git s# explicit dirs #
###################
*doc/html/
*pipeline_draft/analysis_root/
*.swp
*.swo

# autosave #
###################
*~
*asv

# Minimalistic example related files #
###################
*example-project

# misc #
###################
*jkor_test
*ctap/doc/html
*tmp

# OS generated files #
######################
.DS_Store
.DS_Store?
._*
.Spotlight-V100
.Trashes
ehthumbs.db
Thumbs.db
dependencies/export_fig/*
update_matlab_path_ctap_jkor.m


# paramsweep output
/ctap/templates/paramsweep_example/syndata
/ctap/templates/paramsweep_example/batch_psweep_datagen

/ctap/templates/paramsweep_example/ctap_hydra_badchan
/ctap/templates/paramsweep_example/ctap_hydra_badseg
/ctap/templates/paramsweep_example/ctap_hydra_blink

/ctap/templates/paramsweep_example/logs

/ctap/templates/paramsweep_example/sweepres_segments
/ctap/templates/paramsweep_example/sweepres_channels
/ctap/templates/paramsweep_example/sweepres_blinks

sccn-clean-20min/

untitled.m


/ctap/templates/HYDRA_branching_example/ctap_hydra_badseg/
/ctap/templates/HYDRA_branching_example/ctap_synthetic_pre/
/ctap/templates/HYDRA_branching_example/hydra_pipe_test_test/
/ctap/templates/HYDRA_branching_example/syndata/
/ctap/templates/HYDRA_branching_example/data/
/ctap/templates/Copy_of_HYDRA_branching_example/cleanSCCNdataHYDRA.m
/ctap/templates/Copy_of_HYDRA_branching_example/ctap_synthetic_pre/
/ctap/templates/Copy_of_HYDRA_branching_example/ctap_synthetic_pre_badseg/
/ctap/templates/Copy_of_HYDRA_branching_example/data/
/ctap/templates/Copy_of_HYDRA_branching_example/hydra_pipe_test_test/
/ctap/templates/Copy_of_HYDRA_branching_example/sweepres_channels/
/ctap/templates/Copy_of_HYDRA_branching_example/sweepres_segments/
/ctap/templates/Copy_of_HYDRA_branching_example/syndata/


looplog.txt

.Rproj.user
.RData
.Rhistory