https://github.com/morrislab/phylowgs
Tip revision: 2205be16e9ad68426e837229b593f47e36b3547e authored by Jeff Wintersinger on 29 September 2019, 15:37:35 UTC
Make discarding superclones optional.
Make discarding superclones optional.
Tip revision: 2205be1
emptysim.5.300.100.ssm.txt
id gene a d mu_r mu_v
s0 S0 191 278 0.999 0.5
s1 S1 235 344 0.999 0.5
s2 S2 202 280 0.999 0.5
s3 S3 199 305 0.999 0.5
s4 S4 196 296 0.999 0.5
s5 S5 200 296 0.999 0.5
s6 S6 187 300 0.999 0.5
s7 S7 216 305 0.999 0.5
s8 S8 203 317 0.999 0.5
s9 S9 214 313 0.999 0.5
s10 S10 204 288 0.999 0.5
s11 S11 215 300 0.999 0.5
s12 S12 213 306 0.999 0.5
s13 S13 178 277 0.999 0.5
s14 S14 223 324 0.999 0.5
s15 S15 215 302 0.999 0.5
s16 S16 189 288 0.999 0.5
s17 S17 208 324 0.999 0.5
s18 S18 199 298 0.999 0.5
s19 S19 185 268 0.999 0.5
s20 S20 215 295 0.999 0.5
s21 S21 204 308 0.999 0.5
s22 S22 214 312 0.999 0.5
s23 S23 202 306 0.999 0.5
s24 S24 205 296 0.999 0.5
s25 S25 212 304 0.999 0.5
s26 S26 217 315 0.999 0.5
s27 S27 235 335 0.999 0.5
s28 S28 201 297 0.999 0.5
s29 S29 211 308 0.999 0.5
s30 S30 200 298 0.999 0.5
s31 S31 209 295 0.999 0.5
s32 S32 204 323 0.999 0.5
s33 S33 208 300 0.999 0.5
s34 S34 183 270 0.999 0.5
s35 S35 210 312 0.999 0.5
s36 S36 200 287 0.999 0.5
s37 S37 208 307 0.999 0.5
s38 S38 201 291 0.999 0.5
s39 S39 192 299 0.999 0.5
s40 S40 188 285 0.999 0.5
s41 S41 228 317 0.999 0.5
s42 S42 190 303 0.999 0.5
s43 S43 221 342 0.999 0.5
s44 S44 206 296 0.999 0.5
s45 S45 178 271 0.999 0.5
s46 S46 210 296 0.999 0.5
s47 S47 214 328 0.999 0.5
s48 S48 206 302 0.999 0.5
s49 S49 202 295 0.999 0.5
s50 S50 186 269 0.999 0.5
s51 S51 195 285 0.999 0.5
s52 S52 201 305 0.999 0.5
s53 S53 204 308 0.999 0.5
s54 S54 221 326 0.999 0.5
s55 S55 196 286 0.999 0.5
s56 S56 203 305 0.999 0.5
s57 S57 247 349 0.999 0.5
s58 S58 212 307 0.999 0.5
s59 S59 186 284 0.999 0.5
s60 S60 213 306 0.999 0.5
s61 S61 195 292 0.999 0.5
s62 S62 210 309 0.999 0.5
s63 S63 193 284 0.999 0.5
s64 S64 215 322 0.999 0.5
s65 S65 200 300 0.999 0.5
s66 S66 205 302 0.999 0.5
s67 S67 195 291 0.999 0.5
s68 S68 233 312 0.999 0.5
s69 S69 194 300 0.999 0.5
s70 S70 197 287 0.999 0.5
s71 S71 184 274 0.999 0.5
s72 S72 215 314 0.999 0.5
s73 S73 227 319 0.999 0.5
s74 S74 225 328 0.999 0.5
s75 S75 201 299 0.999 0.5
s76 S76 201 306 0.999 0.5
s77 S77 192 286 0.999 0.5
s78 S78 223 315 0.999 0.5
s79 S79 177 258 0.999 0.5
s80 S80 194 303 0.999 0.5
s81 S81 225 317 0.999 0.5
s82 S82 209 311 0.999 0.5
s83 S83 192 296 0.999 0.5
s84 S84 200 315 0.999 0.5
s85 S85 205 308 0.999 0.5
s86 S86 206 298 0.999 0.5
s87 S87 210 304 0.999 0.5
s88 S88 215 300 0.999 0.5
s89 S89 210 288 0.999 0.5
s90 S90 216 299 0.999 0.5
s91 S91 210 315 0.999 0.5
s92 S92 200 284 0.999 0.5
s93 S93 212 293 0.999 0.5
s94 S94 208 302 0.999 0.5
s95 S95 212 311 0.999 0.5
s96 S96 202 289 0.999 0.5
s97 S97 213 301 0.999 0.5
s98 S98 244 362 0.999 0.5
s99 S99 189 282 0.999 0.5
s100 S100 270 332 0.999 0.5
s101 S101 244 301 0.999 0.5
s102 S102 242 292 0.999 0.5
s103 S103 217 262 0.999 0.5
s104 S104 249 297 0.999 0.5
s105 S105 248 299 0.999 0.5
s106 S106 235 294 0.999 0.5
s107 S107 258 330 0.999 0.5
s108 S108 253 305 0.999 0.5
s109 S109 262 312 0.999 0.5
s110 S110 251 321 0.999 0.5
s111 S111 240 310 0.999 0.5
s112 S112 260 306 0.999 0.5
s113 S113 248 282 0.999 0.5
s114 S114 259 320 0.999 0.5
s115 S115 251 306 0.999 0.5
s116 S116 261 316 0.999 0.5
s117 S117 234 296 0.999 0.5
s118 S118 250 313 0.999 0.5
s119 S119 240 298 0.999 0.5
s120 S120 249 311 0.999 0.5
s121 S121 239 289 0.999 0.5
s122 S122 242 297 0.999 0.5
s123 S123 205 263 0.999 0.5
s124 S124 241 307 0.999 0.5
s125 S125 265 313 0.999 0.5
s126 S126 246 306 0.999 0.5
s127 S127 256 307 0.999 0.5
s128 S128 233 292 0.999 0.5
s129 S129 252 309 0.999 0.5
s130 S130 226 282 0.999 0.5
s131 S131 251 300 0.999 0.5
s132 S132 237 296 0.999 0.5
s133 S133 254 316 0.999 0.5
s134 S134 212 266 0.999 0.5
s135 S135 245 311 0.999 0.5
s136 S136 255 313 0.999 0.5
s137 S137 241 297 0.999 0.5
s138 S138 234 284 0.999 0.5
s139 S139 255 310 0.999 0.5
s140 S140 252 313 0.999 0.5
s141 S141 237 300 0.999 0.5
s142 S142 201 252 0.999 0.5
s143 S143 251 293 0.999 0.5
s144 S144 264 306 0.999 0.5
s145 S145 238 290 0.999 0.5
s146 S146 234 290 0.999 0.5
s147 S147 246 298 0.999 0.5
s148 S148 220 288 0.999 0.5
s149 S149 267 326 0.999 0.5
s150 S150 234 290 0.999 0.5
s151 S151 253 318 0.999 0.5
s152 S152 238 296 0.999 0.5
s153 S153 257 312 0.999 0.5
s154 S154 263 318 0.999 0.5
s155 S155 212 263 0.999 0.5
s156 S156 239 298 0.999 0.5
s157 S157 261 316 0.999 0.5
s158 S158 248 303 0.999 0.5
s159 S159 265 326 0.999 0.5
s160 S160 236 293 0.999 0.5
s161 S161 265 316 0.999 0.5
s162 S162 240 306 0.999 0.5
s163 S163 240 299 0.999 0.5
s164 S164 237 310 0.999 0.5
s165 S165 234 288 0.999 0.5
s166 S166 237 301 0.999 0.5
s167 S167 249 291 0.999 0.5
s168 S168 246 322 0.999 0.5
s169 S169 229 284 0.999 0.5
s170 S170 232 292 0.999 0.5
s171 S171 249 305 0.999 0.5
s172 S172 248 289 0.999 0.5
s173 S173 238 291 0.999 0.5
s174 S174 226 281 0.999 0.5
s175 S175 241 310 0.999 0.5
s176 S176 243 304 0.999 0.5
s177 S177 259 325 0.999 0.5
s178 S178 244 285 0.999 0.5
s179 S179 266 323 0.999 0.5
s180 S180 215 280 0.999 0.5
s181 S181 239 284 0.999 0.5
s182 S182 260 325 0.999 0.5
s183 S183 213 268 0.999 0.5
s184 S184 261 321 0.999 0.5
s185 S185 234 281 0.999 0.5
s186 S186 258 315 0.999 0.5
s187 S187 232 282 0.999 0.5
s188 S188 244 305 0.999 0.5
s189 S189 248 303 0.999 0.5
s190 S190 217 269 0.999 0.5
s191 S191 267 328 0.999 0.5
s192 S192 240 290 0.999 0.5
s193 S193 225 282 0.999 0.5
s194 S194 246 307 0.999 0.5
s195 S195 234 289 0.999 0.5
s196 S196 226 284 0.999 0.5
s197 S197 205 270 0.999 0.5
s198 S198 290 349 0.999 0.5
s199 S199 258 317 0.999 0.5
s200 S200 268 297 0.999 0.5
s201 S201 233 264 0.999 0.5
s202 S202 266 289 0.999 0.5
s203 S203 280 317 0.999 0.5
s204 S204 299 327 0.999 0.5
s205 S205 273 302 0.999 0.5
s206 S206 241 264 0.999 0.5
s207 S207 243 262 0.999 0.5
s208 S208 279 306 0.999 0.5
s209 S209 284 300 0.999 0.5
s210 S210 276 301 0.999 0.5
s211 S211 275 304 0.999 0.5
s212 S212 267 288 0.999 0.5
s213 S213 259 277 0.999 0.5
s214 S214 296 328 0.999 0.5
s215 S215 274 308 0.999 0.5
s216 S216 279 307 0.999 0.5
s217 S217 257 283 0.999 0.5
s218 S218 270 303 0.999 0.5
s219 S219 299 340 0.999 0.5
s220 S220 272 298 0.999 0.5
s221 S221 269 295 0.999 0.5
s222 S222 291 313 0.999 0.5
s223 S223 281 301 0.999 0.5
s224 S224 275 308 0.999 0.5
s225 S225 263 291 0.999 0.5
s226 S226 258 287 0.999 0.5
s227 S227 293 321 0.999 0.5
s228 S228 288 309 0.999 0.5
s229 S229 271 296 0.999 0.5
s230 S230 301 331 0.999 0.5
s231 S231 290 319 0.999 0.5
s232 S232 263 291 0.999 0.5
s233 S233 286 308 0.999 0.5
s234 S234 251 276 0.999 0.5
s235 S235 292 328 0.999 0.5
s236 S236 246 269 0.999 0.5
s237 S237 276 307 0.999 0.5
s238 S238 263 295 0.999 0.5
s239 S239 284 310 0.999 0.5
s240 S240 285 315 0.999 0.5
s241 S241 248 277 0.999 0.5
s242 S242 272 296 0.999 0.5
s243 S243 259 282 0.999 0.5
s244 S244 301 320 0.999 0.5
s245 S245 279 297 0.999 0.5
s246 S246 272 300 0.999 0.5
s247 S247 292 318 0.999 0.5
s248 S248 250 278 0.999 0.5
s249 S249 267 301 0.999 0.5
s250 S250 275 306 0.999 0.5
s251 S251 256 284 0.999 0.5
s252 S252 288 309 0.999 0.5
s253 S253 286 312 0.999 0.5
s254 S254 313 342 0.999 0.5
s255 S255 257 286 0.999 0.5
s256 S256 267 294 0.999 0.5
s257 S257 272 304 0.999 0.5
s258 S258 259 289 0.999 0.5
s259 S259 291 328 0.999 0.5
s260 S260 261 284 0.999 0.5
s261 S261 275 301 0.999 0.5
s262 S262 261 290 0.999 0.5
s263 S263 274 299 0.999 0.5
s264 S264 284 305 0.999 0.5
s265 S265 256 287 0.999 0.5
s266 S266 248 274 0.999 0.5
s267 S267 261 291 0.999 0.5
s268 S268 297 331 0.999 0.5
s269 S269 262 289 0.999 0.5
s270 S270 274 298 0.999 0.5
s271 S271 258 294 0.999 0.5
s272 S272 275 300 0.999 0.5
s273 S273 272 305 0.999 0.5
s274 S274 269 289 0.999 0.5
s275 S275 274 302 0.999 0.5
s276 S276 272 302 0.999 0.5
s277 S277 297 326 0.999 0.5
s278 S278 263 295 0.999 0.5
s279 S279 288 314 0.999 0.5
s280 S280 277 297 0.999 0.5
s281 S281 274 303 0.999 0.5
s282 S282 274 297 0.999 0.5
s283 S283 261 292 0.999 0.5
s284 S284 266 292 0.999 0.5
s285 S285 283 311 0.999 0.5
s286 S286 287 307 0.999 0.5
s287 S287 273 304 0.999 0.5
s288 S288 260 289 0.999 0.5
s289 S289 242 266 0.999 0.5
s290 S290 304 333 0.999 0.5
s291 S291 277 303 0.999 0.5
s292 S292 269 296 0.999 0.5
s293 S293 260 288 0.999 0.5
s294 S294 258 288 0.999 0.5
s295 S295 281 311 0.999 0.5
s296 S296 262 280 0.999 0.5
s297 S297 254 273 0.999 0.5
s298 S298 301 323 0.999 0.5
s299 S299 254 274 0.999 0.5
s300 S300 268 275 0.999 0.5
s301 S301 292 300 0.999 0.5
s302 S302 272 278 0.999 0.5
s303 S303 298 301 0.999 0.5
s304 S304 277 286 0.999 0.5
s305 S305 278 285 0.999 0.5
s306 S306 281 284 0.999 0.5
s307 S307 298 315 0.999 0.5
s308 S308 283 289 0.999 0.5
s309 S309 314 326 0.999 0.5
s310 S310 280 289 0.999 0.5
s311 S311 281 294 0.999 0.5
s312 S312 272 283 0.999 0.5
s313 S313 298 306 0.999 0.5
s314 S314 307 317 0.999 0.5
s315 S315 288 292 0.999 0.5
s316 S316 295 300 0.999 0.5
s317 S317 305 310 0.999 0.5
s318 S318 277 288 0.999 0.5
s319 S319 287 295 0.999 0.5
s320 S320 274 285 0.999 0.5
s321 S321 265 271 0.999 0.5
s322 S322 275 284 0.999 0.5
s323 S323 296 306 0.999 0.5
s324 S324 307 316 0.999 0.5
s325 S325 315 324 0.999 0.5
s326 S326 309 320 0.999 0.5
s327 S327 304 313 0.999 0.5
s328 S328 284 293 0.999 0.5
s329 S329 289 291 0.999 0.5
s330 S330 293 305 0.999 0.5
s331 S331 315 320 0.999 0.5
s332 S332 292 299 0.999 0.5
s333 S333 282 294 0.999 0.5
s334 S334 238 243 0.999 0.5
s335 S335 267 279 0.999 0.5
s336 S336 296 307 0.999 0.5
s337 S337 312 316 0.999 0.5
s338 S338 302 313 0.999 0.5
s339 S339 284 293 0.999 0.5
s340 S340 295 305 0.999 0.5
s341 S341 292 303 0.999 0.5
s342 S342 306 315 0.999 0.5
s343 S343 299 309 0.999 0.5
s344 S344 300 304 0.999 0.5
s345 S345 275 285 0.999 0.5
s346 S346 292 304 0.999 0.5
s347 S347 288 297 0.999 0.5
s348 S348 288 292 0.999 0.5
s349 S349 275 283 0.999 0.5
s350 S350 300 308 0.999 0.5
s351 S351 281 286 0.999 0.5
s352 S352 291 303 0.999 0.5
s353 S353 312 318 0.999 0.5
s354 S354 300 308 0.999 0.5
s355 S355 318 328 0.999 0.5
s356 S356 286 294 0.999 0.5
s357 S357 269 281 0.999 0.5
s358 S358 276 287 0.999 0.5
s359 S359 297 306 0.999 0.5
s360 S360 298 310 0.999 0.5
s361 S361 287 300 0.999 0.5
s362 S362 271 287 0.999 0.5
s363 S363 300 307 0.999 0.5
s364 S364 295 307 0.999 0.5
s365 S365 289 304 0.999 0.5
s366 S366 293 305 0.999 0.5
s367 S367 286 299 0.999 0.5
s368 S368 291 296 0.999 0.5
s369 S369 279 291 0.999 0.5
s370 S370 273 283 0.999 0.5
s371 S371 270 276 0.999 0.5
s372 S372 312 318 0.999 0.5
s373 S373 301 311 0.999 0.5
s374 S374 265 273 0.999 0.5
s375 S375 291 298 0.999 0.5
s376 S376 318 326 0.999 0.5
s377 S377 296 308 0.999 0.5
s378 S378 306 317 0.999 0.5
s379 S379 259 264 0.999 0.5
s380 S380 265 272 0.999 0.5
s381 S381 246 255 0.999 0.5
s382 S382 296 306 0.999 0.5
s383 S383 270 284 0.999 0.5
s384 S384 307 316 0.999 0.5
s385 S385 292 311 0.999 0.5
s386 S386 298 302 0.999 0.5
s387 S387 312 319 0.999 0.5
s388 S388 267 273 0.999 0.5
s389 S389 273 283 0.999 0.5
s390 S390 277 285 0.999 0.5
s391 S391 303 314 0.999 0.5
s392 S392 298 305 0.999 0.5
s393 S393 313 324 0.999 0.5
s394 S394 290 295 0.999 0.5
s395 S395 292 300 0.999 0.5
s396 S396 319 329 0.999 0.5
s397 S397 289 299 0.999 0.5
s398 S398 301 311 0.999 0.5
s399 S399 324 333 0.999 0.5
