https://github.com/Project-MONAI/MONAI/
Tip revision: 59fb2c3cd15e0c352f06b6b28b4f2377d4478e45 authored by Holger Roth on 15 October 2022, 10:48:04 UTC
MonaiAlgo FedStats (#5240)
MonaiAlgo FedStats (#5240)
Tip revision: 59fb2c3
environment-dev.yml
name: monai
channels:
- pytorch
- defaults
- conda-forge
dependencies:
- numpy>=1.17
- pytorch>=1.6
- coverage>=5.5
- parameterized
- setuptools>=50.3.0,!=60.0.0
- ignite==0.4.8
- gdown>=4.4.0
- scipy
- nibabel
- pillow!=8.3.0 # https://github.com/python-pillow/Pillow/issues/5571
- tensorboard
- scikit-image>=0.14.2
- tqdm>=4.47.0
- python-lmdb
- flake8>=3.8.1
- flake8-bugbear
- flake8-comprehensions
- pylint
- mccabe
- pep8-naming
- pycodestyle
- pyflakes
- isort
- types-pkg_resources
- ninja
- torchvision
- psutil
- Sphinx==3.5.3
- recommonmark==0.6.0
- sphinx-autodoc-typehints==1.11.1
- sphinx_rtd_theme==0.5.2
- pandas
- requests
- einops
- transformers<4.22 # https://github.com/Project-MONAI/MONAI/issues/5157
- mlflow
- tensorboardX
- pyyaml
- fire
- jsonschema
- pynrrd
- pydicom
- h5py
- optuna
- pip
- pip:
# pip for itk as conda-forge version only up to v5.1
- itk>=5.2
# black currently at v19 on conda vs v21 on pip
- black
# conda mypy v. slow
- mypy>=0.790
# OS-specific needs to be done via pip:
# https://github.com/conda/conda/issues/8089
- pytype>=2020.6.1; platform_system != "Windows"
- openslide-python==1.1.2
- cucim>=22.8.1; platform_system == "Linux"
- imagecodecs; platform_system == "Linux"
- tifffile; platform_system == "Linux"
- matplotlib!=3.5.0
- nni