metap, metareg, mhtplot, mhtplot2, mht.control, mia, micombine,
mtdt, mtdt2, muvar, mvmeta,
PARn, pbsize, pbsize2, pedtodot, pfc, pfc.sim, pgc, plem2m, plot.hap.score, print.hap.score,
qqfun, qqunif,
read.ms.output, revhap, revhap.i, ReadGRM, ReadGRMBin, ReadGRMPLINK, ReadGRMPCA,
s2k, se.exp, se.invlogit, snp.ES, snp.HWE, snp.PAR, solve_skol,
toETDT, tscc,
ungcode,
VR,
whscore, WriteGRM, WriteGRMBin, WriteGRMSAS,
x2,
z)
S3method(plot, hap.score)
S3method(print, hap.score)
import(utils)
importFrom("graphics", "abline", "arrows", "axis", "box", "identify",
"legend", "lines", "mtext", "par", "plot", "points",
"segments", "text")
importFrom("grDevices", "palette", "xy.coords")
importFrom("stats", "as.formula", "coefficients", "cor", "dnorm",
"glm", "integrate", "median", "nlm", "pchisq", "pf",
"pnorm", "ppoints", "pt", "qchisq", "qnorm", "qqplot", "qt",
"quantile", "rbinom", "rexp", "rnorm", "runif", "var")