https://github.com/sanger-pathogens/gubbins
Tip revision: 5f07d92fc3fa661e41c664cb824bc4dff8449852 authored by andrewjpage on 20 January 2015, 09:10:33 UTC
Merge pull request #125 from andrewjpage/remove_internal_nodes_from_final_tree
Merge pull request #125 from andrewjpage/remove_internal_nodes_from_final_tree
Tip revision: 5f07d92
one_recombination.expected.stats
Sample name Num SNPs in recombinations Num of SNPs outside recombinations Total SNPs Bases in Recombinations Estimated Num SNPs if there were no recombinations Num Recombination Blocks r/m b/m Genome Length
sequence_1 0 0 0 0 0 0 0.000000 0.000000 135
sequence_2 103 8 111 104 41 1 12.875000 0.125000 129
sequence_3 0 0 0 0 0 0 0.000000 0.000000 129
sequence_4 0 0 0 0 0 0 0.000000 0.000000 129
sequence_5 0 0 0 0 0 0 0.000000 0.000000 129
sequence_6 0 0 0 0 0 0 0.000000 0.000000 127
sequence_7 0 0 0 0 0 0 0.000000 0.000000 127
sequence_8 0 0 0 0 0 0 0.000000 0.000000 127
sequence_9 0 0 0 0 0 0 0.000000 0.000000 127
sequence_10 0 0 0 0 0 0 0.000000 0.000000 135
N3 0 0 0 0 0 0 0.000000 0.000000 135
N6 0 0 0 0 0 0 0.000000 0.000000 131
N5 0 0 0 0 0 0 0.000000 0.000000 133
N4 0 0 0 0 0 0 0.000000 0.000000 135
N2 0 0 0 0 0 0 0.000000 0.000000 135
N8 0 0 0 0 0 0 0.000000 0.000000 127
N7 0 0 0 0 0 0 0.000000 0.000000 127
N1 0 0 0 0 0 0 0.000000 0.000000 135
