https://github.com/Project-MONAI/MONAI/
Tip revision: 52a7fde440123460f2ce13a515a0f3d023292f95 authored by Wenqi Li on 21 October 2022, 12:15:58 UTC
skip test.pypi.org
skip test.pypi.org
Tip revision: 52a7fde
test_affine.py
# Copyright (c) MONAI Consortium
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
# http://www.apache.org/licenses/LICENSE-2.0
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import unittest
from copy import deepcopy
import numpy as np
import torch
from parameterized import parameterized
from monai.data import MetaTensor, set_track_meta
from monai.transforms import Affine
from tests.utils import TEST_NDARRAYS_ALL, assert_allclose, test_local_inversion
TESTS = []
for p in TEST_NDARRAYS_ALL:
for device in [None, "cpu", "cuda"] if torch.cuda.is_available() else [None, "cpu"]:
TESTS.append(
[
dict(padding_mode="zeros", device=device),
{"img": p(np.arange(9).reshape((1, 3, 3))), "spatial_size": (-1, 0)},
p(np.arange(9).reshape(1, 3, 3)),
]
)
TESTS.append(
[
dict(padding_mode="zeros", device=device, image_only=True),
{"img": p(np.arange(9).reshape((1, 3, 3))), "spatial_size": (-1, 0)},
p(np.arange(9).reshape(1, 3, 3)),
]
)
TESTS.append(
[
dict(padding_mode="zeros", device=device),
{"img": p(np.arange(4).reshape((1, 2, 2)))},
p(np.arange(4).reshape(1, 2, 2)),
]
)
TESTS.append(
[
dict(padding_mode="zeros", device=device),
{"img": p(np.arange(4).reshape((1, 2, 2))), "spatial_size": (4, 4)},
p(np.array([[[0.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 2.0, 3.0, 0.0], [0.0, 0.0, 0.0, 0.0]]])),
]
)
TESTS.append(
[
dict(rotate_params=[np.pi / 2], padding_mode="zeros", device=device),
{"img": p(np.arange(4).reshape((1, 2, 2))), "spatial_size": (4, 4)},
p(np.array([[[0.0, 0.0, 0.0, 0.0], [0.0, 2.0, 0.0, 0.0], [0.0, 3.0, 1.0, 0.0], [0.0, 0.0, 0.0, 0.0]]])),
]
)
TESTS.append(
[
dict(
affine=p(torch.tensor([[0.0, -1.0, 0.0], [1.0, 0.0, 0.0], [0.0, 0.0, 1.0]])),
padding_mode="zeros",
device=device,
),
{"img": p(np.arange(4).reshape((1, 2, 2))), "spatial_size": (4, 4)},
p(np.array([[[0.0, 0.0, 0.0, 0.0], [0.0, 2.0, 0.0, 0.0], [0.0, 3.0, 1.0, 0.0], [0.0, 0.0, 0.0, 0.0]]])),
]
)
TESTS.append(
[
dict(padding_mode="zeros", device=device),
{"img": p(np.arange(27).reshape((1, 3, 3, 3))), "spatial_size": (-1, 0, 0)},
p(np.arange(27).reshape(1, 3, 3, 3)),
]
)
TESTS.append(
[
dict(padding_mode="zeros", device=device),
{"img": p(np.arange(8).reshape((1, 2, 2, 2))), "spatial_size": (4, 4, 4)},
p(
np.array(
[
[
[
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
],
[
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 1.0, 0.0],
[0.0, 2.0, 3.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
],
[
[0.0, 0.0, 0.0, 0.0],
[0.0, 4.0, 5.0, 0.0],
[0.0, 6.0, 7.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
],
[
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
],
]
]
)
),
]
)
TESTS.append(
[
dict(rotate_params=[np.pi / 2], padding_mode="zeros", device=device),
{"img": p(np.arange(8).reshape((1, 2, 2, 2))), "spatial_size": (4, 4, 4)},
p(
np.array(
[
[
[
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
],
[
[0.0, 0.0, 0.0, 0.0],
[0.0, 2.0, 0.0, 0.0],
[0.0, 3.0, 1.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
],
[
[0.0, 0.0, 0.0, 0.0],
[0.0, 6.0, 4.0, 0.0],
[0.0, 7.0, 5.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
],
[
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
[0.0, 0.0, 0.0, 0.0],
],
]
]
)
),
]
)
class TestAffine(unittest.TestCase):
@parameterized.expand(TESTS)
def test_affine(self, input_param, input_data, expected_val):
input_copy = deepcopy(input_data["img"])
g = Affine(**input_param)
result = g(**input_data)
if isinstance(result, tuple):
result = result[0]
test_local_inversion(g, result, input_copy)
assert_allclose(result, expected_val, rtol=1e-4, atol=1e-4, type_test=False)
set_track_meta(False)
result = g(**input_data)
if isinstance(result, tuple):
result = result[0]
self.assertNotIsInstance(result, MetaTensor)
self.assertIsInstance(result, torch.Tensor)
set_track_meta(True)
if __name__ == "__main__":
unittest.main()