https://github.com/romerogroup/pyprocar
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Tip revision: a753094d2008adac2b425b4b0d3c40566e91a108 authored by Uthpala Herath on 08 March 2020, 00:06:00 UTC
Added Abinit Parser class
Tip revision: a753094
unfold.rst
Band unfolding
==============

Often times, we need to perform DFT calculations for a supercell geometry rather than the primitive cell. In such cases the band structure becomes quite sophisticated due to the folding of the BZ, and it is difficult to compare the band structure of supercell with that of the primitive cell. The purpose of the band unfolding scheme is to represent the bands within the primitive cell BZ. By calculating the unfolding weight function and plotting the fat bands with the line width proportional to the weight, the unfolded bands can be highlighted. 

Note:
The Brillouin zone of a supercell shrinks respect to the primitive cell. For instance, in a hexagonal primitive lattice the point  H=(1/3, 1/3, 1/2). This point, in a 2x2x2 supercell corresponds to (2/3, 2/3, 1). Therefore, all the distances in the reciprocal space must be doubled (or increased by the respective size of the supercell).


Usage:
First, calculate the band structure in the primitive cell BZ. The PROCAR should be produced with the phase factor included, by setting ``LORBIT=12`` in VASP.

Then the unfold module can be used to plot the unfolded band as follows::

	import numpy as np
	pyprocar.unfold(
                fname='PROCAR',
                poscar='POSCAR',
                outcar='OUTCAR',
                supercell_matrix=np.diag([2, 2, 2]),
                ispin=None, # None for non-spin polarized calculation. For spin polarized case, ispin=1: up, ispin=2: down
                efermi=None,
                shift_efermi=True,
                elimit=(-5, 15),
                kticks=[0, 36, 54, 86, 110, 147, 165, 199],
                knames=['$\Gamma$', 'K', 'M', '$\Gamma$', 'A', 'H', 'L', 'A'],
                print_kpts=False,
                show_band=True,
                width=4,
                color='blue',
                savetab='unfolding.csv',
                savefig='unfolded_band.png',
                exportplt=False)

=========================================
Export plot as a matplotlib.pyplot object
=========================================

PyProcar allows the plot to be exported as a matplotlib.pyplot object. This allows for further processing of the plot through options available in matplotlib.
This can be enabled by setting ``exportplt = True``.
Usage::

	import matplotlib.pyplot as plt
	import pyprocar

	plt = pyprocar.unfold('PROCAR', outcar='OUTCAR', exportplt=True)  
	plt.title('Using matplotlib options')
	plt.show()	        

.. automodule:: pyprocar.scriptUnfold
	:members:
	:undoc-members:
	:inherited-members:
	:show-inheritance:
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