https://github.com/morrislab/phylowgs
Tip revision: 2205be16e9ad68426e837229b593f47e36b3547e authored by Jeff Wintersinger on 29 September 2019, 15:37:35 UTC
Make discarding superclones optional.
Make discarding superclones optional.
Tip revision: 2205be1
emptysim.5.200.200.ssm.txt
id gene a d mu_r mu_v
s0 S0 135 200 0.999 0.5
s1 S1 122 201 0.999 0.5
s2 S2 131 200 0.999 0.5
s3 S3 128 195 0.999 0.5
s4 S4 135 200 0.999 0.5
s5 S5 137 205 0.999 0.5
s6 S6 128 200 0.999 0.5
s7 S7 139 200 0.999 0.5
s8 S8 142 197 0.999 0.5
s9 S9 147 233 0.999 0.5
s10 S10 143 195 0.999 0.5
s11 S11 136 202 0.999 0.5
s12 S12 146 217 0.999 0.5
s13 S13 115 173 0.999 0.5
s14 S14 154 218 0.999 0.5
s15 S15 132 201 0.999 0.5
s16 S16 127 192 0.999 0.5
s17 S17 142 203 0.999 0.5
s18 S18 127 187 0.999 0.5
s19 S19 132 179 0.999 0.5
s20 S20 124 181 0.999 0.5
s21 S21 123 183 0.999 0.5
s22 S22 139 190 0.999 0.5
s23 S23 116 186 0.999 0.5
s24 S24 139 199 0.999 0.5
s25 S25 152 210 0.999 0.5
s26 S26 129 197 0.999 0.5
s27 S27 145 209 0.999 0.5
s28 S28 142 222 0.999 0.5
s29 S29 141 203 0.999 0.5
s30 S30 127 196 0.999 0.5
s31 S31 123 204 0.999 0.5
s32 S32 148 224 0.999 0.5
s33 S33 131 188 0.999 0.5
s34 S34 146 217 0.999 0.5
s35 S35 154 212 0.999 0.5
s36 S36 174 237 0.999 0.5
s37 S37 155 217 0.999 0.5
s38 S38 130 193 0.999 0.5
s39 S39 118 180 0.999 0.5
s40 S40 140 202 0.999 0.5
s41 S41 133 197 0.999 0.5
s42 S42 117 177 0.999 0.5
s43 S43 146 194 0.999 0.5
s44 S44 112 182 0.999 0.5
s45 S45 136 197 0.999 0.5
s46 S46 127 192 0.999 0.5
s47 S47 129 203 0.999 0.5
s48 S48 168 240 0.999 0.5
s49 S49 109 177 0.999 0.5
s50 S50 134 198 0.999 0.5
s51 S51 116 174 0.999 0.5
s52 S52 134 195 0.999 0.5
s53 S53 151 225 0.999 0.5
s54 S54 134 202 0.999 0.5
s55 S55 134 206 0.999 0.5
s56 S56 110 172 0.999 0.5
s57 S57 123 182 0.999 0.5
s58 S58 141 198 0.999 0.5
s59 S59 145 198 0.999 0.5
s60 S60 145 212 0.999 0.5
s61 S61 156 218 0.999 0.5
s62 S62 137 201 0.999 0.5
s63 S63 126 194 0.999 0.5
s64 S64 157 228 0.999 0.5
s65 S65 122 181 0.999 0.5
s66 S66 134 192 0.999 0.5
s67 S67 121 184 0.999 0.5
s68 S68 132 202 0.999 0.5
s69 S69 139 208 0.999 0.5
s70 S70 135 193 0.999 0.5
s71 S71 154 216 0.999 0.5
s72 S72 138 200 0.999 0.5
s73 S73 115 185 0.999 0.5
s74 S74 133 200 0.999 0.5
s75 S75 128 181 0.999 0.5
s76 S76 132 186 0.999 0.5
s77 S77 159 219 0.999 0.5
s78 S78 153 219 0.999 0.5
s79 S79 139 209 0.999 0.5
s80 S80 122 168 0.999 0.5
s81 S81 149 218 0.999 0.5
s82 S82 145 201 0.999 0.5
s83 S83 125 185 0.999 0.5
s84 S84 133 208 0.999 0.5
s85 S85 155 214 0.999 0.5
s86 S86 141 208 0.999 0.5
s87 S87 151 234 0.999 0.5
s88 S88 122 192 0.999 0.5
s89 S89 143 222 0.999 0.5
s90 S90 125 193 0.999 0.5
s91 S91 142 204 0.999 0.5
s92 S92 146 209 0.999 0.5
s93 S93 125 203 0.999 0.5
s94 S94 123 191 0.999 0.5
s95 S95 135 195 0.999 0.5
s96 S96 144 205 0.999 0.5
s97 S97 130 202 0.999 0.5
s98 S98 134 198 0.999 0.5
s99 S99 132 199 0.999 0.5
s100 S100 119 184 0.999 0.5
s101 S101 119 202 0.999 0.5
s102 S102 142 214 0.999 0.5
s103 S103 129 191 0.999 0.5
s104 S104 140 197 0.999 0.5
s105 S105 123 198 0.999 0.5
s106 S106 139 195 0.999 0.5
s107 S107 156 220 0.999 0.5
s108 S108 145 227 0.999 0.5
s109 S109 118 181 0.999 0.5
s110 S110 142 218 0.999 0.5
s111 S111 178 233 0.999 0.5
s112 S112 159 213 0.999 0.5
s113 S113 122 178 0.999 0.5
s114 S114 120 194 0.999 0.5
s115 S115 135 191 0.999 0.5
s116 S116 154 207 0.999 0.5
s117 S117 131 179 0.999 0.5
s118 S118 126 191 0.999 0.5
s119 S119 141 201 0.999 0.5
s120 S120 120 185 0.999 0.5
s121 S121 116 170 0.999 0.5
s122 S122 125 222 0.999 0.5
s123 S123 134 182 0.999 0.5
s124 S124 147 209 0.999 0.5
s125 S125 139 203 0.999 0.5
s126 S126 138 196 0.999 0.5
s127 S127 132 208 0.999 0.5
s128 S128 126 189 0.999 0.5
s129 S129 119 201 0.999 0.5
s130 S130 120 192 0.999 0.5
s131 S131 144 198 0.999 0.5
s132 S132 117 189 0.999 0.5
s133 S133 130 199 0.999 0.5
s134 S134 141 206 0.999 0.5
s135 S135 156 219 0.999 0.5
s136 S136 124 190 0.999 0.5
s137 S137 119 184 0.999 0.5
s138 S138 146 218 0.999 0.5
s139 S139 128 212 0.999 0.5
s140 S140 135 191 0.999 0.5
s141 S141 128 200 0.999 0.5
s142 S142 126 185 0.999 0.5
s143 S143 146 212 0.999 0.5
s144 S144 149 205 0.999 0.5
s145 S145 170 242 0.999 0.5
s146 S146 154 217 0.999 0.5
s147 S147 140 200 0.999 0.5
s148 S148 137 208 0.999 0.5
s149 S149 137 192 0.999 0.5
s150 S150 148 194 0.999 0.5
s151 S151 141 201 0.999 0.5
s152 S152 138 215 0.999 0.5
s153 S153 131 204 0.999 0.5
s154 S154 122 184 0.999 0.5
s155 S155 130 201 0.999 0.5
s156 S156 136 194 0.999 0.5
s157 S157 130 189 0.999 0.5
s158 S158 133 192 0.999 0.5
s159 S159 154 216 0.999 0.5
s160 S160 165 220 0.999 0.5
s161 S161 132 205 0.999 0.5
s162 S162 154 214 0.999 0.5
s163 S163 129 195 0.999 0.5
s164 S164 140 215 0.999 0.5
s165 S165 130 198 0.999 0.5
s166 S166 145 216 0.999 0.5
s167 S167 122 186 0.999 0.5
s168 S168 150 218 0.999 0.5
s169 S169 127 196 0.999 0.5
s170 S170 139 212 0.999 0.5
s171 S171 137 205 0.999 0.5
s172 S172 135 197 0.999 0.5
s173 S173 121 183 0.999 0.5
s174 S174 119 187 0.999 0.5
s175 S175 144 220 0.999 0.5
s176 S176 140 202 0.999 0.5
s177 S177 123 192 0.999 0.5
s178 S178 127 204 0.999 0.5
s179 S179 122 181 0.999 0.5
s180 S180 107 172 0.999 0.5
s181 S181 145 210 0.999 0.5
s182 S182 130 182 0.999 0.5
s183 S183 125 192 0.999 0.5
s184 S184 118 198 0.999 0.5
s185 S185 116 194 0.999 0.5
s186 S186 126 191 0.999 0.5
s187 S187 180 247 0.999 0.5
s188 S188 121 183 0.999 0.5
s189 S189 144 208 0.999 0.5
s190 S190 135 197 0.999 0.5
s191 S191 139 192 0.999 0.5
s192 S192 110 167 0.999 0.5
s193 S193 139 200 0.999 0.5
s194 S194 139 201 0.999 0.5
s195 S195 136 206 0.999 0.5
s196 S196 154 218 0.999 0.5
s197 S197 126 198 0.999 0.5
s198 S198 124 185 0.999 0.5
s199 S199 139 216 0.999 0.5
s200 S200 176 215 0.999 0.5
s201 S201 160 190 0.999 0.5
s202 S202 178 219 0.999 0.5
s203 S203 162 197 0.999 0.5
s204 S204 140 174 0.999 0.5
s205 S205 161 198 0.999 0.5
s206 S206 166 210 0.999 0.5
s207 S207 167 203 0.999 0.5
s208 S208 165 202 0.999 0.5
s209 S209 150 183 0.999 0.5
s210 S210 172 208 0.999 0.5
s211 S211 195 229 0.999 0.5
s212 S212 173 213 0.999 0.5
s213 S213 160 185 0.999 0.5
s214 S214 152 187 0.999 0.5
s215 S215 136 178 0.999 0.5
s216 S216 168 207 0.999 0.5
s217 S217 197 228 0.999 0.5
s218 S218 170 212 0.999 0.5
s219 S219 153 185 0.999 0.5
s220 S220 178 220 0.999 0.5
s221 S221 193 226 0.999 0.5
s222 S222 180 219 0.999 0.5
s223 S223 157 205 0.999 0.5
s224 S224 165 207 0.999 0.5
s225 S225 179 224 0.999 0.5
s226 S226 171 203 0.999 0.5
s227 S227 175 222 0.999 0.5
s228 S228 157 196 0.999 0.5
s229 S229 151 185 0.999 0.5
s230 S230 169 206 0.999 0.5
s231 S231 165 200 0.999 0.5
s232 S232 156 191 0.999 0.5
s233 S233 162 205 0.999 0.5
s234 S234 177 222 0.999 0.5
s235 S235 159 199 0.999 0.5
s236 S236 166 209 0.999 0.5
s237 S237 157 187 0.999 0.5
s238 S238 171 209 0.999 0.5
s239 S239 152 187 0.999 0.5
s240 S240 157 205 0.999 0.5
s241 S241 166 216 0.999 0.5
s242 S242 157 185 0.999 0.5
s243 S243 165 201 0.999 0.5
s244 S244 162 197 0.999 0.5
s245 S245 175 211 0.999 0.5
s246 S246 158 192 0.999 0.5
s247 S247 174 220 0.999 0.5
s248 S248 176 218 0.999 0.5
s249 S249 194 230 0.999 0.5
s250 S250 161 199 0.999 0.5
s251 S251 172 211 0.999 0.5
s252 S252 199 239 0.999 0.5
s253 S253 188 232 0.999 0.5
s254 S254 193 235 0.999 0.5
s255 S255 162 186 0.999 0.5
s256 S256 176 200 0.999 0.5
s257 S257 157 192 0.999 0.5
s258 S258 155 200 0.999 0.5
s259 S259 161 191 0.999 0.5
s260 S260 159 198 0.999 0.5
s261 S261 174 215 0.999 0.5
s262 S262 168 201 0.999 0.5
s263 S263 143 178 0.999 0.5
s264 S264 183 226 0.999 0.5
s265 S265 165 206 0.999 0.5
s266 S266 177 221 0.999 0.5
s267 S267 176 218 0.999 0.5
s268 S268 180 220 0.999 0.5
s269 S269 163 202 0.999 0.5
s270 S270 172 215 0.999 0.5
s271 S271 188 218 0.999 0.5
s272 S272 157 193 0.999 0.5
s273 S273 151 192 0.999 0.5
s274 S274 124 171 0.999 0.5
s275 S275 173 201 0.999 0.5
s276 S276 162 198 0.999 0.5
s277 S277 151 194 0.999 0.5
s278 S278 163 203 0.999 0.5
s279 S279 171 220 0.999 0.5
s280 S280 155 195 0.999 0.5
s281 S281 152 197 0.999 0.5
s282 S282 133 173 0.999 0.5
s283 S283 141 184 0.999 0.5
s284 S284 178 215 0.999 0.5
s285 S285 151 187 0.999 0.5
s286 S286 175 221 0.999 0.5
s287 S287 150 189 0.999 0.5
s288 S288 159 196 0.999 0.5
s289 S289 174 203 0.999 0.5
s290 S290 154 187 0.999 0.5
s291 S291 156 194 0.999 0.5
s292 S292 167 198 0.999 0.5
s293 S293 166 202 0.999 0.5
s294 S294 169 203 0.999 0.5
s295 S295 170 204 0.999 0.5
s296 S296 140 177 0.999 0.5
s297 S297 193 237 0.999 0.5
s298 S298 182 212 0.999 0.5
s299 S299 150 188 0.999 0.5
s300 S300 175 199 0.999 0.5
s301 S301 181 217 0.999 0.5
s302 S302 166 214 0.999 0.5
s303 S303 170 210 0.999 0.5
s304 S304 152 185 0.999 0.5
s305 S305 161 196 0.999 0.5
s306 S306 152 190 0.999 0.5
s307 S307 175 205 0.999 0.5
s308 S308 163 187 0.999 0.5
s309 S309 167 210 0.999 0.5
s310 S310 155 202 0.999 0.5
s311 S311 162 188 0.999 0.5
s312 S312 154 190 0.999 0.5
s313 S313 162 196 0.999 0.5
s314 S314 152 208 0.999 0.5
s315 S315 141 172 0.999 0.5
s316 S316 154 197 0.999 0.5
s317 S317 133 167 0.999 0.5
s318 S318 144 186 0.999 0.5
s319 S319 170 199 0.999 0.5
s320 S320 151 184 0.999 0.5
s321 S321 149 199 0.999 0.5
s322 S322 163 202 0.999 0.5
s323 S323 176 216 0.999 0.5
s324 S324 166 200 0.999 0.5
s325 S325 167 207 0.999 0.5
s326 S326 148 181 0.999 0.5
s327 S327 173 203 0.999 0.5
s328 S328 177 205 0.999 0.5
s329 S329 167 215 0.999 0.5
s330 S330 161 196 0.999 0.5
s331 S331 176 208 0.999 0.5
s332 S332 177 214 0.999 0.5
s333 S333 163 204 0.999 0.5
s334 S334 190 222 0.999 0.5
s335 S335 148 190 0.999 0.5
s336 S336 157 194 0.999 0.5
s337 S337 152 189 0.999 0.5
s338 S338 172 209 0.999 0.5
s339 S339 166 213 0.999 0.5
s340 S340 154 194 0.999 0.5
s341 S341 149 195 0.999 0.5
s342 S342 161 196 0.999 0.5
s343 S343 156 189 0.999 0.5
s344 S344 148 179 0.999 0.5
s345 S345 157 197 0.999 0.5
s346 S346 179 214 0.999 0.5
s347 S347 163 197 0.999 0.5
s348 S348 184 216 0.999 0.5
s349 S349 159 200 0.999 0.5
s350 S350 145 185 0.999 0.5
s351 S351 165 207 0.999 0.5
s352 S352 137 172 0.999 0.5
s353 S353 159 184 0.999 0.5
s354 S354 171 211 0.999 0.5
s355 S355 164 203 0.999 0.5
s356 S356 157 196 0.999 0.5
s357 S357 177 213 0.999 0.5
s358 S358 153 189 0.999 0.5
s359 S359 177 213 0.999 0.5
s360 S360 148 184 0.999 0.5
s361 S361 154 185 0.999 0.5
s362 S362 153 194 0.999 0.5
s363 S363 175 213 0.999 0.5
s364 S364 164 214 0.999 0.5
s365 S365 150 179 0.999 0.5
s366 S366 174 216 0.999 0.5
s367 S367 153 188 0.999 0.5
s368 S368 165 221 0.999 0.5
s369 S369 177 213 0.999 0.5
s370 S370 174 210 0.999 0.5
s371 S371 180 209 0.999 0.5
s372 S372 156 202 0.999 0.5
s373 S373 166 210 0.999 0.5
s374 S374 160 197 0.999 0.5
s375 S375 158 190 0.999 0.5
s376 S376 155 178 0.999 0.5
s377 S377 156 198 0.999 0.5
s378 S378 128 161 0.999 0.5
s379 S379 142 195 0.999 0.5
s380 S380 171 215 0.999 0.5
s381 S381 156 190 0.999 0.5
s382 S382 158 197 0.999 0.5
s383 S383 142 180 0.999 0.5
s384 S384 167 201 0.999 0.5
s385 S385 163 203 0.999 0.5
s386 S386 150 189 0.999 0.5
s387 S387 164 207 0.999 0.5
s388 S388 169 204 0.999 0.5
s389 S389 159 194 0.999 0.5
s390 S390 157 186 0.999 0.5
s391 S391 180 222 0.999 0.5
s392 S392 159 193 0.999 0.5
s393 S393 134 160 0.999 0.5
s394 S394 152 197 0.999 0.5
s395 S395 147 185 0.999 0.5
s396 S396 155 190 0.999 0.5
s397 S397 159 196 0.999 0.5
s398 S398 136 165 0.999 0.5
s399 S399 157 188 0.999 0.5
s400 S400 186 206 0.999 0.5
s401 S401 166 186 0.999 0.5
s402 S402 174 197 0.999 0.5
s403 S403 171 186 0.999 0.5
s404 S404 184 194 0.999 0.5
s405 S405 155 167 0.999 0.5
s406 S406 206 219 0.999 0.5
s407 S407 169 185 0.999 0.5
s408 S408 149 171 0.999 0.5
s409 S409 179 205 0.999 0.5
s410 S410 181 200 0.999 0.5
s411 S411 187 201 0.999 0.5
s412 S412 206 226 0.999 0.5
s413 S413 193 212 0.999 0.5
s414 S414 161 181 0.999 0.5
s415 S415 179 196 0.999 0.5
s416 S416 182 195 0.999 0.5
s417 S417 182 198 0.999 0.5
s418 S418 197 216 0.999 0.5
s419 S419 167 184 0.999 0.5
s420 S420 191 207 0.999 0.5
s421 S421 170 188 0.999 0.5
s422 S422 184 196 0.999 0.5
s423 S423 166 187 0.999 0.5
s424 S424 193 211 0.999 0.5
s425 S425 162 174 0.999 0.5
s426 S426 155 167 0.999 0.5
s427 S427 192 215 0.999 0.5
s428 S428 177 199 0.999 0.5
s429 S429 196 213 0.999 0.5
s430 S430 168 179 0.999 0.5
s431 S431 189 209 0.999 0.5
s432 S432 190 210 0.999 0.5
s433 S433 203 231 0.999 0.5
s434 S434 165 184 0.999 0.5
s435 S435 183 203 0.999 0.5
s436 S436 158 184 0.999 0.5
s437 S437 174 193 0.999 0.5
s438 S438 169 196 0.999 0.5
s439 S439 184 199 0.999 0.5
s440 S440 172 191 0.999 0.5
s441 S441 195 210 0.999 0.5
s442 S442 175 192 0.999 0.5
s443 S443 191 216 0.999 0.5
s444 S444 177 188 0.999 0.5
s445 S445 188 206 0.999 0.5
s446 S446 191 210 0.999 0.5
s447 S447 199 213 0.999 0.5
s448 S448 163 181 0.999 0.5
s449 S449 178 190 0.999 0.5
s450 S450 170 184 0.999 0.5
s451 S451 194 217 0.999 0.5
s452 S452 169 195 0.999 0.5
s453 S453 175 188 0.999 0.5
s454 S454 211 226 0.999 0.5
s455 S455 170 188 0.999 0.5
s456 S456 192 207 0.999 0.5
s457 S457 198 214 0.999 0.5
s458 S458 195 212 0.999 0.5
s459 S459 183 196 0.999 0.5
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s465 S465 159 173 0.999 0.5
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s531 S531 174 189 0.999 0.5
s532 S532 178 196 0.999 0.5
s533 S533 191 204 0.999 0.5
s534 S534 171 198 0.999 0.5
s535 S535 190 212 0.999 0.5
s536 S536 177 193 0.999 0.5
s537 S537 188 214 0.999 0.5
s538 S538 171 186 0.999 0.5
s539 S539 171 191 0.999 0.5
s540 S540 176 192 0.999 0.5
s541 S541 183 200 0.999 0.5
s542 S542 199 215 0.999 0.5
s543 S543 173 188 0.999 0.5
s544 S544 165 185 0.999 0.5
s545 S545 181 200 0.999 0.5
s546 S546 186 199 0.999 0.5
s547 S547 165 181 0.999 0.5
s548 S548 165 184 0.999 0.5
s549 S549 166 176 0.999 0.5
s550 S550 178 196 0.999 0.5
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s552 S552 188 215 0.999 0.5
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s561 S561 173 196 0.999 0.5
s562 S562 166 186 0.999 0.5
s563 S563 177 199 0.999 0.5
s564 S564 175 187 0.999 0.5
s565 S565 181 197 0.999 0.5
s566 S566 198 220 0.999 0.5
s567 S567 169 185 0.999 0.5
s568 S568 179 194 0.999 0.5
s569 S569 195 215 0.999 0.5
s570 S570 175 198 0.999 0.5
s571 S571 174 199 0.999 0.5
s572 S572 180 197 0.999 0.5
s573 S573 185 199 0.999 0.5
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