https://github.com/morrislab/phylowgs
Tip revision: 2205be16e9ad68426e837229b593f47e36b3547e authored by Jeff Wintersinger on 29 September 2019, 15:37:35 UTC
Make discarding superclones optional.
Make discarding superclones optional.
Tip revision: 2205be1
emptysim.6.70.50.ssm.txt
id gene a d mu_r mu_v
s0 S0 39 58 0.999 0.5
s1 S1 39 73 0.999 0.5
s2 S2 46 75 0.999 0.5
s3 S3 47 70 0.999 0.5
s4 S4 43 68 0.999 0.5
s5 S5 45 72 0.999 0.5
s6 S6 47 73 0.999 0.5
s7 S7 39 65 0.999 0.5
s8 S8 46 70 0.999 0.5
s9 S9 48 71 0.999 0.5
s10 S10 38 62 0.999 0.5
s11 S11 45 70 0.999 0.5
s12 S12 63 87 0.999 0.5
s13 S13 36 61 0.999 0.5
s14 S14 47 87 0.999 0.5
s15 S15 40 73 0.999 0.5
s16 S16 45 70 0.999 0.5
s17 S17 37 75 0.999 0.5
s18 S18 38 67 0.999 0.5
s19 S19 44 65 0.999 0.5
s20 S20 41 69 0.999 0.5
s21 S21 32 55 0.999 0.5
s22 S22 46 68 0.999 0.5
s23 S23 40 64 0.999 0.5
s24 S24 37 59 0.999 0.5
s25 S25 50 81 0.999 0.5
s26 S26 39 63 0.999 0.5
s27 S27 50 79 0.999 0.5
s28 S28 51 77 0.999 0.5
s29 S29 45 78 0.999 0.5
s30 S30 41 65 0.999 0.5
s31 S31 46 61 0.999 0.5
s32 S32 34 58 0.999 0.5
s33 S33 25 54 0.999 0.5
s34 S34 53 88 0.999 0.5
s35 S35 50 68 0.999 0.5
s36 S36 41 76 0.999 0.5
s37 S37 60 91 0.999 0.5
s38 S38 52 78 0.999 0.5
s39 S39 45 64 0.999 0.5
s40 S40 44 74 0.999 0.5
s41 S41 30 69 0.999 0.5
s42 S42 43 77 0.999 0.5
s43 S43 58 82 0.999 0.5
s44 S44 39 69 0.999 0.5
s45 S45 39 57 0.999 0.5
s46 S46 53 77 0.999 0.5
s47 S47 38 66 0.999 0.5
s48 S48 52 67 0.999 0.5
s49 S49 47 70 0.999 0.5
s50 S50 60 73 0.999 0.5
s51 S51 71 87 0.999 0.5
s52 S52 61 80 0.999 0.5
s53 S53 53 61 0.999 0.5
s54 S54 57 77 0.999 0.5
s55 S55 52 65 0.999 0.5
s56 S56 51 71 0.999 0.5
s57 S57 55 71 0.999 0.5
s58 S58 47 62 0.999 0.5
s59 S59 54 69 0.999 0.5
s60 S60 49 64 0.999 0.5
s61 S61 60 71 0.999 0.5
s62 S62 51 64 0.999 0.5
s63 S63 61 83 0.999 0.5
s64 S64 48 69 0.999 0.5
s65 S65 56 75 0.999 0.5
s66 S66 62 78 0.999 0.5
s67 S67 65 74 0.999 0.5
s68 S68 44 62 0.999 0.5
s69 S69 61 76 0.999 0.5
s70 S70 55 72 0.999 0.5
s71 S71 59 69 0.999 0.5
s72 S72 47 65 0.999 0.5
s73 S73 55 77 0.999 0.5
s74 S74 51 67 0.999 0.5
s75 S75 70 86 0.999 0.5
s76 S76 56 66 0.999 0.5
s77 S77 51 59 0.999 0.5
s78 S78 52 68 0.999 0.5
s79 S79 68 82 0.999 0.5
s80 S80 54 74 0.999 0.5
s81 S81 53 68 0.999 0.5
s82 S82 50 69 0.999 0.5
s83 S83 46 64 0.999 0.5
s84 S84 48 64 0.999 0.5
s85 S85 49 67 0.999 0.5
s86 S86 69 87 0.999 0.5
s87 S87 63 81 0.999 0.5
s88 S88 60 75 0.999 0.5
s89 S89 55 69 0.999 0.5
s90 S90 53 61 0.999 0.5
s91 S91 55 67 0.999 0.5
s92 S92 54 78 0.999 0.5
s93 S93 62 74 0.999 0.5
s94 S94 39 52 0.999 0.5
s95 S95 60 85 0.999 0.5
s96 S96 52 71 0.999 0.5
s97 S97 62 70 0.999 0.5
s98 S98 66 77 0.999 0.5
s99 S99 45 57 0.999 0.5
s100 S100 51 59 0.999 0.5
s101 S101 69 78 0.999 0.5
s102 S102 44 57 0.999 0.5
s103 S103 57 70 0.999 0.5
s104 S104 59 73 0.999 0.5
s105 S105 71 81 0.999 0.5
s106 S106 58 60 0.999 0.5
s107 S107 63 78 0.999 0.5
s108 S108 58 70 0.999 0.5
s109 S109 62 69 0.999 0.5
s110 S110 65 73 0.999 0.5
s111 S111 57 65 0.999 0.5
s112 S112 65 75 0.999 0.5
s113 S113 76 85 0.999 0.5
s114 S114 63 75 0.999 0.5
s115 S115 59 73 0.999 0.5
s116 S116 61 74 0.999 0.5
s117 S117 48 59 0.999 0.5
s118 S118 54 60 0.999 0.5
s119 S119 73 82 0.999 0.5
s120 S120 68 83 0.999 0.5
s121 S121 64 73 0.999 0.5
s122 S122 60 63 0.999 0.5
s123 S123 59 70 0.999 0.5
s124 S124 50 63 0.999 0.5
s125 S125 79 90 0.999 0.5
s126 S126 51 65 0.999 0.5
s127 S127 66 79 0.999 0.5
s128 S128 56 68 0.999 0.5
s129 S129 55 66 0.999 0.5
s130 S130 68 81 0.999 0.5
s131 S131 65 77 0.999 0.5
s132 S132 69 80 0.999 0.5
s133 S133 53 56 0.999 0.5
s134 S134 56 63 0.999 0.5
s135 S135 59 69 0.999 0.5
s136 S136 54 62 0.999 0.5
s137 S137 61 72 0.999 0.5
s138 S138 72 87 0.999 0.5
s139 S139 60 73 0.999 0.5
s140 S140 72 78 0.999 0.5
s141 S141 53 65 0.999 0.5
s142 S142 53 62 0.999 0.5
s143 S143 62 70 0.999 0.5
s144 S144 58 65 0.999 0.5
s145 S145 52 58 0.999 0.5
s146 S146 41 51 0.999 0.5
s147 S147 70 78 0.999 0.5
s148 S148 68 74 0.999 0.5
s149 S149 75 80 0.999 0.5
s150 S150 68 77 0.999 0.5
s151 S151 66 69 0.999 0.5
s152 S152 65 68 0.999 0.5
s153 S153 46 49 0.999 0.5
s154 S154 69 76 0.999 0.5
s155 S155 73 79 0.999 0.5
s156 S156 78 78 0.999 0.5
s157 S157 70 75 0.999 0.5
s158 S158 73 79 0.999 0.5
s159 S159 56 64 0.999 0.5
s160 S160 64 67 0.999 0.5
s161 S161 70 72 0.999 0.5
s162 S162 60 64 0.999 0.5
s163 S163 80 84 0.999 0.5
s164 S164 68 73 0.999 0.5
s165 S165 62 63 0.999 0.5
s166 S166 70 75 0.999 0.5
s167 S167 61 63 0.999 0.5
s168 S168 66 71 0.999 0.5
s169 S169 59 63 0.999 0.5
s170 S170 52 57 0.999 0.5
s171 S171 68 69 0.999 0.5
s172 S172 75 81 0.999 0.5
s173 S173 69 72 0.999 0.5
s174 S174 74 77 0.999 0.5
s175 S175 61 66 0.999 0.5
s176 S176 68 73 0.999 0.5
s177 S177 65 69 0.999 0.5
s178 S178 81 84 0.999 0.5
s179 S179 68 72 0.999 0.5
s180 S180 65 70 0.999 0.5
s181 S181 69 77 0.999 0.5
s182 S182 58 63 0.999 0.5
s183 S183 73 76 0.999 0.5
s184 S184 65 70 0.999 0.5
s185 S185 60 65 0.999 0.5
s186 S186 75 78 0.999 0.5
s187 S187 63 68 0.999 0.5
s188 S188 61 65 0.999 0.5
s189 S189 66 72 0.999 0.5
s190 S190 62 67 0.999 0.5
s191 S191 51 54 0.999 0.5
s192 S192 59 65 0.999 0.5
s193 S193 62 73 0.999 0.5
s194 S194 49 57 0.999 0.5
s195 S195 62 72 0.999 0.5
s196 S196 69 74 0.999 0.5
s197 S197 58 60 0.999 0.5
s198 S198 65 67 0.999 0.5
s199 S199 79 84 0.999 0.5
s200 S200 74 76 0.999 0.5
s201 S201 74 76 0.999 0.5
s202 S202 70 70 0.999 0.5
s203 S203 70 72 0.999 0.5
s204 S204 73 75 0.999 0.5
s205 S205 71 71 0.999 0.5
s206 S206 74 74 0.999 0.5
s207 S207 73 73 0.999 0.5
s208 S208 75 76 0.999 0.5
s209 S209 66 68 0.999 0.5
s210 S210 83 88 0.999 0.5
s211 S211 78 79 0.999 0.5
s212 S212 75 76 0.999 0.5
s213 S213 54 55 0.999 0.5
s214 S214 56 57 0.999 0.5
s215 S215 61 62 0.999 0.5
s216 S216 59 59 0.999 0.5
s217 S217 65 65 0.999 0.5
s218 S218 68 73 0.999 0.5
s219 S219 69 72 0.999 0.5
s220 S220 65 68 0.999 0.5
s221 S221 66 67 0.999 0.5
s222 S222 62 64 0.999 0.5
s223 S223 59 59 0.999 0.5
s224 S224 65 66 0.999 0.5
s225 S225 57 58 0.999 0.5
s226 S226 76 77 0.999 0.5
s227 S227 59 62 0.999 0.5
s228 S228 64 64 0.999 0.5
s229 S229 70 73 0.999 0.5
s230 S230 67 68 0.999 0.5
s231 S231 58 58 0.999 0.5
s232 S232 88 90 0.999 0.5
s233 S233 77 78 0.999 0.5
s234 S234 67 68 0.999 0.5
s235 S235 68 69 0.999 0.5
s236 S236 67 70 0.999 0.5
s237 S237 74 76 0.999 0.5
s238 S238 67 71 0.999 0.5
s239 S239 71 71 0.999 0.5
s240 S240 72 72 0.999 0.5
s241 S241 68 69 0.999 0.5
s242 S242 67 73 0.999 0.5
s243 S243 65 67 0.999 0.5
s244 S244 81 83 0.999 0.5
s245 S245 67 67 0.999 0.5
s246 S246 68 71 0.999 0.5
s247 S247 51 54 0.999 0.5
s248 S248 64 64 0.999 0.5
s249 S249 75 77 0.999 0.5
