useDynLib( BDgraph, .registration = TRUE )

importFrom( "stats", "dnorm" )

export( bdgraph,
		bdgraph.mpl,
		bdgraph.dw,
		bdw.reg,

		transfer,
		plinks,
		bf,
		precision,
		covariance,
		select,
		pgraph,
		graph.sim,
		adj2link,
		link2adj,
		sparsity,
		bdgraph.sim,
		bdgraph.npn,
		compare,

		plotcoda,
		traceplot,
		plotroc,
		roc,
		auc,
		conf.mat,
		conf.mat.plot,
		
		rgwish,
		rwish,
		gnorm,
		rmvnorm,
		
		ddweibull,
		pdweibull,
		qdweibull,
		rdweibull,
		
		summary.bdgraph,
		plot.bdgraph, 
		print.bdgraph, 
		predict.bdgraph,
		
		posterior.predict,

		plot.graph, 

		plot.sim,
		print.sim, 
		
		detect_cores,
		get_graph,
		get_g_prior,
		get_g_start,
		get_K_start,
		get_S_n_p,
		get_cores,
		
		get_bounds_dw,
		ddweibull_reg,
		log_post_cond_dw,
		near_positive_definite,
		
		get_Ds_tgm_R,
		get_Ts_R,
		update_tu_R,
		update_mu_R
	   )

S3method( "summary", "bdgraph" )
S3method( "plot"   , "bdgraph" )
S3method( "print"  , "bdgraph" )
S3method( "predict", "bdgraph" )

S3method( "plot" , "sim" )
S3method( "print", "sim" )

S3method( "plot", "graph" )