.. :changelog:

History
-------

.. to_doc

---------------------
17.5.8 (2017-04-23)
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* Fix mulled image cleanup. #55.

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17.5.7 (2017-03-15)
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* Updates to CWL library functionality for several months worth of CWL tool updates.
* Allow finding tools by a URI-like strings (e.g. ``file://``, ``http://``, ``dockstore://``).
* Bring in latest Galaxy updates.

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17.5.6 (2017-03-01)
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* Expanded options for mulled CLI tools and library functionality.
  Fixes #49.

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17.5.5 (2017-02-26)
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* Fix bug in 17.5.4 where under certain conditions conda-build would attempt to be setup
  with the conda --use-local flag - which is not allowed.

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17.5.4 (2017-02-26)
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* Fix local builds Conda support to reflect conda-build is required.
* Fix default target path for miniconda installs.

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17.5.3 (2017-02-24)
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* Update against the latest Galaxy dev branch changes.
* Update Conda utilities to allow using locally built packages.

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17.5.2 (2017-02-21)
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* Conda utility enhancements to fix a Planemo bug.

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17.5.1 (2017-02-21)
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* Various improvements to Galaxy tool linting.

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17.5.0 (2017-02-16)
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* Bring in the last of the Galaxy dev changes.
* Allow Conda installs to target global Conda config (for Planemo)

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17.1.2 (2017-01-23)
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* Bring in the last of the Galaxy dev changes before branch of release_17.01.
* Improvements to mulled testing thanks to @mvdbeek.

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17.1.1 (2016-12-14)
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* Revert changes to shell command execution in Galaxy that had unintended consequences for Planemo.    

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17.1.0 (2016-12-12)
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* Improved mulled logging thanks to @bgruening.
* Bring in the latest Galaxy dev changes.

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16.10.10 (2016-10-24)
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* Fix mulled package data fetching for Mac OS X (thanks to @dannon).

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16.10.9 (2016-10-21)
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* Small fixes including to reflect mulled name on quay.io changed to biocontainers.

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16.10.8 (2016-10-10)
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* More mulled enhancements and bug fixes thanks to @bgruening and @daler.

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16.10.7 (2016-10-08)
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* More mulled enhancements and bug fixes thanks to @bgruening.
* Fix bioconda support by adding conda-forge to list of default channels.

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16.10.6 (2016-10-07)
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* More mulled enhancements thanks to @bgruening.

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16.10.5 (2016-10-04)
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* Some docstring cleanup and minor tweaks to Conda support for downstream planemo mulled work.

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16.10.4 (2016-10-03)
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* More mulled fixes and enhancements.

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16.10.3 (2016-10-02)
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* Small mulled and Conda related fix and enhancements.

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16.10.2 (2016-09-30)
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* Fix setup.py for features in 16.10.1.

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16.10.1 (2016-09-29)
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* Updates for recents changes to Galaxy and initial mulled scripts and container resolver.

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16.10.0 (2016-08-31)
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* Updates for recent changes to Galaxy.

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16.7.10 (2016-08-04)
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* Updates for recent change to Galaxy.    

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16.7.9 (2016-06-13)
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* Updates for recent changes to Galaxy and cwltool.

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16.7.8 (2016-06-05)
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* Updates to include Galaxy library for verifying test outputs
  and the latest dev changes to Galaxy.

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16.7.7 (2016-05-23)
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* Fixes to CWL and Docker libraries for Planemo.

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16.7.6 (2016-05-11)
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* Fixes to cwl processing for Planemo.
    
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16.7.5 (2016-05-11)
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* Updates to cwl processing for Planemo.

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16.7.4 (2016-05-10)
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* Updates to cwl processing for Planemo.

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16.7.3 (2016-05-07)
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* Updates to cwltool_deps for Planemo.

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16.7.2 (2016-05-06)
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* Updates to tool parsing and linting for Planemo.

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16.7.1 (2016-05-02)
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* Update against the latest development branch of Galaxy.

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16.7.0 (2016-04-21)
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* Update against the latest development branch of Galaxy.

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16.4.1 (2016-04-08)
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* Update against the latest development branch of Galaxy.

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16.4.0 (2016-02-15)
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* Update against the latest development branch of Galaxy.

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16.1.9 (2016-01-14)
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* Fix a bug in the source distribution of galaxy-lib.

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16.1.8 (2016-01-12)
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* Update against Galaxy's release_16.01 branch.

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16.1.7 (2016-01-03)
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* Update against Galaxy's dev branch - including conda updates,
  dependency resolution changes, and toolbox updates.

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16.1.6 (2015-12-28)
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* Additional fixes to setup.py and updates for recent changes to
  Galaxy's dev branch.

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16.1.5 (2015-12-22)
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* Fix another bug that was preventing dependency resolution from
  working in Pulsar.

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16.1.4 (2015-12-22)
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* Another setup.py fix for job metrics module.

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16.1.3 (2015-12-22)
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* Python 3 fixes and updates for recent Galaxy dev commits.

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16.1.2 (2015-12-21)
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* Fix for missing galaxy.tools.parser package in setup.py.
* Fix LICENSE in repository.

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16.1.1 (2015-12-20)
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* Fix small issues with dependencies, naming, and versioning with first release.

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16.1.0 (2015-12-20)
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* Setup project.

.. _bioblend: https://github.com/galaxyproject/bioblend/
.. _XSD: http://www.w3schools.com/schema/
.. _lxml: http://lxml.de/
.. _xmllint: http://xmlsoft.org/xmllint.html
.. _nose: https://nose.readthedocs.org/en/latest/