https://github.com/JIC-Image-Analysis/cells-from-leaves
Tip revision: e182fa24db23211c1fb238c8088d4c68ed9dd904 authored by Tjelvar Olsson on 10 January 2018, 23:14:56 UTC
Update readme
Update readme
Tip revision: e182fa2
run_docker_container_with_jic_testing_paths.sh
#!/bin/bash
CONTAINER="cells-from-leaves"
INPUT_DIR="/usr/users/JIC_a5/olssont/group_data/scicomp/incoming/mansfiec/2017-05-18-analysis-begins/data"
touch `pwd`/bash_history
docker run -it --rm -v `pwd`/bash_history:/root/.bash_history -v $INPUT_DIR:/data:ro -v `pwd`/parameters:/parameters:ro -v `pwd`/scripts:/scripts:ro -v `pwd`/output:/output $CONTAINER
