https://github.com/cran/IDPmisc
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Tip revision: f5c0af4bb057bde4d584a4ae0cf32bfd5c76df60 authored by Christoph Hofer on 08 February 2024, 23:50:10 UTC
version 1.1.21
Tip revision: f5c0af4
ChangeLog
2005-02-16 Rene Locher
 	IDPmisc V0.2.3

2005-03-22 Rene Locher
	IDPmisc V0.3.1
	* inf.omit, ok added

2005-04-20  Rene Locher
	IDPmisc V0.3.2
	* inf.omit deprecated
	* inf.omit renamed to the more precise name NaRV.omit.
	  NaRV = Not A Regular Value
	* ipairs, iplot, image: densities are now displayed centered over
	  the corresponding factor levels

2005-04-21 Rene Locher
	IDPmisc V0.3.3
	* ipairs: factor levels are now correctely labeled
	* Image, ipairs, ilagplot: argument 'ztrans' renamed to ztransf


2005-04-27 Rene Locher
	IDPmisc V0.3.4
	* iplot: factor levels are now correctely labeled

2005-06-03 Rene Locher
	IDPmisc V0.3.5
	* zoom: example in help and text output of zoom are improved

2005-07-22 Rene Locher
	IDPmisc V0.3.6
	* zoom: example in help further improved
	* ixyplot: limits for nonfactors minimized

2005-10-05 Rene Locher
	IDPmisc V0.4.1 not published

2005-10-05 Rene Locher
	IDPmisc V0.4.2
	* ipairs, ilagplot: additional examples on dataset AirQual{SwissAir}
	* Image, ipairs, ilagplot, ixyplot: additional argument
	  'ztransf', which allows transformation of counts by a user
	  defined function.

2005-11-15 Rene Locher
	Quick fix for CRAN because version 0.5 is not yet ready to be
	  published
	* Arrows: 'atan(y,x)' replaced by 'atan2(y,x)'

2005-10-12 Rene Locher
	IDPmisc V0.5.0, not published
	* draw.leg: new function
	* rose-class: new class
	* rose: new function
	* plot: new S4-Method for class rose
	* RhoPhi2xy: new function
	* xy2RhoPhi: new function

2005-10-12 Rene Locher
	IDPmisc V0.5.1, not published
	* plot: S4-Method, argument 'del.vp' removed

2005-10-17 Rene Locher
	IDPmisc V0.5.2, not published
	* plot: S4-Method, help to argument 'stacked' and
	  corresponding error message in code updated.
	  Interpretation of argument 'rev.col' changed, so that stacked
	  and unstacked roses have now the same order in the legend.
	* rose: new argument 'right'
	  'na.warning=TRUE': warns now also for x values out of breaks
	  range

2005-10-18 Rene Locher
	IDPmisc V0.5.3, not published
	* plot: S4-Method
	  Several new warnings added.
	  Argument 'trans' added, help revised
	* rose: argument 'na.warning' changed to 'warn'

2005-10-18 Rene Locher
	IDPmisc V0.5.4, not published
	  several improvements on help pages
	* RhoPhi2xy changed to 'clock2cart'
	* xy2RhoPhi changed to 'cart2clock'
	* plot.rose completely revised, including argument list and
	            help pages

2005-12-06 Rene Locher
	IDPmisc V0.5.5
	* plot.rose: several bugs fixed

2005-12-16 Rene Locher
	IDPmisc V0.5.6
	* plot.rose works now correctly with ray.lim set manually
	  in grid.control
	* general.control: arguments reordered and new arguments for
	  manual setting of rose dimensions. Help expanded and corrected.
	* grid.control: default values for argument 'cyclVar.lab'
	  corrected. 'SW' replaced by 'SE'

2005-12-19 Rene Locher
	IDPmisc V0.5.7
	* general.control: Help expanded
	* IDPmisc.package: Help expanded

2005-12-22 Rene Locher
	IDPmisc V0.5.8
	* plot.rose: Bug for roses with negative values in slot rho
	  eliminated

2006-01-19 Rene Locher
	IDPmisc V0.5.9
	* general.control for plot.rose with new argument 'shift'

2006-06-20 Rene Locher
	IDPmisc V0.6.0, not published
	* clock2cart, cart2clock: processing of arguments changed
	  to make input more flexible
	* Arrows default settings of arguments 'h.lwd' and 'h.lty' changed
	* getXY: new function to read in data with 1 or 2 dimension
	* peaks: new function to evaluate peaks in data without
	  smoothing them first
	* MS: New dataset included: SELDI TOF MS of sheep blood

2006-07-03 Rene Locher
	IDPmisc V0.6.1
	* getXY, peaks, MS: Improvement of help,
	  change of some argument names for better understanding


2006-07-12 Rene Locher
	IDPmisc V0.6.2
	* peaks: Improvement of help

2006-07-14 Rene Locher
        IDPmisc V0.7.0, not published
	* longts.plot New function for plotting very long time series

2006-07-24 Rene Locher
        IDPmisc V0.7.1
	* longts.plot Help improved, some names of arguments changed

2006-07-25 Rene Locher
        IDPmisc V0.7.2
	* longts.plot Default of arguments 'y1lim' and 'y2lim' changed
	to 'range(y1,na.rm=T,finite=TRUE)'.

2006-07-25 Rene Locher
        IDPmisc V0.7.3
	* draw.leg code adapted to new grid version

2006-07-26 Rene Locher
        IDPmisc V0.7.4
	* longts.plot Argument names changed changed back to old version
	  in V0.7.2 because these are more consistent to arguments in
	  par(). Sorry for this inconvenience!
	  Bug for color in axis removed.

2006-07-27 Rene Locher
        IDPmisc V0.7.5
	* peaks In rare cases peak width was undefined.

2006-11-08 Rene Locher
        IDPmisc V0.8.0
	* rfbaseline New function for baseline subtraction
	* rfbaselineScale New function

2007-02-07 Rene Locher
        IDPmisc V0.9.0, not published
	* itermplot New function for termplots with very large numbers
	  of observations
	* ipanel.smooth New panelfunction for itermplot
	* help Typing errors corrected

2007-02-19 Rene Locher
	IDPmisc V0.9.1
	* longts.plot
	  New arguments 'cex.axis', 'mar', 'filename', 'extension',
	  'filetype'.
	  Spacing between individual figures has been optimized.
	  Automatic constructed and manually defined titles
	  are now positioned identically.
          Default value of 'mgp' changed from c(1.7,0.7,0) to
	  c(2,0.7,0)
	* rose-class Help updated, so that it is found now in the
	  subject index by rose-class

2007-02-19 Rene Locher
	IDPmisc V0.9.2
	* IDPcolorRamp
	  Makes now sure that argument 'n' is an integer so that no
	  warning is issued any more.
	* Image
	  Makes now sure that the returned maximum counts is an integer
	  for any function in argument 'ztransf'.
	* Arrows
	  When some elements of (x1,y1,x2,y2) result in an undefined
	  direction, an warning is issued and the corresponding
	  arrow is not drawn.
	* draw.leg
	  updated to new version of grid graphics

2007-08-14 Rene Locher
	IDPmisc V0.9.3
	* iterm New argument 'scale'.

2007-10-02 Rene Locher
	IDPmisc V0.9.4
	* DESCRPTION: 'SaveImage: TRUE' removed,
	  Authors E-mail address changed
          License standardized
	* RD-Files: non-ASCII values from help pages removed.
	* plot.rose new argument 'warn' added
	* title.control default for argument 'cex' 1.5 (before 1.7)
	* longts.plot default for argument 'cex.leg' par("cex")
	              (before 1.5)
	. example adapted to SwissAir(>= 1.08)

2007-10-03 Rene Locher
	IDPmisc V0.9.5
	* DESCRIPTION: 'Encoding: latin1' added

2008-07-08 Rene Locher
	IDPmisc V0.9.6
	* plot.longts replaces function 'longts.plot' with
	  new argument 'xpd' to define whether data points are
	  clipped to plot region (=FALSE) or not (=TRUE). Horizontal
	  lines will be always clipped.
	  Arguments 'automain' and 'main' can now be combined.
	  New defaults for 'upf', 'fpp', 'overlap', 'col.y2', 'lwd2', 'mar'.
	  New arguments for defining labeling and tick marking axes.
	  Beware: Definition of x-axis has completely changed and is now
	  closer to standard approach.
	  Restores parameters of par() which were in use before call of
	  function.

	* longts.plot deprecated
	* ixyplot deprecated and replaced by iplot. Reason: ixyplot()
	  produces classical graphics contrary to xyplot().
	* showColors
	  Restores parameters of par() which were in use before call
	  function.
	* poster.plot
	  Restores parameters of par() which were in use before call
	  function.
	* Image: New argument 'matrix'. Zmax is not rounded any more.

2008-07-08 Rene Locher
	IDPmisc V0.9.7
	* longts.plot: examples in help removed
	* ixyplot: examples in help removed
	* Image: example with ixyplot replaced by iplot

2008-07-08 Rene Locher
	IDPmisc V0.9.8
	* longtsPlot: Restores parameters of par() which were in use
	before call function.

2008-07-21 Rene Locher
	IDPmisc V0.9.9
	Typos in help removed

2009-03-13 Rene Locher
	IDPmisc V1.0.00
	* inf.omit: removed. Was replaced by NaRV.omit() .
	* longts.plot: help reduced and function defuncted. Use longtsPlot
	  instead.
	* rd-files: Adaption to new rules for R 2.9.x, examples added
	  and \ or improved.
	* ixyplot: Help reduced and function defuncted. Use iplot()
	  instead.
	* IDPcolorRamp: Help extended.
	* Image: matrix=TRUE delivered 'zmax' instead of matrix. This
	  resulted also in wrong behaviour for ilagplot() and ipairs()
	  for zmax=fixed value.
	  Comments on package 'fields' removed.
	* ilagplot: Argument 'zmax' did not work correctly.
	  Position of title optimized.
	  New arguments 'cex.axis', 'd.main', 'legend', 'd.legend',
	  'mar', 'oma'.
	  Defaults for cex.main changed.
	  Help slightly improved.
	* ipairs: Argument 'zmax' did not work correctly.
	  Axes were not clipped to the plot region.
	  Arguments 'labels', 'cex.lab', 'nlab', 'minL.lab' are now
	  called 'lab.diag', 'cex.lag', 'nlab.axis', 'minL.axis'.
          New arguments 'cex.axis', 'd.main', 'legend', 'd.legend',
	  'mar', 'oma'.
	  Defaults for cex.diag and cex.main changed.
 	  Argument 'verbose' removed.
	  Compacter figure. By default no margins around individual
	  scatter plots.
	  Examples in help slightly improved.
	* iplotLegend: New function to plot legends of color ramp.
	* iplot: Plotting Legend first, to allow further additions
	  to plot.
	  'nx.lab', 'ny.lab', 'minL.lab' renamed to 'nlab.xaxis',
	  'nlab.yaxis', 'minL.axis'.
	  New arguments 'd.main', 'legend', 'd.legend', 'cex.axis',
	  'las', 'oma', '...'
	* longtsPlot: Axes have sometimes not been clipped to the plot
	region. Help improved.
	* MS: Help improved.
	* peak: Help improved.
	* poster.plot: Help improved.
	* showColors: New argument 'mar'.
	  After exiting showColors, original arguments of par() are
	  restored.
2009-03-16 Rene Locher
	IDPmisc V1.0.01
	* plot.rose Shows warning only when warn = TRUE
	* Help: Typos corrected, text improved.
2009-03-26 Rene Locher
	IDPmisc V1.1.00
	* plotdat devided into plotdat and griddat
	* plot.rose: New feature:
	  Rose can now be plotted in segments (which is now default).
	  Help slightly changed.
	* general.control: New argument 'type'. Cf. 'plot.rose'.
	* draw.leg: if (any(textLocations)) replaced by
	  if (length(textLocations))
	* ilagplot: Default distances and character sizes optimized.
	  New arguments 'cex','mgp','tcl'.
	* ipairs: Default distances and character sizes optimized.
	  New arguments 'cex','mgp','tcl'.
	* iplot: Default distances and character sizes optimized.
	  New arguments 'cex','mgp','tcl'.
2009-08-03 Rene Locher
	IDPmisc V1.1.01
	* non-english letters removed from sources and help files for
	  compatibility
	* Description: Encoding: latin1 removed
	* Partially matching arguments altered to
	  fully matching arguments
2009-08-03 Rene Locher
	IDPmisc V1.1.02
	* Error in help file corrected
	* Partially matching arguments altered to
	  fully matching arguments
2009-08-04 Rene Locher
	IDPmisc V1.1.03
	* File drawleg.R, which was needless, removed.
	* Partially matching arguments altered to
	  fully matching arguments

2009-10-05 Rene Locher
	IDPmisc V1.1.04
	* date of changes corrected since V1.0.00
	* longts.plot.rd removed
	* longtsPlot: A change made in V0.9.6 was revoked.
  	  Parameters of par() before call of function are no
	  longer stored. Reason: Easier plotting of individual legend in
	  the last figure of the page.
	* rose.grob: gpar(fill="transparent") set in all grobs. This was
	  necessary for plotting correctly on png devices!?

2009-10-06 Rene Locher
	IDPmisc V1.1.05
	* longtsPlot: When filename is defined longtsPlot() does not
	  ask any more wether it should continue to print the next
	  page. Wrong link corrected in longtsPlot.Rd

2009-10-27 Rene Locher
	IDPmisc V1.1.06
	* IDPcolorRamp.Rd: No longer available link removed.
	* Image.Rd: No longer available link removed.
	* showColors.Rd: No longer available link removed.

2010-10-15 Rene Locher
	IDPmisc V1.1.07
	* peaks.RD: link to outdated ppc-package removed
	* plot.rose: rose can be plotted as stacked also when cut
	  argument is null. Default colors for unstacked optimized.
	* rose.grob: Width of border can be chosen for stacked plots.

2010-10-15 Rene Locher
	IDPmisc V1.1.08
	* rose: When warn = FALSE, observations with cyclVar==NA
	  were not eliminated.

2010-12-02 Rene Locher
	IDPmisc V1.1.09
	* useDynLib(IDPmisc) in NAMESPACE outcommented as it is not used
	* ixyplot removed as defuncted since V1.0.00
	* longts.plot removed as defuncted since V1.0.00

2010-12-02 Rene Locher
	IDPmisc V1.1.10
	Unnecessary file removed in src directory.

2011-09-21 Rene Locher
	IDPmisc V1.1.11
	* showColors: help improved.
	* longtsPlot:  on.exit(options(warn=options("warn"), add=TRUE),
	  was on.exit(warn=0, add=TRUE).
	  Argument 'type' removed.
	  New arguments 'type1', 'type2', 'pch1', 'pch2', 'cex1', 'cex2'.
	  Help text modified.
	* plot.page.R
	  New arguments 'type1', 'type2', 'pch1', 'pch2', 'cex1', 'cex2'.

2011-09-28 Rene Locher
	IDPmisc V1.1.12
	* longtsPlot: Arguments 'cex1', 'cex2' renamed to
	  'pt.cex1', 'pt.cex2'
	  Data.frame for y2 did not work.
	* plot.page: Arguments 'cex1', 'cex2' renamed to
	  'pt.cex1', 'pt.cex2'
	  'pt.cex1' and 'pt.cex2' now only used for size of symbols!
	  Legend plot adapted to different 'pt.cex1' and 'pt.cex2'
	  Lines arguments corrected.

2011-10-09 Rene Locher
	IDPmisc V1.1.13
	* longtsPlot: Arguments 'pt.cex1', 'pt.cex2' renamed to
	  'cex.pt1', 'cex.pt2' for consistency reasons.
	  New argument 'las'.
	* plot.page Arguments 'pt.cex1', 'pt.cex2' renamed to
	  'cex.pt1', 'cex.pt2' for consistency reasons.
	  New argument 'las'. Unused argument 'y2.lab' removed.
	  Minor corrections when drawing axes.

2011-10-10 Rene Locher
	IDPmisc V1.1.14
	* longtsPlot: Default of argument 'las' set to 0.

2011-11-08 Rene Locher
	IDPmisc V1.1.15
	* cart2clock, clock2cart: details section added.
	* cart2clock: comment in examples improved.
	  Error when argument y=0 corrected.

2011-11-09 Rene Locher
	IDPmisc V1.1.16
	* MS: size of data reduced to about half by better compression

2012-11-01 Rene Locher
	IDPmisc V1.1.17
	* plotdat: Partial argument match removed

2018-10-02 Rene Locher
	IDPmisc V1.1.18
	* Package: Datasets in help examples downsized to reduce execution time for
	testing package. Functions are now imported individually in
	namespace. New link to our institute. C function are now
	registered and dynamic symbols are used.
	* lwreg: S.h replaced by R.h and code adapted correspondingly.
	* iplot: Resetting par to previous settings.
	* rfbaseline: .C calls adapted to registered C function

2019-02-11 Rene Locher
	IDPmisc V1.1.19
	* New functions for converting humidity measures added

2020-01-21 Rene Locher
	IDPmisc V1.1.2o
	* showColors: Link to DAAG package removed

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