https://github.com/GPflow/GPflow
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Tip revision: d3ff145077c60bd6b08c5fdbe7b613825a237d8c authored by Jesper Nielsen on 26 May 2022, 16:17:32 UTC
Add small utility for reshaping / transposing.
Tip revision: d3ff145
README.md
# GPflow documentation

## Read documentation online

The documentation is stored in a special branch
[`gp-pages`](https://github.com/GPflow/GPflow/tree/gh-pages) and served by
[GitHub Pages](https://pages.github.com/).

We serve a version of documentation for the most recent `develop` branch and for all releases since
`2.4.0`. You can find them online here:

* Redirect to most recent release: https://gpflow.github.io/GPflow/
* `develop`: https://gpflow.github.io/GPflow/develop

Normally our CircleCI build is responsible for building our documentation whenever there is a merge
to `develop` or `master`. See the
[configuration](https://github.com/GPflow/GPflow/blob/develop/.circleci/config.yml) for details.


## Compile documentation locally

To compile the GPflow documentation locally:

1. Change to the GPflow source directory.

2. Install dev dependencies
   ```bash
   make dev-install
   ```

   If pandoc does not install via pip, or step 4 does not work, go to pandoc.org/installing.html (the PyPI package depends on the external system-wide installation of pandoc executables)

3. Generate auto-generated files
   ```bash
   doc_build_dir="/tmp/gpflow_docs"
   python doc/build_docs.py develop ${doc_build_dir}
   ```

4. Check documentation locally by opening (in a browser) `${doc_build_dir}/develop/index.html`.

## Sharding

The `build_docs.py` script supports building notebooks in parallel on different machines. Example:

```bash
rm -rf /tmp/gpflow_build_docs
mkdir /tmp/gpflow_build_docs

# These three commands can be run in parallel, on different machines:
python doc/build_docs.py --shard 0/3
python doc/build_docs.py --shard 1/3
python doc/build_docs.py --shard 2/3

# The above three lines will have written their results to /tmp/gpflow_build_docs. If run on
# different machines you'll have to copy over, and merge those directories before this line:
python doc/build_docs.py --shard collect develop ${build_dir}/out
```


## Run notebooks locally

The notebooks underneath `source/notebooks` rely on [jupytext](https://github.com/mwouts/jupytext).
Make sure to [install the `jupytext` package](https://github.com/mwouts/jupytext#install) before
calling `jupyter notebook <notebook_file.pct.py>`
(which will automatically create the paired .ipynb file).
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