https://github.com/hendrikweisser/Fido
Tip revision: be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 authored by hendrikweisser on 25 September 2015, 13:04:51 UTC
Merge pull request #2 from timosachsenberg/master
Merge pull request #2 from timosachsenberg/master
Tip revision: be99c1c
CMakeLists.txt
cmake_minimum_required(VERSION 2.8.3 FATAL_ERROR)
project(fido)
if(NOT CMAKE_BUILD_TYPE) ## "DEBUG" is the default
set(CMAKE_BUILD_TYPE "Release")
endif()
include(CheckCXXCompilerFlag)
check_cxx_compiler_flag("-Wall" HAS_WALL)
if(HAS_WALL)
set(CMAKE_CXX_FLAGS_RELEASE "${CMAKE_CXX_FLAGS_RELEASE} -Wall")
endif()
set(Fido_sources
src/Set.cpp
src/Vector.cpp
src/Numerical.cpp
src/Matrix.cpp
src/GramSchmidt.cpp
src/LPSolver.cpp
src/ForwardSampler.cpp
src/Random.cpp
src/ProteinIdentifier.cpp
src/BasicBigraph.cpp
src/BasicGroupBigraph.cpp
src/GroupPowerBigraph.cpp
src/PeptideFeatureReader.cpp
src/KDMethod.cpp
src/PivdoSplitter.cpp
src/InputFileShrinker.cpp
)
if (WIN32) ## on Windows, add "getopt" (Linux/Mac have "unistd.h")
set(Fido_sources ${Fido_sources} src/win/getopt.c)
endif()
include_directories(${PROJECT_SOURCE_DIR}/src)
add_executable(Fido src/mainFido.cpp ${Fido_sources})
add_executable(FidoChooseParameters src/mainFido_ChooseParameters.cpp ${Fido_sources})