https://github.com/cran/bbmle
Tip revision: 496d5e50e8ee11dd27cb1c79acdaa794c210c89d authored by Ben Bolker on 26 August 2008, 00:00:00 UTC
version 0.9.0
version 0.9.0
Tip revision: 496d5e5
TODO
BUGS/ISSUES:
issues when hitting new minimum in confint rather than
profile; should return unevaluated call too in this case
use numDeriv library hessian() function instead of nlme::fdHess?
(use nlme::fdHess to avoid loading whole package?)
turn off Hessian calculation for profile fits??
should print warning immediately if convergence fails
some weird stuff with returned fit from found-better-fit profile --
treating profiled value as fixed ...
BUG: order of parameters matters for L-BFGS-B
(fixed)
adjusting parameter vectors for lower, upper, parscale, ...
when some params are fixed ...
sort out names BS -- when can we safely remove names?
TO DO:
model-averaging?
more documentation -- especially S4 methods!
especially:
profile
plot profile
confint
catch/interpret more error messages?
(try to filter last.warning?)
add DIC to IC tabs?
lmer?
WISHLIST:
start as FUNCTION (i.e., self-start)
analytic derivatives
relist
subset
predict (feasible for formula arguments
if we know the MEAN of the relevant distribution?)
plot.predict
drop1, add1, etc.
link functions ("identity","log", "logit", etc.)
clean up/argue about data handling: closures etc. etc. etc...
document argument handling:
start must be a named vector or a named list
[OR?? inherit from parnames(minuslogl)?]
if start is not a list (i.e. a numeric vector)
set vecpar TRUE
convert start to a list
if missing and default.start is TRUE use formals(minuslogl)