https://github.com/cran/BDgraph
Tip revision: f6fcec4d56cc7d33b2572bc4387f66768f53fd4e authored by Abdolreza Mohammadi on 29 May 2014, 15:11:38 UTC
version 2.8
version 2.8
Tip revision: f6fcec4
summary.bdgraph.Rd
\name{summary.bdgraph}
\alias{summary.bdgraph}
\title{Summary function for "bdgraph" output}
\description{
This function gives us a summary of the result from BD-MCMC algorithm according to output from "bdgraph" function.
}
\usage{
\method{summary}{bdgraph}( object, vis = TRUE, layout = layout.circle, ... )
}
\arguments{
\item{object}{ An object with S3 class "bdgraph". }
\item{vis}{Logical: if TRUE (default) you will see the plot result.}
\item{layout}{ The vertex placement algorithm which is according to igraph package. The default is "layout.circle". }
\item{\dots}{ System reserved (no specific usage).}
}
\references{
Mohammadi, A. and E. C. Wit (2013). Bayesian structure learning in sparse Gaussian
graphical models, arXiv:1210.5371v6. \url{http://arxiv.org/abs/1210.5371v6}
}
\author{Abdolreza Mohammadi and Ernst Wit}
\seealso{\code{\link{bdgraph}}}
\examples{
\dontrun{
# generating synthetic multivariate normal data from a 'random' graph
data.sim <- bdgraph.sim( n = 50, p = 6, vis = TRUE )
output <- bdgraph( data = data.sim, iter = 2000 )
summary(output)
summary( output, vis = FALSE )
}
}