https://github.com/cran/sn
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Tip revision: e374248a63a887bcf576d75453fce3ce86d80eab authored by Adelchi Azzalini on 14 July 2015, 00:00:00 UTC
version 1.2-3
Tip revision: e374248
sn-st.info.Rd
%  file sn/man/sn-st.info.Rd  
%  This file is a component of the package 'sn' for R
%  copyright (C) 2013 Adelchi Azzalini
%---------------------
\name{sn-st.info}
\alias{sn.infoUv}
\alias{sn.infoMv}
\alias{st.infoUv}
\alias{st.infoMv}
\title{Expected and observed Fisher information for \acronym{SN} 
  and \acronym{ST} distributions}

\description{
  Computes Fisher information for parameters of simple sample having
  skew-normal (\acronym{SN}) or skew-\eqn{t} (\acronym{ST}) distribution or
  for a regression model with errors term having such distributions, in the
  \acronym{DP} and \acronym{CP} parametrizations.
}

\usage{
sn.infoUv(dp=NULL, cp=NULL, x=NULL, y, w, penalty=NULL,  norm2.tol=1e-06) 
    
sn.infoMv(dp, x=NULL, y, w, penalty=NULL, norm2.tol=1e-06)

st.infoUv(dp = NULL, cp = NULL, x = NULL, y, w, fixed.nu = NULL, 
    symmetr = FALSE, penalty = NULL, norm2.tol = 1e-06) 

st.infoMv(dp, x = NULL, y, w, fixed.nu = NULL, symmetr = FALSE, 
    penalty = NULL, norm2.tol = 1e-06) 
}

\arguments{

 \item{dp, cp}{direct or centred parameters, respectively; one of the two
  vectors must be supplied, but not both. For the univariate \acronym{SN}
  distribution, \code{sn.infoUv} is to be used, and these arguments are
  vectors. In the multivariate case, \code{sn.infoMv} is to be used and these
  arguments are lists. See \code{\link{dp2cp}} for their description.}

 \item{x}{an optional matrix which represents the design matrix of a 
  regression model}

 \item{y}{a numeric vector (for \code{sn.infoUv} and \code{st.infoUv})
   or a matrix (for \code{sn.infoMv} and \code{st.infoMv}) representing the
   response.  In the \acronym{SN} case ( \code{sn.infoUv} and
   \code{sn.infoMv}), \code{y} can be missing, and in this case the expected
   information matrix is computed; otherwise the observed information is
   computed. In the \acronym{ST} case (\code{st.infoUv} and \code{st.infoMv}),
   \code{y} is a required argument, since only the observed information matrix
   for \acronym{ST} distributions is implemented. See \sQuote{Details} for
   additional information.}

 \item{w}{an optional vector of weights; if missing, a vector of 1's is
  generated.}

\item{fixed.nu}{an optional numeric value which declared a fixed value of the
   degrees of freedom, \code{nu}. If not \code{NULL}, the information matrix
   has a dimension reduced by 1.}
   
\item{symmetr}{a logical flag which indicates whether a symmetry condition of 
   the distribution is being imposed; default is \code{symmetr=FALSE}.}   

\item{penalty}{a optional character string with the name of the penalty function 
   used in the call to \code{\link{selm}}; see this function for its description;}

\item{norm2.tol}{for the observed information case, the Mahalanobis squared
   distance of the score 0 is evaluated; if it exceeds \code{norm2.tol}, a
   warning message is issued, since the \sQuote{information matrix} so
   evaluated may be not positive-definite.  See \sQuote{Details} for
   additional information. }
}

\value{
a list containing the following components:
\item{dp, cp}{one of the two arguments is the one supplied on input; 
the other one matches the previous one in the alternative parametrization.}

\item{type}{the type of information matrix: "observed" or "expected".}

\item{info.dp, info.cp}{matrices of Fisher (observed or expected) 
information in the two parametrizations.}
 
\item{asyvar.dp, asyvar.cp}{inverse matrices of Fisher information in the two
parametrizations, when available; See \sQuote{Details} for additional
information. }
 
\item{aux}{a list containing auxiliary elements, depending of the selected 
function and the type of computation.}
}

\section{Details}{

In the univariate \acronym{SN} case, when \code{x} is not set, then a simple
random sample is assumed and a matrix \code{x} with a single column of all 
1's is constructed; in this case, the supplied vector \code{dp} or \code{cp}
must have length 3.  If \code{x} is set, then the supplied vector of parameters,
\code{dp} or \code{cp}, must have length \code{ncol(x)+2}.
In the multivariate case, a direct extension of this scheme applies.

If the observed information matrix is required, \code{dp} or \code{dp} should
represent the maximum likelihood estimates (MLE) for the given \code{y},
otherwise the information matrix may fail to be positive-definite. Therefore,
the squared Mahalobis norm of the score vector is evaluated and compared with
\code{norm2.tol}. If it exceeds this threshold, it is taken as an indication
that the parameter is not at the \acronym{MLE} and a warning message is issued.
The returned list still includes \code{info.dp} and \code{info.cp}, but in 
this case these represent merely the matrices of second derivatives;
\code{asyvar.dp} and \code{asyvar.cp} are set to \code{NULL}.

}

\section{Background}{
  The information matrix for the the univariate \acronym{SN} distribution in
  the two stated parameterizations in discussed in Sections 3.1.3--4 of 
  Azzalini and Capitanio (2014). For the multivariate distribution,   
  Section 5.2.2 of this monograph summarizes briefly the findings of 
  Arellano-Valle and Azzalini (2008).
 
  For \acronym{ST} distributions, only the observed information matrix is 
  provided currently. Computation for the univariate case is based on 
  DiCiccio and Monti (2011). For the multivariate case, the score function is
  computed using expression of Arellano-Valle (2010) followed by numerical
  differentiation.
}

\references{
  Arellano-Valle, R. B. (2010).
  The information matrix of the multivariate skew-$t$ distribution.
  \emph{Metron}, \bold{LXVIII}, 371--386.

  Arellano-Valle, R. B., and Azzalini, A. (2008).
  The centred parametrization for the multivariate skew-normal distribution.
  \emph{J. Multiv. Anal.} \bold{99}, 1362--1382.
  Corrigendum: vol.\,100 (2009), p.\,816.

  Azzalini, A. with the collaboration of Capitanio, A. (2014). 
  \emph{The Skew-Normal and Related Families}. 
  Cambridge University Press, IMS Monographs series.
  
  DiCiccio,  T. J. and Monti, A. C. (2011).  
  Inferential aspects of the skew \eqn{t}-distribution.
  \emph{Quaderni di Statistica} \bold{13}, 1--21.
}

\seealso{\code{\link{dsn}}, \code{\link{dmsn}}, \code{\link{dp2cp}}}

\examples{
infoE <- sn.infoUv(dp=c(0,1,5))
infoO <- sn.infoUv(cp=c(0,1,0.8), y=rsn(50, dp=c(0,1,5)))
#
data(wines)
X <- model.matrix(~ pH + wine, data=wines)
fit <- sn.mple(x=X, y=wines$alcohol)
infoE <- sn.infoUv(cp=fit$cp, x=X)
infoO <- sn.infoUv(cp=fit$cp, x=X, y=wines$alcohol)
}
\keyword{distribution}
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