https://github.com/cran/fields
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Tip revision: 6c8b30169bba182a68765ee3cb9b4e2ef7d38332 authored by Doug Nychka on 16 November 2011, 00:00:00 UTC
version 6.6.3
Tip revision: 6c8b301
sreg.test.R
# fields, Tools for spatial data
# Copyright 2004-2011, Institute for Mathematics Applied Geosciences
# University Corporation for Atmospheric Research
# Licensed under the GPL -- www.gpl.org/licenses/gpl.html


# test of sreg and related functions

library( fields)
options(echo=FALSE)
 test.for.zero.flag<- 1

set.seed(123)

# Tps has been tested from scratch using basic linear algebra
# so test sreg against this

x<- rat.diet$t
y<- rat.diet$trt

sreg( x,y, lambda= 10)$fitted.values-> out
Tps( x,y, scale="unscaled", lambda=10*length(y))$fitted.values-> out2

test.for.zero( out, out2, tag="predict at lambda sreg/Tps")


#### GCV test

sreg( x,y, tol=1e-12)-> out
gcv.sreg( out, tol=1e-12)$lambda.est -> look0

test.for.zero( out$lambda.est[1,2], look0[1,2], tol=5e-4)

Tps( x,y)-> out2
gcv.Krig( out2, tol=1e-12)$lambda.est[1,2]-> look2
gcv.sreg( out, tol=1e-12)$lambda.est[1,2] -> look

test.for.zero( look, look2, tol=2.1e-6, tag="GCV sreg/Tps")

#### replications
set.seed( 123)
x<-  rep(rat.diet$t,3)
y<- rep( rat.diet$trt,3) + rnorm(39*3)*5

sreg( x,y)-> out
gcv.sreg( out, tol=1e-12)$lambda.est -> look

Tps( x,y, scale="unscaled")-> out2
gcv.Krig( out2, tol=1e-12)$lambda.est-> look2
look2[,1]<- look2[,1]/length( out$xM)

test.for.zero( look[1:3,3], look2[1:3,3],  
              tag="GCV sreg/Tps reps case",tol=1e-06)

test.for.zero( look[2,3], look2[2,3], tol=1e-6, 
              tag="GCV sreg/Tps reps case")


cat( "All done with sreg tests", fill=TRUE)
options(echo=TRUE)









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