https://github.com/bigdelys/pre_ICA_cleaning
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Tip revision: 7dcb056c36d2c6d0881f5fa6163dd4d5a066d854 authored by Nima Bigdely-Shamlo on 01 August 2017, 19:48:08 UTC
after LARg pipeline
Tip revision: 7dcb056
filtfilt_fast.m
function X = filtfilt_fast(varargin)
% Like filtfilt(), but faster when filter and signal are long (and A=1).
% Y = filtfilt_fast(B,A,X)
%
% Uses FFT convolution (needs fftfilt). The function is faster than filter when approx.
% length(B)>256 and size(X,Dim)>1024, otherwise slower (due size-testing overhead).
%
% Note:
%  Can also be called with four arguments, as Y = filtfilt_fast(N,F,A,X), in which case an Nth order
%  FIR filter is designed that has the desired frequency response A at normalized frequencies F; F
%  must be a vector of numbers increasing from 0 to 1.
%
% See also: 
%   filtfilt, filter
% 
%                           Christian Kothe, Swartz Center for Computational Neuroscience, UCSD
%                           2010-07-14

% Copyright (C) Christian Kothe, SCCN, 2010, ckothe@ucsd.edu
%
% This program is free software; you can redistribute it and/or modify it under the terms of the GNU
% General Public License as published by the Free Software Foundation; either version 2 of the
% License, or (at your option) any later version.
%
% This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without
% even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
% General Public License for more details.
%
% You should have received a copy of the GNU General Public License along with this program; if not,
% write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307
% USA

if nargin == 3
    [B A X] = deal(varargin{:});
elseif nargin == 4
    [N F M X] = deal(varargin{:});
    B = design_fir(N,F,sqrt(M)); A = 1; % note: we use the sqrt() because we run forward and backward
else
    help filtfilt_fast;
    return;
end

if A == 1
    was_single = strcmp(class(X),'single');
    w = length(B); t = size(X,1);    
    % extrapolate
    X = double([bsxfun(@minus,2*X(1,:),X(1+mod(((w+1):-1:2)-1,t),:)); X; bsxfun(@minus,2*X(t,:),X(1+mod(((t-1):-1:(t-w))-1,t),:))]);
    % filter, reverse
    X = filter_fast(B,A,X); X = X(length(X):-1:1,:);
    % filter, reverse
    X = filter_fast(B,A,X); X = X(length(X):-1:1,:);
    % remove extrapolated pieces
    X([1:w t+w+(1:w)],:) = [];
    if was_single
        X = single(X); end    
else    
    % fall back to filtfilt for the IIR case
    X = filtfilt(B,A,X);
end
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