https://github.com/galaxyproject/galaxy
Tip revision: aa6028421bfb310133eae6c118dc8d4822a42560 authored by John Chilton on 15 October 2020, 16:08:30 UTC
Version 20.9.0 of data (tag galaxy-data-20.9.0).
Version 20.9.0 of data (tag galaxy-data-20.9.0).
Tip revision: aa60284
show_params.mako
<%inherit file="/base.mako"/>
<%namespace file="/message.mako" import="render_msg" />
<% from galaxy.util import nice_size, unicodify %>
<style>
.inherit {
border: 1px solid #bbb;
padding: 15px;
text-align: center;
background-color: #eee;
}
</style>
<h2>
% if tool:
${tool.name | h}
% else:
Unknown Tool
% endif
</h2>
<h3>Dataset Information</h3>
<table class="tabletip" id="dataset-details">
<tbody>
<%
encoded_hda_id = trans.security.encode_id( hda.id )
encoded_history_id = trans.security.encode_id( hda.history_id )
%>
<tr><td>Number:</td><td>${hda.hid | h}</td></tr>
<tr><td>Name:</td><td>${hda.name | h}</td></tr>
<tr><td>Created:</td><td>${unicodify(hda.create_time.strftime(trans.app.config.pretty_datetime_format))}</td></tr>
## <tr><td>Copied from another history?</td><td>${hda.source_library_dataset}</td></tr>
<tr><td>Filesize:</td><td>${nice_size(hda.dataset.file_size)}</td></tr>
<tr><td>Dbkey:</td><td>${hda.dbkey | h}</td></tr>
<tr><td>Format:</td><td>${hda.ext | h}</td></tr>
</tbody>
</table>
<h3>Job Information</h3>
<table class="tabletip">
<tbody>
%if job:
<tr><td>Galaxy Tool ID:</td><td>${ job.tool_id | h }</td></tr>
<tr><td>Galaxy Tool Version:</td><td>${ job.tool_version | h }</td></tr>
%endif
<tr><td>Tool Version:</td><td>${hda.tool_version | h}</td></tr>
<tr><td>Tool Standard Output:</td><td><a href="${h.url_for( controller='dataset', action='stdout', dataset_id=encoded_hda_id )}">stdout</a></td></tr>
<tr><td>Tool Standard Error:</td><td><a href="${h.url_for( controller='dataset', action='stderr', dataset_id=encoded_hda_id )}">stderr</a></td></tr>
%if job:
<tr><td>Tool Exit Code:</td><td>${ job.exit_code | h }</td></tr>
%if job.job_messages:
<tr><td>Job Messages</td><td><ul style="padding-left: 15px; margin-bottom: 0px">
%for job_message in job.job_messages:
<li>${ job_message['desc'] |h }</li>
%endfor
<ul></td></tr>
%endif
%endif
<tr><td>History Content API ID:</td>
<td>${encoded_hda_id}
%if trans.user_is_admin:
(${hda.id})
%endif
</td></tr>
%if job:
<tr><td>Job API ID:</td>
<td>${trans.security.encode_id( job.id )}
%if trans.user_is_admin:
(${job.id})
%endif
</td></tr>
%if job.copied_from_job_id:
<tr><td>Copied from Job API ID:</td>
<td>${trans.security.encode_id( job.copied_from_job_id )}
%if trans.user_is_admin:
(${job.copied_from_job_id})
%endif
</td></tr>
%endif
%endif
<tr><td>History API ID:</td>
<td>${encoded_history_id}
%if trans.user_is_admin:
(${hda.history_id})
%endif
</td></tr>
%if hda.dataset.uuid:
<tr><td>UUID:</td><td>${hda.dataset.uuid}</td></tr>
%endif
%if trans.user_is_admin or trans.app.config.expose_dataset_path:
%if not hda.purged:
<tr><td>Full Path:</td><td>${hda.file_name | h}</td></tr>
%endif
%endif
</tbody>
</table>
%if job:
<div class="job-parameters" dataset_id="${encoded_hda_id}" dataset_type="hda">
</div>
%endif
<h3>Inheritance Chain</h3>
<div class="inherit" style="background-color: #fff; font-weight:bold;">${hda.name | h}</div>
% for dep in inherit_chain:
<div style="font-size: 36px; text-align: center; position: relative; top: 3px">↑</div>
<div class="inherit">
'${dep[0].name | h}' in ${dep[1]}<br/>
</div>
% endfor
%if job and job.command_line and (trans.user_is_admin or trans.app.config.expose_dataset_path):
<h3>Command Line</h3>
<pre class="code">
${ job.command_line | h }</pre>
%endif
%if job and (trans.user_is_admin or trans.app.config.expose_potentially_sensitive_job_metrics):
<div class="job-metrics" dataset_id="${encoded_hda_id}" aws_estimate="${trans.app.config.aws_estimate}" dataset_type="hda">
</div>
%endif
%if trans.user_is_admin:
<h3>Destination Parameters</h3>
<div class="job-destination-parameters" job_id="${trans.security.encode_id(job.id)}">
</div>
%endif
%if job and job.dependencies:
<h3>Job Dependencies</h3>
<table class="tabletip">
<thead>
<tr>
<th>Dependency</th>
<th>Dependency Type</th>
<th>Version</th>
%if trans.user_is_admin:
<th>Path</th>
%endif
</tr>
</thead>
<tbody>
%for dependency in job.dependencies:
<tr><td>${ dependency['name'] | h }</td>
<td>${ dependency['dependency_type'] | h }</td>
<td>${ dependency['version'] | h }</td>
%if trans.user_is_admin:
%if 'environment_path' in dependency:
<td>${ dependency['environment_path'] | h }</td>
%elif 'path' in dependency:
<td>${ dependency['path'] | h }</td>
%else:
<td></td>
%endif
%endif
</tr>
%endfor
</tbody>
</table>
%endif
%if hda.peek:
<h3>Dataset peek</h3>
<pre class="dataset-peek">${hda.peek}
</pre>
%endif
<script type="text/javascript">
$(function(){
$( '.input-dataset-show-params' ).on( 'click', function( ev ){
## some acrobatics to get the Galaxy object that has a history from the contained frame
if( window.parent.Galaxy && window.parent.Galaxy.currHistoryPanel ){
window.parent.Galaxy.currHistoryPanel.scrollToId( 'dataset-' + $( this ).data( 'hda-id' ) );
}
})
window.bundleEntries.mountJobMetrics();
window.bundleEntries.mountJobParameters();
window.bundleEntries.mountDestinationParams();
});
</script>