https://gitlab.opengeosys.org/ogs/ogs.git
Tip revision: 555ba276a0c4ccf142e365b7ab12a1498cf2a82f authored by Lars Bilke on 19 December 2016, 09:55:52 UTC
Use Jenkins pipeline library 1.0.0
Use Jenkins pipeline library 1.0.0
Tip revision: 555ba27
NodePartitionedMesh.h
/*!
\file NodePartitionedMesh.h
\author Wenqing Wang
\date 2014.06
\brief Definition of mesh class for partitioned mesh (by node) for parallel computing within the
framework of domain decomposition (DDC).
\copyright
Copyright (c) 2012-2016, OpenGeoSys Community (http://www.opengeosys.org)
Distributed under a Modified BSD License.
See accompanying file LICENSE.txt or
http://www.opengeosys.org/project/license
*/
#ifndef NODE_PARTITIONED_MESH_H_
#define NODE_PARTITIONED_MESH_H_
#include <algorithm>
#include <string>
#include <vector>
#include "Mesh.h"
#include "Node.h"
namespace MeshLib
{
/// A subdomain mesh.
class NodePartitionedMesh : public Mesh
{
public:
// Copy a global mesh for the case of the thread number is one,
// i.e the gobal mesh is not partitioned.
// \param mesh The gobal mesh
explicit NodePartitionedMesh(const Mesh& mesh)
: Mesh(mesh), _global_node_ids(mesh.getNumberOfNodes()),
_n_global_base_nodes(mesh.getNumberOfBaseNodes()),
_n_global_nodes(mesh.getNumberOfNodes()),
_n_active_base_nodes(mesh.getNumberOfBaseNodes()),
_n_active_nodes(mesh.getNumberOfNodes())
{
const auto& mesh_nodes = mesh.getNodes();
for (std::size_t i = 0; i < _nodes.size(); i++)
{
_global_node_ids[i] = _nodes[i]->getID();
// TODO To add copying of the connected nodes (and elements)
// in the copy constructor of class Node in order to
// drop the following lines.
auto node = _nodes[i];
// Copy constructor of Mesh does not copy the connected
// nodes to node.
if (node->_connected_nodes.size() == 0)
{
std::copy(mesh_nodes[i]->_connected_nodes.begin(),
mesh_nodes[i]->_connected_nodes.end(),
std::back_inserter(node->_connected_nodes));
}
}
}
/*!
\brief Constructor
\param name Name assigned to the mesh.
\param nodes Vector for nodes, which storage looks like:
||--active base nodes--|--ghost base nodes--|
--active extra nodes--|--ghost extra nodes--||
(extra nodes: nodes for high order interpolations)
\param glb_node_ids Global IDs of nodes of a partition.
\param elements Vector for elements. Ghost elements are stored
after regular (non-ghost) elements.
\param properties Mesh property.
\param n_global_base_nodes Number of the base nodes of the global mesh.
\param n_global_nodes Number of all nodes of the global mesh.
\param n_base_nodes Number of the base nodes.
\param n_active_base_nodes Number of the active base nodes.
\param n_active_nodes Number of all active nodes.
*/
NodePartitionedMesh(const std::string &name,
const std::vector<Node*> &nodes,
const std::vector<std::size_t> &glb_node_ids,
const std::vector<Element*> &elements,
Properties properties,
const std::size_t n_global_base_nodes,
const std::size_t n_global_nodes,
const std::size_t n_base_nodes,
const std::size_t n_active_base_nodes,
const std::size_t n_active_nodes)
: Mesh(name, nodes, elements, properties, n_base_nodes),
_global_node_ids(glb_node_ids),
_n_global_base_nodes(n_global_base_nodes),
_n_global_nodes(n_global_nodes),
_n_active_base_nodes(n_active_base_nodes),
_n_active_nodes(n_active_nodes)
{
}
/// Get the number of nodes of the global mesh for linear elements.
std::size_t getNumberOfGlobalBaseNodes() const
{
return _n_global_base_nodes;
}
/// Get the number of all nodes of the global mesh.
std::size_t getNumberOfGlobalNodes() const
{
return _n_global_nodes;
}
/// Get the global node ID of a node with its local ID.
std::size_t getGlobalNodeID(const std::size_t node_id) const
{
return _global_node_ids[node_id];
}
/// Get the number of the active nodes of the partition for linear elements.
std::size_t getNumberOfActiveBaseNodes() const
{
return _n_active_base_nodes;
}
/// Get the number of all active nodes of the partition.
std::size_t getNumberOfActiveNodes() const
{
return _n_active_nodes;
}
/// Check whether a node with ID of node_id is a ghost node
bool isGhostNode(const std::size_t node_id) const
{
if(node_id < _n_active_base_nodes)
return false;
else if(node_id >= _n_base_nodes && node_id < getLargestActiveNodeID() )
return false;
else
return true;
}
/// Get the largest ID of active nodes for higher order elements in a partition.
std::size_t getLargestActiveNodeID() const
{
return _n_base_nodes + _n_active_nodes - _n_active_base_nodes;
}
// TODO I guess that is a simplified version of computeSparsityPattern()
/// Get the maximum number of connected nodes to node.
std::size_t getMaximumNConnectedNodesToNode() const
{
std::vector<Node *>::const_iterator it_max_ncn = std::max_element(
_nodes.cbegin(), _nodes.cend(),
[](Node const *const node_a, Node const *const node_b)
{
return (node_a->getConnectedNodes().size() <
node_b->getConnectedNodes().size());
});
// Return the number of connected nodes +1 for the node itself.
return (*it_max_ncn)->getConnectedNodes().size() + 1;
}
private:
/// Global IDs of nodes of a partition
std::vector<std::size_t> _global_node_ids;
/// Number of the nodes of the global mesh linear interpolations.
std::size_t _n_global_base_nodes;
/// Number of all nodes of the global mesh.
std::size_t _n_global_nodes;
/// Number of the active nodes for linear interpolations
std::size_t _n_active_base_nodes;
/// Number of the all active nodes.
std::size_t _n_active_nodes;
};
} // namespace MeshLib
#endif // NODE_PARTITIONED_MESH_H_