https://github.com/galaxyproject/galaxy
Tip revision: 71ebf96cba8483a91c197241b161fa61a4fe7fe8 authored by John Chilton on 15 January 2015, 21:01:18 UTC
Bugfix: Skip extra wrapping around template-style macros.
Bugfix: Skip extra wrapping around template-style macros.
Tip revision: 71ebf96
worm_modencode.xml
<?xml version="1.0"?>
<tool name="modENCODE worm" id="modENCODEworm" tool_type="data_source">
<description>server</description>
<command interpreter="python">data_source.py $output $__app__.config.output_size_limit</command>
<inputs action="http://modencode.oicr.on.ca/fgb2/gbrowse/worm" check_values="false" target="_top">
<display>go to modENCODE worm server $GALAXY_URL</display>
<param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=modENCODEworm" />
</inputs>
<request_param_translation>
<request_param galaxy_name="dbkey" remote_name="dbkey" missing="ce6" >
<value_translation>
<value galaxy_value="ce6" remote_value="worm" />
</value_translation>
</request_param>
<request_param galaxy_name="URL" remote_name="URL" missing="">
<append_param separator="&" first_separator="?" join="=">
<value name="d" missing="" />
<value name="dbkey" missing="ce6" />
<value name="q" missing="" />
<value name="s" missing="" />
<value name="t" missing="" />
</append_param>
</request_param>
<request_param galaxy_name="URL_method" remote_name="URL_method" missing="post" />
<request_param galaxy_name="data_type" remote_name="data_type" missing="auto" />
</request_param_translation>
<uihints minwidth="800"/>
<outputs>
<data name="output" format="txt" label="${tool.name} on $getVar( 'q', 'unknown position' )"/>
</outputs>
<options sanitize="False" refresh="True"/>
</tool>