#!/usr/bin/env genome-perl5.12

use strict;
use warnings;

BEGIN {
    # This allows the genome command to self-serve as a tab completer for the bash shell.
    # When "genome" is run by bash as a tab completer, the code below will service the
    # tab-completion request and then exit before doing any real work.
    # The code is in an eval to prevent problems on systems which do no have Getopt::Complete 
    # installed.  The code is in a BEGIN block to ensure it still runs before anything else.
    if ($ENV{COMP_CWORD}) {
        eval "use Getopt::Complete::Cache class => 'Genome::Command', above => 1;";
        exit if ($@);
    }
    if ($ENV{COMP_LINE}) {
        #for transitioning from older version of completion
        #just return no result
        exit;
    }
};

# do a smart "use lib" for developers
# this only has an effect when your pwd is under Genome/
use above "Genome";

# wrap the base command smartly for the shell
use Genome::Command;
Genome::Command->execute_with_shell_params_and_exit();

=pod

=head1 NAME

genome SUBCOMMAND ...

=head1 SYNOPSIS

genome (list all available commands)

genome project              ...
genome taxon                ...
genome population-group     ...
genome individual           ...
genome sample               ...
genome instrument-data      ...
genome processing-profile   ...
genome model                ...
genome tools                ...
genome disk                 ...

=head1 DESCRIPTION

This is the top-level tool for working with the genome modeling system and tools.

Just run it with no parameters to get a list of available commands.

Every command and sub-command supports the --help option.

=head1 OPTIONS

These depend on the specific sub-command.

=head1 DEVELOPER NOTE

Running this WITHIN a source tree under the Genome namespace will automatically "use lib" your tree.

=head1 BUGS

Report bugs to software at genome.wustl.edu

=head1 AUTHOR

Eddie Belter

=cut