https://github.com/geodynamics/citcoms
Tip revision: 4b218376a98eb42d60f087acd7cb3240136aceaf authored by Eh Tan on 26 March 2007, 18:48:58 UTC
Recreated v2.2.0 tag
Recreated v2.2.0 tag
Tip revision: 4b21837
autocombine.py
#!/usr/bin/env python
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#
#<LicenseText>
#
# CitcomS.py by Eh Tan, Eun-seo Choi, and Pururav Thoutireddy.
# Copyright (C) 2002-2005, California Institute of Technology.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
#
#</LicenseText>
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
'''Automatically find the input parameters from CitcomS input file and run
'batchcombine.py'
usage: autocombine.py machinefile inputfile step1 [step2 [...] ]
'''
# default values for CitcomS input
defaults = {'output_format': 'ascii',
'nprocx': 1,
'nprocy': 1,
'nprocz': 1,
'nodex': 9,
'nodey': 9,
'nodez': 9}
if __name__ == '__main__':
import sys
import batchcombine as bc
if len(sys.argv) < 4:
print __doc__
sys.exit(1)
machinefile = sys.argv[1]
inputfile = sys.argv[2]
timesteps = [int(i) for i in sys.argv[3:]]
# parse input
from parser import Parser
parser = Parser(defaults)
parser.read(inputfile)
datadir = parser.getstr('datadir')
datafile = parser.getstr('datafile')
output_format = parser.getstr('output_format')
if output_format != 'ascii':
print "Error: don't know how to combine the output", \
"(output_format=%s)" % output_format
sys.exit(1)
nodex = parser.getint('nodex')
nodey = parser.getint('nodey')
nodez = parser.getint('nodez')
ncap = parser.getint('nproc_surf')
nprocx = parser.getint('nprocx')
nprocy = parser.getint('nprocy')
nprocz = parser.getint('nprocz')
totalnodes = nprocx * nprocy * nprocz * ncap
nodelist = bc.machinefile2nodes(machinefile, totalnodes)
for timestep in timesteps:
bc.combine(nodelist, datadir, datafile, timestep,
nodex, nodey, nodez,
ncap, nprocx, nprocy, nprocz)
# version
# $Id$
# End of file