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Tip revision: 2841268118712a6b1edbc4d811e25ae0923357e9 authored by Sergio Diaz on 09 September 2019, 13:05:19 UTC
Merge branch 'sergio_pasc/gpflow-2.0/move-tests-methods' of github.com:GPflow/GPflow into sergio_pasc/gpflow-2.0/move-tests-methods
Tip revision: 2841268
test_logdensities.py
# Copyright 2018 the GPflow authors.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

import numpy as np
from numpy.random import randn
import tensorflow as tf
import pytest
import gpflow
from gpflow import logdensities, settings
from scipy.stats import multivariate_normal as mvn
from numpy.testing import assert_allclose


rng = np.random.RandomState(1)


@pytest.mark.parametrize("x", [randn(4, 10), randn(4, 1)])
@pytest.mark.parametrize("mu", [randn(4, 10), randn(4, 1)])
@pytest.mark.parametrize("cov_sqrt", [randn(4, 4), np.eye(4)])
def test_multivariate_normal(x, mu, cov_sqrt):
    cov = np.dot(cov_sqrt, cov_sqrt.T)
    L = np.linalg.cholesky(cov)

    gp_result = logdensities.multivariate_normal(x, mu, L)

    if mu.shape[1] > 1:
        if x.shape[1] > 1:
            sp_result = [mvn.logpdf(x[:, i], mu[:, i], cov) for i in range(mu.shape[1])]
        else:
            sp_result = [mvn.logpdf(x.ravel(), mu[:, i], cov) for i in range(mu.shape[1])]
    else:
        sp_result = mvn.logpdf(x.T, mu.ravel(), cov)
    assert_allclose(gp_result, sp_result)
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