https://github.com/cyinbox/NGS
Tip revision: b70248926b64ff3fc81d4fa33725770ed0ded596 authored by Changchuan Yin on 22 November 2018, 21:22:57 UTC
Whole genome SNP genotyping sample vcf data
Whole genome SNP genotyping sample vcf data
Tip revision: b702489
SRR5714648.vcf
##fileformat=VCFv4.2
##FILTER=<ID=LowQual,Description="Low quality">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth (reads with MQ=255 or with bad mates are filtered)">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Normalized, Phred-scaled likelihoods for genotypes as defined in the VCF specification">
##GATKCommandLine.UnifiedGenotyper=<ID=UnifiedGenotyper,Version=3.8-0-ge9d806836,Date="Tue Jul 24 11:04:23 CDT 2018",Epoch=1532448263921,CommandLineOptions="analysis_type=UnifiedGenotyper input_file=[genome_sortedG.bam] showFullBamList=false read_buffer_size=null read_filter=[] disable_read_filter=[] intervals=null excludeIntervals=null interval_set_rule=UNION interval_merging=ALL interval_padding=0 reference_sequence=NC_007795.fasta nonDeterministicRandomSeed=false disableDithering=false maxRuntime=-1 maxRuntimeUnits=MINUTES downsampling_type=BY_SAMPLE downsample_to_fraction=null downsample_to_coverage=250 baq=OFF baqGapOpenPenalty=40.0 refactor_NDN_cigar_string=false fix_misencoded_quality_scores=false allow_potentially_misencoded_quality_scores=false useOriginalQualities=false defaultBaseQualities=-1 performanceLog=null BQSR=null quantize_quals=0 static_quantized_quals=null round_down_quantized=false disable_indel_quals=false emit_original_quals=false preserve_qscores_less_than=6 globalQScorePrior=-1.0 secondsBetweenProgressUpdates=10 validation_strictness=SILENT remove_program_records=false keep_program_records=false sample_rename_mapping_file=null unsafe=null use_jdk_deflater=false use_jdk_inflater=false disable_auto_index_creation_and_locking_when_reading_rods=false no_cmdline_in_header=false sites_only=false never_trim_vcf_format_field=false bcf=false bam_compression=null simplifyBAM=false disable_bam_indexing=false generate_md5=false num_threads=1 num_cpu_threads_per_data_thread=1 num_io_threads=0 monitorThreadEfficiency=false num_bam_file_handles=null read_group_black_list=null pedigree=[] pedigreeString=[] pedigreeValidationType=STRICT allow_intervals_with_unindexed_bam=false generateShadowBCF=false variant_index_type=DYNAMIC_SEEK variant_index_parameter=-1 reference_window_stop=0 phone_home= gatk_key=null tag=NA logging_level=INFO log_to_file=null help=false version=false genotype_likelihoods_model=SNP pcr_error_rate=1.0E-4 computeSLOD=false pair_hmm_implementation=LOGLESS_CACHING min_base_quality_score=17 max_deletion_fraction=0.05 min_indel_count_for_genotyping=5 min_indel_fraction_per_sample=0.25 indelGapContinuationPenalty=10 indelGapOpenPenalty=45 indelHaplotypeSize=80 indelDebug=false ignoreSNPAlleles=false allReadsSP=false ignoreLaneInfo=false reference_sample_calls=(RodBinding name= source=UNBOUND) reference_sample_name=null min_quality_score=1 max_quality_score=40 site_quality_prior=20 min_power_threshold_for_calling=0.95 annotateNDA=false useNewAFCalculator=false heterozygosity=0.001 indel_heterozygosity=1.25E-4 heterozygosity_stdev=0.01 standard_min_confidence_threshold_for_calling=10.0 standard_min_confidence_threshold_for_emitting=30.0 max_alternate_alleles=6 max_genotype_count=1024 max_num_PL_values=100 input_prior=[] sample_ploidy=2 genotyping_mode=DISCOVERY alleles=(RodBinding name= source=UNBOUND) contamination_fraction_to_filter=0.0 contamination_fraction_per_sample_file=null p_nonref_model=null exactcallslog=null output_mode=EMIT_VARIANTS_ONLY allSitePLs=false dbsnp=(RodBinding name= source=UNBOUND) comp=[] out=D:\UIC\genome.vcf onlyEmitSamples=[] debug_file=null metrics_file=null annotation=[] excludeAnnotation=[] filter_reads_with_N_cigar=false filter_mismatching_base_and_quals=true filter_bases_not_stored=false">
##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
##INFO=<ID=BaseQRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt Vs. Ref base qualities">
##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth; some reads may have been filtered">
##INFO=<ID=DS,Number=0,Type=Flag,Description="Were any of the samples downsampled?">
##INFO=<ID=Dels,Number=1,Type=Float,Description="Fraction of Reads Containing Spanning Deletions">
##INFO=<ID=ExcessHet,Number=1,Type=Float,Description="Phred-scaled p-value for exact test of excess heterozygosity">
##INFO=<ID=FS,Number=1,Type=Float,Description="Phred-scaled p-value using Fisher's exact test to detect strand bias">
##INFO=<ID=HaplotypeScore,Number=1,Type=Float,Description="Consistency of the site with at most two segregating haplotypes">
##INFO=<ID=InbreedingCoeff,Number=1,Type=Float,Description="Inbreeding coefficient as estimated from the genotype likelihoods per-sample when compared against the Hardy-Weinberg expectation">
##INFO=<ID=MLEAC,Number=A,Type=Integer,Description="Maximum likelihood expectation (MLE) for the allele counts (not necessarily the same as the AC), for each ALT allele, in the same order as listed">
##INFO=<ID=MLEAF,Number=A,Type=Float,Description="Maximum likelihood expectation (MLE) for the allele frequency (not necessarily the same as the AF), for each ALT allele, in the same order as listed">
##INFO=<ID=MQ,Number=1,Type=Float,Description="RMS Mapping Quality">
##INFO=<ID=MQ0,Number=1,Type=Integer,Description="Total Mapping Quality Zero Reads">
##INFO=<ID=MQRankSum,Number=1,Type=Float,Description="Z-score From Wilcoxon rank sum test of Alt vs. Ref read mapping qualities">
##INFO=<ID=QD,Number=1,Type=Float,Description="Variant Confidence/Quality by Depth">
##INFO=<ID=RPA,Number=.,Type=Integer,Description="Number of times tandem repeat unit is repeated, for each allele (including reference)">
##INFO=<ID=RU,Number=1,Type=String,Description="Tandem repeat unit (bases)">
##INFO=<ID=ReadPosRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt vs. Ref read position bias">
##INFO=<ID=SOR,Number=1,Type=Float,Description="Symmetric Odds Ratio of 2x2 contingency table to detect strand bias">
##INFO=<ID=STR,Number=0,Type=Flag,Description="Variant is a short tandem repeat">
##contig=<ID=CP000253.1,length=2821361>
##reference=file://D:\UIC\NC_007795.fasta
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT 19
CP000253.1 89 . C T 364.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:393,27,0
CP000253.1 93 . C T 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 137 . A G 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 165 . C T 133.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0
CP000253.1 358 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:12:175,12,0
CP000253.1 393 . A G 275.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:304,21,0
CP000253.1 903 . C T 1857.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1886,132,0
CP000253.1 927 . G A 2164.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2193,154,0
CP000253.1 939 . G A 2093.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8695;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2122,150,0
CP000253.1 987 . T G 1748.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.439;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.59;ReadPosRankSum=0.621;SOR=0.289 GT:AD:DP:GQ:PL 1/1:1,80:81:99:1777,104,0
CP000253.1 1194 . C T 748.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4826;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,32:33:57:777,57,0
CP000253.1 1197 . G A 839.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.09;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:63:868,63,0
CP000253.1 1641 . A G 1565.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1594,108,0
CP000253.1 1924 . G A 404.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:433,30,0
CP000253.1 1930 . A T 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 1931 . A G 220.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:249,18,0
CP000253.1 1953 . G A 580.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:609,42,0
CP000253.1 1962 . G A 709.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:51:738,51,0
CP000253.1 2063 . A C 921.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:38:66:950,66,0
CP000253.1 2288 . T C 884.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:63:913,63,0
CP000253.1 2605 . A G 2313.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2342,163,0
CP000253.1 3001 . G A 1847.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1876,132,0
CP000253.1 3058 . G A 2114.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.67;MQ0=1;QD=22.99;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2143,147,0
CP000253.1 3363 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 3385 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 3510 . A T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 3656 . T C 1223.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6377;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,49:50:90:1252,90,0
CP000253.1 4580 . G A 6657.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.893;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6585;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.74;ReadPosRankSum=0.835;SOR=0.460 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6686,482,0
CP000253.1 5229 . C A 5435.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.8331;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,220:221:99:5464,385,0
CP000253.1 5369 . T C 4985.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.225;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6387;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.31;ReadPosRankSum=2.618;SOR=0.610 GT:AD:DP:GQ:PL 1/1:3,194:199:99:5014,355,0
CP000253.1 6272 . C T 3200.06 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3229,232,0
CP000253.1 7505 . A G 2504.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5580;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2533,178,0
CP000253.1 7517 . T A 2428.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7075;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,94:96:99:2457,175,0
CP000253.1 7529 . C A 2568.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.941;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.95;ReadPosRankSum=-0.858;SOR=0.556 GT:AD:DP:GQ:PL 1/1:1,98:99:99:2597,184,0
CP000253.1 8126 . T A 5352.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5138;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,219:219:99:5381,373,0
CP000253.1 8373 . G A 1129.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.56;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:84:1158,84,0
CP000253.1 8396 . G A 1921.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.45;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1950,141,0
CP000253.1 8400 . T C 2107.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.02;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:81:99:2136,154,0
CP000253.1 8405 . G A 2229.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=1.139 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2258,163,0
CP000253.1 8423 . G A 2553.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2582,181,0
CP000253.1 8426 . T A 2516.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2545,181,0
CP000253.1 8433 . A C 2526.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4236;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2555,181,0
CP000253.1 8462 . A T 2837.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2866,202,0
CP000253.1 8468 . T C 2878.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,119:120:99:2907,211,0
CP000253.1 8489 . C T 3007.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3036,214,0
CP000253.1 8495 . G A 3073.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3102,217,0
CP000253.1 8498 . C T 3037.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3066,217,0
CP000253.1 8504 . C T 3001.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3030,214,0
CP000253.1 8505 . T C 3009.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3038,214,0
CP000253.1 8507 . A C 3095.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.960;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0230;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.77;ReadPosRankSum=1.719;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,124:125:99:3124,223,0
CP000253.1 8525 . A T 3552.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3581,253,0
CP000253.1 8723 . C T 6424.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0843;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=26.33;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,244:246:99:6453,458,0
CP000253.1 9203 . C T 5943.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.929;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4906;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.91;ReadPosRankSum=-1.001;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,212:215:99:5972,430,0
CP000253.1 9729 . T G 765.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:57:794,57,0
CP000253.1 9755 . C T 985.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.38;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:72:1014,72,0
CP000253.1 9812 . C T 1866.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.45;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1895,135,0
CP000253.1 9911 . G A 3629.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3658,259,0
CP000253.1 9977 . C T 4125.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3777;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4154,292,0
CP000253.1 10130 . T A 4872.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.605;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.2576;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=0.972;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,195:198:99:4901,349,0
CP000253.1 10601 . G A 379.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:30:408,30,0
CP000253.1 11057 . T C 1744.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.975;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.90;ReadPosRankSum=1.286;SOR=0.491 GT:AD:DP:GQ:PL 1/1:1,72:73:99:1773,123,0
CP000253.1 11300 . G A 2716.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2745,193,0
CP000253.1 11459 . A G 5015.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.835;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.5823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=0.440;SOR=0.349 GT:AD:DP:GQ:PL 1/1:1,204:207:99:5044,355,0
CP000253.1 11616 . G T 5799.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.594;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.27;ReadPosRankSum=0.051;SOR=0.827 GT:AD:DP:GQ:PL 1/1:2,237:240:99:5828,412,0
CP000253.1 11618 . A T 5730.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2865;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,233:234:99:5759,406,0
CP000253.1 11700 . T G 5528.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7556;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5557,394,0
CP000253.1 12207 . C T 5167.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9576;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,197:199:99:5196,367,0
CP000253.1 12248 . A G 4528.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.471;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6110;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=9.461;QD=25.30;ReadPosRankSum=1.222;SOR=0.202 GT:AD:DP:GQ:PL 1/1:2,177:179:99:4557,300,0
CP000253.1 12257 . T C 4290.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.093 GT:AD:DP:GQ:PL 1/1:0,169:172:99:4319,307,0
CP000253.1 12284 . C T 4210.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8345;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.200 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4239,298,0
CP000253.1 12287 . G A 4178.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2053;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=1.186 GT:AD:DP:GQ:PL 1/1:0,161:162:99:4207,298,0
CP000253.1 12293 . T G 3912.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=155;Dels=0.00;ExcessHet=3.0103;FS=3.849;HaplotypeScore=14.9342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=0.884;SOR=0.849 GT:AD:DP:GQ:PL 1/1:1,152:155:99:3941,280,0
CP000253.1 12329 . T C 3097.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.988 GT:AD:DP:GQ:PL 1/1:0,129:131:99:3126,220,0
CP000253.1 12471 . A T 955.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,36:36:72:984,72,0
CP000253.1 13196 . C A 3668.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1009;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,161:161:99:3697,253,0
CP000253.1 13700 . C T 4601.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8419;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,190:191:99:4630,322,0
CP000253.1 13794 . T A 2450.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.075;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6493;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.07;ReadPosRankSum=1.678;SOR=0.466 GT:AD:DP:GQ:PL 1/1:1,93:94:99:2479,175,0
CP000253.1 14196 . A G 669.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.61;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:48:698,48,0
CP000253.1 14323 . G T 706.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:735,51,0
CP000253.1 14338 . A T 580.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:26:42:609,42,0
CP000253.1 14348 . G T 498.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:527,36,0
CP000253.1 14349 . G T 500.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:529,36,0
CP000253.1 14353 . C T 495.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:524,36,0
CP000253.1 14361 . T A 498.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:527,36,0
CP000253.1 14390 . T A 524.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:553,39,0
CP000253.1 14417 . G A 385.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.801;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.69;ReadPosRankSum=1.025;SOR=1.000 GT:AD:DP:GQ:PL 1/1:1,16:17:30:414,30,0
CP000253.1 14437 . G T 280.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:14:21:309,21,0
CP000253.1 14467 . C T 230.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:259,18,0
CP000253.1 14479 . T A 220.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:249,18,0
CP000253.1 14490 . G A 226.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:255,18,0
CP000253.1 14491 . A G 231.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:260,18,0
CP000253.1 14515 . A G 276.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:305,21,0
CP000253.1 14557 . C A 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 14574 . A G 305.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:334,24,0
CP000253.1 14583 . C A 352.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:381,27,0
CP000253.1 14587 . C T 357.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:386,27,0
CP000253.1 14589 . A G 350.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:379,27,0
CP000253.1 14595 . T G 317.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:346,24,0
CP000253.1 14598 . G A 344.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:373,27,0
CP000253.1 14600 . A T 348.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:377,27,0
CP000253.1 14623 . A G 396.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:425,30,0
CP000253.1 14725 . A G 782.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:57:811,57,0
CP000253.1 14754 . G A 1202.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1231,87,0
CP000253.1 14848 . G A 1921.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8567;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:84:99:1950,135,0
CP000253.1 14922 . T G 3185.74 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=1.092 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3214,229,0
CP000253.1 15126 . C T 5915.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0539;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,249:250:99:5944,412,0
CP000253.1 15413 . A G 2337.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2366,169,0
CP000253.1 15524 . C T 1878.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4626;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1907,132,0
CP000253.1 15723 . G A 673.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:51:702,51,0
CP000253.1 15828 . T G 776.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:57:805,57,0
CP000253.1 15831 . A T 764.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:57:793,57,0
CP000253.1 15834 . T C 776.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:57:805,57,0
CP000253.1 15845 . G A 877.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:66:906,66,0
CP000253.1 15848 . T C 855.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.53;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:63:884,63,0
CP000253.1 15852 . T A 854.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.49;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:63:883,63,0
CP000253.1 15870 . C T 952.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:69:981,69,0
CP000253.1 15887 . C T 893.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:66:922,66,0
CP000253.1 16136 . T C 2621.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9585;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2650,184,0
CP000253.1 16142 . G A 2629.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9590;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2658,184,0
CP000253.1 16201 . C T 3384.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6128;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3413,235,0
CP000253.1 16528 . C T 2505.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0169;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2534,178,0
CP000253.1 16717 . T C 2992.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.753;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.75;ReadPosRankSum=1.318;SOR=0.105 GT:AD:DP:GQ:PL 1/1:2,124:128:99:3021,211,0
CP000253.1 16856 . G A 2094.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2123,147,0
CP000253.1 16876 . A G 2142.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2171,151,0
CP000253.1 16882 . G C 2111.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2140,150,0
CP000253.1 16921 . T C 1733.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1762,123,0
CP000253.1 16990 . G A 1426.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=1.047 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1455,102,0
CP000253.1 17079 . A G 18.82 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.937;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=0.94;ReadPosRankSum=-2.984;SOR=0.495 GT:AD:DP:GQ:PL 0/1:16,4:20:47:47,0,360
CP000253.1 17088 . C T 431.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.59;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:460,33,0
CP000253.1 17101 . C T 444.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:473,33,0
CP000253.1 17128 . A G 518.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:547,39,0
CP000253.1 17157 . T A 361.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:390,27,0
CP000253.1 17327 . T C 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 17425 . G A 1385.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:96:1414,96,0
CP000253.1 17469 . A G 1233.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:57:87:1262,87,0
CP000253.1 17542 . A G 1537.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1566,108,0
CP000253.1 17676 . A G 2216.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2245,157,0
CP000253.1 17941 . A G 1753.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1782,123,0
CP000253.1 18196 . G A 2801.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9106;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2830,199,0
CP000253.1 18426 . C T 2763.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1998;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2792,193,0
CP000253.1 18630 . G A 1442.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4423;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1471,102,0
CP000253.1 18644 . G A 1269.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.061;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.16;ReadPosRankSum=1.299;SOR=0.762 GT:AD:DP:GQ:PL 1/1:2,58:60:52:1298,52,0
CP000253.1 18770 . C T 488.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:517,36,0
CP000253.1 18878 . G T 990.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.02;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1019,72,0
CP000253.1 18914 . C T 1221.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:87:1250,87,0
CP000253.1 18932 . C T 1185.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1214,87,0
CP000253.1 18965 . T C 1007.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1036,75,0
CP000253.1 18968 . C T 936.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.76;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,35:35:69:965,69,0
CP000253.1 18974 . A G 921.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,35:35:69:950,69,0
CP000253.1 18977 . C T 949.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.14;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,35:35:69:978,69,0
CP000253.1 19106 . C T 2095.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6265;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2124,150,0
CP000253.1 19139 . C T 2334.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.880;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.58;ReadPosRankSum=-0.073;SOR=0.371 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2363,169,0
CP000253.1 19181 . A G 2732.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2761,199,0
CP000253.1 19283 . T A 4149.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5705;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4178,298,0
CP000253.1 19481 . A T 6901.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.3119;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=27.83;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6930,506,0
CP000253.1 19491 . C T 6644.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.623;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.9312;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.074;QD=26.90;ReadPosRankSum=2.042;SOR=0.480 GT:AD:DP:GQ:PL 1/1:3,244:248:99:6673,446,0
CP000253.1 19514 . T A 6912.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.652;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.65;ReadPosRankSum=0.201;SOR=0.709 GT:AD:DP:GQ:PL 1/1:2,248:250:99:6941,461,0
CP000253.1 19709 . G A 6746.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.7541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.35;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,238:238:99:6775,491,0
CP000253.1 20144 . C T 4522.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=39.4614;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.92;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,168:169:99:4551,328,0
CP000253.1 20192 . G T 3854.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2032;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3883,277,0
CP000253.1 20560 . G A 5800.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3294;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,235:236:99:5829,409,0
CP000253.1 20798 . G A 3585.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,140:143:99:3614,256,0
CP000253.1 21485 . G A 6372.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6046;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,233:235:99:6401,460,0
CP000253.1 21536 . A T 6919.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0586;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=27.90;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6948,497,0
CP000253.1 21831 . A G 6361.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.3972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.043 GT:AD:DP:GQ:PL 1/1:0,243:244:99:6390,454,0
CP000253.1 22106 . T C 1461.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5708;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1490,108,0
CP000253.1 22181 . C A 642.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.95;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:51:671,51,0
CP000253.1 22317 . A G 2876.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0211;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,119:120:99:2905,205,0
CP000253.1 22656 . A T 4774.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.924;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.52;ReadPosRankSum=-0.367;SOR=0.383 GT:AD:DP:GQ:PL 1/1:1,202:204:99:4803,334,0
CP000253.1 22803 . T C 3829.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,155:158:99:3858,274,0
CP000253.1 23010 . T C 5189.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,206:206:99:5218,370,0
CP000253.1 23016 . A T 5378.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0459;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,217:217:99:5407,379,0
CP000253.1 23029 . C T 5429.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9130;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,226:229:99:5458,379,0
CP000253.1 23220 . A G 5990.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.915;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2452;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=0.014;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,240:242:99:6019,424,0
CP000253.1 23316 . G A 5644.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.394;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.3337;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.87;ReadPosRankSum=0.687;SOR=0.814 GT:AD:DP:GQ:PL 1/1:2,225:228:99:5673,403,0
CP000253.1 23373 . T C 4685.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.919;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8386;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.91;ReadPosRankSum=0.760;SOR=0.509 GT:AD:DP:GQ:PL 1/1:1,195:196:99:4714,331,0
CP000253.1 23588 . A G 4646.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5390;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,194:195:99:4675,325,0
CP000253.1 23747 . A G 679.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6998;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,28:28:51:708,51,0
CP000253.1 23799 . T C 505.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:21:39:534,39,0
CP000253.1 23801 . A T 513.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:39:542,39,0
CP000253.1 23804 . C T 469.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.37;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:36:498,36,0
CP000253.1 23840 . A T 388.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:30:417,30,0
CP000253.1 23855 . C T 312.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:24:341,24,0
CP000253.1 23878 . G A 389.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:30:418,30,0
CP000253.1 23910 . T A 353.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:382,27,0
CP000253.1 23924 . G T 304.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:24:333,24,0
CP000253.1 23928 . G T 307.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:24:336,24,0
CP000253.1 23985 . C T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 24098 . A G 491.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.35;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:520,36,0
CP000253.1 24425 . A T 630.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:45:659,45,0
CP000253.1 24549 . G A 1052.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1745;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1081,75,0
CP000253.1 24639 . T C 758.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:787,54,0
CP000253.1 24690 . G A 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 24694 . C T 266.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.52;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:295,21,0
CP000253.1 24724 . G T 231.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:260,18,0
CP000253.1 25444 . C T 1912.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:83:99:1941,135,0
CP000253.1 25735 . T C 1156.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.759;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.61;ReadPosRankSum=-0.390;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,48:49:84:1185,84,0
CP000253.1 25737 . A G 1207.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1236,87,0
CP000253.1 25752 . C T 1273.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2322;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.59;ReadPosRankSum=1.349;SOR=0.282 GT:AD:DP:GQ:PL 1/1:1,53:56:90:1302,90,0
CP000253.1 25803 . G T 1211.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1240,87,0
CP000253.1 26604 . G T 767.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.42;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:29:57:796,57,0
CP000253.1 26634 . C T 779.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:60:808,60,0
CP000253.1 26742 . A T 1962.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,86:86:99:1991,138,0
CP000253.1 27054 . T C 2117.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0784;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.87;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,76:80:99:2146,157,0
CP000253.1 27129 . T C 2745.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.900;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2968;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.74;ReadPosRankSum=1.078;SOR=0.398 GT:AD:DP:GQ:PL 1/1:1,110:114:99:2774,196,0
CP000253.1 27246 . T C 3960.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,165:165:99:3989,280,0
CP000253.1 27478 . G A 5935.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.86;SOR=1.035 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5964,430,0
CP000253.1 27502 . A G 6386.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.29;SOR=1.164 GT:AD:DP:GQ:PL 1/1:0,234:235:99:6415,460,0
CP000253.1 27691 . A T 6778.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3671;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.22;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6807,500,0
CP000253.1 27796 . T G 7134.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.419;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.3698;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.77;ReadPosRankSum=0.549;SOR=0.199 GT:AD:DP:GQ:PL 1/1:2,246:248:99:7163,536,0
CP000253.1 27802 . G A 7250.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.689;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.3626;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.84;ReadPosRankSum=-0.025;SOR=0.193 GT:AD:DP:GQ:PL 1/1:2,241:243:99:7279,501,0
CP000253.1 27804 . A G 7114.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.9815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.40;SOR=1.100 GT:AD:DP:GQ:PL 1/1:0,242:242:99:7143,533,0
CP000253.1 27816 . T C 7225.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.02;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,249:250:99:7254,533,0
CP000253.1 27862 . T C 6915.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.4728;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.11;SOR=0.986 GT:AD:DP:GQ:PL 1/1:0,246:250:99:6944,518,0
CP000253.1 27916 . G A 7023.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.6650;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=28.44;ReadPosRankSum=1.382;SOR=0.474 GT:AD:DP:GQ:PL 1/1:1,246:248:99:7052,515,0
CP000253.1 27964 . C T 6737.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.06;SOR=1.120 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6766,491,0
CP000253.1 27970 . T C 6575.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.693;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.52;ReadPosRankSum=-1.558;SOR=0.418 GT:AD:DP:GQ:PL 1/1:1,247:250:99:6604,482,0
CP000253.1 28321 . G A 2940.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2900;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.02;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2969,214,0
CP000253.1 28402 . T C 3531.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7399;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3560,256,0
CP000253.1 28459 . T C 4398.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.0057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,176:178:99:4427,313,0
CP000253.1 28486 . T C 4292.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3438;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,182:183:99:4321,307,0
CP000253.1 28531 . C T 4301.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,179:180:99:4330,304,0
CP000253.1 28549 . A G 4382.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,175:177:99:4411,313,0
CP000253.1 28564 . T G 4850.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.228;DP=195;Dels=0.00;ExcessHet=3.0103;FS=3.123;HaplotypeScore=16.4720;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.88;ReadPosRankSum=1.457;SOR=0.322 GT:AD:DP:GQ:PL 1/1:1,194:195:99:4879,351,0
CP000253.1 28586 . T A 4758.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,191:193:99:4787,337,0
CP000253.1 28690 . T C 5133.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.881;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.99;ReadPosRankSum=0.453;SOR=0.548 GT:AD:DP:GQ:PL 1/1:1,213:215:99:5162,361,0
CP000253.1 28762 . C T 5170.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6397;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,206:210:99:5199,367,0
CP000253.1 28909 . C T 3114.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8165;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3143,226,0
CP000253.1 28958 . A G 2522.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.769;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5457;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.01;ReadPosRankSum=0.161;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,96:97:99:2551,184,0
CP000253.1 29041 . A G 1872.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9908;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1901,135,0
CP000253.1 29155 . G A 1632.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1661,117,0
CP000253.1 29158 . C T 1492.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1521,105,0
CP000253.1 29161 . A G 1491.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1520,105,0
CP000253.1 29164 . T C 1518.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1547,108,0
CP000253.1 29171 . G T 1467.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.764;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.30;ReadPosRankSum=-0.138;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,62:63:99:1496,105,0
CP000253.1 29173 . T A 1567.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1596,111,0
CP000253.1 29188 . C T 1932.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1961,138,0
CP000253.1 29191 . G A 1935.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1964,138,0
CP000253.1 29196 . G A 1953.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1982,138,0
CP000253.1 29200 . A T 1903.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1932,135,0
CP000253.1 29202 . A G 1937.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1966,138,0
CP000253.1 29215 . T C 2058.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2087,147,0
CP000253.1 29231 . G A 2155.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4697;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2184,154,0
CP000253.1 29236 . T C 2038.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:84:99:2067,147,0
CP000253.1 29245 . A G 2117.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.802;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.80;ReadPosRankSum=-0.253;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,88:89:99:2146,150,0
CP000253.1 29248 . T C 2103.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2132,147,0
CP000253.1 29251 . C T 2301.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.863;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.23;ReadPosRankSum=-1.315;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2330,166,0
CP000253.1 29266 . A G 2246.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2275,160,0
CP000253.1 29294 . A G 2174.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2203,159,0
CP000253.1 29362 . G T 2480.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.363;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6633;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.97;ReadPosRankSum=2.430;SOR=0.811 GT:AD:DP:GQ:PL 1/1:2,106:109:99:2509,178,0
CP000253.1 29368 . T A 2559.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2588,184,0
CP000253.1 29464 . T C 1877.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:79:99:1906,132,0
CP000253.1 29527 . T C 1616.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1645,114,0
CP000253.1 29608 . C T 785.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:57:814,57,0
CP000253.1 29658 . C T 517.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:546,39,0
CP000253.1 29661 . T G 517.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:546,39,0
CP000253.1 29664 . A T 534.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:42:563,42,0
CP000253.1 29666 . T C 512.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:541,39,0
CP000253.1 29671 . C A 567.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:42:596,42,0
CP000253.1 29675 . T C 525.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:554,39,0
CP000253.1 29676 . G A 555.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:42:584,42,0
CP000253.1 29680 . T C 565.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.94;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:42:594,42,0
CP000253.1 29689 . C T 613.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:45:642,45,0
CP000253.1 29692 . C T 568.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:597,42,0
CP000253.1 29729 . G T 397.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:426,30,0
CP000253.1 29738 . G A 364.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:393,27,0
CP000253.1 29739 . T C 357.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:386,27,0
CP000253.1 30084 . A C 2277.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.766;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.90;ReadPosRankSum=1.367;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,103:104:99:2306,159,0
CP000253.1 30231 . A G 2582.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2611,181,0
CP000253.1 30581 . C G 3747.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,161:161:99:3776,262,0
CP000253.1 30588 . A G 3693.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7524;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,160:161:99:3722,259,0
CP000253.1 30597 . C T 3929.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,171:171:99:3958,274,0
CP000253.1 30788 . T C 1263.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5623;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:51:93:1292,93,0
CP000253.1 30791 . G T 1281.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5278;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:51:93:1310,93,0
CP000253.1 30801 . C G 1125.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1154,81,0
CP000253.1 30805 . T C 1128.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1157,81,0
CP000253.1 30843 . G A 776.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:57:805,57,0
CP000253.1 30875 . C A 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 30878 . C T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 30881 . G A 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 30882 . A T 173.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:202,15,0
CP000253.1 30892 . G A 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 30893 . T A 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 31058 . A G 1990.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.207 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2019,144,0
CP000253.1 31095 . C T 2548.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5837;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=1.081 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2577,181,0
CP000253.1 31106 . G C 2507.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5397;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2536,178,0
CP000253.1 31117 . C T 2715.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3309;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,110:111:99:2744,193,0
CP000253.1 31161 . C A 3038.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9758;MLEAC=2;MLEAF=1.00;MQ=59.78;MQ0=0;QD=24.91;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3067,214,0
CP000253.1 31187 . T A 2838.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0171;MLEAC=2;MLEAF=1.00;MQ=59.77;MQ0=0;QD=24.47;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,116:117:99:2867,202,0
CP000253.1 31189 . C T 2596.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.395;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2289;MLEAC=2;MLEAF=1.00;MQ=59.77;MQ0=0;MQRankSum=6.165;QD=22.58;ReadPosRankSum=0.825;SOR=0.518 GT:AD:DP:GQ:PL 1/1:3,112:117:99:2625,189,0
CP000253.1 31193 . C T 2850.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3844;MLEAC=2;MLEAF=1.00;MQ=59.77;MQ0=0;QD=24.37;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2879,202,0
CP000253.1 31194 . A G 2831.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2166;MLEAC=2;MLEAF=1.00;MQ=59.77;MQ0=0;QD=24.41;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,116:117:99:2860,202,0
CP000253.1 31226 . G A 3233.06 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3262,235,0
CP000253.1 31244 . T A 2687.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2716,193,0
CP000253.1 31246 . C T 2773.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2802,202,0
CP000253.1 31252 . G A 2800.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7121;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=1.089 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2829,202,0
CP000253.1 31253 . C T 2792.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7387;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=1.049 GT:AD:DP:GQ:PL 1/1:0,109:111:99:2821,202,0
CP000253.1 31272 . C T 2950.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,112:114:99:2979,214,0
CP000253.1 31273 . C T 2824.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,110:112:99:2853,208,0
CP000253.1 31274 . A T 2886.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2915,211,0
CP000253.1 31294 . T C 3334.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8835;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.05;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3363,247,0
CP000253.1 31319 . A G 3085.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3183;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=24.89;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3114,226,0
CP000253.1 31321 . G A 3194.83 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6329;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.19;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3223,229,0
CP000253.1 31325 . C T 3460.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8588;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=27.04;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:131:99:3489,253,0
CP000253.1 31364 . C A 3219.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.639;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7807;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=0.000;QD=25.15;ReadPosRankSum=1.625;SOR=0.453 GT:AD:DP:GQ:PL 1/1:1,127:129:99:3248,232,0
CP000253.1 31365 . A T 3200.06 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.465;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5414;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=-0.063;QD=25.00;ReadPosRankSum=1.528;SOR=0.791 GT:AD:DP:GQ:PL 1/1:2,126:129:99:3228,235,0
CP000253.1 31373 . G A 3406.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0229;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.41;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,129:132:99:3435,244,0
CP000253.1 31378 . A C 3319.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.350;DP=132;Dels=0.00;ExcessHet=3.0103;FS=3.191;HaplotypeScore=13.9502;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=-0.062;QD=25.15;ReadPosRankSum=1.314;SOR=0.382 GT:AD:DP:GQ:PL 1/1:2,130:132:99:3348,220,0
CP000253.1 31427 . T C 3274.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.4240;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,130:132:99:3303,238,0
CP000253.1 31432 . C T 3355.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.151;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.1273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.49;ReadPosRankSum=2.360;SOR=0.708 GT:AD:DP:GQ:PL 1/1:2,135:137:99:3384,247,0
CP000253.1 31533 . G A 3856.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.5704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.16;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3885,283,0
CP000253.1 31667 . C G 5289.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.757;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3346;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.31;ReadPosRankSum=-0.381;SOR=0.673 GT:AD:DP:GQ:PL 1/1:1,208:213:99:5318,385,0
CP000253.1 31754 . T C 6097.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.691;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3067;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=15.427;QD=25.73;ReadPosRankSum=1.484;SOR=0.309 GT:AD:DP:GQ:PL 1/1:1,236:239:99:6126,439,0
CP000253.1 31763 . A G 6215.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.573;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=41.1739;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.097;QD=25.58;ReadPosRankSum=-1.094;SOR=0.399 GT:AD:DP:GQ:PL 1/1:4,239:244:99:6244,442,0
CP000253.1 31787 . G A 6452.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.9249;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.12;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,247:249:99:6481,460,0
CP000253.1 31796 . A G 6269.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3763;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.91;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,242:244:99:6298,448,0
CP000253.1 31826 . T C 6297.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8191;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.39;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6326,451,0
CP000253.1 31865 . A G 6282.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.743;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.9743;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=15.716;QD=25.54;ReadPosRankSum=-1.324;SOR=0.422 GT:AD:DP:GQ:PL 1/1:1,245:248:99:6311,454,0
CP000253.1 31877 . C T 6108.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.523;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.67;ReadPosRankSum=-0.717;SOR=0.320 GT:AD:DP:GQ:PL 1/1:2,236:238:99:6137,442,0
CP000253.1 31913 . G A 5941.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7241;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,229:230:99:5970,421,0
CP000253.1 31970 . A G 6148.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3064;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,238:239:99:6177,442,0
CP000253.1 32060 . T C 6198.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,244:247:99:6227,439,0
CP000253.1 32081 . A C 6043.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.731;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1133;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.61;ReadPosRankSum=-0.624;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,235:237:99:6072,433,0
CP000253.1 32120 . G A 6554.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6583,464,0
CP000253.1 32157 . A G 6116.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3034;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.17;ReadPosRankSum=-1.519;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,242:243:99:6145,433,0
CP000253.1 32171 . T C 5902.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9197;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,237:238:99:5931,421,0
CP000253.1 32189 . G A 6106.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6135,430,0
CP000253.1 32297 . T A 5344.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4555;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,209:210:99:5373,379,0
CP000253.1 32306 . A T 5314.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.05;ReadPosRankSum=1.376;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,203:206:99:5343,382,0
CP000253.1 32318 . C T 5027.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7895;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,193:195:99:5056,358,0
CP000253.1 32573 . G A 2783.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7241;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2812,205,0
CP000253.1 32594 . C T 2775.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5405;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.95;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2804,205,0
CP000253.1 32612 . G A 2715.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2353;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;QD=26.63;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,102:105:99:2744,196,0
CP000253.1 32627 . G A 2777.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1399;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;QD=25.72;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,108:109:99:2806,199,0
CP000253.1 32669 . C T 2476.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0280;MLEAC=2;MLEAF=1.00;MQ=59.81;MQ0=0;QD=25.02;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2505,181,0
CP000253.1 32687 . A G 2522.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8033;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2551,184,0
CP000253.1 32714 . T C 2141.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:86:99:2170,154,0
CP000253.1 32780 . C T 2414.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7165;MLEAC=2;MLEAF=1.00;MQ=59.75;MQ0=0;QD=25.15;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2443,175,0
CP000253.1 32837 . T C 2706.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2735,199,0
CP000253.1 32898 . T A 3173.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7003;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3202,229,0
CP000253.1 32997 . A G 4035.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.676;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1264;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.31;ReadPosRankSum=0.397;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,165:167:99:4064,286,0
CP000253.1 33012 . A G 3968.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5487;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,165:165:99:3997,280,0
CP000253.1 33013 . C T 3932.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9814;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.83;ReadPosRankSum=1.712;SOR=0.461 GT:AD:DP:GQ:PL 1/1:1,164:165:99:3961,277,0
CP000253.1 33037 . T C 3858.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7562;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,168:170:99:3887,271,0
CP000253.1 33042 . G A 3881.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7013;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,167:170:99:3910,271,0
CP000253.1 33054 . A C 4054.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.574;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.30;ReadPosRankSum=0.558;SOR=0.716 GT:AD:DP:GQ:PL 1/1:2,172:174:99:4083,283,0
CP000253.1 33062 . T G 3997.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.729;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.24;ReadPosRankSum=-1.048;SOR=0.228 GT:AD:DP:GQ:PL 1/1:1,171:172:99:4026,280,0
CP000253.1 33063 . C A 4020.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.809;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5429;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.38;ReadPosRankSum=0.816;SOR=0.228 GT:AD:DP:GQ:PL 1/1:1,171:172:99:4049,280,0
CP000253.1 33083 . G A 4151.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4180,289,0
CP000253.1 33085 . T C 4075.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.453;DP=174;Dels=0.00;ExcessHet=3.0103;FS=3.116;HaplotypeScore=17.1252;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.42;ReadPosRankSum=-1.165;SOR=0.298 GT:AD:DP:GQ:PL 1/1:4,170:174:99:4104,289,0
CP000253.1 33087 . G A 4089.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.024;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.64;ReadPosRankSum=0.433;SOR=0.705 GT:AD:DP:GQ:PL 1/1:2,171:174:99:4118,247,0
CP000253.1 33135 . A T 4409.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.851;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.8850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.50;ReadPosRankSum=1.155;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,179:184:99:4438,313,0
CP000253.1 33170 . A C 3982.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.305;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.4211;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.14;ReadPosRankSum=1.073;SOR=0.129 GT:AD:DP:GQ:PL 1/1:2,163:166:99:4011,295,0
CP000253.1 33178 . C T 4008.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.446;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.0857;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.59;ReadPosRankSum=0.369;SOR=0.866 GT:AD:DP:GQ:PL 1/1:2,161:166:99:4037,250,0
CP000253.1 33245 . T C 3274.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.152 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3303,238,0
CP000253.1 33256 . A C 3289.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.966;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8019;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.90;ReadPosRankSum=1.514;SOR=0.475 GT:AD:DP:GQ:PL 1/1:1,126:128:99:3318,241,0
CP000253.1 33273 . T G 2983.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7294;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=1.188 GT:AD:DP:GQ:PL 1/1:0,116:117:99:3012,214,0
CP000253.1 33320 . C T 1577.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=-0.633;SOR=0.870 GT:AD:DP:GQ:PL 1/1:1,62:64:99:1606,114,0
CP000253.1 33337 . T C 1386.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:60:99:1415,99,0
CP000253.1 33386 . A G 1427.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8368;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1456,105,0
CP000253.1 33395 . G T 1384.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:57:99:1413,99,0
CP000253.1 33400 . C A 1432.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.837;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=1.487;SOR=0.514 GT:AD:DP:GQ:PL 1/1:1,55:56:99:1461,105,0
CP000253.1 33411 . T C 1568.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1597,117,0
CP000253.1 33428 . A G 1572.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:62:99:1601,117,0
CP000253.1 33546 . G A 2480.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=1.227 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2509,178,0
CP000253.1 33563 . C T 2462.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.20;ReadPosRankSum=-1.143;SOR=0.514 GT:AD:DP:GQ:PL 1/1:1,93:95:99:2491,178,0
CP000253.1 33834 . T C 5436.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,232:234:99:5465,391,0
CP000253.1 33891 . C T 5122.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=41.9262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,218:220:99:5151,364,0
CP000253.1 34002 . T A 3383.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.850;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2835;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;MQRankSum=0.000;QD=25.06;ReadPosRankSum=1.578;SOR=0.478 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3412,247,0
CP000253.1 34087 . C A 2585.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.830;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5183;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.35;ReadPosRankSum=1.733;SOR=1.005 GT:AD:DP:GQ:PL 1/1:1,101:104:99:2614,187,0
CP000253.1 34119 . A G 2242.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2447;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=1.477 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2271,163,0
CP000253.1 34128 . C T 2323.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.66;SOR=1.582 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2352,169,0
CP000253.1 34149 . A T 1387.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1416,102,0
CP000253.1 35008 . A T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 35275 . A G 499.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.73;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:528,36,0
CP000253.1 36604 . G A 649.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=48.99;MQ0=8;QD=18.05;SOR=1.179 GT:AD:DP:GQ:PL 1/1:4,32:36:48:678,48,0
CP000253.1 36612 . A G 640.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=48.27;MQ0=8;QD=18.85;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,34:34:48:669,48,0
CP000253.1 36647 . G T 541.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0941;MLEAC=2;MLEAF=1.00;MQ=46.02;MQ0=10;QD=16.42;SOR=1.179 GT:AD:DP:GQ:PL 1/1:4,29:34:42:570,42,0
CP000253.1 36731 . C T 255.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=53.10;MQ0=0;QD=21.32;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:284,21,0
CP000253.1 36754 . G A 87.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=43.66;MQ0=0;QD=17.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:115,9,0
CP000253.1 36769 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.33;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 36782 . T C 40.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=39.50;MQ0=0;QD=20.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0
CP000253.1 36817 . T C 50.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=32.38;MQ0=0;QD=16.91;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:6:78,6,0
CP000253.1 36827 . G A 11.83 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=27.80;MQ0=0;QD=5.91;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:3:38,3,0
CP000253.1 36983 . A C 224.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.23;MQ0=2;QD=20.44;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,11:11:18:253,18,0
CP000253.1 37001 . C A 224.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.42;MQ0=0;QD=24.98;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:253,18,0
CP000253.1 37005 . C T 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.42;MQ0=0;QD=25.32;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 37028 . A T 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 37036 . G A 179.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:208,15,0
CP000253.1 37049 . G A 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 37059 . T C 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 37121 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 37125 . T C 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 37132 . T C 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 37163 . T G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 37206 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:2:3:41,3,0
CP000253.1 37210 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 37740 . C T 1878.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1907,132,0
CP000253.1 38046 . G A 1394.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1423,99,0
CP000253.1 38325 . C T 1598.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1627,111,0
CP000253.1 38330 . T C 1684.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1713,117,0
CP000253.1 38336 . A G 1818.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1847,126,0
CP000253.1 38453 . C T 2139.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2168,147,0
CP000253.1 38745 . C T 973.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:42:69:1002,69,0
CP000253.1 38849 . C T 1179.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1208,84,0
CP000253.1 39023 . G A 2910.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2939,205,0
CP000253.1 39041 . T C 2985.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5556;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3014,214,0
CP000253.1 39168 . A C 4752.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.743;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.7349;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.11;ReadPosRankSum=-1.442;SOR=0.253 GT:AD:DP:GQ:PL 1/1:1,214:215:99:4781,328,0
CP000253.1 40416 . G T 689.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:718,51,0
CP000253.1 40628 . G A 407.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:436,30,0
CP000253.1 40934 . T C 872.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6814;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:38:63:901,63,0
CP000253.1 42690 . A T 581.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.145;DP=44;Dels=0.00;ExcessHet=3.0103;FS=1.366;HaplotypeScore=3.7152;MLEAC=1;MLEAF=0.500;MQ=56.72;MQ0=3;MQRankSum=2.139;QD=13.22;ReadPosRankSum=2.274;SOR=0.356 GT:AD:DP:GQ:PL 0/1:16,28:44:99:610,0,282
CP000253.1 42729 . G T 1513.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1155;MLEAC=2;MLEAF=1.00;MQ=56.45;MQ0=5;QD=23.29;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1542,111,0
CP000253.1 42732 . T A 866.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.106;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1155;MLEAC=1;MLEAF=0.500;MQ=56.45;MQ0=5;MQRankSum=1.326;QD=13.33;ReadPosRankSum=-0.140;SOR=0.698 GT:AD:DP:GQ:PL 0/1:24,41:65:99:895,0,421
CP000253.1 42734 . G A 393.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.105;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1155;MLEAC=1;MLEAF=0.500;MQ=56.45;MQ0=5;MQRankSum=-1.262;QD=6.15;ReadPosRankSum=0.517;SOR=0.730 GT:AD:DP:GQ:PL 0/1:40,24:65:99:422,0,880
CP000253.1 42777 . T G 927.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.217;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3876;MLEAC=1;MLEAF=0.500;MQ=55.64;MQ0=5;MQRankSum=3.117;QD=12.05;ReadPosRankSum=-0.080;SOR=0.723 GT:AD:DP:GQ:PL 0/1:35,42:77:99:956,0,653
CP000253.1 42834 . G A 1035.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.096;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1313;MLEAC=1;MLEAF=0.500;MQ=53.92;MQ0=5;MQRankSum=-5.267;QD=9.50;ReadPosRankSum=0.847;SOR=0.903 GT:AD:DP:GQ:PL 0/1:57,52:109:99:1064,0,1141
CP000253.1 42897 . T C 1764.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.953;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.578;HaplotypeScore=14.3376;MLEAC=1;MLEAF=0.500;MQ=53.05;MQ0=1;MQRankSum=-9.062;QD=10.50;ReadPosRankSum=1.986;SOR=0.836 GT:AD:DP:GQ:PL 0/1:86,82:168:99:1793,0,1798
CP000253.1 42957 . G A 4777.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8781;MLEAC=2;MLEAF=1.00;MQ=52.30;MQ0=0;QD=22.97;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,208:208:99:4806,343,0
CP000253.1 42969 . T G 1813.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.032;DP=205;Dels=0.00;ExcessHet=3.0103;FS=1.760;HaplotypeScore=12.5044;MLEAC=1;MLEAF=0.500;MQ=52.33;MQ0=0;MQRankSum=-11.522;QD=8.85;ReadPosRankSum=2.894;SOR=0.884 GT:AD:DP:GQ:PL 0/1:116,89:205:99:1842,0,2351
CP000253.1 42984 . G A 2467.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.845;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8662;MLEAC=1;MLEAF=0.500;MQ=52.38;MQ0=0;MQRankSum=11.881;QD=12.22;ReadPosRankSum=-4.290;SOR=0.687 GT:AD:DP:GQ:PL 0/1:84,118:203:99:2496,0,1664
CP000253.1 42990 . A G 2425.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.028;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1311;MLEAC=1;MLEAF=0.500;MQ=52.26;MQ0=0;MQRankSum=11.925;QD=12.13;ReadPosRankSum=-3.752;SOR=0.615 GT:AD:DP:GQ:PL 0/1:83,117:200:99:2454,0,1772
CP000253.1 43008 . C A 1611.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.001;DP=202;Dels=0.00;ExcessHet=3.0103;FS=1.113;HaplotypeScore=18.6279;MLEAC=1;MLEAF=0.500;MQ=52.34;MQ0=0;MQRankSum=-12.376;QD=7.98;ReadPosRankSum=3.495;SOR=0.797 GT:AD:DP:GQ:PL 0/1:122,80:202:99:1640,0,2609
CP000253.1 43173 . G A 2504.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8237;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2533,178,0
CP000253.1 43272 . C T 2302.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2331,166,0
CP000253.1 43293 . A G 2262.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5472;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.71;ReadPosRankSum=1.380;SOR=0.332 GT:AD:DP:GQ:PL 1/1:1,87:89:99:2291,166,0
CP000253.1 43296 . G A 2216.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4413;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2245,163,0
CP000253.1 43299 . A C 2225.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.777;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3462;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.73;ReadPosRankSum=1.733;SOR=0.232 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2254,126,0
CP000253.1 43371 . T A 2526.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.807;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0305;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.27;ReadPosRankSum=0.554;SOR=0.266 GT:AD:DP:GQ:PL 1/1:1,99:100:99:2555,181,0
CP000253.1 43397 . A G 2491.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2520,178,0
CP000253.1 43458 . C G 2301.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.754;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0384;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.98;ReadPosRankSum=-1.001;SOR=0.826 GT:AD:DP:GQ:PL 1/1:2,94:96:99:2330,127,0
CP000253.1 43470 . A G 2367.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2396,169,0
CP000253.1 43764 . A T 648.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.03;SOR=1.519 GT:AD:DP:GQ:PL 1/1:0,24:25:48:677,48,0
CP000253.1 43983 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 43991 . C G 85.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:113,9,0
CP000253.1 43993 . T A 96.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:124,9,0
CP000253.1 44041 . T G 141.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:169,12,0
CP000253.1 44083 . T G 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 44330 . G A 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 44332 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 44371 . C T 679.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:708,48,0
CP000253.1 44388 . C T 663.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:692,48,0
CP000253.1 44389 . C A 675.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:704,48,0
CP000253.1 44391 . A G 679.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:708,48,0
CP000253.1 44392 . G T 678.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:707,48,0
CP000253.1 44395 . G T 677.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:706,48,0
CP000253.1 44396 . A C 659.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:688,48,0
CP000253.1 44435 . T G 719.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:748,51,0
CP000253.1 44437 . T C 718.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:747,51,0
CP000253.1 44457 . T C 674.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:703,48,0
CP000253.1 44462 . T A 670.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:699,48,0
CP000253.1 44475 . C T 675.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:704,48,0
CP000253.1 44486 . G A 488.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:517,36,0
CP000253.1 44495 . A G 415.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:444,30,0
CP000253.1 44498 . A C 369.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:27:398,27,0
CP000253.1 44499 . C T 369.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:27:398,27,0
CP000253.1 49286 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 49292 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 49297 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 49326 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 49350 . A G 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 49414 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 49432 . T C 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 49454 . T C 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 49459 . G A 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 49504 . T C 190.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:219,15,0
CP000253.1 49550 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 49597 . T C 273.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:302,21,0
CP000253.1 49609 . T A 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 49652 . A G 303.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:332,24,0
CP000253.1 49753 . C T 758.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2463;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:54:787,54,0
CP000253.1 49795 . T C 955.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:69:984,69,0
CP000253.1 49801 . G A 897.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:38:66:926,66,0
CP000253.1 49802 . T C 869.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:38:63:898,63,0
CP000253.1 50191 . G A 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 50527 . G T 397.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:426,30,0
CP000253.1 50655 . G T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 50830 . G T 226.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:255,18,0
CP000253.1 51012 . C T 1166.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1195,84,0
CP000253.1 51273 . T G 1373.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:58:99:1402,99,0
CP000253.1 54046 . G A 829.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:60:858,60,0
CP000253.1 54107 . A C 516.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:39:545,39,0
CP000253.1 54122 . T C 335.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:364,27,0
CP000253.1 54144 . T C 175.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9658;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.32;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:204,15,0
CP000253.1 54158 . T A 80.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.19;ReadPosRankSum=-1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:29:109,0,29
CP000253.1 54164 . C T 133.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0
CP000253.1 54167 . C T 133.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0
CP000253.1 54168 . A G 124.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:152,12,0
CP000253.1 54169 . A T 129.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:157,12,0
CP000253.1 54306 . A G 1231.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.835;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.00;ReadPosRankSum=-1.241;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,55:56:87:1260,87,0
CP000253.1 54383 . T A 2002.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2031,141,0
CP000253.1 54384 . G A 2026.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2055,141,0
CP000253.1 54386 . A C 2018.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2047,141,0
CP000253.1 54410 . A G 2109.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2138,147,0
CP000253.1 54413 . G A 2109.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2138,147,0
CP000253.1 54416 . T C 2154.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:91:99:2183,153,0
CP000253.1 54445 . A C 2292.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6127;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2321,160,0
CP000253.1 54446 . G T 2307.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6127;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2336,160,0
CP000253.1 54452 . A G 2202.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2231,157,0
CP000253.1 54461 . A G 2201.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2230,154,0
CP000253.1 54481 . A G 2130.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2159,147,0
CP000253.1 54482 . T C 2087.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2116,144,0
CP000253.1 54497 . C T 1941.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1970,135,0
CP000253.1 54597 . T C 663.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.821;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.13;ReadPosRankSum=1.619;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,29:30:48:692,48,0
CP000253.1 54842 . G A 740.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:769,54,0
CP000253.1 54851 . A G 862.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:891,63,0
CP000253.1 55070 . C T 1101.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2741;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:49:78:1130,78,0
CP000253.1 55138 . C A 937.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.157;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.87;ReadPosRankSum=1.740;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,40:41:66:966,66,0
CP000253.1 55142 . T C 961.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:69:990,69,0
CP000253.1 55157 . G T 802.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:57:831,57,0
CP000253.1 55188 . A C 538.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:567,39,0
CP000253.1 55462 . A G 99.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.255;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=1;MLEAF=0.500;MQ=54.19;MQ0=2;MQRankSum=-2.972;QD=3.84;ReadPosRankSum=0.031;SOR=0.495 GT:AD:DP:GQ:PL 0/1:18,8:26:99:128,0,309
CP000253.1 55473 . A T 96.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.649;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=54.19;MQ0=2;MQRankSum=-2.972;QD=3.72;ReadPosRankSum=2.046;SOR=0.495 GT:AD:DP:GQ:PL 0/1:18,8:26:99:125,0,349
CP000253.1 55479 . C T 99.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.073;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=54.19;MQ0=2;MQRankSum=-2.972;QD=3.84;ReadPosRankSum=2.034;SOR=0.495 GT:AD:DP:GQ:PL 0/1:18,8:26:99:128,0,314
CP000253.1 55494 . C T 48.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.438;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=1;MLEAF=0.500;MQ=55.00;MQ0=2;MQRankSum=-3.917;QD=1.68;ReadPosRankSum=2.679;SOR=0.610 GT:AD:DP:GQ:PL 0/1:23,6:30:77:77,0,441
CP000253.1 55499 . T G 54.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.248;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=1;MLEAF=0.500;MQ=54.19;MQ0=2;MQRankSum=-3.186;QD=2.19;ReadPosRankSum=1.415;SOR=0.941 GT:AD:DP:GQ:PL 0/1:18,7:26:83:83,0,358
CP000253.1 55503 . T C 10.20 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.495;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=1;MLEAF=0.500;MQ=53.68;MQ0=2;MQRankSum=-4.493;QD=0.43;ReadPosRankSum=1.758;SOR=0.512 GT:AD:DP:GQ:PL 0/1:20,4:24:38:38,0,391
CP000253.1 55504 . C T 12.99 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.625;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=1;MLEAF=0.500;MQ=53.68;MQ0=2;MQRankSum=-4.493;QD=0.54;ReadPosRankSum=1.758;SOR=0.512 GT:AD:DP:GQ:PL 0/1:20,4:24:41:41,0,361
CP000253.1 55758 . C A 45.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.236;DP=17;Dels=0.00;ExcessHet=3.0103;FS=2.392;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.01;MQ0=0;MQRankSum=-2.527;QD=2.69;ReadPosRankSum=-0.627;SOR=1.561 GT:AD:DP:GQ:PL 0/1:13,4:17:74:74,0,279
CP000253.1 55760 . A G 43.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.079;DP=17;Dels=0.00;ExcessHet=3.0103;FS=2.392;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.01;MQ0=0;MQRankSum=-2.527;QD=2.57;ReadPosRankSum=-0.627;SOR=1.561 GT:AD:DP:GQ:PL 0/1:13,4:17:72:72,0,279
CP000253.1 55773 . T C 36.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.492;DP=22;Dels=0.00;ExcessHet=3.0103;FS=2.318;HaplotypeScore=2.8754;MLEAC=1;MLEAF=0.500;MQ=57.70;MQ0=0;MQRankSum=-2.985;QD=1.67;ReadPosRankSum=1.072;SOR=1.541 GT:AD:DP:GQ:PL 0/1:18,4:22:65:65,0,393
CP000253.1 55776 . C T 21.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.841;DP=26;Dels=0.00;ExcessHet=3.0103;FS=2.521;HaplotypeScore=4.8668;MLEAC=1;MLEAF=0.500;MQ=57.40;MQ0=0;MQRankSum=-2.625;QD=0.84;ReadPosRankSum=1.466;SOR=1.506 GT:AD:DP:GQ:PL 0/1:22,4:26:50:50,0,498
CP000253.1 55785 . C T 24.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.713;DP=27;Dels=0.00;ExcessHet=3.0103;FS=5.316;HaplotypeScore=5.6370;MLEAC=1;MLEAF=0.500;MQ=57.46;MQ0=0;MQRankSum=-2.263;QD=0.92;ReadPosRankSum=1.543;SOR=1.492 GT:AD:DP:GQ:PL 0/1:23,4:27:53:53,0,535
CP000253.1 55875 . A T 182.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.007;DP=34;Dels=0.00;ExcessHet=3.0103;FS=3.544;HaplotypeScore=7.9654;MLEAC=1;MLEAF=0.500;MQ=53.63;MQ0=0;MQRankSum=-3.113;QD=5.38;ReadPosRankSum=-0.614;SOR=0.980 GT:AD:DP:GQ:PL 0/1:21,13:34:99:211,0,495
CP000253.1 55891 . G A 342.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.861;DP=28;Dels=0.00;ExcessHet=3.0103;FS=6.329;HaplotypeScore=1.9913;MLEAC=1;MLEAF=0.500;MQ=50.75;MQ0=2;MQRankSum=2.252;QD=12.24;ReadPosRankSum=2.416;SOR=1.322 GT:AD:DP:GQ:PL 0/1:13,15:28:99:371,0,182
CP000253.1 55896 . A C 400.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.057;DP=28;Dels=0.00;ExcessHet=3.0103;FS=1.657;HaplotypeScore=3.9827;MLEAC=1;MLEAF=0.500;MQ=50.75;MQ0=2;MQRankSum=1.231;QD=14.31;ReadPosRankSum=3.708;SOR=0.950 GT:AD:DP:GQ:PL 0/1:9,19:28:99:429,0,123
CP000253.1 55941 . C A 385.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.875;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=50.28;MQ0=2;MQRankSum=1.732;QD=14.84;ReadPosRankSum=-0.643;SOR=0.628 GT:AD:DP:GQ:PL 0/1:7,19:26:70:414,0,70
CP000253.1 55942 . G A 384.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.068;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=50.28;MQ0=2;MQRankSum=1.732;QD=14.80;ReadPosRankSum=-0.643;SOR=0.628 GT:AD:DP:GQ:PL 0/1:7,19:26:84:413,0,84
CP000253.1 55951 . A G 548.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.9841;MLEAC=2;MLEAF=1.00;MQ=50.28;MQ0=2;QD=21.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:577,42,0
CP000253.1 55957 . A T 446.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=50.43;MQ0=2;QD=21.27;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:24:33:475,33,0
CP000253.1 55958 . A C 419.56 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.572;DP=24;Dels=0.00;ExcessHet=3.0103;FS=3.245;HaplotypeScore=4.9735;MLEAC=2;MLEAF=1.00;MQ=50.43;MQ0=2;MQRankSum=1.378;QD=17.48;ReadPosRankSum=1.115;SOR=0.663 GT:AD:DP:GQ:PL 1/1:3,21:24:7:447,7,0
CP000253.1 55959 . A G 404.56 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.709;DP=24;Dels=0.00;ExcessHet=3.0103;FS=3.245;HaplotypeScore=4.9735;MLEAC=2;MLEAF=1.00;MQ=50.43;MQ0=2;MQRankSum=1.378;QD=16.86;ReadPosRankSum=1.115;SOR=0.663 GT:AD:DP:GQ:PL 1/1:3,21:24:7:432,7,0
CP000253.1 55962 . T G 417.56 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.891;DP=24;Dels=0.00;ExcessHet=3.0103;FS=3.245;HaplotypeScore=6.7616;MLEAC=2;MLEAF=1.00;MQ=50.43;MQ0=2;MQRankSum=1.378;QD=17.40;ReadPosRankSum=1.195;SOR=0.663 GT:AD:DP:GQ:PL 1/1:3,21:24:7:445,7,0
CP000253.1 55965 . T C 419.56 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.239;DP=24;Dels=0.00;ExcessHet=3.0103;FS=3.245;HaplotypeScore=6.7616;MLEAC=2;MLEAF=1.00;MQ=50.43;MQ0=2;MQRankSum=1.378;QD=17.48;ReadPosRankSum=1.269;SOR=0.663 GT:AD:DP:GQ:PL 1/1:3,21:24:7:447,7,0
CP000253.1 55971 . C T 350.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.098;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7723;MLEAC=1;MLEAF=0.500;MQ=50.43;MQ0=2;MQRankSum=1.330;QD=14.62;ReadPosRankSum=-3.434;SOR=0.941 GT:AD:DP:GQ:PL 0/1:6,18:24:53:379,0,53
CP000253.1 55974 . A C 18.82 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.303;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7776;MLEAC=1;MLEAF=0.500;MQ=49.39;MQ0=2;MQRankSum=-0.844;QD=0.70;ReadPosRankSum=3.602;SOR=0.602 GT:AD:DP:GQ:PL 0/1:21,6:27:47:47,0,431
CP000253.1 55980 . T A 47.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.074;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8817;MLEAC=1;MLEAF=0.500;MQ=49.21;MQ0=2;MQRankSum=-1.279;QD=1.71;ReadPosRankSum=3.066;SOR=0.871 GT:AD:DP:GQ:PL 0/1:19,9:28:76:76,0,425
CP000253.1 55986 . T C 412.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.388;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9883;MLEAC=1;MLEAF=0.500;MQ=49.21;MQ0=2;MQRankSum=2.198;QD=14.74;ReadPosRankSum=2.129;SOR=0.481 GT:AD:DP:GQ:PL 0/1:5,23:28:59:441,0,59
CP000253.1 56001 . G A 315.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.923;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5427;MLEAC=1;MLEAF=0.500;MQ=48.76;MQ0=2;MQRankSum=1.554;QD=11.70;ReadPosRankSum=-2.216;SOR=0.804 GT:AD:DP:GQ:PL 0/1:8,19:27:99:344,0,123
CP000253.1 56010 . G A 516.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4732;MLEAC=2;MLEAF=1.00;MQ=49.59;MQ0=2;QD=19.88;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,26:26:39:545,39,0
CP000253.1 56013 . T A 460.18 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.802;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3669;MLEAC=2;MLEAF=1.00;MQ=49.59;MQ0=2;MQRankSum=1.520;QD=17.70;ReadPosRankSum=1.592;SOR=0.626 GT:AD:DP:GQ:PL 1/1:3,23:26:10:488,10,0
CP000253.1 56023 . T G 294.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.799;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8976;MLEAC=1;MLEAF=0.500;MQ=50.55;MQ0=2;MQRankSum=-0.052;QD=13.40;ReadPosRankSum=-2.128;SOR=0.941 GT:AD:DP:GQ:PL 0/1:6,16:25:55:323,0,55
CP000253.1 56037 . T C 21.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.793;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9806;MLEAC=1;MLEAF=0.500;MQ=52.81;MQ0=0;MQRankSum=0.570;QD=0.84;ReadPosRankSum=2.276;SOR=0.693 GT:AD:DP:GQ:PL 0/1:22,4:26:50:50,0,414
CP000253.1 56049 . A G 210.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.103;DP=33;Dels=0.00;ExcessHet=3.0103;FS=1.415;HaplotypeScore=6.5752;MLEAC=1;MLEAF=0.500;MQ=51.39;MQ0=0;MQRankSum=0.745;QD=6.39;ReadPosRankSum=-1.390;SOR=0.962 GT:AD:DP:GQ:PL 0/1:21,12:33:99:239,0,382
CP000253.1 56058 . C T 614.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7855;MLEAC=1;MLEAF=0.500;MQ=49.87;MQ0=0;QD=21.20;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:33:46:605,46,0
CP000253.1 56081 . G A 1088.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.140;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0658;MLEAC=2;MLEAF=1.00;MQ=52.30;MQ0=0;MQRankSum=-0.773;QD=21.78;ReadPosRankSum=1.742;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,49:50:78:1117,78,0
CP000253.1 56088 . T A 272.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.024;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=1;MLEAF=0.500;MQ=51.91;MQ0=0;MQRankSum=-2.810;QD=5.80;ReadPosRankSum=0.440;SOR=0.839 GT:AD:DP:GQ:PL 0/1:29,18:47:99:301,0,605
CP000253.1 56103 . A G 275.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.650;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=51.91;MQ0=0;MQRankSum=-2.810;QD=5.87;ReadPosRankSum=0.000;SOR=0.839 GT:AD:DP:GQ:PL 0/1:29,18:47:99:304,0,597
CP000253.1 56110 . T A 282.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.394;DP=46;Dels=0.00;ExcessHet=3.0103;FS=1.178;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=52.45;MQ0=0;MQRankSum=-2.574;QD=6.15;ReadPosRankSum=-0.928;SOR=0.979 GT:AD:DP:GQ:PL 0/1:29,17:46:99:311,0,613
CP000253.1 56115 . G A,T 966.77 . AC=1,1;AF=0.500,0.500;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1,1;MLEAF=0.500,0.500;MQ=52.45;MQ0=0;QD=21.02;SOR=0.874 GT:AD:DP:GQ:PL 1/2:0,29,17:46:99:995,355,306,640,0,613
CP000253.1 56122 . A G 584.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.017;DP=46;Dels=0.00;ExcessHet=3.0103;FS=1.178;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=52.45;MQ0=0;MQRankSum=2.600;QD=12.71;ReadPosRankSum=1.203;SOR=0.471 GT:AD:DP:GQ:PL 0/1:17,29:46:99:613,0,307
CP000253.1 56124 . A T 584.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.437;DP=46;Dels=0.00;ExcessHet=3.0103;FS=1.178;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=52.45;MQ0=0;MQRankSum=2.600;QD=12.71;ReadPosRankSum=1.237;SOR=0.471 GT:AD:DP:GQ:PL 0/1:17,29:46:99:613,0,306
CP000253.1 56127 . C T 583.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.703;DP=46;Dels=0.00;ExcessHet=3.0103;FS=1.178;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=52.45;MQ0=0;MQRankSum=2.600;QD=12.69;ReadPosRankSum=1.100;SOR=0.471 GT:AD:DP:GQ:PL 0/1:17,29:46:99:612,0,306
CP000253.1 56134 . G A 584.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.857;DP=46;Dels=0.00;ExcessHet=3.0103;FS=1.178;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=52.45;MQ0=0;MQRankSum=2.600;QD=12.71;ReadPosRankSum=1.535;SOR=0.471 GT:AD:DP:GQ:PL 0/1:17,29:46:99:613,0,311
CP000253.1 56142 . T C 584.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.172;DP=46;Dels=0.00;ExcessHet=3.0103;FS=1.178;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=52.45;MQ0=0;MQRankSum=2.600;QD=12.71;ReadPosRankSum=1.679;SOR=0.471 GT:AD:DP:GQ:PL 0/1:17,29:46:99:613,0,311
CP000253.1 56146 . G A 584.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.169;DP=46;Dels=0.00;ExcessHet=3.0103;FS=1.178;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=52.45;MQ0=0;MQRankSum=2.600;QD=12.71;ReadPosRankSum=1.599;SOR=0.471 GT:AD:DP:GQ:PL 0/1:17,29:46:99:613,0,304
CP000253.1 56148 . T A 587.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.087;DP=44;Dels=0.00;ExcessHet=3.0103;FS=1.238;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=52.08;MQ0=0;MQRankSum=2.989;QD=13.36;ReadPosRankSum=0.819;SOR=0.443 GT:AD:DP:GQ:PL 0/1:15,29:44:99:616,0,269
CP000253.1 56160 . G T 956.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.67;MQ0=0;QD=22.78;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:69:985,69,0
CP000253.1 56163 . T C 952.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.67;MQ0=0;QD=22.68;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:69:981,69,0
CP000253.1 56166 . A G 197.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.403;DP=42;Dels=0.00;ExcessHet=3.0103;FS=1.312;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=51.67;MQ0=0;MQRankSum=-3.426;QD=4.71;ReadPosRankSum=-0.082;SOR=1.091 GT:AD:DP:GQ:PL 0/1:29,13:42:99:226,0,619
CP000253.1 56177 . A G 956.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.67;MQ0=0;QD=22.78;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:69:985,69,0
CP000253.1 56178 . A T 199.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.629;DP=42;Dels=0.00;ExcessHet=3.0103;FS=1.312;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=51.67;MQ0=0;MQRankSum=-3.426;QD=4.76;ReadPosRankSum=0.136;SOR=1.091 GT:AD:DP:GQ:PL 0/1:29,13:42:99:228,0,619
CP000253.1 56202 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56203 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56206 . G C 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56209 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56210 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56212 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56215 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56216 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56220 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56222 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56223 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56227 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56228 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56233 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56235 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56238 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56245 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56249 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.37;MQ0=0;QD=4.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 56259 . A G 1288.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.11;MQ0=0;QD=23.87;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1317,93,0
CP000253.1 56261 . T A 1300.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.853;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.11;MQ0=0;MQRankSum=-0.212;QD=24.09;ReadPosRankSum=0.353;SOR=0.782 GT:AD:DP:GQ:PL 1/1:1,53:54:93:1329,93,0
CP000253.1 56311 . C T 14.91 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.437;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=1;MLEAF=0.500;MQ=58.68;MQ0=0;MQRankSum=-0.697;QD=0.18;ReadPosRankSum=-3.618;SOR=0.593 GT:AD:DP:GQ:PL 0/1:74,8:82:43:43,0,1553
CP000253.1 56313 . T A 1831.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=58.68;MQ0=0;QD=22.34;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1860,129,0
CP000253.1 56323 . C T 2047.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=58.90;MQ0=0;QD=23.01;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2076,144,0
CP000253.1 56325 . T C 10.20 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.941;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=1;MLEAF=0.500;MQ=58.87;MQ0=0;MQRankSum=-0.585;QD=0.12;ReadPosRankSum=-2.368;SOR=0.577 GT:AD:DP:GQ:PL 0/1:79,8:87:38:38,0,1727
CP000253.1 56326 . C T 12.99 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.268;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=1;MLEAF=0.500;MQ=58.87;MQ0=0;MQRankSum=-0.585;QD=0.15;ReadPosRankSum=-2.368;SOR=0.577 GT:AD:DP:GQ:PL 0/1:79,8:87:41:41,0,1703
CP000253.1 56328 . G A 12.99 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.993;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=1;MLEAF=0.500;MQ=58.87;MQ0=0;MQRankSum=-0.348;QD=0.15;ReadPosRankSum=-1.498;SOR=0.574 GT:AD:DP:GQ:PL 0/1:77,10:87:41:41,0,1687
CP000253.1 56335 . G A 1605.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.562;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=1;MLEAF=0.500;MQ=58.90;MQ0=0;MQRankSum=0.851;QD=17.45;ReadPosRankSum=4.380;SOR=0.702 GT:AD:DP:GQ:PL 0/1:15,77:92:99:1634,0,205
CP000253.1 56340 . T C 1593.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.950;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=1;MLEAF=0.500;MQ=59.42;MQ0=0;MQRankSum=1.299;QD=16.10;ReadPosRankSum=5.878;SOR=0.770 GT:AD:DP:GQ:PL 0/1:23,76:100:99:1622,0,372
CP000253.1 56346 . C T 559.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.618;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=1;MLEAF=0.500;MQ=59.46;MQ0=0;MQRankSum=-0.440;QD=5.18;ReadPosRankSum=-6.913;SOR=0.623 GT:AD:DP:GQ:PL 0/1:75,33:108:99:588,0,1527
CP000253.1 56347 . A T 1448.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.102;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=1;MLEAF=0.500;MQ=59.71;MQ0=0;MQRankSum=0.792;QD=14.07;ReadPosRankSum=7.070;SOR=0.749 GT:AD:DP:GQ:PL 0/1:33,70:103:99:1477,0,591
CP000253.1 56348 . C T 1488.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.463;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=1;MLEAF=0.500;MQ=59.72;MQ0=0;MQRankSum=0.728;QD=14.18;ReadPosRankSum=7.277;SOR=0.643 GT:AD:DP:GQ:PL 0/1:35,70:105:99:1517,0,658
CP000253.1 56361 . C T 1351.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.164;DP=110;Dels=0.00;ExcessHet=3.0103;FS=1.590;HaplotypeScore=10.4721;MLEAC=1;MLEAF=0.500;MQ=59.49;MQ0=0;MQRankSum=0.120;QD=12.29;ReadPosRankSum=6.627;SOR=0.509 GT:AD:DP:GQ:PL 0/1:41,69:110:99:1380,0,744
CP000253.1 56363 . T C 1419.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.987;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2328;MLEAC=1;MLEAF=0.500;MQ=59.49;MQ0=0;MQRankSum=0.539;QD=13.27;ReadPosRankSum=6.830;SOR=0.595 GT:AD:DP:GQ:PL 0/1:40,67:110:99:1448,0,733
CP000253.1 56364 . G A 1433.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.105;DP=121;Dels=0.00;ExcessHet=3.0103;FS=1.468;HaplotypeScore=13.0995;MLEAC=1;MLEAF=0.500;MQ=59.16;MQ0=0;MQRankSum=1.456;QD=11.85;ReadPosRankSum=7.593;SOR=0.517 GT:AD:DP:GQ:PL 0/1:52,69:121:99:1462,0,972
CP000253.1 56367 . T G 1470.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.566;DP=123;Dels=0.01;ExcessHet=3.0103;FS=0.692;HaplotypeScore=21.8470;MLEAC=1;MLEAF=0.500;MQ=59.18;MQ0=0;MQRankSum=1.535;QD=12.06;ReadPosRankSum=7.384;SOR=0.544 GT:AD:DP:GQ:PL 0/1:51,71:122:99:1499,0,987
CP000253.1 56382 . A T 1006.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.801;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.625;HaplotypeScore=15.0413;MLEAC=1;MLEAF=0.500;MQ=57.95;MQ0=0;MQRankSum=-0.056;QD=6.71;ReadPosRankSum=-4.065;SOR=0.727 GT:AD:DP:GQ:PL 0/1:94,56:150:99:1035,0,1899
CP000253.1 56400 . A G 1030.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.244;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8222;MLEAC=1;MLEAF=0.500;MQ=57.99;MQ0=0;MQRankSum=-0.258;QD=6.78;ReadPosRankSum=-2.912;SOR=0.708 GT:AD:DP:GQ:PL 0/1:95,57:153:99:1059,0,1892
CP000253.1 56403 . A G 1677.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.559;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0748;MLEAC=1;MLEAF=0.500;MQ=57.99;MQ0=0;MQRankSum=4.387;QD=11.04;ReadPosRankSum=4.768;SOR=0.638 GT:AD:DP:GQ:PL 0/1:68,84:153:99:1706,0,1241
CP000253.1 56404 . T A 1022.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.276;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0750;MLEAC=1;MLEAF=0.500;MQ=57.99;MQ0=0;MQRankSum=-0.517;QD=6.73;ReadPosRankSum=-2.550;SOR=0.652 GT:AD:DP:GQ:PL 0/1:94,58:153:99:1051,0,1908
CP000253.1 56418 . G A 26.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.658;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8923;MLEAC=1;MLEAF=0.500;MQ=58.04;MQ0=0;MQRankSum=-7.607;QD=0.18;ReadPosRankSum=-3.169;SOR=0.823 GT:AD:DP:GQ:PL 0/1:137,13:150:55:55,0,2859
CP000253.1 56427 . T C 1113.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.243;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7059;MLEAC=1;MLEAF=0.500;MQ=58.04;MQ0=0;MQRankSum=0.127;QD=7.47;ReadPosRankSum=-2.550;SOR=0.725 GT:AD:DP:GQ:PL 0/1:88,61:150:99:1142,0,1702
CP000253.1 56442 . C T 1235.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.038;DP=153;Dels=0.00;ExcessHet=3.0103;FS=1.277;HaplotypeScore=14.2952;MLEAC=1;MLEAF=0.500;MQ=58.03;MQ0=0;MQRankSum=1.302;QD=8.08;ReadPosRankSum=-1.443;SOR=0.692 GT:AD:DP:GQ:PL 0/1:87,66:153:99:1264,0,1771
CP000253.1 56445 . T C 1183.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.127;DP=150;Dels=0.00;ExcessHet=3.0103;FS=1.302;HaplotypeScore=28.1864;MLEAC=1;MLEAF=0.500;MQ=57.80;MQ0=0;MQRankSum=1.620;QD=7.94;ReadPosRankSum=-0.502;SOR=0.750 GT:AD:DP:GQ:PL 0/1:86,63:150:99:1212,0,1729
CP000253.1 56451 . A G 1131.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.189;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.3519;MLEAC=1;MLEAF=0.500;MQ=57.20;MQ0=0;MQRankSum=2.220;QD=7.60;ReadPosRankSum=0.428;SOR=0.734 GT:AD:DP:GQ:PL 0/1:85,64:150:99:1160,0,1679
CP000253.1 56454 . A C 1560.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.880;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.3413;MLEAC=1;MLEAF=0.500;MQ=57.18;MQ0=0;MQRankSum=-3.925;QD=10.47;ReadPosRankSum=-1.180;SOR=0.717 GT:AD:DP:GQ:PL 0/1:66,83:149:99:1589,0,1240
CP000253.1 56460 . T A 1165.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.591;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.626;HaplotypeScore=66.7024;MLEAC=1;MLEAF=0.500;MQ=57.35;MQ0=0;MQRankSum=2.832;QD=8.21;ReadPosRankSum=1.472;SOR=0.713 GT:AD:DP:GQ:PL 0/1:80,62:142:99:1194,0,1511
CP000253.1 56466 . T C 145.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.023;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.918;HaplotypeScore=42.6876;MLEAC=1;MLEAF=0.500;MQ=57.27;MQ0=0;MQRankSum=-9.350;QD=1.06;ReadPosRankSum=-2.032;SOR=0.865 GT:AD:DP:GQ:PL 0/1:118,20:138:99:174,0,2456
CP000253.1 56467 . C G 106.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.141;DP=138;Dels=0.00;ExcessHet=3.0103;FS=3.133;HaplotypeScore=42.6876;MLEAC=1;MLEAF=0.500;MQ=57.27;MQ0=0;MQRankSum=-9.288;QD=0.78;ReadPosRankSum=-1.197;SOR=1.052 GT:AD:DP:GQ:PL 0/1:115,22:138:99:135,0,2433
CP000253.1 56487 . G A 154.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.647;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.922;HaplotypeScore=8.6986;MLEAC=1;MLEAF=0.500;MQ=57.19;MQ0=0;MQRankSum=-9.495;QD=1.18;ReadPosRankSum=0.897;SOR=0.878 GT:AD:DP:GQ:PL 0/1:111,20:131:99:183,0,2327
CP000253.1 56493 . A G 163.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.817;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.926;HaplotypeScore=7.9445;MLEAC=1;MLEAF=0.500;MQ=57.10;MQ0=0;MQRankSum=-9.518;QD=1.30;ReadPosRankSum=1.775;SOR=0.862 GT:AD:DP:GQ:PL 0/1:106,20:126:99:192,0,2215
CP000253.1 56498 . T C 163.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.592;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.921;HaplotypeScore=7.9445;MLEAC=1;MLEAF=0.500;MQ=57.13;MQ0=0;MQRankSum=-9.640;QD=1.33;ReadPosRankSum=2.708;SOR=0.870 GT:AD:DP:GQ:PL 0/1:103,20:125:99:192,0,2211
CP000253.1 56500 . G A 169.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.911;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.929;HaplotypeScore=5.4324;MLEAC=1;MLEAF=0.500;MQ=57.20;MQ0=0;MQRankSum=-9.911;QD=1.40;ReadPosRankSum=2.991;SOR=0.876 GT:AD:DP:GQ:PL 0/1:101,20:121:99:198,0,2156
CP000253.1 56502 . A T 244.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.974;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.996;HaplotypeScore=5.3371;MLEAC=1;MLEAF=0.500;MQ=55.28;MQ0=0;MQRankSum=-7.459;QD=3.40;ReadPosRankSum=1.733;SOR=0.892 GT:AD:DP:GQ:PL 0/1:52,20:73:99:273,0,1118
CP000253.1 56504 . A G 224.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.415;DP=73;Dels=0.00;ExcessHet=3.0103;FS=1.002;HaplotypeScore=5.3371;MLEAC=1;MLEAF=0.500;MQ=55.28;MQ0=0;MQRankSum=-7.518;QD=3.08;ReadPosRankSum=2.082;SOR=0.863 GT:AD:DP:GQ:PL 0/1:53,20:73:99:253,0,1117
CP000253.1 56509 . C G 244.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.355;DP=73;Dels=0.00;ExcessHet=3.0103;FS=1.002;HaplotypeScore=4.4430;MLEAC=1;MLEAF=0.500;MQ=55.28;MQ0=0;MQRankSum=-7.518;QD=3.35;ReadPosRankSum=3.787;SOR=0.863 GT:AD:DP:GQ:PL 0/1:53,20:73:99:273,0,1120
CP000253.1 56523 . A G 286.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.596;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.965;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=55.41;MQ0=0;MQRankSum=-7.146;QD=3.82;ReadPosRankSum=3.920;SOR=0.844 GT:AD:DP:GQ:PL 0/1:53,22:75:99:315,0,1113
CP000253.1 56526 . T A 284.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.248;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.965;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=55.41;MQ0=0;MQRankSum=-7.146;QD=3.80;ReadPosRankSum=4.071;SOR=0.844 GT:AD:DP:GQ:PL 0/1:53,22:75:99:313,0,1073
CP000253.1 56529 . A G 286.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.154;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.965;HaplotypeScore=3.6097;MLEAC=1;MLEAF=0.500;MQ=55.41;MQ0=0;MQRankSum=-7.146;QD=3.82;ReadPosRankSum=4.310;SOR=0.844 GT:AD:DP:GQ:PL 0/1:53,22:75:99:315,0,1100
CP000253.1 56538 . T C 391.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4602;MLEAC=2;MLEAF=1.00;MQ=42.35;MQ0=0;QD=19.59;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:22:33:420,33,0
CP000253.1 56539 . C T 380.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4602;MLEAC=2;MLEAF=1.00;MQ=42.35;MQ0=0;QD=18.13;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:22:33:409,33,0
CP000253.1 56544 . A T 397.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4602;MLEAC=2;MLEAF=1.00;MQ=42.35;MQ0=0;QD=18.08;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:33:426,33,0
CP000253.1 56553 . C T 444.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.09;MQ0=0;QD=18.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:36:473,36,0
CP000253.1 56557 . C G 448.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=44.09;MQ0=0;QD=18.70;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:36:477,36,0
CP000253.1 56566 . A T 448.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=44.09;MQ0=0;QD=18.70;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:36:477,36,0
CP000253.1 56569 . G A 429.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=44.09;MQ0=0;QD=17.91;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:36:458,36,0
CP000253.1 56583 . A G 469.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.16;MQ0=0;QD=18.07;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:39:498,39,0
CP000253.1 56605 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 56606 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 56712 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 56718 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 56727 . A G 249.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.776;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=49.35;MQ0=0;MQRankSum=0.296;QD=14.69;ReadPosRankSum=-3.888;SOR=0.836 GT:AD:DP:GQ:PL 0/1:4,13:17:62:278,0,62
CP000253.1 56733 . C T 238.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.421;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=49.35;MQ0=0;MQRankSum=0.296;QD=14.05;ReadPosRankSum=-3.888;SOR=0.836 GT:AD:DP:GQ:PL 0/1:4,13:17:62:267,0,62
CP000253.1 56751 . T C 33.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.228;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=49.35;MQ0=0;MQRankSum=-0.177;QD=1.99;ReadPosRankSum=4.041;SOR=0.569 GT:AD:DP:GQ:PL 0/1:13,4:17:62:62,0,278
CP000253.1 56753 . C T 245.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.049;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=49.37;MQ0=0;MQRankSum=0.575;QD=15.36;ReadPosRankSum=-3.753;SOR=1.022 GT:AD:DP:GQ:PL 0/1:4,12:16:62:274,0,62
CP000253.1 56757 . A G 33.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.159;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=49.37;MQ0=0;MQRankSum=-0.447;QD=2.11;ReadPosRankSum=3.913;SOR=0.446 GT:AD:DP:GQ:PL 0/1:12,4:16:62:62,0,271
CP000253.1 56761 . A G 317.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.99;MQ0=0;QD=21.19;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:346,24,0
CP000253.1 56765 . A G 204.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.187;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=49.99;MQ0=0;MQRankSum=0.905;QD=13.65;ReadPosRankSum=-3.613;SOR=0.859 GT:AD:DP:GQ:PL 0/1:4,11:15:65:233,0,65
CP000253.1 56778 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.01;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 56780 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.01;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 56784 . T G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.01;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 56792 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.10;MQ0=2;QD=10.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,4:6:6:90,6,0
CP000253.1 56802 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.10;MQ0=2;QD=10.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:6:90,6,0
CP000253.1 56817 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.10;MQ0=2;QD=10.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,4:6:6:90,6,0
CP000253.1 56819 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.10;MQ0=2;QD=10.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,4:6:6:90,6,0
CP000253.1 56820 . G C 62.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.10;MQ0=2;QD=10.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,4:6:6:90,6,0
CP000253.1 56825 . G T 62.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.10;MQ0=2;QD=10.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,4:6:6:90,6,0
CP000253.1 56835 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.10;MQ0=2;QD=10.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:6:90,6,0
CP000253.1 56836 . C A 62.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.10;MQ0=2;QD=10.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:6:90,6,0
CP000253.1 56845 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.10;MQ0=2;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:6:6:90,6,0
CP000253.1 56850 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.10;MQ0=2;QD=10.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,4:6:6:90,6,0
CP000253.1 56871 . A G 51.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=45.37;MQ0=2;MQRankSum=1.834;QD=6.47;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:36:80,0,36
CP000253.1 56880 . T A 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=51.04;MQ0=0;MQRankSum=-1.383;QD=2.78;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:39:39,0,39
CP000253.1 56890 . G A 52.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.19;MQ0=0;MQRankSum=0.000;QD=8.79;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:36:81,0,36
CP000253.1 56892 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.26;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 56901 . A G 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.22;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 56910 . G A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.22;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 56913 . G A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.22;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 56919 . G A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.22;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 56956 . G A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.22;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 56961 . A C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.22;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 56964 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.22;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 57174 . T C 54.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=28.58;MQ0=1;QD=13.69;SOR=1.179 GT:AD:DP:GQ:PL 1/1:1,3:4:6:82,6,0
CP000253.1 57181 . A G 54.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=28.58;MQ0=1;QD=13.69;SOR=1.179 GT:AD:DP:GQ:PL 1/1:1,3:4:6:82,6,0
CP000253.1 57182 . C T 35.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=28.58;MQ0=1;QD=8.94;SOR=1.179 GT:AD:DP:GQ:PL 1/1:1,3:4:6:63,6,0
CP000253.1 57195 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.95;MQ0=3;QD=8.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:1,6:7:6:90,6,0
CP000253.1 57197 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.95;MQ0=3;QD=8.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:1,6:7:6:90,6,0
CP000253.1 57201 . T G 62.74 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.95;MQ0=3;QD=8.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:1,6:7:6:90,6,0
CP000253.1 57211 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.95;MQ0=3;QD=8.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,7:7:6:90,6,0
CP000253.1 57231 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.95;MQ0=3;QD=8.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,7:7:6:90,6,0
CP000253.1 57234 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.95;MQ0=3;QD=8.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:1,6:7:6:90,6,0
CP000253.1 57252 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.95;MQ0=3;QD=8.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:1,6:7:6:90,6,0
CP000253.1 57288 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=29.77;MQ0=2;QD=16.33;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:15:224,15,0
CP000253.1 57324 . T A 195.90 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=29.77;MQ0=2;QD=16.33;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:15:224,15,0
CP000253.1 57327 . A G 195.90 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=29.77;MQ0=2;QD=16.33;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:15:224,15,0
CP000253.1 57332 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=29.77;MQ0=2;QD=16.33;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:15:224,15,0
CP000253.1 57337 . G A 187.90 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=29.77;MQ0=2;QD=15.66;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:15:216,15,0
CP000253.1 57353 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=33.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 57357 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=33.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 57360 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=33.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 57414 . C A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.16;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 57416 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 57426 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 57429 . A C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 57621 . T C 104.03 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=35.94;MQ0=2;QD=11.56;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,9:9:12:132,12,0
CP000253.1 57627 . C T 186.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.493;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.9359;MLEAC=2;MLEAF=1.00;MQ=43.23;MQ0=2;MQRankSum=2.287;QD=15.57;ReadPosRankSum=-0.524;SOR=0.693 GT:AD:DP:GQ:PL 1/1:4,8:12:18:215,18,0
CP000253.1 57636 . T A 73.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.516;DP=13;Dels=0.00;ExcessHet=3.0103;FS=2.463;HaplotypeScore=5.4033;MLEAC=1;MLEAF=0.500;MQ=43.21;MQ0=2;MQRankSum=-0.572;QD=5.67;ReadPosRankSum=-2.139;SOR=1.206 GT:AD:DP:GQ:PL 0/1:5,8:13:99:102,0,112
CP000253.1 57642 . T C 120.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.654;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4669;MLEAC=1;MLEAF=0.500;MQ=45.80;MQ0=2;MQRankSum=-2.019;QD=8.05;ReadPosRankSum=2.780;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,10:15:99:149,0,106
CP000253.1 57657 . G A 252.94 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.827;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2999;MLEAC=1;MLEAF=0.500;MQ=47.69;MQ0=2;MQRankSum=2.839;QD=14.88;ReadPosRankSum=-0.509;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,12:17:14:281,0,14
CP000253.1 57666 . G A 319.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4677;MLEAC=2;MLEAF=1.00;MQ=47.69;MQ0=2;QD=18.81;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,17:17:27:348,27,0
CP000253.1 57669 . T A 117.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.012;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4677;MLEAC=1;MLEAF=0.500;MQ=47.69;MQ0=2;MQRankSum=-2.352;QD=6.93;ReadPosRankSum=0.568;SOR=0.495 GT:AD:DP:GQ:PL 0/1:7,10:17:99:146,0,148
CP000253.1 57679 . T G 71.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.122;DP=21;Dels=0.00;ExcessHet=3.0103;FS=2.017;HaplotypeScore=2.4677;MLEAC=1;MLEAF=0.500;MQ=50.27;MQ0=2;MQRankSum=-0.598;QD=3.42;ReadPosRankSum=1.442;SOR=0.868 GT:AD:DP:GQ:PL 0/1:16,5:21:99:100,0,272
CP000253.1 57696 . C T 56.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.040;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3618;MLEAC=1;MLEAF=0.500;MQ=49.09;MQ0=5;MQRankSum=-4.075;QD=2.03;ReadPosRankSum=1.442;SOR=0.593 GT:AD:DP:GQ:PL 0/1:17,11:28:85:85,0,360
CP000253.1 57705 . G A 49.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.940;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8939;MLEAC=1;MLEAF=0.500;MQ=52.31;MQ0=3;MQRankSum=-2.672;QD=1.66;ReadPosRankSum=2.774;SOR=0.481 GT:AD:DP:GQ:PL 0/1:26,4:30:78:78,0,477
CP000253.1 57724 . G A 41.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.463;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4103;MLEAC=1;MLEAF=0.500;MQ=52.85;MQ0=3;MQRankSum=-1.444;QD=1.07;ReadPosRankSum=-1.513;SOR=0.946 GT:AD:DP:GQ:PL 0/1:34,5:39:70:70,0,642
CP000253.1 57726 . C T 168.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.004;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6590;MLEAC=1;MLEAF=0.500;MQ=52.64;MQ0=3;MQRankSum=-4.529;QD=4.56;ReadPosRankSum=-0.701;SOR=0.770 GT:AD:DP:GQ:PL 0/1:23,14:37:99:197,0,476
CP000253.1 57735 . A G 244.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4220;MLEAC=1;MLEAF=0.500;MQ=53.37;MQ0=3;MQRankSum=-2.212;QD=5.97;ReadPosRankSum=-1.747;SOR=0.848 GT:AD:DP:GQ:PL 0/1:29,12:41:99:273,0,493
CP000253.1 57747 . G A 256.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.273;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9784;MLEAC=1;MLEAF=0.500;MQ=53.54;MQ0=3;MQRankSum=-3.475;QD=7.13;ReadPosRankSum=-2.542;SOR=0.748 GT:AD:DP:GQ:PL 0/1:23,13:42:99:285,0,470
CP000253.1 57751 . T C 168.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.183;DP=42;Dels=0.00;ExcessHet=3.0103;FS=1.392;HaplotypeScore=12.7356;MLEAC=1;MLEAF=0.500;MQ=53.54;MQ0=3;MQRankSum=-0.980;QD=4.02;ReadPosRankSum=-2.884;SOR=1.002 GT:AD:DP:GQ:PL 0/1:32,10:42:99:197,0,564
CP000253.1 57753 . G A 232.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.643;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7356;MLEAC=1;MLEAF=0.500;MQ=53.54;MQ0=3;MQRankSum=-2.058;QD=5.54;ReadPosRankSum=-2.584;SOR=0.684 GT:AD:DP:GQ:PL 0/1:29,13:42:99:261,0,501
CP000253.1 57762 . G A 324.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.030;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8516;MLEAC=1;MLEAF=0.500;MQ=53.70;MQ0=3;MQRankSum=-3.854;QD=7.55;ReadPosRankSum=-2.194;SOR=0.960 GT:AD:DP:GQ:PL 0/1:23,20:43:99:353,0,450
CP000253.1 57790 . G A 238.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.423;DP=41;Dels=0.00;ExcessHet=3.0103;FS=2.961;HaplotypeScore=11.3970;MLEAC=1;MLEAF=0.500;MQ=54.11;MQ0=3;MQRankSum=-3.184;QD=5.82;ReadPosRankSum=0.409;SOR=1.329 GT:AD:DP:GQ:PL 0/1:24,17:41:99:267,0,510
CP000253.1 57795 . A C 163.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.628;DP=41;Dels=0.00;ExcessHet=3.0103;FS=1.565;HaplotypeScore=14.5339;MLEAC=1;MLEAF=0.500;MQ=54.11;MQ0=3;MQRankSum=-1.211;QD=4.09;ReadPosRankSum=0.120;SOR=1.501 GT:AD:DP:GQ:PL 0/1:30,10:41:99:192,0,567
CP000253.1 57798 . T C 196.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.826;DP=41;Dels=0.00;ExcessHet=3.0103;FS=1.421;HaplotypeScore=14.5339;MLEAC=1;MLEAF=0.500;MQ=54.11;MQ0=3;MQRankSum=-1.061;QD=4.80;ReadPosRankSum=0.194;SOR=1.172 GT:AD:DP:GQ:PL 0/1:30,11:41:99:225,0,564
CP000253.1 57802 . G A 208.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.612;DP=39;Dels=0.00;ExcessHet=3.0103;FS=1.438;HaplotypeScore=13.6398;MLEAC=1;MLEAF=0.500;MQ=53.80;MQ0=3;MQRankSum=-0.920;QD=5.35;ReadPosRankSum=0.448;SOR=1.165 GT:AD:DP:GQ:PL 0/1:28,11:39:99:237,0,523
CP000253.1 57804 . C A 213.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.316;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3970;MLEAC=1;MLEAF=0.500;MQ=53.80;MQ0=3;MQRankSum=-1.198;QD=5.78;ReadPosRankSum=0.517;SOR=0.948 GT:AD:DP:GQ:PL 0/1:26,11:39:99:242,0,462
CP000253.1 57816 . G T 322.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.186;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=1;MLEAF=0.500;MQ=58.34;MQ0=0;MQRankSum=-2.620;QD=8.97;ReadPosRankSum=1.024;SOR=0.735 GT:AD:DP:GQ:PL 0/1:20,16:36:99:351,0,419
CP000253.1 57819 . T C 316.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.996;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=1;MLEAF=0.500;MQ=58.24;MQ0=0;MQRankSum=-2.492;QD=9.32;ReadPosRankSum=0.729;SOR=0.716 GT:AD:DP:GQ:PL 0/1:18,16:34:99:345,0,370
CP000253.1 57831 . A G 295.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=1;MLEAF=0.500;MQ=58.24;MQ0=0;MQRankSum=-1.576;QD=8.70;ReadPosRankSum=2.858;SOR=0.988 GT:AD:DP:GQ:PL 0/1:19,15:34:99:324,0,402
CP000253.1 57833 . A G 279.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.829;DP=33;Dels=0.00;ExcessHet=3.0103;FS=1.340;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.01;MQ0=0;MQRankSum=-2.201;QD=8.74;ReadPosRankSum=2.730;SOR=0.976 GT:AD:DP:GQ:PL 0/1:17,15:33:99:308,0,366
CP000253.1 57837 . G A 303.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.151;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.01;MQ0=0;MQRankSum=-2.264;QD=9.21;ReadPosRankSum=2.817;SOR=0.861 GT:AD:DP:GQ:PL 0/1:18,15:33:99:332,0,382
CP000253.1 57840 . C T 304.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.957;DP=34;Dels=0.00;ExcessHet=3.0103;FS=1.320;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.04;MQ0=0;MQRankSum=-2.324;QD=8.96;ReadPosRankSum=3.276;SOR=0.988 GT:AD:DP:GQ:PL 0/1:19,15:34:99:333,0,373
CP000253.1 57843 . T A 302.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.990;DP=34;Dels=0.00;ExcessHet=3.0103;FS=1.320;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.04;MQ0=0;MQRankSum=-2.324;QD=8.90;ReadPosRankSum=3.312;SOR=0.988 GT:AD:DP:GQ:PL 0/1:19,15:34:99:331,0,381
CP000253.1 57859 . T C 310.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=1;MLEAF=0.500;MQ=58.91;MQ0=0;MQRankSum=-2.070;QD=10.36;ReadPosRankSum=3.801;SOR=0.960 GT:AD:DP:GQ:PL 0/1:15,15:30:99:339,0,302
CP000253.1 57862 . A C 309.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.581;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3466;MLEAC=1;MLEAF=0.500;MQ=58.91;MQ0=0;MQRankSum=-2.070;QD=10.33;ReadPosRankSum=3.802;SOR=0.960 GT:AD:DP:GQ:PL 0/1:15,15:30:99:338,0,302
CP000253.1 57863 . T A 310.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.205;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3466;MLEAC=1;MLEAF=0.500;MQ=58.91;MQ0=0;MQRankSum=-2.070;QD=10.36;ReadPosRankSum=3.898;SOR=0.960 GT:AD:DP:GQ:PL 0/1:15,15:30:99:339,0,303
CP000253.1 57870 . A T 308.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.417;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5531;MLEAC=1;MLEAF=0.500;MQ=58.91;MQ0=0;MQRankSum=-2.070;QD=10.29;ReadPosRankSum=4.264;SOR=0.960 GT:AD:DP:GQ:PL 0/1:15,15:30:99:337,0,291
CP000253.1 57895 . C T 441.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.779;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9969;MLEAC=1;MLEAF=0.500;MQ=58.09;MQ0=0;MQRankSum=-1.167;QD=17.67;ReadPosRankSum=0.238;SOR=0.776 GT:AD:DP:GQ:PL 0/1:5,20:25:84:470,0,84
CP000253.1 57901 . C T 56.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.433;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6957;MLEAC=1;MLEAF=0.500;MQ=58.09;MQ0=0;MQRankSum=1.264;QD=2.27;ReadPosRankSum=-0.545;SOR=0.616 GT:AD:DP:GQ:PL 0/1:20,5:25:85:85,0,475
CP000253.1 57905 . A T 442.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.090;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3166;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-1.283;QD=17.03;ReadPosRankSum=1.554;SOR=1.127 GT:AD:DP:GQ:PL 0/1:6,20:26:84:471,0,84
CP000253.1 57915 . A G 442.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.581;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0893;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-1.283;QD=17.03;ReadPosRankSum=1.432;SOR=1.127 GT:AD:DP:GQ:PL 0/1:6,20:26:82:471,0,82
CP000253.1 57926 . G A 343.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.062;DP=18;Dels=0.00;ExcessHet=3.0103;FS=2.392;HaplotypeScore=2.6641;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-0.895;QD=19.10;ReadPosRankSum=-1.070;SOR=0.910 GT:AD:DP:GQ:PL 0/1:3,15:18:49:372,0,49
CP000253.1 57928 . T C 358.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=18;Dels=0.00;ExcessHet=3.0103;FS=2.527;HaplotypeScore=2.6641;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-0.895;QD=19.93;ReadPosRankSum=-1.070;SOR=0.910 GT:AD:DP:GQ:PL 0/1:3,15:18:49:387,0,49
CP000253.1 57934 . G A 423.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9998;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;QD=28.25;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:18:30:407,30,0
CP000253.1 57969 . C T 260.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.092;DP=19;Dels=0.00;ExcessHet=3.0103;FS=1.913;HaplotypeScore=2.6823;MLEAC=1;MLEAF=0.500;MQ=57.40;MQ0=0;MQRankSum=-1.394;QD=14.49;ReadPosRankSum=-0.997;SOR=1.163 GT:AD:DP:GQ:PL 0/1:7,11:19:99:289,0,133
CP000253.1 57971 . A C 256.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.129;DP=19;Dels=0.00;ExcessHet=3.0103;FS=1.871;HaplotypeScore=2.6823;MLEAC=1;MLEAF=0.500;MQ=55.70;MQ0=0;MQRankSum=-2.101;QD=13.51;ReadPosRankSum=-0.973;SOR=0.883 GT:AD:DP:GQ:PL 0/1:7,12:19:99:285,0,139
CP000253.1 57984 . T C 151.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.838;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8402;MLEAC=1;MLEAF=0.500;MQ=56.89;MQ0=0;MQRankSum=-3.200;QD=6.07;ReadPosRankSum=2.075;SOR=1.085 GT:AD:DP:GQ:PL 0/1:16,9:26:99:180,0,370
CP000253.1 57987 . T C 192.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.343;DP=26;Dels=0.00;ExcessHet=3.0103;FS=1.603;HaplotypeScore=2.8402;MLEAC=1;MLEAF=0.500;MQ=56.89;MQ0=0;MQRankSum=-3.200;QD=7.71;ReadPosRankSum=2.132;SOR=1.085 GT:AD:DP:GQ:PL 0/1:16,9:26:99:221,0,375
CP000253.1 58003 . G A 167.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.678;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=1;MLEAF=0.500;MQ=57.26;MQ0=0;MQRankSum=-3.545;QD=5.79;ReadPosRankSum=2.436;SOR=0.693 GT:AD:DP:GQ:PL 0/1:20,9:29:99:196,0,460
CP000253.1 58008 . T C 131.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.295;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=1;MLEAF=0.500;MQ=57.35;MQ0=0;MQRankSum=-2.745;QD=4.39;ReadPosRankSum=2.328;SOR=1.179 GT:AD:DP:GQ:PL 0/1:22,8:30:99:160,0,464
CP000253.1 58012 . T A 173.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.733;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5552;MLEAC=1;MLEAF=0.500;MQ=57.35;MQ0=0;MQRankSum=-3.625;QD=5.79;ReadPosRankSum=2.678;SOR=0.793 GT:AD:DP:GQ:PL 0/1:21,9:30:99:202,0,465
CP000253.1 58015 . A G 173.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.774;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3434;MLEAC=1;MLEAF=0.500;MQ=57.35;MQ0=0;MQRankSum=-3.625;QD=5.79;ReadPosRankSum=2.723;SOR=0.793 GT:AD:DP:GQ:PL 0/1:21,9:30:99:202,0,460
CP000253.1 58016 . C T 164.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.876;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5552;MLEAC=1;MLEAF=0.500;MQ=57.44;MQ0=0;MQRankSum=-3.704;QD=5.32;ReadPosRankSum=2.814;SOR=0.709 GT:AD:DP:GQ:PL 0/1:22,9:31:99:193,0,500
CP000253.1 58029 . C T 160.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.148;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0422;MLEAC=1;MLEAF=0.500;MQ=57.67;MQ0=0;MQRankSum=-4.251;QD=4.73;ReadPosRankSum=2.136;SOR=0.560 GT:AD:DP:GQ:PL 0/1:26,8:34:99:189,0,537
CP000253.1 58031 . T C 146.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.833;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1481;MLEAC=1;MLEAF=0.500;MQ=57.67;MQ0=0;MQRankSum=-3.855;QD=4.45;ReadPosRankSum=2.573;SOR=0.722 GT:AD:DP:GQ:PL 0/1:24,9:34:99:175,0,543
CP000253.1 58032 . A G 540.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.095;DP=36;Dels=0.00;ExcessHet=3.0103;FS=1.512;HaplotypeScore=7.1481;MLEAC=1;MLEAF=0.500;MQ=56.95;MQ0=0;MQRankSum=3.227;QD=15.02;ReadPosRankSum=-1.903;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,27:36:99:569,0,172
CP000253.1 58035 . T G 152.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.143;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=1;MLEAF=0.500;MQ=57.12;MQ0=0;MQRankSum=-3.239;QD=4.13;ReadPosRankSum=2.890;SOR=0.743 GT:AD:DP:GQ:PL 0/1:28,9:38:99:181,0,616
CP000253.1 58048 . G A 946.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.816;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=57.19;MQ0=0;MQRankSum=-0.399;QD=24.28;ReadPosRankSum=1.646;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,38:39:69:975,69,0
CP000253.1 58050 . T A 940.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9979;MLEAC=2;MLEAF=1.00;MQ=57.12;MQ0=0;QD=24.76;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:69:969,69,0
CP000253.1 58059 . C T 897.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8920;MLEAC=2;MLEAF=1.00;MQ=57.12;MQ0=0;QD=24.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:38:66:926,66,0
CP000253.1 58086 . G A 132.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.252;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=1;MLEAF=0.500;MQ=56.70;MQ0=2;MQRankSum=-4.322;QD=2.55;ReadPosRankSum=3.166;SOR=0.527 GT:AD:DP:GQ:PL 0/1:42,10:52:99:161,0,937
CP000253.1 58122 . T C 1434.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3262;MLEAC=2;MLEAF=1.00;MQ=57.29;MQ0=2;QD=22.77;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1463,102,0
CP000253.1 58134 . C T 1127.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.342;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0296;MLEAC=1;MLEAF=0.500;MQ=57.24;MQ0=2;MQRankSum=4.857;QD=18.19;ReadPosRankSum=-0.838;SOR=0.853 GT:AD:DP:GQ:PL 0/1:10,52:62:99:1156,0,107
CP000253.1 58135 . G C 1122.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.780;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1629;MLEAC=1;MLEAF=0.500;MQ=57.24;MQ0=2;MQRankSum=4.857;QD=18.11;ReadPosRankSum=-0.806;SOR=0.853 GT:AD:DP:GQ:PL 0/1:10,52:62:99:1151,0,138
CP000253.1 58149 . T C 1170.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.426;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4470;MLEAC=1;MLEAF=0.500;MQ=57.33;MQ0=2;MQRankSum=4.950;QD=18.29;ReadPosRankSum=-0.137;SOR=0.846 GT:AD:DP:GQ:PL 0/1:10,54:64:99:1199,0,140
CP000253.1 58158 . T A,C 1339.77 . AC=1,1;AF=0.500,0.500;AN=2;BaseQRankSum=-1.168;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7212;MLEAC=1,1;MLEAF=0.500,0.500;MQ=58.25;MQ0=0;MQRankSum=-0.471;QD=21.61;ReadPosRankSum=1.416;SOR=0.831 GT:AD:DP:GQ:PL 1/2:2,7,53:62:99:1368,1172,1196,157,0,108
CP000253.1 58161 . A G 106.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.781;DP=62;Dels=0.00;ExcessHet=3.0103;FS=1.574;HaplotypeScore=5.7208;MLEAC=1;MLEAF=0.500;MQ=58.25;MQ0=0;MQRankSum=-5.344;QD=1.72;ReadPosRankSum=0.045;SOR=0.818 GT:AD:DP:GQ:PL 0/1:55,7:62:99:135,0,1219
CP000253.1 58166 . T C 50.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.830;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4700;MLEAC=1;MLEAF=0.500;MQ=58.33;MQ0=0;MQRankSum=-5.487;QD=0.78;ReadPosRankSum=-0.159;SOR=0.803 GT:AD:DP:GQ:PL 0/1:58,7:65:79:79,0,1294
CP000253.1 58171 . G A 1626.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=58.30;MQ0=0;QD=25.42;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1655,117,0
CP000253.1 58172 . G A 1268.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.847;DP=64;Dels=0.00;ExcessHet=3.0103;FS=1.620;HaplotypeScore=5.3645;MLEAC=1;MLEAF=0.500;MQ=58.30;MQ0=0;MQRankSum=5.040;QD=19.82;ReadPosRankSum=0.122;SOR=0.782 GT:AD:DP:GQ:PL 0/1:8,56:64:99:1297,0,121
CP000253.1 58332 . C G 1227.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.153;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=1;MLEAF=0.500;MQ=59.31;MQ0=0;MQRankSum=4.802;QD=18.32;ReadPosRankSum=4.119;SOR=0.726 GT:AD:DP:GQ:PL 0/1:8,59:67:69:1256,0,69
CP000253.1 58342 . G A 30.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.237;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5601;MLEAC=1;MLEAF=0.500;MQ=59.36;MQ0=0;MQRankSum=-4.942;QD=0.43;ReadPosRankSum=-3.007;SOR=0.693 GT:AD:DP:GQ:PL 0/1:64,8:72:59:59,0,1376
CP000253.1 58344 . A T 27.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.535;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5601;MLEAC=1;MLEAF=0.500;MQ=59.38;MQ0=0;MQRankSum=-5.018;QD=0.38;ReadPosRankSum=-2.782;SOR=0.693 GT:AD:DP:GQ:PL 0/1:66,8:74:56:56,0,1432
CP000253.1 58370 . G A 17.84 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.445;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=1;MLEAF=0.500;MQ=59.42;MQ0=0;MQRankSum=-5.202;QD=0.23;ReadPosRankSum=-1.229;SOR=0.666 GT:AD:DP:GQ:PL 0/1:71,8:79:46:46,0,1572
CP000253.1 58380 . C T 17.84 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.184;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5758;MLEAC=1;MLEAF=0.500;MQ=59.39;MQ0=0;MQRankSum=-5.092;QD=0.23;ReadPosRankSum=-1.483;SOR=0.693 GT:AD:DP:GQ:PL 0/1:68,8:76:46:46,0,1528
CP000253.1 58386 . T A 26.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.408;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7876;MLEAC=1;MLEAF=0.500;MQ=59.40;MQ0=0;MQRankSum=-5.055;QD=0.36;ReadPosRankSum=-1.298;SOR=0.665 GT:AD:DP:GQ:PL 0/1:67,8:77:55:55,0,1437
CP000253.1 58404 . G A 23.79 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.330;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=1;MLEAF=0.500;MQ=59.38;MQ0=0;MQRankSum=-5.018;QD=0.32;ReadPosRankSum=1.753;SOR=0.693 GT:AD:DP:GQ:PL 0/1:66,8:74:52:52,0,1472
CP000253.1 58407 . T C 44.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.551;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6544;MLEAC=1;MLEAF=0.500;MQ=58.72;MQ0=0;MQRankSum=-5.967;QD=0.57;ReadPosRankSum=1.176;SOR=0.693 GT:AD:DP:GQ:PL 0/1:68,10:78:73:73,0,1488
CP000253.1 58416 . C T 63.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.346;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1217;MLEAC=1;MLEAF=0.500;MQ=58.71;MQ0=0;MQRankSum=-5.882;QD=0.84;ReadPosRankSum=1.363;SOR=0.636 GT:AD:DP:GQ:PL 0/1:66,10:77:92:92,0,1488
CP000253.1 58425 . A G 48.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.545;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2008;MLEAC=1;MLEAF=0.500;MQ=58.71;MQ0=0;MQRankSum=-5.882;QD=0.64;ReadPosRankSum=1.917;SOR=0.636 GT:AD:DP:GQ:PL 0/1:66,10:77:77:77,0,1524
CP000253.1 58433 . G A 60.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.086;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3346;MLEAC=1;MLEAF=0.500;MQ=58.71;MQ0=0;MQRankSum=-5.925;QD=0.79;ReadPosRankSum=2.529;SOR=0.665 GT:AD:DP:GQ:PL 0/1:67,10:77:89:89,0,1500
CP000253.1 58434 . C T 57.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.570;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3346;MLEAC=1;MLEAF=0.500;MQ=58.74;MQ0=0;MQRankSum=-6.009;QD=0.73;ReadPosRankSum=2.710;SOR=0.665 GT:AD:DP:GQ:PL 0/1:69,10:79:86:86,0,1560
CP000253.1 58447 . T A 20.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.439;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=1;MLEAF=0.500;MQ=58.47;MQ0=0;MQRankSum=-4.900;QD=0.27;ReadPosRankSum=3.249;SOR=0.847 GT:AD:DP:GQ:PL 0/1:68,9:77:49:49,0,1549
CP000253.1 58527 . C T 40.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.468;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9578;MLEAC=1;MLEAF=0.500;MQ=55.11;MQ0=2;MQRankSum=-3.526;QD=1.13;ReadPosRankSum=-2.360;SOR=0.709 GT:AD:DP:GQ:PL 0/1:28,8:36:69:69,0,666
CP000253.1 58536 . A T 51.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.262;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.9153;MLEAC=1;MLEAF=0.500;MQ=55.78;MQ0=2;MQRankSum=-2.116;QD=1.62;ReadPosRankSum=-2.472;SOR=0.430 GT:AD:DP:GQ:PL 0/1:26,6:32:80:80,0,580
CP000253.1 58540 . C G 10.20 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.314;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.9153;MLEAC=1;MLEAF=0.500;MQ=55.78;MQ0=2;MQRankSum=-2.116;QD=0.32;ReadPosRankSum=-2.085;SOR=0.430 GT:AD:DP:GQ:PL 0/1:26,6:32:38:38,0,581
CP000253.1 58560 . A T 38.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.061;DP=30;Dels=0.00;ExcessHet=3.0103;FS=5.316;HaplotypeScore=6.4527;MLEAC=1;MLEAF=0.500;MQ=56.72;MQ0=2;MQRankSum=-2.628;QD=1.29;ReadPosRankSum=2.105;SOR=1.479 GT:AD:DP:GQ:PL 0/1:24,6:30:67:67,0,577
CP000253.1 58605 . A G 12.05 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.023;DP=46;Dels=0.00;ExcessHet=3.0103;FS=4.623;HaplotypeScore=3.8929;MLEAC=1;MLEAF=0.500;MQ=58.18;MQ0=2;MQRankSum=-4.467;QD=0.27;ReadPosRankSum=2.516;SOR=1.544 GT:AD:DP:GQ:PL 0/1:40,5:46:40:40,0,916
CP000253.1 58707 . G A 1035.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=58.13;MQ0=1;QD=23.02;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1064,75,0
CP000253.1 58729 . A T 829.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.752;DP=34;Dels=0.00;ExcessHet=3.0103;FS=3.274;HaplotypeScore=32.4743;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.40;ReadPosRankSum=-1.379;SOR=0.507 GT:AD:DP:GQ:PL 1/1:1,33:34:63:858,63,0
CP000253.1 58744 . T C 1126.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:43:81:1155,81,0
CP000253.1 58746 . T C 1114.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1143,81,0
CP000253.1 58750 . A T 1141.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:84:1170,84,0
CP000253.1 58851 . G A 3534.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=1.312 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3563,253,0
CP000253.1 58854 . T C 3537.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.635;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9405;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.40;ReadPosRankSum=1.498;SOR=1.015 GT:AD:DP:GQ:PL 1/1:2,132:134:99:3566,256,0
CP000253.1 58858 . T C 3537.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7287;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=1.301 GT:AD:DP:GQ:PL 1/1:0,135:139:99:3566,259,0
CP000253.1 58879 . A G 4368.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2563;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4397,310,0
CP000253.1 58917 . C T 5079.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.800;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=0.195;SOR=0.737 GT:AD:DP:GQ:PL 1/1:1,203:204:99:5108,361,0
CP000253.1 58935 . T C 5724.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.064;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2606;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=1.664;SOR=0.698 GT:AD:DP:GQ:PL 1/1:1,226:228:99:5753,403,0
CP000253.1 58980 . C T 6059.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.2105;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=24.63;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6088,421,0
CP000253.1 59049 . A G 5813.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1707;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,229:229:99:5842,418,0
CP000253.1 59069 . T C 5755.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5175;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,231:233:99:5784,412,0
CP000253.1 59109 . A C 5977.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.630;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=0.850;SOR=0.274 GT:AD:DP:GQ:PL 1/1:2,235:237:99:6006,427,0
CP000253.1 59160 . T C 5952.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.958;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1603;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.44;ReadPosRankSum=0.926;SOR=0.248 GT:AD:DP:GQ:PL 1/1:1,233:235:99:5981,418,0
CP000253.1 59163 . C T 5903.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1603;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,233:235:99:5932,415,0
CP000253.1 59418 . T A 3788.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4954;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3817,268,0
CP000253.1 59463 . G A 3761.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9968;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3790,265,0
CP000253.1 59481 . C G 3375.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4250;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3404,238,0
CP000253.1 59562 . A G 2574.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4448;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2603,184,0
CP000253.1 59604 . C T 2177.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.946;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.03;ReadPosRankSum=1.733;SOR=0.604 GT:AD:DP:GQ:PL 1/1:1,86:88:99:2206,157,0
CP000253.1 59607 . G A 2248.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3544;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2277,160,0
CP000253.1 59623 . G A 2167.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2196,154,0
CP000253.1 59685 . T C 997.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3107;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:40:72:1026,72,0
CP000253.1 59728 . C A 863.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.014;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.68;ReadPosRankSum=1.736;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,34:35:63:892,63,0
CP000253.1 59736 . C T 840.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:60:869,60,0
CP000253.1 59742 . C A 839.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:60:868,60,0
CP000253.1 59874 . T G 1483.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1512,105,0
CP000253.1 59883 . C T 1489.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1518,105,0
CP000253.1 59922 . A G 1544.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:65:99:1573,111,0
CP000253.1 59946 . T C 1429.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.986 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1458,102,0
CP000253.1 59986 . T C 2197.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=1.116 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2226,157,0
CP000253.1 59988 . G A 2150.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2179,154,0
CP000253.1 60001 . G A 2469.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9234;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.20;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2498,178,0
CP000253.1 60018 . T A 2657.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=25.07;ReadPosRankSum=0.638;SOR=0.765 GT:AD:DP:GQ:PL 1/1:1,105:108:99:2686,190,0
CP000253.1 60036 . T C 2651.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.826;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1387;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=24.78;ReadPosRankSum=0.308;SOR=0.374 GT:AD:DP:GQ:PL 1/1:1,106:107:99:2680,190,0
CP000253.1 60040 . A G 2716.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0686;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.63;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2745,196,0
CP000253.1 60042 . T A 2742.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9632;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.63;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2771,196,0
CP000253.1 60126 . G A 2549.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2882;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=23.61;ReadPosRankSum=-1.300;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,107:110:99:2578,181,0
CP000253.1 60216 . A G 3211.76 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1397;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3240,223,0
CP000253.1 60241 . G A 3260.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8153;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3289,229,0
CP000253.1 60273 . C T 3147.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3176,220,0
CP000253.1 60369 . T C 2317.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2346,166,0
CP000253.1 60373 . C A 2321.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2350,166,0
CP000253.1 60374 . G A 2380.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2409,169,0
CP000253.1 60490 . T A 1426.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.92;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1455,102,0
CP000253.1 60548 . A G 1404.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1433,99,0
CP000253.1 60582 . A G 1405.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1434,99,0
CP000253.1 60687 . G A 1680.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1709,117,0
CP000253.1 60774 . G A 1748.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1777,123,0
CP000253.1 60786 . T C 1752.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1781,123,0
CP000253.1 60807 . G A 1838.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8754;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1867,129,0
CP000253.1 60813 . A C 1832.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.9646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1861,129,0
CP000253.1 61225 . A G 1137.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7425;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.280 GT:AD:DP:GQ:PL 1/1:0,45:45:84:1166,84,0
CP000253.1 61244 . G A 1526.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1555,111,0
CP000253.1 61533 . A T 5081.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.817 GT:AD:DP:GQ:PL 1/1:0,204:204:99:5110,358,0
CP000253.1 61642 . A G 5613.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5642,400,0
CP000253.1 61722 . A T 5184.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.932;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2211;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.42;ReadPosRankSum=1.563;SOR=0.497 GT:AD:DP:GQ:PL 1/1:1,203:204:99:5213,373,0
CP000253.1 62229 . C T 4491.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.888;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.64;ReadPosRankSum=1.714;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,189:191:99:4520,316,0
CP000253.1 62259 . G T 4459.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,184:184:99:4488,313,0
CP000253.1 62266 . A G 4504.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.972;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=1.481;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,185:187:99:4533,316,0
CP000253.1 62331 . T G 4292.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.697;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.20;ReadPosRankSum=-1.583;SOR=0.232 GT:AD:DP:GQ:PL 1/1:1,184:185:99:4321,268,0
CP000253.1 62340 . A T 4394.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.8845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,179:183:99:4423,310,0
CP000253.1 62485 . G A 2971.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.883;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.97;ReadPosRankSum=-0.266;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,123:125:99:3000,208,0
CP000253.1 62507 . A G 2991.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,123:125:99:3020,211,0
CP000253.1 62530 . T A 2792.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7259;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2821,199,0
CP000253.1 62560 . C T 2540.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2569,181,0
CP000253.1 62569 . T C 2430.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4311;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2459,172,0
CP000253.1 62587 . G A 2542.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3639;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2571,181,0
CP000253.1 62632 . A G 2454.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2370;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2483,175,0
CP000253.1 62737 . T C 2256.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,89:91:99:2285,163,0
CP000253.1 63215 . T G 2118.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9931;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2147,151,0
CP000253.1 63633 . C T 2999.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3028,214,0
CP000253.1 63925 . T C 559.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8078;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:25:42:588,42,0
CP000253.1 63987 . G A 631.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.59;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:48:660,48,0
CP000253.1 63991 . A G 548.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.44;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:42:577,42,0
CP000253.1 64053 . T A 718.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.3867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.75;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:54:747,54,0
CP000253.1 64057 . T C 685.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:51:714,51,0
CP000253.1 64062 . C T 710.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:54:739,54,0
CP000253.1 64064 . T A 713.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.55;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:54:742,54,0
CP000253.1 64069 . G A 675.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.03;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:51:704,51,0
CP000253.1 64161 . T G 714.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:51:743,51,0
CP000253.1 64183 . C T 739.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:768,54,0
CP000253.1 64188 . G T 796.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:57:825,57,0
CP000253.1 64189 . A G 798.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:57:827,57,0
CP000253.1 64201 . G A 567.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:596,42,0
CP000253.1 64203 . T C 585.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:614,42,0
CP000253.1 64206 . T G 580.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:609,42,0
CP000253.1 64209 . C T 582.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:611,42,0
CP000253.1 64214 . A C 601.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:630,45,0
CP000253.1 64258 . G T 701.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:51:730,51,0
CP000253.1 64316 . G A 1283.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:93:1312,93,0
CP000253.1 64415 . A G 2597.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5150;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=23.83;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2626,187,0
CP000253.1 64793 . A G 6201.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.6672;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,242:247:99:6230,445,0
CP000253.1 64811 . T C 6198.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.247;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.89;ReadPosRankSum=2.206;SOR=0.578 GT:AD:DP:GQ:PL 1/1:3,246:250:99:6227,442,0
CP000253.1 65006 . A T 5604.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5030;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,215:215:99:5633,400,0
CP000253.1 65064 . A G 4868.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3122;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,182:183:99:4897,349,0
CP000253.1 65110 . A C 4622.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8399;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.40;ReadPosRankSum=1.694;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,181:184:99:4651,328,0
CP000253.1 65180 . G A 4040.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9604;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4069,286,0
CP000253.1 65255 . C T 3704.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3733,262,0
CP000253.1 65258 . G T 3473.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3502,247,0
CP000253.1 65273 . G A 3810.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3839,271,0
CP000253.1 65306 . A G 3652.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1919;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3681,262,0
CP000253.1 65399 . G A 3034.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4551;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3063,220,0
CP000253.1 65413 . T A 2954.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2983,214,0
CP000253.1 65414 . A T 2984.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3013,217,0
CP000253.1 65415 . G A 2978.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,112:115:99:3007,214,0
CP000253.1 65501 . T A 4646.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3402;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,196:197:99:4675,331,0
CP000253.1 65567 . G A 4807.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.961;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.28;ReadPosRankSum=1.085;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,197:200:99:4836,340,0
CP000253.1 65651 . A G 4239.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2470;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,176:179:99:4268,298,0
CP000253.1 65672 . G A 4224.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.645;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0768;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.73;ReadPosRankSum=-1.674;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,177:178:99:4253,279,0
CP000253.1 65681 . C T 4036.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2998;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4065,283,0
CP000253.1 65684 . T C 4079.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.7120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4108,286,0
CP000253.1 65723 . T G 3334.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.84;ReadPosRankSum=0.795;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,145:146:99:3363,238,0
CP000253.1 66097 . C A 473.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.87;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:502,36,0
CP000253.1 66099 . C A 477.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.10;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:506,36,0
CP000253.1 66157 . A T 573.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:602,42,0
CP000253.1 66164 . A G 569.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:598,42,0
CP000253.1 66166 . C T 572.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:601,42,0
CP000253.1 66177 . T A 573.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:602,42,0
CP000253.1 66178 . T G 572.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:601,42,0
CP000253.1 66182 . A G 573.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:602,42,0
CP000253.1 66187 . A C 611.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:45:640,45,0
CP000253.1 66189 . C T 696.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:51:725,51,0
CP000253.1 66199 . G A 877.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:63:906,63,0
CP000253.1 66205 . G C 822.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:60:851,60,0
CP000253.1 66281 . A T 1181.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1210,84,0
CP000253.1 66333 . T C 1754.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1783,123,0
CP000253.1 66360 . A G 1711.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1740,120,0
CP000253.1 66372 . G A 1745.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:77:99:1774,123,0
CP000253.1 66392 . T C 1905.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1934,132,0
CP000253.1 66422 . G T 2249.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2278,157,0
CP000253.1 66435 . T C 2469.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.180;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.45;ReadPosRankSum=1.390;SOR=0.337 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2498,141,0
CP000253.1 66519 . G A 2901.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.012;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.18;ReadPosRankSum=-0.502;SOR=0.955 GT:AD:DP:GQ:PL 1/1:2,118:120:99:2930,169,0
CP000253.1 66554 . C A 2802.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.219;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.96;ReadPosRankSum=-1.462;SOR=0.859 GT:AD:DP:GQ:PL 1/1:2,115:117:99:2831,160,0
CP000253.1 66558 . G A 2811.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.036;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1975;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.24;ReadPosRankSum=-1.559;SOR=0.841 GT:AD:DP:GQ:PL 1/1:2,114:117:99:2840,160,0
CP000253.1 66561 . C T 2813.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.037;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9862;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=-1.595;SOR=0.862 GT:AD:DP:GQ:PL 1/1:2,113:115:99:2842,160,0
CP000253.1 66564 . A T 2753.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.454;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7126;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.95;ReadPosRankSum=-1.594;SOR=0.862 GT:AD:DP:GQ:PL 1/1:2,113:115:99:2782,157,0
CP000253.1 66621 . T G 3124.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.298;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=-1.364;SOR=0.741 GT:AD:DP:GQ:PL 1/1:2,127:129:99:3153,184,0
CP000253.1 66658 . G A 3857.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.555;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.38;ReadPosRankSum=-1.058;SOR=0.836 GT:AD:DP:GQ:PL 1/1:2,163:165:99:3886,232,0
CP000253.1 67110 . C T 4791.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9619;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.83;ReadPosRankSum=-0.952;SOR=0.749 GT:AD:DP:GQ:PL 1/1:1,192:194:99:4820,340,0
CP000253.1 67134 . A C 4929.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,198:198:99:4958,349,0
CP000253.1 67146 . T C 4302.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4331,301,0
CP000253.1 67179 . G A 3486.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3515,247,0
CP000253.1 67181 . T C 3474.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3503,247,0
CP000253.1 67184 . T C 3489.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3518,247,0
CP000253.1 67197 . A T 3468.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.828;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3399;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.89;ReadPosRankSum=0.686;SOR=0.384 GT:AD:DP:GQ:PL 1/1:1,133:134:99:3497,247,0
CP000253.1 67200 . T C 3166.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3399;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3195,226,0
CP000253.1 67206 . A T 3049.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3078,217,0
CP000253.1 67209 . A G 3119.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3148,223,0
CP000253.1 67214 . T G 2870.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.976;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.86;ReadPosRankSum=1.592;SOR=0.837 GT:AD:DP:GQ:PL 1/1:1,110:111:99:2899,205,0
CP000253.1 67215 . A T 2858.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=1.089 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2887,205,0
CP000253.1 67220 . C G 2868.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,110:111:99:2897,208,0
CP000253.1 67265 . T C 2437.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.39;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2466,178,0
CP000253.1 67278 . G T 1868.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1897,135,0
CP000253.1 67400 . T C 1613.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=1.160 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1642,120,0
CP000253.1 67428 . G A 2098.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6671;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2127,153,0
CP000253.1 67443 . T A 2074.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.824;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8172;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.30;ReadPosRankSum=0.634;SOR=0.934 GT:AD:DP:GQ:PL 1/1:1,81:82:99:2103,150,0
CP000253.1 67902 . T A 3615.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.780;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=1.300;SOR=0.361 GT:AD:DP:GQ:PL 1/1:1,151:154:99:3644,253,0
CP000253.1 67908 . A G 3587.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.768;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7589;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.41;ReadPosRankSum=-0.908;SOR=0.342 GT:AD:DP:GQ:PL 1/1:1,146:147:99:3616,256,0
CP000253.1 67920 . A C 3422.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.297;DP=142;Dels=0.00;ExcessHet=3.0103;FS=3.854;HaplotypeScore=14.8524;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.10;ReadPosRankSum=2.191;SOR=0.683 GT:AD:DP:GQ:PL 1/1:2,140:142:99:3451,220,0
CP000253.1 67934 . G A 3335.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3364,238,0
CP000253.1 67935 . A C 3271.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6214;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=1.196 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3300,235,0
CP000253.1 67941 . T C 3300.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4731;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.187 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3329,238,0
CP000253.1 67956 . G A 3283.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4993;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=1.234 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3312,235,0
CP000253.1 68084 . C T 296.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4034;MLEAC=2;MLEAF=1.00;MQ=57.74;MQ0=0;QD=24.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:13:24:325,24,0
CP000253.1 69198 . A T 804.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:57:833,57,0
CP000253.1 69260 . A G 1243.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1272,87,0
CP000253.1 69267 . T C 1369.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.028;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.22;ReadPosRankSum=-0.882;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,58:59:96:1398,96,0
CP000253.1 69272 . T G 1378.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1407,96,0
CP000253.1 69290 . G A 1410.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1439,99,0
CP000253.1 69308 . A G 1196.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1225,84,0
CP000253.1 69338 . A G 1147.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:50:81:1176,81,0
CP000253.1 69365 . A G 1200.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1229,84,0
CP000253.1 69368 . T G 1199.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1228,84,0
CP000253.1 69870 . G A 136.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:164,12,0
CP000253.1 70062 . T G 911.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:42:63:940,63,0
CP000253.1 70851 . C T 1836.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1865,126,0
CP000253.1 70871 . G A 2005.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2034,138,0
CP000253.1 70880 . T C 2264.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.20;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2293,157,0
CP000253.1 70907 . T C 2501.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2530,172,0
CP000253.1 70925 . G A 2500.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6282;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2529,172,0
CP000253.1 70937 . T A 2493.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6557;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2522,172,0
CP000253.1 71144 . C A 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 71189 . G A 132.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.01;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:160,12,0
CP000253.1 71225 . T C 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 71258 . C G 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 71269 . G T 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 71280 . A G 178.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:207,15,0
CP000253.1 71289 . G T 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 71543 . C T 585.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.70;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:614,42,0
CP000253.1 71836 . T A 1036.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:72:1065,72,0
CP000253.1 73058 . T C 715.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:54:744,54,0
CP000253.1 73211 . C T 1129.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2054;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:45:81:1158,81,0
CP000253.1 73223 . A G 1077.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1106,78,0
CP000253.1 73723 . A G 2941.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.782;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8541;MLEAC=2;MLEAF=1.00;MQ=58.49;MQ0=0;MQRankSum=-0.322;QD=26.99;ReadPosRankSum=-1.367;SOR=0.535 GT:AD:DP:GQ:PL 1/1:1,108:109:99:2970,220,0
CP000253.1 73726 . A G 2838.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4105;MLEAC=2;MLEAF=1.00;MQ=58.48;MQ0=0;QD=26.78;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,106:108:99:2867,214,0
CP000253.1 73750 . A G 3151.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=54.8498;MLEAC=2;MLEAF=1.00;MQ=56.87;MQ0=1;QD=27.41;SOR=1.469 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3180,238,0
CP000253.1 73759 . G A 3097.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.500;DP=125;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=94.0686;MLEAC=2;MLEAF=1.00;MQ=56.81;MQ0=1;MQRankSum=2.511;QD=25.60;ReadPosRankSum=1.965;SOR=1.139 GT:AD:DP:GQ:PL 1/1:5,116:122:99:3126,196,0
CP000253.1 73783 . A G 15.88 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.055;DP=132;Dels=0.02;ExcessHet=3.0103;FS=4.788;HaplotypeScore=99.8898;MLEAC=1;MLEAF=0.500;MQ=55.43;MQ0=4;MQRankSum=-0.133;QD=0.13;ReadPosRankSum=-2.552;SOR=0.494 GT:AD:DP:GQ:PL 0/1:110,17:129:44:44,0,2388
CP000253.1 73789 . T C 1827.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.016;DP=129;Dels=0.02;ExcessHet=3.0103;FS=8.714;HaplotypeScore=108.9107;MLEAC=1;MLEAF=0.500;MQ=55.11;MQ0=4;MQRankSum=1.459;QD=14.74;ReadPosRankSum=3.362;SOR=1.305 GT:AD:DP:GQ:PL 0/1:33,91:126:99:1856,0,222
CP000253.1 73792 . T G 2933.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.444;DP=129;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=101.0443;MLEAC=2;MLEAF=1.00;MQ=55.11;MQ0=4;MQRankSum=2.007;QD=23.28;ReadPosRankSum=0.151;SOR=0.422 GT:AD:DP:GQ:PL 1/1:4,122:126:99:2962,187,0
CP000253.1 73822 . A G 2914.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.1576;MLEAC=2;MLEAF=1.00;MQ=54.40;MQ0=4;QD=24.49;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,119:120:99:2943,232,0
CP000253.1 73831 . A G 1492.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.023;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.761;HaplotypeScore=60.5824;MLEAC=1;MLEAF=0.500;MQ=53.76;MQ0=4;MQRankSum=2.189;QD=13.45;ReadPosRankSum=1.247;SOR=0.790 GT:AD:DP:GQ:PL 0/1:39,72:118:99:1521,0,497
CP000253.1 73840 . T G 2010.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.293;DP=120;Dels=0.00;ExcessHet=3.0103;FS=2.859;HaplotypeScore=68.6191;MLEAC=1;MLEAF=0.500;MQ=53.25;MQ0=5;MQRankSum=-0.760;QD=16.90;ReadPosRankSum=-2.503;SOR=0.458 GT:AD:DP:GQ:PL 0/1:28,91:120:99:2039,0,204
CP000253.1 73909 . C T 1591.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.179;DP=100;Dels=0.00;ExcessHet=3.0103;FS=15.481;HaplotypeScore=33.3767;MLEAC=1;MLEAF=0.500;MQ=55.06;MQ0=4;MQRankSum=2.586;QD=15.92;ReadPosRankSum=0.575;SOR=1.820 GT:AD:DP:GQ:PL 0/1:32,68:100:99:1620,0,273
CP000253.1 73912 . G T 1495.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.172;DP=97;Dels=0.00;ExcessHet=3.0103;FS=5.889;HaplotypeScore=38.1362;MLEAC=1;MLEAF=0.500;MQ=55.39;MQ0=3;MQRankSum=1.269;QD=15.42;ReadPosRankSum=1.707;SOR=1.671 GT:AD:DP:GQ:PL 0/1:32,65:97:99:1524,0,223
CP000253.1 73916 . T C 51.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.947;DP=90;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.7271;MLEAC=1;MLEAF=0.500;MQ=55.74;MQ0=1;MQRankSum=-2.250;QD=0.60;ReadPosRankSum=-0.344;SOR=0.979 GT:AD:DP:GQ:PL 0/1:70,16:89:80:80,0,1818
CP000253.1 73917 . T C 65.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.371;DP=89;Dels=0.01;ExcessHet=3.0103;FS=3.171;HaplotypeScore=42.5834;MLEAC=1;MLEAF=0.500;MQ=55.98;MQ0=1;MQRankSum=-3.148;QD=0.76;ReadPosRankSum=-0.092;SOR=1.129 GT:AD:DP:GQ:PL 0/1:69,18:88:94:94,0,1845
CP000253.1 73933 . C T 96.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.368;DP=82;Dels=0.01;ExcessHet=3.0103;FS=1.510;HaplotypeScore=54.6467;MLEAC=1;MLEAF=0.500;MQ=57.43;MQ0=0;MQRankSum=-2.800;QD=1.19;ReadPosRankSum=-1.368;SOR=0.385 GT:AD:DP:GQ:PL 0/1:67,14:81:99:125,0,1596
CP000253.1 73940 . T C 1693.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.307;DP=81;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=56.5043;MLEAC=2;MLEAF=1.00;MQ=57.40;MQ0=0;MQRankSum=3.114;QD=21.71;ReadPosRankSum=0.375;SOR=1.298 GT:AD:DP:GQ:PL 1/1:9,69:79:41:1722,41,0
CP000253.1 73941 . T C 1889.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.803;DP=82;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=53.2304;MLEAC=2;MLEAF=1.00;MQ=57.43;MQ0=0;MQRankSum=4.354;QD=24.23;ReadPosRankSum=-0.198;SOR=1.606 GT:AD:DP:GQ:PL 1/1:8,70:80:50:1918,50,0
CP000253.1 73951 . G A 51.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.915;DP=81;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=51.5808;MLEAC=1;MLEAF=0.500;MQ=58.10;MQ0=0;MQRankSum=-2.267;QD=0.66;ReadPosRankSum=-2.272;SOR=0.651 GT:AD:DP:GQ:PL 0/1:69,10:80:80:80,0,1707
CP000253.1 73957 . C T 2174.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.782;DP=79;Dels=0.03;ExcessHet=3.0103;FS=1.821;HaplotypeScore=47.1695;MLEAC=2;MLEAF=1.00;MQ=58.05;MQ0=0;MQRankSum=2.260;QD=28.24;ReadPosRankSum=0.786;SOR=1.236 GT:AD:DP:GQ:PL 1/1:5,72:77:62:2203,62,0
CP000253.1 73963 . A G 2215.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=39.2437;MLEAC=2;MLEAF=1.00;MQ=57.97;MQ0=0;QD=30.77;SOR=1.675 GT:AD:DP:GQ:PL 1/1:0,72:74:99:2244,169,0
CP000253.1 73964 . T C 2099.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.444;DP=76;Dels=0.03;ExcessHet=3.0103;FS=14.320;HaplotypeScore=40.1378;MLEAC=2;MLEAF=1.00;MQ=57.97;MQ0=0;MQRankSum=2.822;QD=28.76;ReadPosRankSum=-0.264;SOR=1.526 GT:AD:DP:GQ:PL 1/1:3,70:74:99:2128,163,0
CP000253.1 73965 . T C 2211.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.086;DP=76;Dels=0.03;ExcessHet=3.0103;FS=9.544;HaplotypeScore=40.1708;MLEAC=2;MLEAF=1.00;MQ=57.97;MQ0=0;MQRankSum=3.728;QD=29.89;ReadPosRankSum=0.183;SOR=1.493 GT:AD:DP:GQ:PL 1/1:2,72:74:99:2240,175,0
CP000253.1 73975 . G A 2506.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.369;DP=84;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.9449;MLEAC=2;MLEAF=1.00;MQ=58.52;MQ0=0;MQRankSum=2.513;QD=30.95;ReadPosRankSum=0.305;SOR=1.700 GT:AD:DP:GQ:PL 1/1:2,79:83:99:2535,161,0
CP000253.1 73981 . C T 2514.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9011;MLEAC=2;MLEAF=1.00;MQ=58.50;MQ0=0;QD=31.05;SOR=1.581 GT:AD:DP:GQ:PL 1/1:0,81:82:99:2543,187,0
CP000253.1 73984 . G T 2602.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.581;DP=84;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0016;MLEAC=2;MLEAF=1.00;MQ=58.52;MQ0=0;MQRankSum=4.726;QD=31.36;ReadPosRankSum=-1.337;SOR=1.379 GT:AD:DP:GQ:PL 1/1:2,81:83:99:2631,196,0
CP000253.1 73987 . A G 2507.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9419;MLEAC=2;MLEAF=1.00;MQ=58.90;MQ0=0;QD=30.21;SOR=1.638 GT:AD:DP:GQ:PL 1/1:0,83:84:99:2536,190,0
CP000253.1 74185 . A T 3511.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.250;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.9467;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.45;ReadPosRankSum=-1.488;SOR=0.111 GT:AD:DP:GQ:PL 1/1:2,136:139:99:3540,234,0
CP000253.1 74247 . G A 3447.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.5006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.12;ReadPosRankSum=1.654;SOR=0.497 GT:AD:DP:GQ:PL 1/1:1,131:137:99:3476,256,0
CP000253.1 74566 . G A 3895.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.237;DP=158;Dels=0.00;ExcessHet=3.0103;FS=3.036;HaplotypeScore=38.4499;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.97;ReadPosRankSum=0.748;SOR=0.111 GT:AD:DP:GQ:PL 1/1:2,154:158:99:3924,252,0
CP000253.1 74797 . G A 3240.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3269,232,0
CP000253.1 74809 . A G 3101.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8913;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=1.198 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3130,220,0
CP000253.1 74830 . G C 2434.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.679;DP=95;Dels=0.00;ExcessHet=3.0103;FS=4.095;HaplotypeScore=4.2548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.63;ReadPosRankSum=0.584;SOR=1.027 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2463,176,0
CP000253.1 75072 . G T 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 76459 . G T 476.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.49;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:36:505,36,0
CP000253.1 77077 . G A 6440.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.711;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.0469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=-1.181;SOR=0.502 GT:AD:DP:GQ:PL 1/1:1,247:249:99:6469,467,0
CP000253.1 77172 . T C 6234.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,244:244:99:6263,451,0
CP000253.1 78110 . T C 2316.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4302;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2345,166,0
CP000253.1 78124 . C T 2381.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2410,172,0
CP000253.1 78137 . A G 1982.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2011,144,0
CP000253.1 78140 . C A 1921.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6002;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.07;ReadPosRankSum=-0.513;SOR=0.499 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1950,141,0
CP000253.1 78143 . C T 1862.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1891,135,0
CP000253.1 80272 . C A 4598.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0344;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4627,325,0
CP000253.1 80571 . T C 2718.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.41;ReadPosRankSum=1.668;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,106:107:99:2747,196,0
CP000253.1 81017 . C T 5644.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.0900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=1.158 GT:AD:DP:GQ:PL 1/1:0,221:225:99:5673,406,0
CP000253.1 81119 . A T 6308.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,246:248:99:6337,451,0
CP000253.1 81164 . A T 6527.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.3515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,247:249:99:6556,470,0
CP000253.1 81222 . G A 6742.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.7665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.30;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,247:248:99:6771,494,0
CP000253.1 81563 . T A 6057.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1708;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,242:243:99:6086,430,0
CP000253.1 81581 . A G 5875.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0363;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,238:240:99:5904,424,0
CP000253.1 81626 . G A 5718.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0079;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,230:231:99:5747,406,0
CP000253.1 82485 . A C 6526.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.916;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2164;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.32;ReadPosRankSum=-1.146;SOR=0.367 GT:AD:DP:GQ:PL 1/1:1,247:249:99:6555,464,0
CP000253.1 83750 . G C 5711.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.9185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,222:225:99:5740,412,0
CP000253.1 85110 . A G 4074.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.0144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.55;ReadPosRankSum=0.771;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,172:175:99:4103,292,0
CP000253.1 85511 . C T 1801.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2416;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1830,129,0
CP000253.1 85593 . C T 1957.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:79:99:1986,141,0
CP000253.1 85617 . C T 2596.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3374;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2625,187,0
CP000253.1 85626 . G A 2635.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2664,187,0
CP000253.1 85881 . G C 5199.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,214:217:99:5228,367,0
CP000253.1 85891 . T G 5103.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.907;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.52;ReadPosRankSum=1.182;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,216:217:99:5132,358,0
CP000253.1 85948 . A G 5111.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3452;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,211:212:99:5140,361,0
CP000253.1 85975 . C T 4749.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6545;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4778,334,0
CP000253.1 86193 . C T 3496.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3525,250,0
CP000253.1 86241 . G A 4718.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1171;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,193:194:99:4747,331,0
CP000253.1 86446 . C T 3926.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0439;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,167:167:99:3955,274,0
CP000253.1 86506 . G A 3470.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0868;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3499,244,0
CP000253.1 86512 . C T 3362.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3391,238,0
CP000253.1 86733 . T C 2618.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.745;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.42;ReadPosRankSum=-0.892;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,102:103:99:2647,190,0
CP000253.1 86782 . C T 3084.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1118;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3113,220,0
CP000253.1 86812 . G A 4778.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=1.050 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4807,337,0
CP000253.1 87112 . A G 5604.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.5553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5633,403,0
CP000253.1 87620 . G T 4528.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9732;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4557,319,0
CP000253.1 87637 . T G 4492.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7325;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.55;ReadPosRankSum=0.511;SOR=0.292 GT:AD:DP:GQ:PL 1/1:1,182:184:99:4521,316,0
CP000253.1 87811 . T C 4879.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.4029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.65;ReadPosRankSum=-1.173;SOR=0.312 GT:AD:DP:GQ:PL 1/1:1,197:199:99:4908,346,0
CP000253.1 87850 . T A 4529.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4558,322,0
CP000253.1 88025 . G C 4524.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8112;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4553,328,0
CP000253.1 88029 . T G 4379.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4408,316,0
CP000253.1 88030 . G A 4586.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8669;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4615,331,0
CP000253.1 88050 . G A 5568.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,212:212:99:5597,400,0
CP000253.1 88054 . C T 5439.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,209:209:99:5468,391,0
CP000253.1 88472 . G A 4513.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.4952;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.94;ReadPosRankSum=1.434;SOR=0.391 GT:AD:DP:GQ:PL 1/1:1,173:174:99:4542,325,0
CP000253.1 88706 . A T 4195.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.447;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4047;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.83;ReadPosRankSum=-1.171;SOR=0.779 GT:AD:DP:GQ:PL 1/1:2,167:171:99:4224,304,0
CP000253.1 88823 . A G 4454.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.878;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.67;ReadPosRankSum=1.248;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,160:161:99:4483,328,0
CP000253.1 88991 . A T 5635.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.944;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3297;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.94;ReadPosRankSum=-0.981;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,225:227:99:5664,397,0
CP000253.1 89163 . A C 6406.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.781;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.83;ReadPosRankSum=1.097;SOR=0.292 GT:AD:DP:GQ:PL 1/1:1,247:248:99:6435,461,0
CP000253.1 89518 . C A 4481.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4510,325,0
CP000253.1 89520 . C T 4486.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6470;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4515,322,0
CP000253.1 89530 . G T 4766.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4795,343,0
CP000253.1 89545 . A C 4741.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.121;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.7980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=0.471;SOR=0.416 GT:AD:DP:GQ:PL 1/1:3,185:189:99:4770,340,0
CP000253.1 89626 . G A 5156.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,193:193:99:5185,373,0
CP000253.1 89627 . G T 5130.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.884;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.58;ReadPosRankSum=-0.054;SOR=0.344 GT:AD:DP:GQ:PL 1/1:1,192:193:99:5159,370,0
CP000253.1 89709 . A G 5120.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1721;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,191:192:99:5149,370,0
CP000253.1 89719 . A G 5137.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,190:191:99:5166,370,0
CP000253.1 89738 . C A 4834.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.47;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4863,346,0
CP000253.1 89739 . G A 4741.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=176;Dels=0.00;ExcessHet=3.0103;FS=3.111;HaplotypeScore=9.4293;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.25;ReadPosRankSum=-1.115;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,173:176:99:4770,322,0
CP000253.1 89848 . C T 4747.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.777;DP=192;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9550;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.99;ReadPosRankSum=0.201;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,189:191:99:4776,340,0
CP000253.1 89860 . A G 4482.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4511,319,0
CP000253.1 89881 . A T 4123.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.828;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1557;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.55;ReadPosRankSum=1.723;SOR=0.358 GT:AD:DP:GQ:PL 1/1:1,167:169:99:4152,295,0
CP000253.1 89926 . A G 4273.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,171:172:99:4302,304,0
CP000253.1 89944 . C A 4177.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,165:166:99:4206,298,0
CP000253.1 89953 . C T 4435.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4464,313,0
CP000253.1 90178 . A G 2941.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2970,214,0
CP000253.1 90568 . A G 5743.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.795;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3800;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.082;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,231:232:99:5772,403,0
CP000253.1 90604 . A G 5812.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6377;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,233:236:99:5841,406,0
CP000253.1 90889 . C T 4359.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.878;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9382;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.63;ReadPosRankSum=0.538;SOR=0.358 GT:AD:DP:GQ:PL 1/1:1,176:177:99:4388,304,0
CP000253.1 91141 . T A 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 91598 . T A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 91639 . A T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 91916 . C T 1078.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:78:1107,78,0
CP000253.1 92046 . C T 2629.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4439;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2658,184,0
CP000253.1 92210 . T G 2244.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2273,157,0
CP000253.1 92224 . A G 2124.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2153,150,0
CP000253.1 93242 . C G 1790.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7883;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1819,129,0
CP000253.1 93245 . C T 1617.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8937;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1646,114,0
CP000253.1 93248 . A G 1673.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9996;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1702,120,0
CP000253.1 93249 . T C 1699.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9996;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1728,123,0
CP000253.1 93319 . G T 1799.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1828,126,0
CP000253.1 93355 . G A 1704.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1733,120,0
CP000253.1 93399 . T C 1358.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1387,96,0
CP000253.1 93910 . A G 698.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:51:727,51,0
CP000253.1 94058 . T C 2435.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6401;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.35;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2464,172,0
CP000253.1 94145 . G T 3493.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3522,241,0
CP000253.1 94608 . C T 1038.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:75:1067,75,0
CP000253.1 94609 . A G 1024.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:75:1053,75,0
CP000253.1 94610 . A C 1033.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:41:75:1062,75,0
CP000253.1 94614 . A C 1120.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1149,81,0
CP000253.1 94630 . A G 1112.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.665;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.18;ReadPosRankSum=-1.377;SOR=0.320 GT:AD:DP:GQ:PL 1/1:1,47:48:81:1141,81,0
CP000253.1 94663 . A G 834.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:60:863,60,0
CP000253.1 94665 . T A 857.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:63:886,63,0
CP000253.1 94671 . C T 865.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:63:894,63,0
CP000253.1 94674 . T C 745.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.31;ReadPosRankSum=-0.762;SOR=0.379 GT:AD:DP:GQ:PL 1/1:1,31:32:54:774,54,0
CP000253.1 94692 . T A 996.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,40:40:72:1025,72,0
CP000253.1 94695 . A T 997.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,40:40:72:1026,72,0
CP000253.1 94705 . G T 1032.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.275;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.97;ReadPosRankSum=2.900;SOR=0.902 GT:AD:DP:GQ:PL 1/1:3,44:47:36:1061,36,0
CP000253.1 94707 . T C 1031.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.815;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.95;ReadPosRankSum=2.403;SOR=1.038 GT:AD:DP:GQ:PL 1/1:2,45:47:36:1060,36,0
CP000253.1 94818 . C T 1800.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1829,126,0
CP000253.1 94836 . C T 1814.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1843,126,0
CP000253.1 95502 . A C 2042.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2071,144,0
CP000253.1 95577 . A C 2456.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.804;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.62;ReadPosRankSum=1.066;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,103:104:99:2485,172,0
CP000253.1 95660 . A G 2370.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1498;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:100:99:2399,172,0
CP000253.1 95745 . A G 2142.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2171,154,0
CP000253.1 95759 . A G 1851.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1880,132,0
CP000253.1 95811 . T C 1123.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5266;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1152,84,0
CP000253.1 95835 . C T 1126.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1155,81,0
CP000253.1 95836 . T G 1605.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.49;ReadPosRankSum=-0.280;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,62:63:99:1634,117,0
CP000253.1 97268 . C T 830.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:60:859,60,0
CP000253.1 97348 . T G 842.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:60:871,60,0
CP000253.1 97448 . C T 831.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:60:860,60,0
CP000253.1 98005 . C T 2120.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.86;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2149,144,0
CP000253.1 98029 . A T 2014.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.66;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2043,138,0
CP000253.1 98497 . T C 2590.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7969;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2619,178,0
CP000253.1 98878 . A G 532.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:561,39,0
CP000253.1 98881 . G A 514.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:543,39,0
CP000253.1 98884 . A G 535.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:564,39,0
CP000253.1 98887 . C T 517.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:546,39,0
CP000253.1 98888 . C T 527.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:556,39,0
CP000253.1 98900 . A C 674.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:48:703,48,0
CP000253.1 98903 . A G 753.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:54:782,54,0
CP000253.1 98935 . T G 1021.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1050,72,0
CP000253.1 98944 . G A 979.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.77;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:69:1008,69,0
CP000253.1 98963 . T A 1137.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:81:1166,81,0
CP000253.1 98968 . G A 1149.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:81:1178,81,0
CP000253.1 98971 . C T 1069.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.83;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:50:75:1098,75,0
CP000253.1 98984 . A G 1167.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1196,81,0
CP000253.1 99049 . T C 1295.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:90:1324,90,0
CP000253.1 99224 . C T 387.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:416,30,0
CP000253.1 99231 . T C 358.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:387,30,0
CP000253.1 99247 . A T 168.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:197,15,0
CP000253.1 99895 . C A 3950.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=1.026 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3979,280,0
CP000253.1 100039 . C T 1619.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.234 GT:AD:DP:GQ:PL 1/1:0,62:63:99:1648,117,0
CP000253.1 100117 . C T 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 100195 . A C 176.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.48;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:205,15,0
CP000253.1 100248 . C T 223.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:252,18,0
CP000253.1 100261 . A G 178.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:15:207,15,0
CP000253.1 100272 . T C 117.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:145,12,0
CP000253.1 100366 . A T 176.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:205,15,0
CP000253.1 100372 . T C 147.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.534;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.38;ReadPosRankSum=-0.887;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,7:8:12:175,12,0
CP000253.1 100407 . G A 354.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:383,27,0
CP000253.1 100448 . C A 877.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:63:906,63,0
CP000253.1 100544 . A G 1833.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2923;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1862,132,0
CP000253.1 100560 . T C 1852.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1881,132,0
CP000253.1 100595 . T C 2017.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2046,144,0
CP000253.1 100656 . G A 2428.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4906;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2457,172,0
CP000253.1 100924 . G A 6078.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.494;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.51;ReadPosRankSum=0.267;SOR=0.152 GT:AD:DP:GQ:PL 1/1:2,246:250:99:6107,436,0
CP000253.1 100962 . C A 6066.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.954;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.97;ReadPosRankSum=1.344;SOR=0.941 GT:AD:DP:GQ:PL 1/1:2,241:243:99:6095,427,0
CP000253.1 100965 . G A 6051.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.939 GT:AD:DP:GQ:PL 1/1:0,243:244:99:6080,424,0
CP000253.1 101533 . T C 3954.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.006;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1641;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.13;ReadPosRankSum=-1.317;SOR=0.310 GT:AD:DP:GQ:PL 1/1:1,170:171:99:3983,274,0
CP000253.1 102167 . A G 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 102276 . C A 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 102313 . G A 512.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2394;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,19:20:39:541,39,0
CP000253.1 103996 . C T 5401.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,243:243:99:5430,370,0
CP000253.1 104396 . G T 516.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:39:545,39,0
CP000253.1 104630 . A G 2715.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2984;MLEAC=2;MLEAF=1.00;MQ=59.48;MQ0=0;QD=25.62;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2744,193,0
CP000253.1 104830 . A T 300.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.805;DP=195;Dels=0.00;ExcessHet=3.0103;FS=2.612;HaplotypeScore=28.7267;MLEAC=1;MLEAF=0.500;MQ=55.56;MQ0=4;MQRankSum=-8.216;QD=1.54;ReadPosRankSum=-7.424;SOR=0.849 GT:AD:DP:GQ:PL 0/1:166,29:195:99:329,0,3555
CP000253.1 104851 . C A 22.79 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.546;DP=84;Dels=0.00;ExcessHet=3.0103;FS=6.222;HaplotypeScore=8.6732;MLEAC=1;MLEAF=0.500;MQ=55.72;MQ0=2;MQRankSum=-3.729;QD=0.27;ReadPosRankSum=-2.772;SOR=1.802 GT:AD:DP:GQ:PL 0/1:75,8:84:51:51,0,2042
CP000253.1 105128 . T C 1773.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6468;MLEAC=2;MLEAF=1.00;MQ=49.04;MQ0=15;QD=20.87;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,85:85:99:1802,129,0
CP000253.1 105181 . T A 2108.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=24.81;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2137,150,0
CP000253.1 105854 . T A 6394.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=44.3418;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,245:247:99:6423,454,0
CP000253.1 106478 . T C 1632.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4657;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1661,117,0
CP000253.1 106852 . G A 6315.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,245:248:99:6344,451,0
CP000253.1 106981 . T C 5764.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5793,412,0
CP000253.1 106989 . G A 5807.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,222:223:99:5836,415,0
CP000253.1 107013 . G A 6103.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.65;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,229:230:99:6132,439,0
CP000253.1 107131 . A G 4571.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.05;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,169:170:99:4600,328,0
CP000253.1 107487 . A T 2241.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.68;SOR=1.124 GT:AD:DP:GQ:PL 1/1:0,81:86:99:2270,166,0
CP000253.1 107678 . G A 1502.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2559;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1531,108,0
CP000253.1 108000 . T C 5374.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,228:228:99:5403,373,0
CP000253.1 108349 . A T 4336.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7841;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,182:184:99:4365,304,0
CP000253.1 108397 . A G 4013.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.793;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5249;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.34;ReadPosRankSum=1.048;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,171:173:99:4042,280,0
CP000253.1 108514 . C T 4348.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4377,304,0
CP000253.1 108694 . T G 3768.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.781;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.55;ReadPosRankSum=-0.065;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,159:162:99:3797,268,0
CP000253.1 108700 . A G 3767.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5409;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,162:162:99:3796,265,0
CP000253.1 109036 . A T 642.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.95;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:48:671,48,0
CP000253.1 109267 . A G 3302.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0366;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.62;ReadPosRankSum=1.308;SOR=0.333 GT:AD:DP:GQ:PL 1/1:1,145:146:99:3331,232,0
CP000253.1 109678 . G A 1628.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3604;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:71:99:1657,114,0
CP000253.1 109831 . C T 1427.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1456,102,0
CP000253.1 109876 . T C 1240.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1269,87,0
CP000253.1 109912 . A T 1056.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:75:1085,75,0
CP000253.1 109915 . G T 1017.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2560;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1046,72,0
CP000253.1 110048 . C T 223.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:252,18,0
CP000253.1 110147 . T G 91.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:119,9,0
CP000253.1 110212 . T C 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 110637 . A C 5670.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.458;DP=231;Dels=0.00;ExcessHet=3.0103;FS=3.424;HaplotypeScore=34.6882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.55;ReadPosRankSum=1.249;SOR=0.537 GT:AD:DP:GQ:PL 1/1:2,229:231:99:5699,403,0
CP000253.1 110790 . T C 6174.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,247:249:99:6203,448,0
CP000253.1 111069 . G T 4943.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.072;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8237;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=-0.298;SOR=0.560 GT:AD:DP:GQ:PL 1/1:3,193:200:99:4972,361,0
CP000253.1 111278 . A G 3197.84 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3226,226,0
CP000253.1 111304 . A G 3334.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.036;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0382;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.46;ReadPosRankSum=-0.160;SOR=0.740 GT:AD:DP:GQ:PL 1/1:2,129:131:99:3363,212,0
CP000253.1 111306 . C A 3501.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.73;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3530,256,0
CP000253.1 111417 . T C 2791.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.64;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,101:104:99:2820,205,0
CP000253.1 111450 . C T 2753.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.811;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7824;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.59;ReadPosRankSum=0.882;SOR=0.367 GT:AD:DP:GQ:PL 1/1:1,111:113:99:2782,199,0
CP000253.1 111462 . A G 2671.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4915;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2700,196,0
CP000253.1 111495 . A G 2834.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2863,208,0
CP000253.1 111512 . A T 3151.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.536;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8325;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.82;ReadPosRankSum=0.397;SOR=0.130 GT:AD:DP:GQ:PL 1/1:2,125:127:99:3180,226,0
CP000253.1 111517 . G A 3204.83 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1393;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3234,229,0
CP000253.1 111520 . A T 2984.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.591;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8540;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.88;ReadPosRankSum=1.151;SOR=0.279 GT:AD:DP:GQ:PL 1/1:1,124:127:99:3013,214,0
CP000253.1 111565 . A G 3673.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3702,259,0
CP000253.1 111737 . T C 2613.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8246;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2642,187,0
CP000253.1 111738 . C T 2668.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2697,190,0
CP000253.1 111748 . G A 2354.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=1.167 GT:AD:DP:GQ:PL 1/1:0,95:96:99:2383,172,0
CP000253.1 111917 . T C 2242.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2271,163,0
CP000253.1 112135 . G A 6093.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6122,430,0
CP000253.1 112187 . A G 5625.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.771;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1334;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.54;ReadPosRankSum=1.732;SOR=0.304 GT:AD:DP:GQ:PL 1/1:1,238:241:99:5654,397,0
CP000253.1 112244 . A T 5275.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.8742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5304,373,0
CP000253.1 112281 . A C 5211.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.498;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.5411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.69;ReadPosRankSum=0.690;SOR=0.253 GT:AD:DP:GQ:PL 1/1:4,216:220:99:5240,373,0
CP000253.1 112307 . T G 5396.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.851;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2804;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.70;ReadPosRankSum=0.379;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,209:210:99:5425,382,0
CP000253.1 112399 . T C 6401.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1166;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6430,457,0
CP000253.1 112410 . T C 6296.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,244:244:99:6325,454,0
CP000253.1 112486 . G A 6179.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.6789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,244:246:99:6208,442,0
CP000253.1 112604 . G A 5430.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,215:217:99:5459,385,0
CP000253.1 112657 . G A 5174.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8105;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.53;ReadPosRankSum=0.147;SOR=0.342 GT:AD:DP:GQ:PL 1/1:1,187:189:99:5203,376,0
CP000253.1 112661 . A T 4899.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.1109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.92;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,182:188:99:4928,352,0
CP000253.1 112689 . C G 5173.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.67;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,187:188:99:5202,376,0
CP000253.1 112871 . A T 4320.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4349,304,0
CP000253.1 113079 . A C 3191.82 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.707;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8175;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.13;ReadPosRankSum=-1.515;SOR=0.365 GT:AD:DP:GQ:PL 1/1:1,126:127:99:3220,229,0
CP000253.1 113093 . T A 3109.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9419;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=1.123 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3138,223,0
CP000253.1 113116 . A G 2771.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3868;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=1.279 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2800,202,0
CP000253.1 113279 . A T 990.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1019,72,0
CP000253.1 113302 . A T 888.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.022;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.79;ReadPosRankSum=-0.756;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,38:39:63:917,63,0
CP000253.1 113309 . C T 919.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:66:948,66,0
CP000253.1 113321 . A G 966.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7172;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:40:69:995,69,0
CP000253.1 113387 . C T 795.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:57:824,57,0
CP000253.1 113434 . T A 671.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:30:48:700,48,0
CP000253.1 113481 . G C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 113570 . T A 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 113608 . T C 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 113727 . C A 274.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:303,21,0
CP000253.1 113761 . G T 228.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:257,18,0
CP000253.1 116233 . T G 266.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:295,21,0
CP000253.1 116315 . T A 47.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:75,6,0
CP000253.1 117836 . C G 6603.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3937;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6632,479,0
CP000253.1 118075 . A G 5615.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.881;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.00;ReadPosRankSum=1.612;SOR=0.419 GT:AD:DP:GQ:PL 1/1:1,215:217:99:5644,403,0
CP000253.1 118094 . A T 5484.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.554;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.50;ReadPosRankSum=1.417;SOR=0.431 GT:AD:DP:GQ:PL 1/1:4,203:209:99:5513,397,0
CP000253.1 118175 . G A 5155.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.922;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1998;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.57;ReadPosRankSum=0.705;SOR=0.313 GT:AD:DP:GQ:PL 1/1:1,186:188:99:5184,373,0
CP000253.1 118571 . C T 5552.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.70;ReadPosRankSum=-1.641;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,207:209:99:5581,400,0
CP000253.1 118733 . G A 5269.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2232;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,201:201:99:5298,379,0
CP000253.1 118910 . T G 6004.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,246:250:99:6033,427,0
CP000253.1 119027 . G A 5721.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8511;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,237:238:99:5750,400,0
CP000253.1 119167 . C A 513.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:39:542,39,0
CP000253.1 119228 . A T 475.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:36:504,36,0
CP000253.1 119329 . A G 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 119378 . A G 131.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:159,12,0
CP000253.1 119381 . A T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 119383 . G T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 119387 . A T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 119419 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 119641 . T C 402.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:30:431,30,0
CP000253.1 119683 . G A 858.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.70;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,31:31:63:887,63,0
CP000253.1 121154 . A C 1539.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.902;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.64;ReadPosRankSum=0.485;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,67:68:99:1568,108,0
CP000253.1 122404 . C T 3775.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.851;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2902;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.60;ReadPosRankSum=-1.191;SOR=0.283 GT:AD:DP:GQ:PL 1/1:1,159:163:99:3804,265,0
CP000253.1 122410 . T G 3928.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,163:163:99:3957,277,0
CP000253.1 122793 . G A 3013.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9473;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.109 GT:AD:DP:GQ:PL 1/1:0,112:113:99:3042,220,0
CP000253.1 123529 . A G 883.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:34:66:912,66,0
CP000253.1 123862 . G T 4210.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.756;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9642;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.06;ReadPosRankSum=-1.416;SOR=0.320 GT:AD:DP:GQ:PL 1/1:1,174:175:99:4239,295,0
CP000253.1 124565 . T A 3013.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,123:124:99:3042,211,0
CP000253.1 124650 . G A 3476.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9339;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.87;ReadPosRankSum=0.380;SOR=0.353 GT:AD:DP:GQ:PL 1/1:4,148:152:99:3505,205,0
CP000253.1 125372 . T C 4856.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,209:211:99:4885,340,0
CP000253.1 125462 . T C 3917.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.026;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4711;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.05;ReadPosRankSum=-0.561;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,169:172:99:3946,274,0
CP000253.1 125474 . C T 3747.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.31;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,168:168:99:3776,259,0
CP000253.1 125861 . T C 4094.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6207;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4123,289,0
CP000253.1 126059 . G A 4609.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.983;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3251;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.13;ReadPosRankSum=1.733;SOR=0.463 GT:AD:DP:GQ:PL 1/1:1,190:191:99:4638,322,0
CP000253.1 126074 . T G 4201.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.397;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.87;ReadPosRankSum=-1.445;SOR=0.813 GT:AD:DP:GQ:PL 1/1:2,174:176:99:4230,295,0
CP000253.1 127153 . T A 813.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:57:842,57,0
CP000253.1 127234 . T G 711.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.882;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.24;ReadPosRankSum=-1.521;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,31:32:51:740,51,0
CP000253.1 127294 . A G 683.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.37;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:48:712,48,0
CP000253.1 127458 . G A 365.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7719;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:394,27,0
CP000253.1 127504 . A G 532.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:561,39,0
CP000253.1 127559 . A C 517.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:546,39,0
CP000253.1 127630 . A T 533.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:562,39,0
CP000253.1 127958 . T C 1825.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1854,126,0
CP000253.1 128103 . C T 2143.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2172,150,0
CP000253.1 128181 . G A 1259.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,49:49:90:1288,90,0
CP000253.1 128195 . A T 916.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:66:945,66,0
CP000253.1 128325 . C T 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 128450 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 128459 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 128493 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 128664 . C G 315.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:344,24,0
CP000253.1 128884 . G A 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 129033 . T G 402.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:431,30,0
CP000253.1 129177 . C T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 129361 . T C 280.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:21:309,21,0
CP000253.1 129660 . C T 620.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:649,45,0
CP000253.1 129778 . C T 588.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:617,42,0
CP000253.1 129856 . G A 172.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.29;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:201,15,0
CP000253.1 129903 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 129904 . A G 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 129919 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 129981 . T C 45.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:73,6,0
CP000253.1 130140 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 130255 . A C 508.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:537,36,0
CP000253.1 130309 . T C 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 130405 . A G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 130453 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 130490 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 130504 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 130541 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 131047 . T A 910.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,37:37:69:939,69,0
CP000253.1 131618 . T C 3115.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3144,223,0
CP000253.1 131806 . G T 3004.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5566;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3033,214,0
CP000253.1 131827 . T C 2974.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,116:118:99:3003,214,0
CP000253.1 131843 . G C 2908.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7180;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,115:116:99:2937,208,0
CP000253.1 132512 . C T 2809.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,121:123:99:2838,199,0
CP000253.1 132862 . G T 4756.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4785,337,0
CP000253.1 132952 . T G 4566.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,201:201:99:4595,319,0
CP000253.1 132971 . G A 4491.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,191:193:99:4520,313,0
CP000253.1 133048 . A G 4311.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4340,301,0
CP000253.1 133151 . T C 3590.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4721;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=1.203 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3619,259,0
CP000253.1 133249 . T C 1588.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3391;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,67:69:99:1617,117,0
CP000253.1 133255 . C T 1748.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:73:99:1777,126,0
CP000253.1 133352 . A G 1068.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8731;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:78:1097,78,0
CP000253.1 133355 . C T 931.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.800;DP=43;Dels=0.00;ExcessHet=3.0103;FS=3.324;HaplotypeScore=2.8111;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.67;ReadPosRankSum=-1.575;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,42:43:49:960,49,0
CP000253.1 133410 . T C 1004.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1033,72,0
CP000253.1 133451 . A G 737.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:54:766,54,0
CP000253.1 133638 . A G 2579.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1189;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2608,181,0
CP000253.1 133725 . A G 3269.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3298,229,0
CP000253.1 133788 . T A 3164.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3193,223,0
CP000253.1 133891 . T C 2529.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7931;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2558,181,0
CP000253.1 133908 . A G 2497.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2449;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:101:99:2526,178,0
CP000253.1 133914 . C T 2825.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2854,202,0
CP000253.1 133986 . G A 3200.06 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.746;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.53;ReadPosRankSum=0.102;SOR=0.488 GT:AD:DP:GQ:PL 1/1:1,135:137:99:3228,229,0
CP000253.1 134009 . A G 3381.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3410,238,0
CP000253.1 134095 . G A 3708.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6919;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3737,259,0
CP000253.1 134119 . C T 2957.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,123:123:99:2986,208,0
CP000253.1 134120 . G A 2879.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,122:123:99:2908,202,0
CP000253.1 134217 . C T 1421.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1450,102,0
CP000253.1 134313 . C T 2181.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2210,154,0
CP000253.1 134322 . G A 2262.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4814;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2291,160,0
CP000253.1 134477 . T C 3775.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2725;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,161:161:99:3804,262,0
CP000253.1 134547 . A G 2990.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1735;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3019,208,0
CP000253.1 135115 . A G 1828.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1857,129,0
CP000253.1 135121 . A G 1941.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1970,138,0
CP000253.1 135123 . G A 1987.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2016,141,0
CP000253.1 135139 . A G 2162.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2191,154,0
CP000253.1 135175 . A G 2593.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2622,184,0
CP000253.1 135256 . C T 3569.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3598,250,0
CP000253.1 135512 . G A 3390.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0304;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3419,238,0
CP000253.1 135636 . T C 3526.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3555,250,0
CP000253.1 136019 . A T 1833.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2623;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1862,132,0
CP000253.1 136371 . A G 3843.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,171:171:99:3872,265,0
CP000253.1 136710 . G C 621.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:650,45,0
CP000253.1 136731 . G A 667.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:48:696,48,0
CP000253.1 136821 . G A 747.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:54:776,54,0
CP000253.1 136951 . A T 495.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:524,36,0
CP000253.1 136963 . C T 531.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:560,39,0
CP000253.1 136970 . A C 537.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:566,39,0
CP000253.1 137666 . G A 3979.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.787;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5075;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.35;ReadPosRankSum=-0.452;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,156:157:99:4008,286,0
CP000253.1 138228 . A G 5326.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.78;ReadPosRankSum=1.064;SOR=0.253 GT:AD:DP:GQ:PL 1/1:1,214:216:99:5355,373,0
CP000253.1 138341 . C T 6238.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.4160;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,245:246:99:6267,445,0
CP000253.1 138963 . G A 763.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:54:792,54,0
CP000253.1 138990 . T G 890.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:63:919,63,0
CP000253.1 138995 . A G 858.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:60:887,60,0
CP000253.1 139051 . C T 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 139074 . C T 338.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:16:27:367,27,0
CP000253.1 139185 . A G 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 139192 . C T 346.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:27:375,27,0
CP000253.1 139197 . C A 335.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:27:364,27,0
CP000253.1 139202 . G A 343.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:27:372,27,0
CP000253.1 139241 . C G 299.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:328,24,0
CP000253.1 139277 . T G 402.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:431,30,0
CP000253.1 139325 . C T 471.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7819;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:21:36:500,36,0
CP000253.1 139418 . G A 2296.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2325,160,0
CP000253.1 139699 . C T 739.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:768,54,0
CP000253.1 139832 . C T 725.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3614;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:754,54,0
CP000253.1 139847 . T A 778.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:57:807,57,0
CP000253.1 139848 . G A 783.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:57:812,57,0
CP000253.1 140374 . G C 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 140551 . C T 1557.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1586,111,0
CP000253.1 140731 . A C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 140732 . T G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 140735 . T C 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 141274 . C A 1939.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1621;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1968,138,0
CP000253.1 141356 . G A 999.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0015;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1028,72,0
CP000253.1 141358 . A G 933.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:41:69:962,69,0
CP000253.1 141448 . G T 393.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:422,30,0
CP000253.1 141639 . G T 1649.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1678,120,0
CP000253.1 141793 . A G 4654.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,192:194:99:4683,325,0
CP000253.1 141942 . A T 4102.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4131,292,0
CP000253.1 142491 . G C 2454.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2483,175,0
CP000253.1 143496 . G T 2695.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4074;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.23;SOR=1.037 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2724,196,0
CP000253.1 143527 . T A 3048.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.799;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1055;MLEAC=2;MLEAF=1.00;MQ=59.75;MQ0=1;MQRankSum=0.000;QD=25.41;ReadPosRankSum=1.632;SOR=0.556 GT:AD:DP:GQ:PL 1/1:2,118:120:99:3077,220,0
CP000253.1 143691 . G A 3835.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.524;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.0338;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=24.12;ReadPosRankSum=0.958;SOR=0.119 GT:AD:DP:GQ:PL 1/1:2,157:163:99:3864,274,0
CP000253.1 143850 . A G 4134.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7152;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4163,295,0
CP000253.1 144246 . G A 4321.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4697;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=1.099 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4350,307,0
CP000253.1 144663 . T C 3916.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.650;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.74;ReadPosRankSum=0.015;SOR=0.349 GT:AD:DP:GQ:PL 1/1:2,163:165:99:3945,277,0
CP000253.1 144687 . A G 3762.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.717;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.23;ReadPosRankSum=1.647;SOR=0.571 GT:AD:DP:GQ:PL 1/1:1,161:163:99:3791,268,0
CP000253.1 144750 . T C 3076.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.822;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.85;ReadPosRankSum=0.470;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,128:129:99:3105,217,0
CP000253.1 144872 . T C 2128.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.689;DP=85;Dels=0.00;ExcessHet=3.0103;FS=3.854;HaplotypeScore=4.5241;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=0.795;SOR=0.864 GT:AD:DP:GQ:PL 1/1:1,84:85:99:2157,156,0
CP000253.1 144992 . A G 1246.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:87:1275,87,0
CP000253.1 145020 . C T 1280.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:90:1309,90,0
CP000253.1 145056 . T C 1400.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1429,99,0
CP000253.1 145071 . T A 1362.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1391,96,0
CP000253.1 145137 . G A 1232.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1261,87,0
CP000253.1 145140 . A G 1225.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1254,87,0
CP000253.1 145596 . G A 2077.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2106,144,0
CP000253.1 146009 . T A 708.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:737,51,0
CP000253.1 146555 . A T 3691.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.729;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3373;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.61;ReadPosRankSum=1.063;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,149:150:99:3720,230,0
CP000253.1 146845 . T C 2726.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2755,193,0
CP000253.1 147224 . G A 230.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:11:18:259,18,0
CP000253.1 147331 . A T 1312.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1341,93,0
CP000253.1 147545 . A T 3671.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.335;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2986;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=0.000;QD=22.53;ReadPosRankSum=-0.107;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,162:163:99:3700,221,0
CP000253.1 147776 . A G 2470.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.86;SOR=1.216 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2499,178,0
CP000253.1 148349 . A G 3611.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9363;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3640,250,0
CP000253.1 148568 . T C 443.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:472,33,0
CP000253.1 148636 . G T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 148779 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 148793 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 148818 . T G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 149004 . C T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 150570 . T C 2154.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2183,159,0
CP000253.1 150789 . A G 2322.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1426;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2351,166,0
CP000253.1 150823 . G A 2587.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2616,184,0
CP000253.1 152015 . A G 6109.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.823;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3794;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.56;ReadPosRankSum=-0.166;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,229:233:99:6138,436,0
CP000253.1 152133 . A G 5756.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.632;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=39.0741;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.39;ReadPosRankSum=1.661;SOR=0.363 GT:AD:DP:GQ:PL 1/1:1,235:236:99:5785,418,0
CP000253.1 152154 . G A 6023.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.8719;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,237:240:99:6052,427,0
CP000253.1 152164 . G T 5829.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,239:241:99:5858,415,0
CP000253.1 152169 . G A 5907.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.514;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.1189;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.31;ReadPosRankSum=-0.576;SOR=1.003 GT:AD:DP:GQ:PL 1/1:2,241:243:99:5936,396,0
CP000253.1 152192 . T C 5415.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.728;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.3620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.07;ReadPosRankSum=-1.556;SOR=0.702 GT:AD:DP:GQ:PL 1/1:1,224:227:99:5444,388,0
CP000253.1 152253 . C T 5312.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.964 GT:AD:DP:GQ:PL 1/1:0,214:215:99:5341,373,0
CP000253.1 152256 . T C 5165.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.705;DP=215;Dels=0.00;ExcessHet=3.0103;FS=3.547;HaplotypeScore=16.1738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.03;ReadPosRankSum=-0.484;SOR=0.627 GT:AD:DP:GQ:PL 1/1:1,214:215:99:5194,373,0
CP000253.1 152302 . C T 5084.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,208:209:99:5113,361,0
CP000253.1 152317 . A G 4921.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.472;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.37;ReadPosRankSum=0.085;SOR=1.117 GT:AD:DP:GQ:PL 1/1:2,200:208:99:4950,355,0
CP000253.1 152389 . C G 3220.76 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.01;SOR=1.490 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3249,232,0
CP000253.1 152401 . G A 2057.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.938;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.81;ReadPosRankSum=-0.305;SOR=0.635 GT:AD:DP:GQ:PL 1/1:1,73:74:99:2086,150,0
CP000253.1 152755 . T C 3500.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.991;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.83;ReadPosRankSum=0.860;SOR=0.348 GT:AD:DP:GQ:PL 1/1:1,140:143:99:3529,247,0
CP000253.1 153286 . C T 3333.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.835;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.25;ReadPosRankSum=-0.901;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,126:128:99:3362,244,0
CP000253.1 154106 . G A 4728.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.647;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.8522;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.15;ReadPosRankSum=-0.824;SOR=0.537 GT:AD:DP:GQ:PL 1/1:3,185:190:99:4757,304,0
CP000253.1 154408 . T C 6511.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.801;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.0066;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.47;ReadPosRankSum=-0.937;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,245:248:99:6540,473,0
CP000253.1 154584 . C T 6000.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3918;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,239:239:99:6029,427,0
CP000253.1 154687 . A G 5976.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9766;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=25.76;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,232:233:99:6005,433,0
CP000253.1 155232 . T C 6554.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5526;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,247:250:99:6583,479,0
CP000253.1 155350 . A G 6916.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.750;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.78;ReadPosRankSum=0.397;SOR=0.340 GT:AD:DP:GQ:PL 1/1:1,248:249:99:6945,506,0
CP000253.1 155413 . A T 7126.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0692;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=28.62;SOR=1.357 GT:AD:DP:GQ:PL 1/1:0,249:249:99:7155,521,0
CP000253.1 155452 . A G 6901.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3262;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=28.64;SOR=1.332 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6930,506,0
CP000253.1 155745 . A G 3256.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,127:129:99:3285,235,0
CP000253.1 156559 . T A 2834.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2863,199,0
CP000253.1 156824 . C G 1770.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1799,129,0
CP000253.1 156947 . T A 1997.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2026,141,0
CP000253.1 157011 . A T 2321.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1319;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2350,166,0
CP000253.1 157026 . A G 2369.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.481;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.70;ReadPosRankSum=1.490;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,99:100:99:2398,171,0
CP000253.1 157053 . A G 2631.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,110:111:99:2660,187,0
CP000253.1 157056 . G A 2744.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8759;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2773,193,0
CP000253.1 157066 . G T 2855.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,119:120:99:2884,202,0
CP000253.1 157067 . T C 2843.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.916;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.70;ReadPosRankSum=1.733;SOR=0.468 GT:AD:DP:GQ:PL 1/1:1,119:120:99:2872,202,0
CP000253.1 157302 . A T 3095.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3124,217,0
CP000253.1 157400 . C A 2889.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2918,205,0
CP000253.1 158755 . G A 6054.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.981;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.7314;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.44;ReadPosRankSum=-1.642;SOR=0.550 GT:AD:DP:GQ:PL 1/1:3,235:239:99:6083,398,0
CP000253.1 158821 . C T 5502.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.759;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.46;ReadPosRankSum=-1.387;SOR=0.794 GT:AD:DP:GQ:PL 1/1:2,206:210:99:5531,360,0
CP000253.1 158841 . T G 5767.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.672;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.70;ReadPosRankSum=-0.870;SOR=0.750 GT:AD:DP:GQ:PL 1/1:2,214:217:99:5796,378,0
CP000253.1 158857 . A G 6035.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.184;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.36;ReadPosRankSum=0.570;SOR=0.570 GT:AD:DP:GQ:PL 1/1:3,226:230:99:6064,398,0
CP000253.1 158902 . A C 6216.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.607;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.80;ReadPosRankSum=0.840;SOR=0.826 GT:AD:DP:GQ:PL 1/1:2,239:241:99:6245,414,0
CP000253.1 158938 . G T 6223.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1023;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,239:239:99:6252,448,0
CP000253.1 158962 . G A 6352.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9926;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6381,457,0
CP000253.1 159391 . G A 4652.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1849;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,184:184:99:4681,331,0
CP000253.1 159414 . T C 4639.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4374;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,191:191:99:4668,328,0
CP000253.1 159531 . C T 4785.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.4173;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=25.73;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,186:189:99:4814,340,0
CP000253.1 159816 . C A 3186.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7287;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3215,229,0
CP000253.1 160023 . C T 1311.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1340,93,0
CP000253.1 160065 . C A 1368.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:57:99:1397,99,0
CP000253.1 160119 . C T 1956.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1910;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1985,141,0
CP000253.1 160140 . G A 2217.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2246,160,0
CP000253.1 160278 . T A 1751.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1780,126,0
CP000253.1 160290 . T A 1823.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1852,132,0
CP000253.1 160422 . G A 3544.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,147:148:99:3573,250,0
CP000253.1 160833 . A G 4888.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,208:209:99:4917,343,0
CP000253.1 161117 . G A 1666.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2612;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1695,120,0
CP000253.1 161513 . G A 4467.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4496,319,0
CP000253.1 161519 . C T 4432.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.015;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.49;ReadPosRankSum=0.543;SOR=0.981 GT:AD:DP:GQ:PL 1/1:2,179:183:99:4461,277,0
CP000253.1 161531 . A C 4507.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.732;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.6855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.85;ReadPosRankSum=1.432;SOR=0.307 GT:AD:DP:GQ:PL 1/1:4,185:189:99:4536,283,0
CP000253.1 161584 . A T 5212.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.763;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.9460;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=-0.049;QD=24.59;ReadPosRankSum=0.469;SOR=0.946 GT:AD:DP:GQ:PL 1/1:2,210:213:99:5241,336,0
CP000253.1 161741 . T A 6370.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.873;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.142;HaplotypeScore=32.1198;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.90;ReadPosRankSum=0.324;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,245:250:99:6399,429,0
CP000253.1 161947 . G A 5916.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.571;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.1024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.45;ReadPosRankSum=1.111;SOR=0.184 GT:AD:DP:GQ:PL 1/1:2,240:242:99:5945,427,0
CP000253.1 162268 . T A 377.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:30:406,30,0
CP000253.1 162320 . A G 292.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.28;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:11:24:321,24,0
CP000253.1 162406 . T G 301.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6744;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:330,24,0
CP000253.1 162502 . G A 1213.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1242,87,0
CP000253.1 162727 . G T 1094.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2625;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:44:81:1123,81,0
CP000253.1 162836 . A G 6297.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.282;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.736;HaplotypeScore=31.6923;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.19;ReadPosRankSum=2.858;SOR=0.447 GT:AD:DP:GQ:PL 1/1:4,246:250:99:6326,454,0
CP000253.1 163022 . A C 6553.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5384;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.64;ReadPosRankSum=0.986;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,245:246:99:6582,473,0
CP000253.1 163112 . G A 5772.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8472;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.988 GT:AD:DP:GQ:PL 1/1:0,237:237:99:5801,409,0
CP000253.1 163214 . A G 4890.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8343;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,202:202:99:4919,343,0
CP000253.1 163919 . A C 179.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:208,15,0
CP000253.1 163940 . C T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 164021 . C T 443.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:472,33,0
CP000253.1 164030 . A G 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 164031 . A C 362.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:391,27,0
CP000253.1 164034 . T A 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 164039 . A T 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 164041 . T G 403.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:432,30,0
CP000253.1 164046 . A G 396.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:17:30:425,30,0
CP000253.1 164079 . G A 927.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:66:956,66,0
CP000253.1 164094 . C T 927.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:66:956,66,0
CP000253.1 164114 . G T 973.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:69:1002,69,0
CP000253.1 164119 . A G 1008.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:42:72:1037,72,0
CP000253.1 164173 . C T 971.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:40:69:1000,69,0
CP000253.1 164483 . A G 2009.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,86:87:99:2038,141,0
CP000253.1 164607 . A G 1116.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0781;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1145,81,0
CP000253.1 164611 . G C 1083.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3441;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1112,78,0
CP000253.1 164623 . T C 1088.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1117,78,0
CP000253.1 164629 . A T 961.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:72:990,72,0
CP000253.1 164699 . A T 629.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6927;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=0.000;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,25:26:48:658,48,0
CP000253.1 164788 . G C 2656.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2685,190,0
CP000253.1 164814 . C A 2633.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2662,187,0
CP000253.1 165268 . G A 2674.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2703,190,0
CP000253.1 165388 . G A 2481.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.822;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4288;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.40;ReadPosRankSum=0.959;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,93:95:99:2510,181,0
CP000253.1 165389 . T C 2496.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2525,184,0
CP000253.1 165391 . A G 2488.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0836;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.76;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,93:95:99:2517,181,0
CP000253.1 165427 . T C 2205.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4706;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=25.95;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2234,163,0
CP000253.1 165460 . G A 2819.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2155;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.63;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,110:111:99:2848,205,0
CP000253.1 165523 . A T 4230.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.355;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.9823;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=-0.053;QD=23.50;ReadPosRankSum=1.085;SOR=0.390 GT:AD:DP:GQ:PL 1/1:2,178:182:99:4259,307,0
CP000253.1 165619 . A G 4926.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9353;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=23.35;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,211:211:99:4955,343,0
CP000253.1 165704 . T A 5261.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.499;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.3714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.82;ReadPosRankSum=0.452;SOR=0.113 GT:AD:DP:GQ:PL 1/1:2,210:214:99:5290,376,0
CP000253.1 165831 . A C 5657.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.8351;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,220:220:99:5686,403,0
CP000253.1 166018 . A G 4788.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.8643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,199:202:99:4817,349,0
CP000253.1 166067 . C G 4441.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.613;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.7982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.41;ReadPosRankSum=-0.685;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,181:183:99:4470,325,0
CP000253.1 166353 . T A 3712.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3741,268,0
CP000253.1 166442 . T C 3934.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,149:152:99:3963,286,0
CP000253.1 166504 . T C 3969.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3998,286,0
CP000253.1 166535 . T A 4492.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.8271;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4521,322,0
CP000253.1 166590 . T C 4592.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.451;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3999;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.23;ReadPosRankSum=-0.365;SOR=0.115 GT:AD:DP:GQ:PL 1/1:2,180:183:99:4621,337,0
CP000253.1 166971 . C T 6573.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7457;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.51;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,239:240:99:6602,479,0
CP000253.1 167014 . G A 6501.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2061;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6530,469,0
CP000253.1 167074 . T A 6394.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1759;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.99;ReadPosRankSum=-1.296;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,245:246:99:6423,463,0
CP000253.1 167104 . C A 6515.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.564;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.49;ReadPosRankSum=-0.354;SOR=0.343 GT:AD:DP:GQ:PL 1/1:2,244:248:99:6544,473,0
CP000253.1 167188 . A G 6621.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.9463;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,247:250:99:6650,482,0
CP000253.1 167450 . G A 3738.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,145:146:99:3767,268,0
CP000253.1 167452 . C A 3480.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.235;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6786;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.17;ReadPosRankSum=-1.636;SOR=0.337 GT:AD:DP:GQ:PL 1/1:1,143:144:99:3509,249,0
CP000253.1 167464 . T C 3545.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3574,253,0
CP000253.1 167592 . T C 3539.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5003;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3568,253,0
CP000253.1 167593 . A G 3535.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5003;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.00;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3564,253,0
CP000253.1 167596 . G A 3543.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7122;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3572,256,0
CP000253.1 167602 . G A 3664.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3693,262,0
CP000253.1 167604 . A C 3676.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3705,262,0
CP000253.1 167629 . T A 3775.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2101;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3804,268,0
CP000253.1 167640 . G A 3747.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3776,268,0
CP000253.1 167641 . A G 3745.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3774,268,0
CP000253.1 167646 . G C 3748.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3777,268,0
CP000253.1 167650 . T C 3807.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3836,271,0
CP000253.1 167719 . A G 4765.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4794,340,0
CP000253.1 167740 . T A 4625.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6559;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.61;ReadPosRankSum=0.839;SOR=0.669 GT:AD:DP:GQ:PL 1/1:1,187:188:99:4654,331,0
CP000253.1 168157 . G A 4484.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.773;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2690;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.20;ReadPosRankSum=-0.175;SOR=0.337 GT:AD:DP:GQ:PL 1/1:1,177:179:99:4513,319,0
CP000253.1 168286 . T A 3557.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.01;SOR=1.033 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3586,259,0
CP000253.1 168322 . G A 3579.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3608,262,0
CP000253.1 168359 . C G 3482.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1754;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.79;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3511,253,0
CP000253.1 168360 . C T 3476.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.95;ReadPosRankSum=-1.612;SOR=0.309 GT:AD:DP:GQ:PL 1/1:1,128:131:99:3505,250,0
CP000253.1 168363 . T C 3462.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.833;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4749;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.64;ReadPosRankSum=-1.613;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,129:131:99:3491,247,0
CP000253.1 168367 . C T 3500.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3529,253,0
CP000253.1 168496 . C T 3752.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.823;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5659;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.37;ReadPosRankSum=1.395;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,153:157:99:3781,268,0
CP000253.1 168502 . A T 3748.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:156:99:3777,268,0
CP000253.1 168511 . G A 3857.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,156:158:99:3886,274,0
CP000253.1 168516 . C T 3901.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,156:157:99:3930,277,0
CP000253.1 168520 . A G 3748.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.88;ReadPosRankSum=0.629;SOR=0.347 GT:AD:DP:GQ:PL 1/1:1,156:159:99:3777,271,0
CP000253.1 168524 . C G 3758.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.788;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=1.294;SOR=0.325 GT:AD:DP:GQ:PL 1/1:1,157:159:99:3787,271,0
CP000253.1 168545 . G T 3759.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.386;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.0400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.50;ReadPosRankSum=0.591;SOR=0.140 GT:AD:DP:GQ:PL 1/1:2,158:160:99:3788,273,0
CP000253.1 168550 . T A 3719.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.9939;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,158:159:99:3748,268,0
CP000253.1 168591 . A C 3216.73 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.690;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.33;ReadPosRankSum=-0.873;SOR=0.987 GT:AD:DP:GQ:PL 1/1:1,126:127:99:3245,238,0
CP000253.1 168595 . A G 3061.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3090,220,0
CP000253.1 168601 . C T 3174.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8229;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3203,232,0
CP000253.1 168631 . A C 2195.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0812;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=1.153 GT:AD:DP:GQ:PL 1/1:0,87:88:99:2224,160,0
CP000253.1 168646 . C T 2137.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.856;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0581;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.45;ReadPosRankSum=-1.115;SOR=0.483 GT:AD:DP:GQ:PL 1/1:1,83:84:99:2166,157,0
CP000253.1 168732 . T G 1812.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.908;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.90;ReadPosRankSum=0.149;SOR=1.067 GT:AD:DP:GQ:PL 1/1:1,69:70:99:1841,132,0
CP000253.1 168735 . T A 1693.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.146;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1951;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.28;ReadPosRankSum=0.388;SOR=1.051 GT:AD:DP:GQ:PL 1/1:1,66:69:99:1722,120,0
CP000253.1 169012 . T A 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 169074 . A G 258.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:287,21,0
CP000253.1 169249 . A C 130.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:158,12,0
CP000253.1 169279 . T A 306.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:335,24,0
CP000253.1 169456 . C T 615.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:26:45:644,45,0
CP000253.1 169518 . C G 2255.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3022;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2284,160,0
CP000253.1 169817 . A G 2934.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.735;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.08;ReadPosRankSum=-1.363;SOR=0.301 GT:AD:DP:GQ:PL 1/1:1,116:117:99:2963,211,0
CP000253.1 170403 . A T 4017.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8163;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,166:168:99:4046,289,0
CP000253.1 170498 . T A 3997.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8071;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,155:155:99:4026,286,0
CP000253.1 170540 . T C 4127.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.737;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9566;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.80;ReadPosRankSum=1.462;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,159:160:99:4156,304,0
CP000253.1 170567 . G A 3903.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3932,283,0
CP000253.1 171337 . T C 6178.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4162;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=25.96;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,238:238:99:6207,442,0
CP000253.1 171370 . G A 6436.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6708;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6465,460,0
CP000253.1 171595 . G A 5806.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.748;DP=231;Dels=0.00;ExcessHet=3.0103;FS=3.183;HaplotypeScore=11.2966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.14;ReadPosRankSum=0.008;SOR=0.363 GT:AD:DP:GQ:PL 1/1:1,230:231:99:5835,378,0
CP000253.1 171601 . G A 5725.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.332;DP=227;Dels=0.00;ExcessHet=3.0103;FS=3.226;HaplotypeScore=10.6157;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=0.008;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,226:227:99:5754,373,0
CP000253.1 171787 . T C 4461.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.693;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.07;ReadPosRankSum=-0.117;SOR=0.324 GT:AD:DP:GQ:PL 1/1:1,177:179:99:4490,328,0
CP000253.1 171829 . C T 4554.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.404;DP=182;Dels=0.00;ExcessHet=3.0103;FS=3.132;HaplotypeScore=23.2564;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.16;ReadPosRankSum=-0.440;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,180:182:99:4583,303,0
CP000253.1 171862 . G A 4661.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.908;DP=188;Dels=0.00;ExcessHet=3.0103;FS=3.128;HaplotypeScore=22.8486;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=1.131;SOR=0.327 GT:AD:DP:GQ:PL 1/1:1,186:188:99:4690,305,0
CP000253.1 171976 . G A 5749.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.6172;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,235:237:99:5778,406,0
CP000253.1 172030 . A G 5933.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.0503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,239:240:99:5962,418,0
CP000253.1 172210 . T A 4691.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0434;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,180:182:99:4720,337,0
CP000253.1 172288 . A T 4658.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4687,331,0
CP000253.1 172576 . A C 3014.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.461;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8260;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.31;ReadPosRankSum=-0.318;SOR=0.045 GT:AD:DP:GQ:PL 1/1:4,120:124:99:3043,217,0
CP000253.1 172633 . G A 3912.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3941,283,0
CP000253.1 172743 . G A 4988.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7465;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.72;ReadPosRankSum=-0.179;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,193:195:99:5017,355,0
CP000253.1 172824 . T G 5116.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.014;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6164;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.02;ReadPosRankSum=-0.448;SOR=0.078 GT:AD:DP:GQ:PL 1/1:3,210:213:99:5145,364,0
CP000253.1 173439 . G T 4137.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.368;DP=165;Dels=0.00;ExcessHet=3.0103;FS=3.310;HaplotypeScore=13.5029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.08;ReadPosRankSum=-0.987;SOR=0.461 GT:AD:DP:GQ:PL 1/1:1,164:165:99:4166,296,0
CP000253.1 173554 . A C 4309.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5463;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4338,301,0
CP000253.1 173598 . T A 3606.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3635,256,0
CP000253.1 173608 . C T 3789.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0833;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3818,268,0
CP000253.1 173660 . C T 3387.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,137:140:99:3416,241,0
CP000253.1 173752 . A G 2616.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2604;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.956 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2645,187,0
CP000253.1 174480 . A G 6699.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1491;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6728,485,0
CP000253.1 174572 . C A 6400.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5163;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,243:244:99:6429,463,0
CP000253.1 174888 . T A 4873.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,196:196:99:4902,349,0
CP000253.1 174900 . G A 5075.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1666;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,197:197:99:5104,367,0
CP000253.1 174906 . G A 5084.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,198:198:99:5113,364,0
CP000253.1 174918 . A G 4718.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6501;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4747,340,0
CP000253.1 174930 . T C 4599.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.844;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.14;ReadPosRankSum=1.734;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,182:184:99:4628,334,0
CP000253.1 175098 . G A 6148.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.629;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9259;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=-0.045;QD=25.10;ReadPosRankSum=1.398;SOR=0.842 GT:AD:DP:GQ:PL 1/1:2,243:245:99:6177,398,0
CP000253.1 175340 . C A 3871.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1700;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3900,277,0
CP000253.1 177672 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 177825 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 177990 . A C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 180103 . G T 374.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:403,30,0
CP000253.1 180107 . C T 339.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:27:368,27,0
CP000253.1 180145 . A G 483.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:512,36,0
CP000253.1 180184 . A G 956.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:69:985,69,0
CP000253.1 180220 . T C 1104.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1133,81,0
CP000253.1 180231 . A G 1475.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1504,108,0
CP000253.1 180240 . G T 1682.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.928;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.89;ReadPosRankSum=1.525;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,64:65:99:1711,120,0
CP000253.1 180246 . T C 1760.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2319;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1789,129,0
CP000253.1 180262 . A G 1759.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.602;DP=71;Dels=0.00;ExcessHet=3.0103;FS=3.347;HaplotypeScore=4.5832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.79;ReadPosRankSum=1.052;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1788,109,0
CP000253.1 180267 . C T 1940.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1969,138,0
CP000253.1 180347 . A G 4118.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.823;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4288;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.23;ReadPosRankSum=-1.132;SOR=0.304 GT:AD:DP:GQ:PL 1/1:1,169:171:99:4147,289,0
CP000253.1 180350 . C T 4088.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7284;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4117,289,0
CP000253.1 180353 . G C 3974.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4524;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,166:169:99:4003,283,0
CP000253.1 180355 . A G 4204.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.45;ReadPosRankSum=-0.927;SOR=0.510 GT:AD:DP:GQ:PL 1/1:1,171:173:99:4233,295,0
CP000253.1 180363 . T C 4658.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.650;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.95;ReadPosRankSum=1.375;SOR=0.266 GT:AD:DP:GQ:PL 1/1:1,202:203:99:4687,328,0
CP000253.1 180386 . G A 5001.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9353;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,214:214:99:5030,346,0
CP000253.1 180453 . C T 5426.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.3018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,231:232:99:5455,376,0
CP000253.1 180681 . A T 2568.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6171;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2597,187,0
CP000253.1 180757 . G C 2740.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4526;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2769,196,0
CP000253.1 181592 . C T 3974.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2853;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,153:155:99:4003,289,0
CP000253.1 181643 . T G 3912.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0903;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,157:158:99:3941,277,0
CP000253.1 181845 . G A 3638.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=1.032 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3667,256,0
CP000253.1 181917 . G A 2890.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=1.129 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2919,205,0
CP000253.1 182217 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 182261 . A G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 182262 . G A 101.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:129,9,0
CP000253.1 182410 . G T 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 182442 . G A 954.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.950;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.48;ReadPosRankSum=1.294;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,38:39:69:983,69,0
CP000253.1 182476 . T A 1221.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1250,87,0
CP000253.1 182511 . A G 1588.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,64:65:99:1617,114,0
CP000253.1 182811 . G T 5524.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5217;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.71;ReadPosRankSum=-1.688;SOR=0.230 GT:AD:DP:GQ:PL 1/1:1,232:233:99:5553,385,0
CP000253.1 183270 . G T 3180.76 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9429;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=1.207 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3209,232,0
CP000253.1 183306 . T C 2177.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.57;SOR=1.522 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2206,160,0
CP000253.1 183414 . C T 426.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7005;MLEAC=2;MLEAF=1.00;MQ=59.70;MQ0=0;QD=22.46;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:455,33,0
CP000253.1 183439 . C T 488.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:517,36,0
CP000253.1 183441 . C A 475.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:504,36,0
CP000253.1 183448 . A C 475.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:504,36,0
CP000253.1 183449 . T A 492.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:521,36,0
CP000253.1 183450 . T A 492.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:521,36,0
CP000253.1 183471 . T C 660.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:689,48,0
CP000253.1 183485 . C T 670.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:48:699,48,0
CP000253.1 183488 . C T 652.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:48:681,48,0
CP000253.1 183512 . A G 748.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:777,54,0
CP000253.1 183585 . G A 910.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:66:939,66,0
CP000253.1 183608 . T C 1114.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1581;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1143,81,0
CP000253.1 183684 . A G 1499.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:62:99:1528,108,0
CP000253.1 185355 . T C 1690.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1733;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1719,120,0
CP000253.1 185381 . A G 1879.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1908,135,0
CP000253.1 185643 . C T 1010.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1039,72,0
CP000253.1 185898 . G A 1409.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1438,102,0
CP000253.1 185910 . G T 1367.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1396,99,0
CP000253.1 186010 . C T 1066.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.751;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.19;ReadPosRankSum=0.226;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,45:48:78:1095,78,0
CP000253.1 186013 . G C 1094.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.80;ReadPosRankSum=-0.679;SOR=0.433 GT:AD:DP:GQ:PL 1/1:1,45:46:78:1123,78,0
CP000253.1 186051 . C T 980.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.751;DP=42;Dels=0.00;ExcessHet=3.0103;FS=3.340;HaplotypeScore=4.5401;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.92;ReadPosRankSum=1.737;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,40:42:72:1009,72,0
CP000253.1 186553 . A C 2601.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0695;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.78;ReadPosRankSum=0.743;SOR=0.736 GT:AD:DP:GQ:PL 1/1:1,104:105:99:2630,187,0
CP000253.1 186622 . T C 2708.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8603;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2737,196,0
CP000253.1 187096 . C T 5453.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8745;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,214:214:99:5482,391,0
CP000253.1 187119 . C T 5579.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.934;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.8665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.36;ReadPosRankSum=-1.575;SOR=0.113 GT:AD:DP:GQ:PL 1/1:2,218:222:99:5608,369,0
CP000253.1 187138 . A T 5698.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.163;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.9780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.67;ReadPosRankSum=1.623;SOR=0.093 GT:AD:DP:GQ:PL 1/1:3,228:232:99:5727,406,0
CP000253.1 187171 . A G 5736.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.7858;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,238:238:99:5765,409,0
CP000253.1 187231 . A C 6068.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.859;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.3733;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=-0.919;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,246:250:99:6097,430,0
CP000253.1 187291 . T C 6027.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6021;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,239:240:99:6056,433,0
CP000253.1 187342 . T C 5813.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.536;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.0104;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=1.373;SOR=0.747 GT:AD:DP:GQ:PL 1/1:2,226:231:99:5842,418,0
CP000253.1 187402 . T C 5686.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,219:222:99:5715,409,0
CP000253.1 187433 . G A 5559.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5588,400,0
CP000253.1 187730 . T C 5592.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.5738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=0.882 GT:AD:DP:GQ:PL 1/1:0,217:221:99:5621,406,0
CP000253.1 187744 . A G 5727.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.9676;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5756,412,0
CP000253.1 187935 . A G 4546.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3249;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=26.75;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4575,328,0
CP000253.1 187966 . T C 3929.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9272;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=26.55;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3958,286,0
CP000253.1 187987 . A G 3314.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=27.39;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,121:122:99:3343,244,0
CP000253.1 187988 . C T 3019.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=26.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3048,220,0
CP000253.1 188144 . G A 2900.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2929,208,0
CP000253.1 188152 . A G 2889.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2918,208,0
CP000253.1 188155 . T A 2878.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2907,205,0
CP000253.1 188160 . T A 2886.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2915,205,0
CP000253.1 188161 . G T 2880.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2909,208,0
CP000253.1 188164 . A T 2847.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2876,205,0
CP000253.1 188167 . T A 2830.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2859,202,0
CP000253.1 188176 . A G 4001.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4030,280,0
CP000253.1 188213 . G A 4395.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6546;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=0.000;QD=23.76;ReadPosRankSum=1.733;SOR=0.280 GT:AD:DP:GQ:PL 1/1:1,184:185:99:4424,307,0
CP000253.1 188241 . C T 4275.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.9570;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4304,298,0
CP000253.1 188242 . A G 4232.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.9586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4261,295,0
CP000253.1 188271 . A T 3970.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.696;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2374;MLEAC=2;MLEAF=1.00;MQ=59.84;MQ0=0;MQRankSum=13.077;QD=23.36;ReadPosRankSum=1.729;SOR=0.304 GT:AD:DP:GQ:PL 1/1:1,169:172:99:3999,260,0
CP000253.1 188275 . A C 4105.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3433;MLEAC=2;MLEAF=1.00;MQ=59.84;MQ0=0;QD=24.01;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,171:172:99:4134,292,0
CP000253.1 188279 . G A 3952.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.014;DP=172;Dels=0.01;ExcessHet=3.0103;FS=2.288;HaplotypeScore=15.4492;MLEAC=2;MLEAF=1.00;MQ=59.84;MQ0=0;MQRankSum=7.506;QD=23.25;ReadPosRankSum=-0.114;SOR=0.664 GT:AD:DP:GQ:PL 1/1:3,167:170:99:3981,276,0
CP000253.1 188305 . A G 4152.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,167:168:99:4181,292,0
CP000253.1 188314 . A G 3533.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.57;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3562,250,0
CP000253.1 188315 . T A 3526.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3555,250,0
CP000253.1 188317 . T A 3526.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3555,250,0
CP000253.1 188319 . C G 3421.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3450,244,0
CP000253.1 188329 . A T 3578.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,136:137:99:3607,253,0
CP000253.1 188332 . A C 3478.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.122 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3507,250,0
CP000253.1 188335 . G A 3593.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=1.122 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3622,253,0
CP000253.1 188345 . G A 3695.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3724,262,0
CP000253.1 188365 . T A 2936.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3463;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=1.149 GT:AD:DP:GQ:PL 1/1:0,114:116:99:2965,208,0
CP000253.1 188372 . A C 2588.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.883;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4078;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.89;ReadPosRankSum=1.006;SOR=0.429 GT:AD:DP:GQ:PL 1/1:1,99:100:99:2617,184,0
CP000253.1 188373 . C A 2629.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4078;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=1.167 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2658,187,0
CP000253.1 188384 . C G 2271.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=1.218 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2300,163,0
CP000253.1 188385 . G C 2281.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=1.218 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2310,166,0
CP000253.1 188386 . G A 2313.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=1.218 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2342,166,0
CP000253.1 188434 . G A 598.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8658;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:627,45,0
CP000253.1 188451 . G A 477.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:36:506,36,0
CP000253.1 188452 . A T 462.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:36:491,36,0
CP000253.1 188459 . T A 458.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:36:487,36,0
CP000253.1 188483 . T C 1097.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=24.95;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1126,78,0
CP000253.1 188490 . A G 1058.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=24.06;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1087,75,0
CP000253.1 188500 . G A 1042.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=24.25;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,43:44:75:1071,75,0
CP000253.1 188509 . C A 1179.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=24.58;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1208,84,0
CP000253.1 188514 . C T 1205.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=24.61;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:50:87:1234,87,0
CP000253.1 188535 . G A 1288.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.43;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1317,90,0
CP000253.1 188537 . A G 1312.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.87;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1341,93,0
CP000253.1 188538 . A T 1320.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=24.01;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1349,93,0
CP000253.1 188541 . C T 1323.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=24.07;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1352,93,0
CP000253.1 188546 . C A 1263.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=22.98;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1292,90,0
CP000253.1 188559 . A G 1331.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.36;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1360,93,0
CP000253.1 188575 . C A 1508.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6770;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=23.21;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1537,105,0
CP000253.1 188582 . T C 1467.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6379;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=23.30;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1496,105,0
CP000253.1 188606 . T C 1390.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.626;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;MQRankSum=-0.093;QD=23.18;ReadPosRankSum=1.175;SOR=0.914 GT:AD:DP:GQ:PL 1/1:2,58:60:99:1419,99,0
CP000253.1 188619 . C T 1195.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.00;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1224,84,0
CP000253.1 188631 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188632 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188634 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188640 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188643 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188650 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188653 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188656 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188659 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188661 . T G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188670 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188682 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188684 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188685 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 188696 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 188706 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 188708 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 188723 . G T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 188746 . T A 124.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:152,12,0
CP000253.1 188771 . A G 143.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:171,12,0
CP000253.1 188774 . A T 176.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:205,15,0
CP000253.1 188777 . G A 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 188785 . C T 271.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:300,21,0
CP000253.1 188882 . G A 300.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:329,24,0
CP000253.1 188885 . T A 286.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.68;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:315,24,0
CP000253.1 188886 . T C 249.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:278,21,0
CP000253.1 188888 . A G 291.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:320,24,0
CP000253.1 188933 . G A 601.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.66;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:45:630,45,0
CP000253.1 189154 . T C 1825.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1854,129,0
CP000253.1 189435 . T C 2397.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2426,166,0
CP000253.1 189671 . A G 138.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:166,12,0
CP000253.1 189672 . C A 131.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:159,12,0
CP000253.1 189687 . C T 359.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:388,27,0
CP000253.1 189755 . C T 1495.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8345;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1524,105,0
CP000253.1 189761 . A C 1523.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1552,105,0
CP000253.1 189767 . A G 1613.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1642,111,0
CP000253.1 190704 . C A 3326.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7015;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3355,232,0
CP000253.1 190724 . T C 3417.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3446,241,0
CP000253.1 190844 . G A 3883.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6323;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,164:164:99:3912,271,0
CP000253.1 190940 . C T 3776.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1429;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,160:161:99:3805,262,0
CP000253.1 190981 . T A 3884.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4909;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,165:165:99:3913,274,0
CP000253.1 191054 . A T 3560.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5394;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3589,247,0
CP000253.1 191069 . T G 3421.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8598;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3450,241,0
CP000253.1 191118 . G A 2986.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2062;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3015,211,0
CP000253.1 191319 . C T 478.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:39:507,39,0
CP000253.1 191769 . T A 2501.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.760;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.77;ReadPosRankSum=0.223;SOR=0.386 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2530,178,0
CP000253.1 191835 . T C 2595.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.699;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7435;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=24.72;ReadPosRankSum=-0.776;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,104:108:99:2624,190,0
CP000253.1 191901 . C T 2929.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2958,211,0
CP000253.1 192261 . C T 969.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:72:998,72,0
CP000253.1 192423 . A G 2492.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5990;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2521,178,0
CP000253.1 192424 . C T 2477.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.274;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.60;ReadPosRankSum=-0.082;SOR=0.117 GT:AD:DP:GQ:PL 1/1:2,103:105:99:2506,145,0
CP000253.1 192441 . T C 2796.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9244;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:116:99:2825,199,0
CP000253.1 192453 . C T 3668.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3697,259,0
CP000253.1 192498 . T C 3609.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.44;ReadPosRankSum=-1.024;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,153:155:99:3638,256,0
CP000253.1 192508 . G A 3743.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8309;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:156:99:3772,265,0
CP000253.1 193053 . T A 1702.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6373;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=-0.663;SOR=0.365 GT:AD:DP:GQ:PL 1/1:1,67:68:99:1731,123,0
CP000253.1 193071 . T C 1555.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1584,111,0
CP000253.1 193137 . A G 1282.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6183;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:96:1311,96,0
CP000253.1 193299 . G A 2366.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2395,166,0
CP000253.1 193509 . A C 1969.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1998,141,0
CP000253.1 193767 . T C 2768.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4719;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.33;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,124:124:99:2797,193,0
CP000253.1 193961 . G T 685.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.856;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3999;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.38;ReadPosRankSum=1.335;SOR=0.861 GT:AD:DP:GQ:PL 1/1:1,25:26:51:714,51,0
CP000253.1 194000 . T A 607.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:636,45,0
CP000253.1 194136 . A G 1354.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1833;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:55:99:1383,99,0
CP000253.1 194330 . T C 1919.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,83:84:99:1948,138,0
CP000253.1 194420 . T C 3304.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.677;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0360;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.95;ReadPosRankSum=-0.259;SOR=0.784 GT:AD:DP:GQ:PL 1/1:2,136:138:99:3333,232,0
CP000253.1 195549 . A T 1611.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,64:65:99:1640,117,0
CP000253.1 195765 . G A 2555.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0373;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2584,178,0
CP000253.1 196327 . T C 3485.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.5766;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,138:140:99:3514,262,0
CP000253.1 196333 . A G 3897.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.9429;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3926,286,0
CP000253.1 196441 . T C 4049.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6883;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4078,298,0
CP000253.1 196445 . C A 4145.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.556;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7372;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=2.321;SOR=0.127 GT:AD:DP:GQ:PL 1/1:2,160:162:99:4174,301,0
CP000253.1 196448 . G C 4134.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7276;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.00;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,159:162:99:4163,304,0
CP000253.1 196534 . A T 3506.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.763;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1799;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.83;ReadPosRankSum=-1.128;SOR=0.376 GT:AD:DP:GQ:PL 1/1:1,125:127:99:3535,259,0
CP000253.1 196543 . A G 3641.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.23;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3670,268,0
CP000253.1 196562 . G A 3266.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.955;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3184;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.43;ReadPosRankSum=-1.577;SOR=0.643 GT:AD:DP:GQ:PL 1/1:1,110:111:99:3295,241,0
CP000253.1 196573 . T C 3147.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1423;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.86;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3176,235,0
CP000253.1 196588 . A T 3524.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.751;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9305;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.37;ReadPosRankSum=0.058;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,119:121:99:3553,262,0
CP000253.1 196600 . C T 3651.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.75;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,127:129:99:3680,271,0
CP000253.1 196606 . A G 3716.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1511;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3745,274,0
CP000253.1 196612 . T A 4059.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.21;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,139:140:99:4088,301,0
CP000253.1 196690 . A G 5256.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.4185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=1.110 GT:AD:DP:GQ:PL 1/1:0,197:197:99:5285,385,0
CP000253.1 196697 . C G 5370.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.7931;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=1.052 GT:AD:DP:GQ:PL 1/1:0,199:201:99:5399,388,0
CP000253.1 196750 . T C 5638.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,225:226:99:5667,409,0
CP000253.1 196762 . A C 5498.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.831;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.88;ReadPosRankSum=1.670;SOR=0.553 GT:AD:DP:GQ:PL 1/1:1,220:221:99:5527,397,0
CP000253.1 196780 . T C 5573.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.2171;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,220:222:99:5602,400,0
CP000253.1 196861 . T G 6366.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=0.943 GT:AD:DP:GQ:PL 1/1:0,239:239:99:6395,460,0
CP000253.1 196909 . C T 6352.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.812;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6953;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.36;ReadPosRankSum=0.719;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,240:242:99:6381,466,0
CP000253.1 196915 . T C 6386.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.18;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,235:235:99:6415,464,0
CP000253.1 197197 . T C 5563.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.27;SOR=1.306 GT:AD:DP:GQ:PL 1/1:0,204:205:99:5592,406,0
CP000253.1 197320 . T G 4026.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.667;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6412;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.77;ReadPosRankSum=-1.612;SOR=0.148 GT:AD:DP:GQ:PL 1/1:2,143:145:99:4055,295,0
CP000253.1 197380 . T C 3846.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.695;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.9162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.14;ReadPosRankSum=0.532;SOR=0.754 GT:AD:DP:GQ:PL 1/1:1,152:154:99:3875,280,0
CP000253.1 197434 . A C 4267.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.616;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.87;ReadPosRankSum=-0.089;SOR=0.623 GT:AD:DP:GQ:PL 1/1:2,163:166:99:4296,310,0
CP000253.1 197437 . G A 4444.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7348;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.94;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,165:166:99:4473,316,0
CP000253.1 197440 . T C 4355.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.541;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.40;ReadPosRankSum=0.953;SOR=0.981 GT:AD:DP:GQ:PL 1/1:2,163:167:99:4384,316,0
CP000253.1 197455 . G A 4472.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.27;ReadPosRankSum=1.732;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,176:177:99:4501,322,0
CP000253.1 197524 . A T 4384.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.9646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,179:181:99:4413,313,0
CP000253.1 197548 . G C 3874.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.7605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,156:157:99:3903,280,0
CP000253.1 197551 . A T 3863.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3355;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.09;ReadPosRankSum=1.305;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,153:156:99:3892,280,0
CP000253.1 197554 . T G 3894.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5205;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3923,286,0
CP000253.1 197576 . T G 3909.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.713;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.42;ReadPosRankSum=-0.363;SOR=0.365 GT:AD:DP:GQ:PL 1/1:1,147:149:99:3938,289,0
CP000253.1 197596 . T A 4144.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3366;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.017 GT:AD:DP:GQ:PL 1/1:0,154:155:99:4173,298,0
CP000253.1 197635 . G A 3917.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.5889;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.79;ReadPosRankSum=-0.098;SOR=0.348 GT:AD:DP:GQ:PL 1/1:1,140:143:99:3946,283,0
CP000253.1 197641 . C G 3938.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3607;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3967,292,0
CP000253.1 197647 . T C 3631.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.676;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0969;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.70;ReadPosRankSum=1.681;SOR=0.296 GT:AD:DP:GQ:PL 1/1:1,135:137:99:3660,265,0
CP000253.1 197729 . C T 4035.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.730;DP=151;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.09;ReadPosRankSum=-1.186;SOR=0.579 GT:AD:DP:GQ:PL 1/1:1,148:150:99:4064,298,0
CP000253.1 197827 . T C 4712.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.2382;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,182:183:99:4741,337,0
CP000253.1 197920 . C A 4518.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2696;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4547,316,0
CP000253.1 197923 . A G 4484.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4513,316,0
CP000253.1 197935 . T A 4313.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,175:176:99:4342,304,0
CP000253.1 198097 . G T 2774.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.131;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5042;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.69;ReadPosRankSum=-1.722;SOR=1.189 GT:AD:DP:GQ:PL 1/1:2,106:108:99:2803,160,0
CP000253.1 198207 . C T 671.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.99;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:51:700,51,0
CP000253.1 198214 . G A 517.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:39:546,39,0
CP000253.1 198320 . T G 1376.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=1.287 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1405,99,0
CP000253.1 198418 . C A 3058.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2525;MLEAC=2;MLEAF=1.00;MQ=59.81;MQ0=0;QD=25.49;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3087,217,0
CP000253.1 198601 . A G 4294.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.641;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9230;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.13;ReadPosRankSum=-1.616;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,177:180:99:4323,307,0
CP000253.1 198760 . G A 4354.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=168;Dels=0.00;ExcessHet=3.0103;FS=4.032;HaplotypeScore=20.2172;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.08;ReadPosRankSum=-1.245;SOR=0.970 GT:AD:DP:GQ:PL 1/1:1,166:168:99:4383,313,0
CP000253.1 198778 . G T 3988.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.171 GT:AD:DP:GQ:PL 1/1:0,155:155:99:4017,286,0
CP000253.1 198793 . A G 3631.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.803;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.40;ReadPosRankSum=-1.200;SOR=0.418 GT:AD:DP:GQ:PL 1/1:1,142:143:99:3660,259,0
CP000253.1 198799 . G A 3161.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8949;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=1.135 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3190,226,0
CP000253.1 198854 . C T 2886.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.753;DP=116;Dels=0.00;ExcessHet=3.0103;FS=3.795;HaplotypeScore=10.7008;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=-0.919;SOR=0.814 GT:AD:DP:GQ:PL 1/1:1,114:116:99:2915,208,0
CP000253.1 198874 . C T 2564.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2593,187,0
CP000253.1 199281 . A G 2953.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9529;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,127:127:99:2982,205,0
CP000253.1 199330 . A T 2619.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2648,184,0
CP000253.1 199367 . A G 2223.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.691;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.66;ReadPosRankSum=-0.682;SOR=0.232 GT:AD:DP:GQ:PL 1/1:1,93:94:99:2252,123,0
CP000253.1 199369 . A T 2216.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2245,157,0
CP000253.1 199434 . A G 1639.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.258;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=2.269;SOR=1.000 GT:AD:DP:GQ:PL 1/1:2,65:67:79:1668,79,0
CP000253.1 199504 . T C 1184.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1213,84,0
CP000253.1 199527 . T C 1009.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1038,72,0
CP000253.1 199553 . A C 900.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.875;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.35;ReadPosRankSum=-0.281;SOR=0.323 GT:AD:DP:GQ:PL 1/1:1,36:37:66:929,66,0
CP000253.1 199560 . A T 915.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:66:944,66,0
CP000253.1 200147 . G A 267.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:296,21,0
CP000253.1 200247 . G T 817.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:60:846,60,0
CP000253.1 200405 . C T 4083.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1116;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,174:175:99:4112,283,0
CP000253.1 200462 . A C 4135.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0087;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4164,289,0
CP000253.1 200549 . A G 3931.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,164:164:99:3960,280,0
CP000253.1 200795 . C T 3667.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,142:144:99:3696,265,0
CP000253.1 200828 . A T 3869.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9559;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,151:154:99:3898,280,0
CP000253.1 200957 . G A 6492.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.851;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.39;ReadPosRankSum=-0.698;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,245:249:99:6521,470,0
CP000253.1 202017 . G T 1783.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3030;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1812,126,0
CP000253.1 202054 . T A 1225.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:56:87:1254,87,0
CP000253.1 202339 . C A 1726.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1755,123,0
CP000253.1 202348 . G A 1614.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1643,114,0
CP000253.1 202592 . T A 6388.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.914;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.76;ReadPosRankSum=-1.467;SOR=0.502 GT:AD:DP:GQ:PL 1/1:1,247:248:99:6417,452,0
CP000253.1 202759 . T A 6155.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4708;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.76;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,230:231:99:6184,442,0
CP000253.1 202877 . G A 5671.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,223:223:99:5700,409,0
CP000253.1 203786 . T C 1188.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:51:84:1217,84,0
CP000253.1 203874 . T C 1078.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:75:1107,75,0
CP000253.1 203942 . T A 433.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:33:462,33,0
CP000253.1 204098 . C A 2229.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2258,160,0
CP000253.1 204179 . A G 3957.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.968;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1688;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.53;ReadPosRankSum=0.034;SOR=0.888 GT:AD:DP:GQ:PL 1/1:1,154:156:99:3986,280,0
CP000253.1 204323 . T C 5043.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.631;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0033;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.90;ReadPosRankSum=1.544;SOR=0.602 GT:AD:DP:GQ:PL 1/1:1,210:212:99:5072,361,0
CP000253.1 204388 . A G 6056.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6085,424,0
CP000253.1 204802 . A G 2989.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1860;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3018,220,0
CP000253.1 205057 . C T 2735.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3597;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=22.61;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,121:122:99:2764,190,0
CP000253.1 205078 . A G 2702.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,120:121:99:2731,187,0
CP000253.1 205138 . G A 2332.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.986;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.43;ReadPosRankSum=-0.833;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,103:104:99:2361,142,0
CP000253.1 205144 . A G 2208.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.988;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.54;ReadPosRankSum=-0.955;SOR=0.388 GT:AD:DP:GQ:PL 1/1:1,97:98:99:2237,154,0
CP000253.1 205243 . G T 873.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8885;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:63:902,63,0
CP000253.1 205272 . C A 441.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.04;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:470,33,0
CP000253.1 207113 . T C 5337.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,215:218:99:5366,385,0
CP000253.1 207227 . T A 6095.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.817 GT:AD:DP:GQ:PL 1/1:0,238:239:99:6124,436,0
CP000253.1 207620 . T C 5458.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,222:222:99:5487,385,0
CP000253.1 208458 . A G 2569.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.810;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.15;ReadPosRankSum=-1.140;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,110:111:99:2598,181,0
CP000253.1 208752 . T C 4234.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.080 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4263,301,0
CP000253.1 209048 . C G 3777.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2280;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=1.233 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3806,271,0
CP000253.1 209050 . T C 3611.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.426;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.08;ReadPosRankSum=-1.385;SOR=1.257 GT:AD:DP:GQ:PL 1/1:2,148:150:99:3640,259,0
CP000253.1 209069 . G T 3043.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0797;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3072,217,0
CP000253.1 209109 . T C 2270.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2299,163,0
CP000253.1 209166 . T A 1642.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1671,117,0
CP000253.1 209458 . C T 633.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.85;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:662,45,0
CP000253.1 209466 . G A 590.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:619,42,0
CP000253.1 209468 . T A 594.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:623,42,0
CP000253.1 209477 . C T 589.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:618,42,0
CP000253.1 209822 . T C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 209840 . T C 494.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:523,36,0
CP000253.1 209841 . C T 497.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:526,36,0
CP000253.1 209924 . G A 719.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:748,51,0
CP000253.1 209948 . A G 877.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:63:906,63,0
CP000253.1 210329 . T G 2459.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.562;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.43;ReadPosRankSum=0.634;SOR=1.022 GT:AD:DP:GQ:PL 1/1:2,103:105:99:2488,175,0
CP000253.1 210473 . T C 4038.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.018;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.04;ReadPosRankSum=-1.392;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,167:169:99:4067,286,0
CP000253.1 210498 . A G 4205.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.972;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.17;ReadPosRankSum=-0.408;SOR=0.279 GT:AD:DP:GQ:PL 1/1:1,173:174:99:4234,295,0
CP000253.1 210540 . T C 4634.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.836;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.14;ReadPosRankSum=1.092;SOR=0.304 GT:AD:DP:GQ:PL 1/1:1,191:195:99:4663,328,0
CP000253.1 210599 . A T 4621.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.850;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3978;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.53;ReadPosRankSum=-0.163;SOR=0.366 GT:AD:DP:GQ:PL 1/1:1,180:185:99:4650,331,0
CP000253.1 212329 . T A 508.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.35;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:36:537,36,0
CP000253.1 212331 . A T 463.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:25:33:492,33,0
CP000253.1 212339 . G C 568.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:597,42,0
CP000253.1 212361 . C T 671.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:700,48,0
CP000253.1 212433 . A G 582.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:611,42,0
CP000253.1 212439 . T A 620.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:649,45,0
CP000253.1 212454 . T C 557.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:42:586,42,0
CP000253.1 212475 . T A 425.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:33:454,33,0
CP000253.1 212493 . A G 468.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.30;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:36:497,36,0
CP000253.1 212514 . A T 426.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.48;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:33:455,33,0
CP000253.1 212523 . G A 389.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:30:418,30,0
CP000253.1 212530 . A G 259.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.48;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:21:288,21,0
CP000253.1 212535 . T A 260.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.60;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:21:289,21,0
CP000253.1 212540 . C A 248.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.10;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:21:277,21,0
CP000253.1 212544 . T C 258.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.35;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:21:287,21,0
CP000253.1 212547 . C T 254.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.85;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:21:283,21,0
CP000253.1 212549 . A T 257.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.23;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:21:286,21,0
CP000253.1 212554 . A G 258.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.35;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:21:287,21,0
CP000253.1 212555 . C A 257.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.23;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:21:286,21,0
CP000253.1 212556 . A G 258.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.35;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:21:287,21,0
CP000253.1 212559 . T G 293.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.64;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:24:322,24,0
CP000253.1 212565 . T A 654.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=1.519 GT:AD:DP:GQ:PL 1/1:0,24:24:48:683,48,0
CP000253.1 212601 . G A 1175.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.39;SOR=1.788 GT:AD:DP:GQ:PL 1/1:0,40:41:87:1204,87,0
CP000253.1 212625 . T C 1376.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.29;SOR=1.814 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1405,102,0
CP000253.1 212628 . T A 1383.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.44;SOR=1.814 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1412,102,0
CP000253.1 212640 . G T 1526.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.81;SOR=1.791 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1555,114,0
CP000253.1 212660 . G A 1643.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.34;SOR=1.733 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1672,123,0
CP000253.1 212661 . A G 1632.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.15;SOR=1.733 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1661,126,0
CP000253.1 212669 . A T 2201.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.36;ReadPosRankSum=1.042;SOR=1.716 GT:AD:DP:GQ:PL 1/1:1,74:75:99:2230,163,0
CP000253.1 212679 . G T 2092.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.67;SOR=1.810 GT:AD:DP:GQ:PL 1/1:0,73:74:99:2121,157,0
CP000253.1 212682 . A T 2127.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.75;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2156,156,0
CP000253.1 212685 . A T 2239.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.35;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2268,166,0
CP000253.1 212719 . G T 2802.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=1.300 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2831,205,0
CP000253.1 212720 . C T 2958.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7121;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=1.274 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2987,214,0
CP000253.1 212732 . A G 3011.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.543;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.52;ReadPosRankSum=0.292;SOR=1.290 GT:AD:DP:GQ:PL 1/1:2,116:118:99:3040,217,0
CP000253.1 212733 . T A 3085.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=1.247 GT:AD:DP:GQ:PL 1/1:0,119:120:99:3114,223,0
CP000253.1 212739 . A G 3244.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4673;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=1.099 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3273,232,0
CP000253.1 212790 . T G 3703.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.403;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8354;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.69;ReadPosRankSum=-1.051;SOR=0.363 GT:AD:DP:GQ:PL 1/1:1,149:150:99:3732,267,0
CP000253.1 212796 . A G 3680.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.720;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.38;ReadPosRankSum=0.167;SOR=0.735 GT:AD:DP:GQ:PL 1/1:1,144:147:99:3709,265,0
CP000253.1 212805 . T A 3800.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.03;ReadPosRankSum=0.202;SOR=0.756 GT:AD:DP:GQ:PL 1/1:1,145:147:99:3829,271,0
CP000253.1 212817 . G A 3209.76 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3238,232,0
CP000253.1 212819 . G A 3221.92 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1236;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.63;ReadPosRankSum=0.960;SOR=0.783 GT:AD:DP:GQ:PL 1/1:1,120:121:99:3250,235,0
CP000253.1 212820 . C A 3249.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0901;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.86;SOR=1.052 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3278,235,0
CP000253.1 212826 . T C 3056.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.303;DP=121;Dels=0.00;ExcessHet=3.0103;FS=3.716;HaplotypeScore=22.9034;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.47;ReadPosRankSum=0.852;SOR=0.758 GT:AD:DP:GQ:PL 1/1:1,119:121:99:3085,225,0
CP000253.1 212827 . A T 3162.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.676;DP=121;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.9550;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.36;ReadPosRankSum=-0.708;SOR=0.386 GT:AD:DP:GQ:PL 1/1:1,119:120:99:3191,229,0
CP000253.1 212828 . C A 3151.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=121;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.0964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.49;ReadPosRankSum=-0.699;SOR=0.399 GT:AD:DP:GQ:PL 1/1:1,118:120:99:3180,229,0
CP000253.1 212829 . A T 3233.06 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.872;DP=124;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.3042;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.29;ReadPosRankSum=1.592;SOR=0.392 GT:AD:DP:GQ:PL 1/1:1,122:123:99:3264,235,0
CP000253.1 212837 . T C 5059.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=1.235 GT:AD:DP:GQ:PL 1/1:0,185:186:99:5088,364,0
CP000253.1 212850 . G A 5469.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4384;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=1.140 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5498,391,0
CP000253.1 212878 . G T 6151.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.926 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6180,436,0
CP000253.1 212927 . G A 6220.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,238:238:99:6249,439,0
CP000253.1 212929 . G A 6015.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4844;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,230:230:99:6044,427,0
CP000253.1 212931 . C A 6056.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4844;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,229:230:99:6085,430,0
CP000253.1 212937 . A T 5969.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.858;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.07;ReadPosRankSum=0.569;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,228:230:99:5998,424,0
CP000253.1 212944 . A G 5970.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3445;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,226:227:99:5999,424,0
CP000253.1 212955 . A T 4992.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.540;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.34;ReadPosRankSum=0.306;SOR=0.197 GT:AD:DP:GQ:PL 1/1:2,195:200:99:5021,361,0
CP000253.1 212956 . A C 5006.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.220;DP=200;Dels=0.01;ExcessHet=3.0103;FS=2.094;HaplotypeScore=24.9807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.16;ReadPosRankSum=0.663;SOR=0.424 GT:AD:DP:GQ:PL 1/1:3,196:199:99:5035,347,0
CP000253.1 212958 . C A 5031.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.093;DP=200;Dels=0.00;ExcessHet=3.0103;FS=2.107;HaplotypeScore=24.9807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.41;ReadPosRankSum=0.708;SOR=0.439 GT:AD:DP:GQ:PL 1/1:3,195:200:99:5060,349,0
CP000253.1 212961 . A G 4974.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.774;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0664;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.87;ReadPosRankSum=1.220;SOR=0.734 GT:AD:DP:GQ:PL 1/1:4,196:200:99:5003,288,0
CP000253.1 212962 . C A 5009.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.719;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0664;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.05;ReadPosRankSum=1.233;SOR=0.734 GT:AD:DP:GQ:PL 1/1:4,196:200:99:5038,330,0
CP000253.1 212965 . T A 5109.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.576;DP=200;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=57.1494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.94;ReadPosRankSum=1.711;SOR=0.745 GT:AD:DP:GQ:PL 1/1:2,195:198:99:5138,367,0
CP000253.1 212966 . T C 5107.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.1920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,197:197:99:5136,367,0
CP000253.1 212968 . A C 5143.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.939;DP=200;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2282;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.98;ReadPosRankSum=0.990;SOR=0.304 GT:AD:DP:GQ:PL 1/1:1,197:198:99:5172,367,0
CP000253.1 213045 . A G 6046.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5422;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6075,436,0
CP000253.1 213053 . C T 6184.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9786;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,242:243:99:6213,445,0
CP000253.1 213153 . A G 6467.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0849;MLEAC=2;MLEAF=1.00;MQ=59.67;MQ0=0;QD=27.41;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,236:236:99:6496,467,0
CP000253.1 213159 . T G 6624.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8261;MLEAC=2;MLEAF=1.00;MQ=59.38;MQ0=0;QD=27.60;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6653,485,0
CP000253.1 213237 . T C 5914.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9880;MLEAC=2;MLEAF=1.00;MQ=57.83;MQ0=0;QD=28.44;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,208:208:99:5943,442,0
CP000253.1 213244 . T A 5589.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5697;MLEAC=2;MLEAF=1.00;MQ=57.64;MQ0=0;QD=29.27;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,191:192:99:5618,418,0
CP000253.1 213245 . C G 5593.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7815;MLEAC=2;MLEAF=1.00;MQ=57.64;MQ0=0;QD=29.13;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,192:192:99:5622,418,0
CP000253.1 213246 . A T 5362.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.759;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6650;MLEAC=2;MLEAF=1.00;MQ=57.56;MQ0=0;MQRankSum=2.432;QD=27.79;ReadPosRankSum=1.733;SOR=0.531 GT:AD:DP:GQ:PL 1/1:1,192:193:99:5391,406,0
CP000253.1 213261 . T C 4696.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=4.204;DP=229;Dels=0.00;ExcessHet=3.0103;FS=3.534;HaplotypeScore=21.5465;MLEAC=1;MLEAF=0.500;MQ=56.14;MQ0=1;MQRankSum=5.442;QD=20.69;ReadPosRankSum=8.002;SOR=0.657 GT:AD:DP:GQ:PL 0/1:39,188:229:99:4725,0,265
CP000253.1 213270 . A G 2281.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.546;DP=137;Dels=0.00;ExcessHet=3.0103;FS=14.225;HaplotypeScore=28.4004;MLEAC=1;MLEAF=0.500;MQ=53.35;MQ0=1;MQRankSum=2.643;QD=16.78;ReadPosRankSum=7.583;SOR=1.402 GT:AD:DP:GQ:PL 0/1:46,90:137:99:2310,0,632
CP000253.1 213274 . C A 2115.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.284;DP=133;Dels=0.00;ExcessHet=3.0103;FS=19.065;HaplotypeScore=27.1607;MLEAC=1;MLEAF=0.500;MQ=53.14;MQ0=1;MQRankSum=2.492;QD=15.91;ReadPosRankSum=8.248;SOR=1.519 GT:AD:DP:GQ:PL 0/1:47,86:133:99:2144,0,686
CP000253.1 213277 . G C 2066.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.064;DP=131;Dels=0.00;ExcessHet=3.0103;FS=10.787;HaplotypeScore=31.5215;MLEAC=1;MLEAF=0.500;MQ=52.51;MQ0=1;MQRankSum=2.746;QD=15.90;ReadPosRankSum=9.448;SOR=1.354 GT:AD:DP:GQ:PL 0/1:47,83:131:99:2095,0,590
CP000253.1 213278 . C A 2057.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.194;DP=131;Dels=0.00;ExcessHet=3.0103;FS=7.155;HaplotypeScore=32.3882;MLEAC=1;MLEAF=0.500;MQ=52.51;MQ0=1;MQRankSum=2.316;QD=15.71;ReadPosRankSum=8.482;SOR=1.172 GT:AD:DP:GQ:PL 0/1:45,86:131:99:2086,0,563
CP000253.1 213280 . A G 2046.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.683;DP=132;Dels=0.00;ExcessHet=3.0103;FS=15.703;HaplotypeScore=34.1489;MLEAC=1;MLEAF=0.500;MQ=52.31;MQ0=2;MQRankSum=2.779;QD=15.51;ReadPosRankSum=9.011;SOR=1.280 GT:AD:DP:GQ:PL 0/1:49,83:132:99:2075,0,686
CP000253.1 213285 . T C 2106.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.558;DP=134;Dels=0.00;ExcessHet=3.0103;FS=15.729;HaplotypeScore=29.6165;MLEAC=1;MLEAF=0.500;MQ=52.43;MQ0=2;MQRankSum=2.416;QD=15.84;ReadPosRankSum=9.525;SOR=1.400 GT:AD:DP:GQ:PL 0/1:51,82:134:99:2135,0,701
CP000253.1 213286 . C A 2061.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.639;DP=134;Dels=0.00;ExcessHet=3.0103;FS=10.387;HaplotypeScore=29.6165;MLEAC=1;MLEAF=0.500;MQ=52.43;MQ0=2;MQRankSum=2.230;QD=15.39;ReadPosRankSum=9.067;SOR=1.219 GT:AD:DP:GQ:PL 0/1:47,87:134:99:2090,0,626
CP000253.1 213287 . A C 1942.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.740;DP=136;Dels=0.00;ExcessHet=3.0103;FS=13.165;HaplotypeScore=28.6862;MLEAC=1;MLEAF=0.500;MQ=52.55;MQ0=2;MQRankSum=2.523;QD=14.29;ReadPosRankSum=8.873;SOR=1.246 GT:AD:DP:GQ:PL 0/1:51,85:136:99:1971,0,655
CP000253.1 213306 . T C 3265.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.509;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=53.8699;MLEAC=2;MLEAF=1.00;MQ=52.35;MQ0=2;MQRankSum=-0.808;QD=23.33;ReadPosRankSum=0.529;SOR=0.789 GT:AD:DP:GQ:PL 1/1:1,139:144:99:3294,256,0
CP000253.1 213309 . G A 2313.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.310;DP=142;Dels=0.00;ExcessHet=3.0103;FS=8.830;HaplotypeScore=64.1874;MLEAC=1;MLEAF=0.500;MQ=52.56;MQ0=2;MQRankSum=0.910;QD=16.29;ReadPosRankSum=5.554;SOR=1.184 GT:AD:DP:GQ:PL 0/1:43,99:142:99:2342,0,548
CP000253.1 213313 . T C 2265.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=4.590;DP=142;Dels=0.01;ExcessHet=3.0103;FS=20.671;HaplotypeScore=56.2340;MLEAC=1;MLEAF=0.500;MQ=52.56;MQ0=2;MQRankSum=1.025;QD=16.78;ReadPosRankSum=4.656;SOR=1.351 GT:AD:DP:GQ:PL 0/1:43,92:141:99:2294,0,573
CP000253.1 213315 . C A 2283.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=5.196;DP=142;Dels=0.00;ExcessHet=3.0103;FS=13.358;HaplotypeScore=55.4567;MLEAC=1;MLEAF=0.500;MQ=52.56;MQ0=2;MQRankSum=0.495;QD=16.20;ReadPosRankSum=2.299;SOR=1.233 GT:AD:DP:GQ:PL 0/1:47,94:142:99:2312,0,537
CP000253.1 213318 . G C 2140.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=4.456;DP=142;Dels=0.00;ExcessHet=3.0103;FS=20.747;HaplotypeScore=74.0662;MLEAC=1;MLEAF=0.500;MQ=52.56;MQ0=2;MQRankSum=0.727;QD=16.34;ReadPosRankSum=2.141;SOR=1.482 GT:AD:DP:GQ:PL 0/1:43,88:142:99:2169,0,554
CP000253.1 213327 . C T 1720.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.836;DP=143;Dels=0.00;ExcessHet=3.0103;FS=9.612;HaplotypeScore=49.6423;MLEAC=1;MLEAF=0.500;MQ=52.38;MQ0=3;MQRankSum=0.927;QD=12.29;ReadPosRankSum=0.088;SOR=1.381 GT:AD:DP:GQ:PL 0/1:59,81:143:99:1749,0,885
CP000253.1 213333 . G A 3698.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.4884;MLEAC=2;MLEAF=1.00;MQ=52.38;MQ0=3;QD=25.87;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3727,286,0
CP000253.1 213336 . T C 2023.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.346;DP=143;Dels=0.00;ExcessHet=3.0103;FS=23.565;HaplotypeScore=34.6959;MLEAC=1;MLEAF=0.500;MQ=52.38;MQ0=3;MQRankSum=1.309;QD=14.46;ReadPosRankSum=-1.072;SOR=1.438 GT:AD:DP:GQ:PL 0/1:53,87:143:99:2052,0,853
CP000253.1 213342 . C T 1855.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.365;DP=148;Dels=0.00;ExcessHet=3.0103;FS=29.955;HaplotypeScore=14.7418;MLEAC=1;MLEAF=0.500;MQ=52.24;MQ0=3;MQRankSum=1.167;QD=12.71;ReadPosRankSum=-2.544;SOR=1.515 GT:AD:DP:GQ:PL 0/1:58,88:148:99:1884,0,803
CP000253.1 213345 . T C 3818.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5300;MLEAC=2;MLEAF=1.00;MQ=52.30;MQ0=3;QD=25.80;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3847,295,0
CP000253.1 213363 . C T 3811.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.661;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.2274;MLEAC=2;MLEAF=1.00;MQ=52.04;MQ0=3;MQRankSum=1.622;QD=24.75;ReadPosRankSum=-1.369;SOR=0.309 GT:AD:DP:GQ:PL 1/1:1,153:155:99:3840,298,0
CP000253.1 213366 . C T 3473.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.813;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.3249;MLEAC=2;MLEAF=1.00;MQ=51.80;MQ0=3;MQRankSum=1.251;QD=23.16;ReadPosRankSum=-1.777;SOR=0.952 GT:AD:DP:GQ:PL 1/1:2,148:155:99:3502,223,0
CP000253.1 213378 . C T 790.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.030;DP=238;Dels=0.00;ExcessHet=3.0103;FS=30.314;HaplotypeScore=154.5444;MLEAC=1;MLEAF=0.500;MQ=50.61;MQ0=4;MQRankSum=0.177;QD=3.34;ReadPosRankSum=10.008;SOR=1.368 GT:AD:DP:GQ:PL 0/1:174,63:238:99:819,0,3638
CP000253.1 213381 . A T 1053.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.213;DP=219;Dels=0.00;ExcessHet=3.0103;FS=7.200;HaplotypeScore=209.1621;MLEAC=1;MLEAF=0.500;MQ=50.01;MQ0=4;MQRankSum=0.914;QD=6.71;ReadPosRankSum=4.394;SOR=1.234 GT:AD:DP:GQ:PL 0/1:85,72:219:99:1082,0,1478
CP000253.1 213387 . T C 4890.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=216.9385;MLEAC=2;MLEAF=1.00;MQ=50.01;MQ0=4;QD=22.85;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,214:219:99:4919,376,0
CP000253.1 213390 . G A 2975.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.499;DP=218;Dels=0.00;ExcessHet=3.0103;FS=30.927;HaplotypeScore=171.3158;MLEAC=1;MLEAF=0.500;MQ=49.99;MQ0=4;MQRankSum=-0.299;QD=13.78;ReadPosRankSum=-8.749;SOR=1.029 GT:AD:DP:GQ:PL 0/1:64,152:218:99:3004,0,818
CP000253.1 213399 . C A 2459.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.359;DP=233;Dels=0.00;ExcessHet=3.0103;FS=8.667;HaplotypeScore=152.9312;MLEAC=1;MLEAF=0.500;MQ=49.71;MQ0=5;MQRankSum=0.372;QD=10.60;ReadPosRankSum=7.636;SOR=0.592 GT:AD:DP:GQ:PL 0/1:88,144:233:99:2488,0,1219
CP000253.1 213408 . C T 1421.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.780;DP=237;Dels=0.00;ExcessHet=3.0103;FS=6.733;HaplotypeScore=143.7151;MLEAC=1;MLEAF=0.500;MQ=49.70;MQ0=5;MQRankSum=0.025;QD=6.10;ReadPosRankSum=-5.727;SOR=0.987 GT:AD:DP:GQ:PL 0/1:150,83:237:99:1450,0,2379
CP000253.1 213409 . A G 2450.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.498;DP=237;Dels=0.00;ExcessHet=3.0103;FS=1.606;HaplotypeScore=145.3199;MLEAC=1;MLEAF=0.500;MQ=49.70;MQ0=5;MQRankSum=0.834;QD=10.38;ReadPosRankSum=1.101;SOR=0.701 GT:AD:DP:GQ:PL 0/1:100,136:237:99:2479,0,1251
CP000253.1 213417 . C T 1173.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.154;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.493;HaplotypeScore=113.7073;MLEAC=1;MLEAF=0.500;MQ=49.82;MQ0=5;MQRankSum=-1.242;QD=5.04;ReadPosRankSum=-0.594;SOR=0.644 GT:AD:DP:GQ:PL 0/1:141,92:241:99:1202,0,2590
CP000253.1 213423 . T C 1063.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.869;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.503;HaplotypeScore=53.3134;MLEAC=1;MLEAF=0.500;MQ=49.95;MQ0=5;MQRankSum=-1.206;QD=4.55;ReadPosRankSum=-2.014;SOR=0.766 GT:AD:DP:GQ:PL 0/1:150,84:241:99:1092,0,2829
CP000253.1 213440 . G C 4112.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.267;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=47.5384;MLEAC=2;MLEAF=1.00;MQ=49.74;MQ0=2;MQRankSum=0.429;QD=22.85;ReadPosRankSum=-0.612;SOR=0.393 GT:AD:DP:GQ:PL 1/1:2,178:193:99:4141,310,0
CP000253.1 213444 . C T 4532.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=51.5407;MLEAC=2;MLEAF=1.00;MQ=49.74;MQ0=2;MQRankSum=-0.912;QD=23.98;ReadPosRankSum=1.361;SOR=0.292 GT:AD:DP:GQ:PL 1/1:1,188:193:99:4561,343,0
CP000253.1 213447 . C T 4005.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.672;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=49.7525;MLEAC=2;MLEAF=1.00;MQ=49.70;MQ0=2;MQRankSum=-1.047;QD=21.42;ReadPosRankSum=0.229;SOR=0.460 GT:AD:DP:GQ:PL 1/1:3,184:191:99:4034,307,0
CP000253.1 213459 . T C 2299.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.026;DP=213;Dels=0.00;ExcessHet=3.0103;FS=3.937;HaplotypeScore=77.7127;MLEAC=1;MLEAF=0.500;MQ=49.95;MQ0=3;MQRankSum=-0.219;QD=10.80;ReadPosRankSum=-0.370;SOR=0.871 GT:AD:DP:GQ:PL 0/1:89,124:213:99:2328,0,1222
CP000253.1 213462 . C T 1317.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.029;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.663;HaplotypeScore=109.1254;MLEAC=1;MLEAF=0.500;MQ=50.30;MQ0=3;MQRankSum=0.964;QD=7.71;ReadPosRankSum=0.861;SOR=0.935 GT:AD:DP:GQ:PL 0/1:89,82:210:99:1346,0,1524
CP000253.1 213471 . A G 1733.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.551;DP=211;Dels=0.00;ExcessHet=3.0103;FS=1.078;HaplotypeScore=166.2616;MLEAC=1;MLEAF=0.500;MQ=50.35;MQ0=3;MQRankSum=-0.756;QD=8.30;ReadPosRankSum=-0.674;SOR=0.810 GT:AD:DP:GQ:PL 0/1:103,106:211:99:1762,0,1823
CP000253.1 213475 . C T 15.88 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.464;DP=212;Dels=0.00;ExcessHet=3.0103;FS=3.658;HaplotypeScore=129.6627;MLEAC=1;MLEAF=0.500;MQ=50.24;MQ0=3;MQRankSum=-1.470;QD=0.08;ReadPosRankSum=-2.208;SOR=1.784 GT:AD:DP:GQ:PL 0/1:182,24:212:44:44,0,3679
CP000253.1 213477 . A C 21.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.498;DP=212;Dels=0.00;ExcessHet=3.0103;FS=4.968;HaplotypeScore=125.3698;MLEAC=1;MLEAF=0.500;MQ=50.24;MQ0=3;MQRankSum=-0.558;QD=0.10;ReadPosRankSum=-1.753;SOR=1.745 GT:AD:DP:GQ:PL 0/1:183,27:212:50:50,0,3656
CP000253.1 213480 . C A 4163.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=4.122;DP=214;Dels=0.00;ExcessHet=3.0103;FS=4.865;HaplotypeScore=171.2331;MLEAC=1;MLEAF=0.500;MQ=50.46;MQ0=3;MQRankSum=-1.189;QD=22.27;ReadPosRankSum=4.056;SOR=0.188 GT:AD:DP:GQ:PL 1/1:11,176:214:99:4160,233,0
CP000253.1 213490 . A G 602.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.214;DP=221;Dels=0.00;ExcessHet=3.0103;FS=11.106;HaplotypeScore=72.7118;MLEAC=1;MLEAF=0.500;MQ=50.78;MQ0=3;MQRankSum=0.157;QD=2.75;ReadPosRankSum=-4.560;SOR=1.640 GT:AD:DP:GQ:PL 0/1:172,47:221:99:631,0,3277
CP000253.1 213504 . C T 1398.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.745;DP=219;Dels=0.00;ExcessHet=3.0103;FS=6.835;HaplotypeScore=49.5705;MLEAC=1;MLEAF=0.500;MQ=50.89;MQ0=3;MQRankSum=-0.016;QD=6.57;ReadPosRankSum=0.411;SOR=0.479 GT:AD:DP:GQ:PL 0/1:124,89:219:99:1427,0,2158
CP000253.1 213525 . C T 4601.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.352;DP=192;Dels=0.00;ExcessHet=3.0103;FS=3.625;HaplotypeScore=39.5399;MLEAC=2;MLEAF=1.00;MQ=51.12;MQ0=3;MQRankSum=0.576;QD=24.22;ReadPosRankSum=-0.624;SOR=0.725 GT:AD:DP:GQ:PL 1/1:2,188:192:99:4630,358,0
CP000253.1 213534 . G A 4490.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.423;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=51.0164;MLEAC=2;MLEAF=1.00;MQ=51.45;MQ0=3;MQRankSum=-1.129;QD=24.67;ReadPosRankSum=-0.453;SOR=0.841 GT:AD:DP:GQ:PL 1/1:2,180:183:99:4519,346,0
CP000253.1 213540 . C T 1787.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.051;DP=175;Dels=0.00;ExcessHet=3.0103;FS=2.220;HaplotypeScore=50.7652;MLEAC=1;MLEAF=0.500;MQ=51.20;MQ0=4;MQRankSum=-0.343;QD=10.27;ReadPosRankSum=0.975;SOR=0.952 GT:AD:DP:GQ:PL 0/1:81,93:175:99:1816,0,1294
CP000253.1 213543 . A C 1295.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.247;DP=149;Dels=0.00;ExcessHet=3.0103;FS=3.725;HaplotypeScore=53.6171;MLEAC=1;MLEAF=0.500;MQ=50.84;MQ0=3;MQRankSum=-1.192;QD=8.81;ReadPosRankSum=1.687;SOR=1.266 GT:AD:DP:GQ:PL 0/1:69,78:149:99:1324,0,1062
CP000253.1 213556 . T C 1696.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.206;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=47.8576;MLEAC=1;MLEAF=0.500;MQ=51.20;MQ0=2;MQRankSum=-0.091;QD=12.21;ReadPosRankSum=1.607;SOR=0.876 GT:AD:DP:GQ:PL 0/1:56,83:144:99:1725,0,942
CP000253.1 213558 . C A 1592.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.757;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.753;HaplotypeScore=46.1517;MLEAC=1;MLEAF=0.500;MQ=51.06;MQ0=2;MQRankSum=-0.813;QD=11.30;ReadPosRankSum=2.134;SOR=1.179 GT:AD:DP:GQ:PL 0/1:61,80:142:99:1621,0,1043
CP000253.1 213561 . G A 1762.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.211;DP=144;Dels=0.00;ExcessHet=3.0103;FS=1.399;HaplotypeScore=74.0761;MLEAC=1;MLEAF=0.500;MQ=51.20;MQ0=2;MQRankSum=-0.200;QD=12.50;ReadPosRankSum=1.484;SOR=0.886 GT:AD:DP:GQ:PL 0/1:56,85:144:99:1791,0,1011
CP000253.1 213570 . T C 3177.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=79.0552;MLEAC=2;MLEAF=1.00;MQ=50.87;MQ0=2;QD=24.63;SOR=1.347 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3206,250,0
CP000253.1 213571 . A G 2081.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.064;DP=130;Dels=0.00;ExcessHet=3.0103;FS=13.903;HaplotypeScore=79.0552;MLEAC=1;MLEAF=0.500;MQ=50.87;MQ0=2;MQRankSum=2.786;QD=16.65;ReadPosRankSum=0.900;SOR=1.821 GT:AD:DP:GQ:PL 0/1:34,91:130:99:2110,0,336
CP000253.1 213579 . T C 1201.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.119;DP=131;Dels=0.00;ExcessHet=3.0103;FS=7.145;HaplotypeScore=65.4231;MLEAC=1;MLEAF=0.500;MQ=50.57;MQ0=2;MQRankSum=3.190;QD=9.39;ReadPosRankSum=1.843;SOR=1.846 GT:AD:DP:GQ:PL 0/1:73,55:131:99:1230,0,1287
CP000253.1 213585 . C T 1571.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.614;DP=120;Dels=0.00;ExcessHet=3.0103;FS=7.507;HaplotypeScore=32.4267;MLEAC=1;MLEAF=0.500;MQ=51.19;MQ0=2;MQRankSum=0.856;QD=13.43;ReadPosRankSum=1.119;SOR=1.471 GT:AD:DP:GQ:PL 0/1:42,75:120:99:1600,0,843
CP000253.1 213588 . T C 3059.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.9577;MLEAC=2;MLEAF=1.00;MQ=51.28;MQ0=2;QD=26.61;SOR=1.630 GT:AD:DP:GQ:PL 1/1:0,115:117:99:3088,238,0
CP000253.1 213604 . G A 385.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.203;DP=87;Dels=0.00;ExcessHet=3.0103;FS=14.221;HaplotypeScore=6.3561;MLEAC=1;MLEAF=0.500;MQ=53.07;MQ0=2;MQRankSum=-2.340;QD=4.43;ReadPosRankSum=-2.653;SOR=0.112 GT:AD:DP:GQ:PL 0/1:61,26:87:99:414,0,1539
CP000253.1 213643 . G A 1784.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=56.99;MQ0=0;QD=31.31;SOR=2.262 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1813,135,0
CP000253.1 213647 . G A 1767.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=56.94;MQ0=0;QD=31.57;SOR=2.221 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1796,132,0
CP000253.1 213681 . A G 1080.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.42;MQ0=0;QD=30.02;SOR=1.949 GT:AD:DP:GQ:PL 1/1:0,36:36:81:1109,81,0
CP000253.1 213682 . C A 1084.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.42;MQ0=0;QD=30.13;SOR=1.949 GT:AD:DP:GQ:PL 1/1:0,36:36:81:1113,81,0
CP000253.1 213687 . C T 1087.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.42;MQ0=0;QD=30.22;SOR=1.949 GT:AD:DP:GQ:PL 1/1:0,36:36:81:1116,81,0
CP000253.1 213694 . T A 1080.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.42;MQ0=0;QD=30.02;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,36:36:81:1109,81,0
CP000253.1 213894 . G A 1200.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:84:1229,84,0
CP000253.1 214213 . A C 2630.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2659,184,0
CP000253.1 214214 . A T 2667.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2696,187,0
CP000253.1 214258 . T C 3585.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2711;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3614,253,0
CP000253.1 214369 . G C 3586.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.791;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1354;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;MQRankSum=0.000;QD=23.91;ReadPosRankSum=-1.328;SOR=0.508 GT:AD:DP:GQ:PL 1/1:1,149:151:99:3615,256,0
CP000253.1 214598 . A T 5204.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,204:205:99:5233,370,0
CP000253.1 214630 . G T 4659.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4146;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,195:195:99:4688,328,0
CP000253.1 214702 . T C 4558.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4587,328,0
CP000253.1 214710 . T C 4709.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4738,337,0
CP000253.1 214846 . T C 3957.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.43;ReadPosRankSum=0.706;SOR=0.282 GT:AD:DP:GQ:PL 1/1:1,161:162:99:3986,289,0
CP000253.1 214847 . T C 3995.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,156:157:99:4024,289,0
CP000253.1 215233 . G T 3544.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.450;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.11;ReadPosRankSum=0.033;SOR=0.764 GT:AD:DP:GQ:PL 1/1:2,145:147:99:3573,256,0
CP000253.1 215577 . G T 2419.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9309;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2448,175,0
CP000253.1 215634 . A G 3072.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3101,220,0
CP000253.1 215664 . A C 3377.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.750;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0516;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.13;ReadPosRankSum=-1.535;SOR=0.294 GT:AD:DP:GQ:PL 1/1:1,139:141:99:3406,244,0
CP000253.1 216006 . A G 3778.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.871;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.70;ReadPosRankSum=0.781;SOR=0.281 GT:AD:DP:GQ:PL 1/1:1,152:153:99:3807,271,0
CP000253.1 216024 . G T 3953.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3982,283,0
CP000253.1 216249 . G A 5211.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3059;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.817 GT:AD:DP:GQ:PL 1/1:0,204:204:99:5240,373,0
CP000253.1 216267 . A G 5390.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5419,379,0
CP000253.1 216306 . C G 5147.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0025;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,211:213:99:5176,361,0
CP000253.1 216446 . T C 5504.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.909;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.7347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.93;ReadPosRankSum=-0.911;SOR=0.407 GT:AD:DP:GQ:PL 1/1:1,229:232:99:5533,385,0
CP000253.1 216739 . G A 3515.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.905;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9570;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.48;ReadPosRankSum=0.364;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,137:138:99:3544,253,0
CP000253.1 216740 . T C 3718.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3747,268,0
CP000253.1 216948 . T C 4827.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.598;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9899;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=23.90;ReadPosRankSum=1.021;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,201:204:99:4856,343,0
CP000253.1 217014 . A G 4738.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,192:194:99:4767,337,0
CP000253.1 217020 . C G 4591.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4049;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,191:191:99:4620,325,0
CP000253.1 217088 . T A 4491.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,172:174:99:4520,322,0
CP000253.1 217194 . C T 4981.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.4510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,198:200:99:5010,355,0
CP000253.1 217227 . A G 5683.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8712;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,227:228:99:5712,403,0
CP000253.1 217380 . G A 6191.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8107;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,242:243:99:6220,436,0
CP000253.1 217525 . G A 5573.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.627;DP=225;Dels=0.00;ExcessHet=3.0103;FS=3.502;HaplotypeScore=21.4504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.88;ReadPosRankSum=0.511;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,223:225:99:5602,360,0
CP000253.1 217659 . A G 2575.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.712;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8550;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.77;ReadPosRankSum=1.100;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,103:105:99:2604,190,0
CP000253.1 217683 . T C 2064.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.558;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8741;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.58;ReadPosRankSum=-1.952;SOR=1.085 GT:AD:DP:GQ:PL 1/1:2,82:84:99:2093,112,0
CP000253.1 218432 . G T 3669.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.840;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5568;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.59;ReadPosRankSum=1.092;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,137:138:99:3698,265,0
CP000253.1 218533 . C T 4080.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.790;DP=156;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8621;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.33;ReadPosRankSum=0.034;SOR=0.264 GT:AD:DP:GQ:PL 1/1:1,154:155:99:4109,260,0
CP000253.1 219242 . C T 2987.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=1.140 GT:AD:DP:GQ:PL 1/1:0,116:117:99:3016,211,0
CP000253.1 219376 . T C 3892.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=1.106 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3921,280,0
CP000253.1 219515 . G A 4164.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.22;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,153:154:99:4193,301,0
CP000253.1 219589 . T C 5206.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,197:199:99:5235,373,0
CP000253.1 219623 . T A 5117.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,197:198:99:5146,367,0
CP000253.1 220178 . A G 6779.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1783;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.34;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6808,494,0
CP000253.1 220935 . T C 4247.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3447;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,161:162:99:4276,313,0
CP000253.1 220967 . T C 4566.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7378;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,177:178:99:4595,331,0
CP000253.1 220981 . G A 4543.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6719;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4572,325,0
CP000253.1 221076 . G A 5076.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5909;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,203:203:99:5105,361,0
CP000253.1 221360 . A G 4960.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.503;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.2005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=1.970;SOR=0.725 GT:AD:DP:GQ:PL 1/1:4,187:193:99:4989,361,0
CP000253.1 221394 . A G 5140.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.835;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.45;ReadPosRankSum=1.698;SOR=0.500 GT:AD:DP:GQ:PL 1/1:1,201:202:99:5169,373,0
CP000253.1 221568 . T C 6516.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.774;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.029;HaplotypeScore=46.9311;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=9.092;QD=26.17;ReadPosRankSum=-0.036;SOR=0.213 GT:AD:DP:GQ:PL 1/1:3,246:250:99:6545,437,0
CP000253.1 221883 . C A 6556.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.0856;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6585,473,0
CP000253.1 222078 . A G 5570.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.059 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5599,400,0
CP000253.1 222150 . A G 4266.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1412;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.25;ReadPosRankSum=1.128;SOR=0.961 GT:AD:DP:GQ:PL 1/1:1,168:170:99:4295,307,0
CP000253.1 222180 . A T 3471.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.710;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.28;ReadPosRankSum=1.636;SOR=0.438 GT:AD:DP:GQ:PL 1/1:1,142:143:99:3500,250,0
CP000253.1 222467 . G A 734.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3561;MLEAC=2;MLEAF=1.00;MQ=59.60;MQ0=0;QD=25.34;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:763,54,0
CP000253.1 222473 . C T 606.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4620;MLEAC=2;MLEAF=1.00;MQ=59.53;MQ0=0;QD=25.28;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:25:45:635,45,0
CP000253.1 222543 . T C 341.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.656;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1370;MLEAC=2;MLEAF=1.00;MQ=59.22;MQ0=0;MQRankSum=4.009;QD=22.79;ReadPosRankSum=-0.582;SOR=0.643 GT:AD:DP:GQ:PL 1/1:1,14:15:27:370,27,0
CP000253.1 222574 . T G 184.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7791;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:213,15,0
CP000253.1 222596 . T C 142.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:170,12,0
CP000253.1 222836 . G A 2711.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,109:110:99:2740,190,0
CP000253.1 222853 . T C 2852.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4164;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.58;ReadPosRankSum=-0.902;SOR=0.550 GT:AD:DP:GQ:PL 1/1:1,120:121:99:2881,202,0
CP000253.1 222878 . A G 2882.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2911,202,0
CP000253.1 222891 . A C 2854.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4602;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2883,202,0
CP000253.1 222943 . G C 2977.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3006,208,0
CP000253.1 222983 . C T 2573.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,115:116:99:2602,178,0
CP000253.1 223162 . A G 1658.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:71:99:1687,120,0
CP000253.1 223570 . A G 1384.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2562;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1413,102,0
CP000253.1 223746 . T G 1412.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1441,102,0
CP000253.1 224077 . C T 230.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:259,18,0
CP000253.1 224526 . T A 1808.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2991;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1837,129,0
CP000253.1 224529 . A G 1797.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1826,129,0
CP000253.1 224535 . A G 1826.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1855,129,0
CP000253.1 224752 . A G 1598.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9135;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1627,114,0
CP000253.1 225006 . T A 767.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:57:796,57,0
CP000253.1 225044 . C T 1108.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:78:1137,78,0
CP000253.1 225242 . C A 1823.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1852,126,0
CP000253.1 225851 . T C 177.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:206,15,0
CP000253.1 226765 . A G 2882.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2911,202,0
CP000253.1 226781 . C T 2796.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2825,196,0
CP000253.1 226782 . A G 2738.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,112:113:99:2767,196,0
CP000253.1 226835 . G A 3616.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7339;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.79;SOR=1.256 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3645,262,0
CP000253.1 226944 . A T 4531.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6082;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.98;ReadPosRankSum=0.972;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,188:190:99:4560,319,0
CP000253.1 226959 . A G 4478.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1931;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,190:193:99:4507,316,0
CP000253.1 226962 . A G 4504.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1311;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,194:195:99:4533,319,0
CP000253.1 227385 . G A 2798.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,111:113:99:2827,199,0
CP000253.1 227412 . G C 2941.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4287;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2970,211,0
CP000253.1 227423 . T G 3162.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8741;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3191,226,0
CP000253.1 227433 . T A 3168.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3197,223,0
CP000253.1 227448 . A G 2975.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.811;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.80;ReadPosRankSum=-0.795;SOR=0.468 GT:AD:DP:GQ:PL 1/1:1,119:120:99:3004,211,0
CP000253.1 227451 . G T 2944.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.903;DP=117;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.39;ReadPosRankSum=-0.807;SOR=0.477 GT:AD:DP:GQ:PL 1/1:1,115:116:99:2973,211,0
CP000253.1 227468 . T C 3070.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3099,217,0
CP000253.1 227504 . G A 3578.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2013;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3607,250,0
CP000253.1 227508 . G A 3513.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,147:148:99:3542,247,0
CP000253.1 227574 . T A 3875.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.668;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.15;ReadPosRankSum=1.875;SOR=0.126 GT:AD:DP:GQ:PL 1/1:2,173:175:99:3904,268,0
CP000253.1 227787 . A C 943.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5447;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:39:69:972,69,0
CP000253.1 227945 . A C 601.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6991;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:45:630,45,0
CP000253.1 227986 . C T 477.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:20:36:506,36,0
CP000253.1 228061 . T C 445.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:474,33,0
CP000253.1 228301 . T C 1414.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1443,102,0
CP000253.1 229135 . G T 2561.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2590,181,0
CP000253.1 229314 . C T 1187.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:47:87:1216,87,0
CP000253.1 229384 . G A 2674.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2790;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=1.029 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2703,193,0
CP000253.1 229505 . C T 3501.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3530,247,0
CP000253.1 229754 . G T 4399.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4428,313,0
CP000253.1 232099 . G A 4711.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6720;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,193:193:99:4740,331,0
CP000253.1 232503 . G A 516.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.30;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:42:545,42,0
CP000253.1 232506 . T G 374.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.23;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:30:403,30,0
CP000253.1 232510 . G A 414.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.56;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:33:443,33,0
CP000253.1 232516 . A T 408.77 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:33:437,33,0
CP000253.1 232576 . C T 514.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:543,39,0
CP000253.1 232595 . C T 463.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:492,36,0
CP000253.1 232697 . A G 2280.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.16;SOR=1.581 GT:AD:DP:GQ:PL 1/1:0,81:82:99:2309,169,0
CP000253.1 232768 . A G 3318.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3580;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.299 GT:AD:DP:GQ:PL 1/1:0,127:129:99:3347,244,0
CP000253.1 233093 . C T 6257.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5232;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=26.29;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,238:239:99:6286,454,0
CP000253.1 233184 . A G 6409.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5681;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.95;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,247:249:99:6438,460,0
CP000253.1 233216 . A G 6050.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,242:245:99:6079,433,0
CP000253.1 233558 . G T 1988.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,79:80:99:2017,141,0
CP000253.1 233633 . A G 1914.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1943,135,0
CP000253.1 233644 . G A 1775.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1804,126,0
CP000253.1 235030 . G A 4250.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.935;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=0.436;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,170:171:99:4279,301,0
CP000253.1 235114 . A G 3790.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2301;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3819,271,0
CP000253.1 235180 . A G 3613.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3642,256,0
CP000253.1 235208 . C T 3159.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3188,226,0
CP000253.1 235264 . A G 2585.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8192;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2614,190,0
CP000253.1 235282 . A G 2481.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.914;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.12;ReadPosRankSum=-1.551;SOR=0.399 GT:AD:DP:GQ:PL 1/1:1,94:96:99:2510,178,0
CP000253.1 235415 . A G 763.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:57:792,57,0
CP000253.1 235526 . A G 904.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:66:933,66,0
CP000253.1 235650 . G A 1341.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1370,96,0
CP000253.1 235660 . T A 1430.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1459,102,0
CP000253.1 235741 . A G 2393.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2422,169,0
CP000253.1 235757 . T G 2574.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2603,184,0
CP000253.1 235783 . T C 2849.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2878,205,0
CP000253.1 236058 . G A 3549.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6544;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3578,259,0
CP000253.1 236320 . A G 4192.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2981;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,158:161:99:4221,301,0
CP000253.1 236397 . T G 4288.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.832;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.64;ReadPosRankSum=0.334;SOR=0.233 GT:AD:DP:GQ:PL 1/1:1,160:161:99:4317,310,0
CP000253.1 236406 . T C 4103.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.383;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2198;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=-0.957;SOR=0.116 GT:AD:DP:GQ:PL 1/1:2,156:160:99:4132,275,0
CP000253.1 236409 . A G 4100.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4129,295,0
CP000253.1 236743 . G A 6485.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.622;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.9195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.37;ReadPosRankSum=-0.161;SOR=0.292 GT:AD:DP:GQ:PL 1/1:1,236:238:99:6514,481,0
CP000253.1 236769 . A G 6608.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.9973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.65;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6637,482,0
CP000253.1 236865 . G T 6237.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.67;ReadPosRankSum=-1.604;SOR=0.636 GT:AD:DP:GQ:PL 1/1:1,242:244:99:6266,445,0
CP000253.1 236956 . C T 5010.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9851;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=1.115 GT:AD:DP:GQ:PL 1/1:0,195:196:99:5039,355,0
CP000253.1 237254 . T C 3493.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3522,247,0
CP000253.1 237272 . T G 3650.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.780;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.68;ReadPosRankSum=0.908;SOR=0.839 GT:AD:DP:GQ:PL 1/1:2,159:161:99:3679,259,0
CP000253.1 237377 . A T 4158.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4187,292,0
CP000253.1 237386 . G T 4185.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.001;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7607;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=24.92;ReadPosRankSum=-0.980;SOR=0.242 GT:AD:DP:GQ:PL 1/1:1,167:168:99:4214,295,0
CP000253.1 237608 . C G 3354.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,137:142:99:3383,244,0
CP000253.1 237611 . T C 3449.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3478,247,0
CP000253.1 237614 . A T 3296.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6388;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,136:138:99:3325,238,0
CP000253.1 237674 . A G 3701.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.9012;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3730,265,0
CP000253.1 237878 . G A 4824.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4853,346,0
CP000253.1 237885 . T A 4616.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4697;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4645,331,0
CP000253.1 238121 . C T 3602.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6147;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3631,259,0
CP000253.1 238275 . T C 2667.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6950;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2696,190,0
CP000253.1 238382 . G A 2952.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7055;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,117:118:99:2981,211,0
CP000253.1 238443 . A G 3270.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6919;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3299,235,0
CP000253.1 238643 . A G 4313.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.3320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,180:182:99:4342,307,0
CP000253.1 239468 . T C 2027.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2056,144,0
CP000253.1 240181 . T C 1878.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1907,132,0
CP000253.1 240520 . C A 1932.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1961,135,0
CP000253.1 240797 . A G 5351.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,219:220:99:5380,382,0
CP000253.1 240809 . A G 5337.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2570;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5366,379,0
CP000253.1 240851 . T C 5687.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9915;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,237:239:99:5716,400,0
CP000253.1 240863 . G A 5594.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.992;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3903;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.71;ReadPosRankSum=1.506;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,235:237:99:5623,391,0
CP000253.1 240896 . A G 5681.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2408;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,243:244:99:5710,397,0
CP000253.1 240929 . T C 5701.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,243:244:99:5730,397,0
CP000253.1 241129 . C A 3315.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3344,235,0
CP000253.1 241210 . C T 2022.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2051,144,0
CP000253.1 242440 . A C 3222.65 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3251,229,0
CP000253.1 243208 . T A 2437.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1093;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2466,172,0
CP000253.1 243239 . G A 2828.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,123:123:99:2857,196,0
CP000253.1 243271 . A C 2974.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=130;Dels=0.00;ExcessHet=3.0103;FS=3.078;HaplotypeScore=2.6961;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.88;ReadPosRankSum=1.719;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3003,207,0
CP000253.1 243299 . G A 3201.82 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3231,220,0
CP000253.1 244024 . C T 2394.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.880;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9994;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=1.716;SOR=0.901 GT:AD:DP:GQ:PL 1/1:1,95:97:99:2423,172,0
CP000253.1 244312 . A C 2746.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2775,196,0
CP000253.1 246645 . T C 1470.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.748;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.98;ReadPosRankSum=0.271;SOR=0.374 GT:AD:DP:GQ:PL 1/1:1,63:64:99:1499,105,0
CP000253.1 246648 . G T 1535.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.900;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.00;ReadPosRankSum=0.271;SOR=0.374 GT:AD:DP:GQ:PL 1/1:1,63:64:99:1564,108,0
CP000253.1 246654 . T G 1576.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1605,111,0
CP000253.1 246657 . C T 1566.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1595,111,0
CP000253.1 246663 . T C 1552.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8271;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1581,111,0
CP000253.1 246672 . C A 1795.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1824,126,0
CP000253.1 246687 . C T 1820.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1849,126,0
CP000253.1 246693 . C T 2128.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2157,150,0
CP000253.1 246893 . T A 1621.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1650,114,0
CP000253.1 248247 . T C 3270.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,136:137:99:3299,232,0
CP000253.1 249290 . A G 1691.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.17;SOR=1.278 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1720,123,0
CP000253.1 249395 . T C 5251.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.710;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.66;ReadPosRankSum=0.185;SOR=0.164 GT:AD:DP:GQ:PL 1/1:2,211:214:99:5280,370,0
CP000253.1 249449 . C T 5941.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2284;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,248:250:99:5970,421,0
CP000253.1 249456 . A G 6169.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7069;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6198,436,0
CP000253.1 249533 . A T 6102.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7457;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6131,427,0
CP000253.1 249539 . T G 6037.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=249;Dels=0.00;ExcessHet=3.0103;FS=3.117;HaplotypeScore=13.5339;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.35;ReadPosRankSum=-0.112;SOR=0.314 GT:AD:DP:GQ:PL 1/1:1,247:249:99:6066,430,0
CP000253.1 249674 . G A 4609.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.922;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.90;ReadPosRankSum=1.733;SOR=0.656 GT:AD:DP:GQ:PL 1/1:1,177:178:99:4638,325,0
CP000253.1 249765 . A G 3215.74 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9908;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3244,226,0
CP000253.1 250124 . G A 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 250221 . T A 1721.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1750,120,0
CP000253.1 250304 . A G 2426.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6908;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2455,172,0
CP000253.1 250320 . G A 2505.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2534,175,0
CP000253.1 250322 . G T 2461.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.941;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.79;ReadPosRankSum=0.754;SOR=0.434 GT:AD:DP:GQ:PL 1/1:1,107:108:99:2490,172,0
CP000253.1 250343 . A G 2561.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0633;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.47;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2590,178,0
CP000253.1 250359 . C G 2490.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2519,172,0
CP000253.1 250373 . C T 2401.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9409;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:106:99:2430,169,0
CP000253.1 250385 . A G 2271.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2300,157,0
CP000253.1 250430 . C G 1384.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2743;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.33;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:63:96:1413,96,0
CP000253.1 250436 . T C 867.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.1024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:38:63:896,63,0
CP000253.1 250437 . C T 852.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.1024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:63:881,63,0
CP000253.1 250439 . A G 775.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.195;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.1024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.41;ReadPosRankSum=0.091;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,37:39:50:804,50,0
CP000253.1 250468 . A T 751.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:54:780,54,0
CP000253.1 250469 . T A 734.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:54:763,54,0
CP000253.1 250475 . G A 700.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:51:729,51,0
CP000253.1 250477 . C T 704.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:30:51:733,51,0
CP000253.1 250483 . G A 682.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.02;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:711,51,0
CP000253.1 250493 . C T 650.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.646;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.69;ReadPosRankSum=-1.618;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,29:30:48:679,48,0
CP000253.1 250505 . G A 585.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:614,42,0
CP000253.1 250513 . C A 541.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:570,39,0
CP000253.1 250570 . G A 614.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.73;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:45:643,45,0
CP000253.1 250583 . T C 473.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:36:502,36,0
CP000253.1 250584 . A G 561.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.09;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:42:590,42,0
CP000253.1 250621 . G A 995.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1024,75,0
CP000253.1 250628 . C T 1599.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1628,114,0
CP000253.1 250629 . T A 1615.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1644,114,0
CP000253.1 250647 . G A 1794.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1823,126,0
CP000253.1 250662 . T C 1818.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1847,129,0
CP000253.1 250665 . G A 1843.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1872,129,0
CP000253.1 250668 . A T 2233.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2262,157,0
CP000253.1 250674 . T C 2253.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2282,157,0
CP000253.1 250683 . T C 2324.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2353,163,0
CP000253.1 250686 . C T 2317.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5261;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.50;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2346,163,0
CP000253.1 250711 . G T 2787.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.112;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0711;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.85;ReadPosRankSum=1.687;SOR=0.302 GT:AD:DP:GQ:PL 1/1:1,121:123:99:2816,193,0
CP000253.1 250761 . C T 3105.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3183;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3134,214,0
CP000253.1 250792 . T C 2979.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3008,205,0
CP000253.1 250794 . A T 2933.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:2962,202,0
CP000253.1 250797 . T C 2888.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,129:130:99:2917,199,0
CP000253.1 250818 . A G 2845.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8583;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,126:126:99:2874,196,0
CP000253.1 250840 . T G 2492.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2521,172,0
CP000253.1 250860 . A T 1673.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1702,117,0
CP000253.1 250899 . G A 1399.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5016;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1428,99,0
CP000253.1 250923 . T C 1445.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6287;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1474,102,0
CP000253.1 250938 . T C 1338.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,53:53:96:1367,96,0
CP000253.1 250956 . C T 1358.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,54:54:96:1387,96,0
CP000253.1 250970 . A G 1362.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1391,99,0
CP000253.1 251001 . C T 957.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:72:986,72,0
CP000253.1 251007 . C T 954.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:69:983,69,0
CP000253.1 251022 . C A 965.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:69:994,69,0
CP000253.1 251034 . G A 1089.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1118,78,0
CP000253.1 251043 . G A 1049.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:75:1078,75,0
CP000253.1 251050 . G A 907.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:66:936,66,0
CP000253.1 251064 . T A 831.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:60:860,60,0
CP000253.1 251070 . A T 854.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:63:883,63,0
CP000253.1 251082 . T A 1030.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,40:40:75:1059,75,0
CP000253.1 251085 . A T 1030.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,40:40:75:1059,75,0
CP000253.1 251088 . C T 1073.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1102,78,0
CP000253.1 251104 . G C 1124.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1153,81,0
CP000253.1 251115 . A G 1129.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1158,81,0
CP000253.1 251127 . A T 1130.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1159,81,0
CP000253.1 251139 . T C 1180.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1209,84,0
CP000253.1 251148 . T A 1179.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1208,84,0
CP000253.1 251157 . A G 1118.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1147,81,0
CP000253.1 251160 . G A 1129.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1158,81,0
CP000253.1 251169 . T G 1223.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1252,87,0
CP000253.1 251178 . T C 1200.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,48:49:87:1229,87,0
CP000253.1 251220 . A G 1059.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.792;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1078;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.85;ReadPosRankSum=1.311;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,40:41:78:1088,78,0
CP000253.1 251223 . C T 979.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1078;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:40:72:1008,72,0
CP000253.1 251226 . A T 1015.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:40:75:1044,75,0
CP000253.1 251241 . C T 903.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:66:932,66,0
CP000253.1 251244 . A T 908.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:66:937,66,0
CP000253.1 251318 . G A 506.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:535,39,0
CP000253.1 251319 . T C 490.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.87;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:18:39:519,39,0
CP000253.1 251320 . A T 502.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7021;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.93;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:531,39,0
CP000253.1 251324 . A C 502.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7021;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.93;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:531,39,0
CP000253.1 251328 . C A 493.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.790;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7021;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.43;ReadPosRankSum=1.351;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,17:18:39:522,39,0
CP000253.1 251332 . A T 475.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:36:504,36,0
CP000253.1 251339 . C T 490.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:519,39,0
CP000253.1 251342 . A G 507.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.21;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:536,39,0
CP000253.1 251904 . T C 4351.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2666;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,177:179:99:4380,310,0
CP000253.1 252147 . G A 4605.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,186:187:99:4634,328,0
CP000253.1 252177 . T C 4344.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.745;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8588;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.41;ReadPosRankSum=-0.380;SOR=0.425 GT:AD:DP:GQ:PL 1/1:1,177:178:99:4373,310,0
CP000253.1 252414 . T G 3481.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9954;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.20;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3510,259,0
CP000253.1 252708 . C T 5850.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8261;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=1;QD=24.58;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,238:239:99:5879,415,0
CP000253.1 252795 . T A 4786.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=1.198 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4815,340,0
CP000253.1 253008 . C T 3008.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3037,214,0
CP000253.1 253122 . G A 3490.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3519,241,0
CP000253.1 253919 . T C 1288.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,49:50:93:1317,93,0
CP000253.1 254851 . C A 6200.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5695;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6229,439,0
CP000253.1 255073 . A G 3967.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,163:166:99:3996,286,0
CP000253.1 255424 . T C 1322.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:96:1351,96,0
CP000253.1 255528 . G T 1181.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1210,84,0
CP000253.1 255589 . G A 961.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2851;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:69:990,69,0
CP000253.1 255736 . C T 3861.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3890,274,0
CP000253.1 255766 . A C 4414.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5270;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,185:187:99:4443,307,0
CP000253.1 255802 . G A 5098.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,219:221:99:5127,352,0
CP000253.1 255862 . A T 4927.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,215:215:99:4956,337,0
CP000253.1 255989 . C T 2716.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.061;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1114;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.04;ReadPosRankSum=-1.242;SOR=0.514 GT:AD:DP:GQ:PL 1/1:1,112:113:99:2745,190,0
CP000253.1 256400 . A G 6106.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1515;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=24.53;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6135,427,0
CP000253.1 256513 . T C 5706.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,232:234:99:5735,403,0
CP000253.1 257050 . C T 1999.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4382;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2028,144,0
CP000253.1 257098 . T A 2091.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:85:99:2120,150,0
CP000253.1 257182 . T C 1949.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1978,141,0
CP000253.1 257184 . C T 1904.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.953;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.40;ReadPosRankSum=0.717;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,74:76:99:1933,135,0
CP000253.1 257347 . C T 3046.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0230;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,126:128:99:3075,217,0
CP000253.1 258130 . T C 5584.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.804;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.39;ReadPosRankSum=0.962;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,228:230:99:5613,394,0
CP000253.1 258658 . A G 875.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.852;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6689;MLEAC=2;MLEAF=1.00;MQ=59.62;MQ0=0;MQRankSum=-0.121;QD=24.33;ReadPosRankSum=-1.338;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,35:36:63:904,63,0
CP000253.1 258715 . G T 834.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:60:863,60,0
CP000253.1 258738 . T A 895.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:66:924,66,0
CP000253.1 258780 . A C 1173.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1202,84,0
CP000253.1 258853 . G A 929.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:66:958,66,0
CP000253.1 258854 . A G 921.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:66:950,66,0
CP000253.1 258855 . T C 917.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:66:946,66,0
CP000253.1 258901 . G C 1127.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1156,81,0
CP000253.1 258998 . C T 1006.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1035,72,0
CP000253.1 259007 . G T 1082.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1111,78,0
CP000253.1 259117 . T G 5212.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.938;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.01;ReadPosRankSum=-1.000;SOR=0.541 GT:AD:DP:GQ:PL 1/1:1,192:193:99:5241,373,0
CP000253.1 259421 . G A 6338.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5682;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,244:244:99:6367,451,0
CP000253.1 259714 . G A 271.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:300,21,0
CP000253.1 260183 . T A 3406.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7447;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3435,244,0
CP000253.1 260555 . C T 2923.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2952,211,0
CP000253.1 260589 . T C 2552.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5783;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2581,184,0
CP000253.1 260590 . A G 2601.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2630,187,0
CP000253.1 260828 . C T 1704.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1733,123,0
CP000253.1 260847 . C T 1544.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6672;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1573,111,0
CP000253.1 261120 . A T 3039.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.797;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.03;ReadPosRankSum=-1.615;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,131:132:99:3068,214,0
CP000253.1 261123 . T G 2991.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.157;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7299;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.01;ReadPosRankSum=1.939;SOR=0.397 GT:AD:DP:GQ:PL 1/1:3,127:131:99:3020,211,0
CP000253.1 261141 . A G 2971.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1588;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,132:135:99:3000,211,0
CP000253.1 261323 . G A 1366.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1395,99,0
CP000253.1 261347 . C A 1160.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.1982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:87:1189,87,0
CP000253.1 261470 . A G 3531.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.600;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6176;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.70;ReadPosRankSum=1.790;SOR=0.760 GT:AD:DP:GQ:PL 1/1:2,141:144:99:3560,250,0
CP000253.1 261541 . C A 4086.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.977;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.77;ReadPosRankSum=0.872;SOR=0.713 GT:AD:DP:GQ:PL 1/1:1,164:165:99:4115,289,0
CP000253.1 261749 . C T 4485.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.900;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9573;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.70;ReadPosRankSum=-1.155;SOR=0.437 GT:AD:DP:GQ:PL 1/1:1,167:168:99:4514,322,0
CP000253.1 261752 . T A 4319.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6401;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,164:165:99:4348,310,0
CP000253.1 261895 . C T 4091.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,162:163:99:4120,295,0
CP000253.1 262012 . A T 3422.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.783;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2335;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.17;ReadPosRankSum=-1.045;SOR=0.363 GT:AD:DP:GQ:PL 1/1:1,135:139:99:3451,247,0
CP000253.1 262164 . T C 1369.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4161;MLEAC=2;MLEAF=1.00;MQ=59.53;MQ0=0;QD=25.84;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:54:99:1398,99,0
CP000253.1 262193 . G A 1187.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8764;MLEAC=2;MLEAF=1.00;MQ=59.48;MQ0=0;QD=24.24;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1216,87,0
CP000253.1 262217 . T C 1034.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8936;MLEAC=2;MLEAF=1.00;MQ=59.41;MQ0=0;QD=24.06;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1063,75,0
CP000253.1 262299 . A G 833.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:60:862,60,0
CP000253.1 263174 . C T 4500.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8234;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,191:191:99:4529,310,0
CP000253.1 263611 . T G 175.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.32;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:204,15,0
CP000253.1 264763 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 264897 . T G 1181.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.64;ReadPosRankSum=1.460;SOR=0.549 GT:AD:DP:GQ:PL 1/1:1,49:50:84:1210,84,0
CP000253.1 264983 . A C 3102.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.905;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.64;ReadPosRankSum=1.736;SOR=1.092 GT:AD:DP:GQ:PL 1/1:1,120:122:99:3131,223,0
CP000253.1 265041 . A T 4311.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3819;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=1.199 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4340,304,0
CP000253.1 265062 . C T 4418.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=1.212 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4447,316,0
CP000253.1 265068 . T G 4147.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.315;DP=171;Dels=0.00;ExcessHet=3.0103;FS=2.856;HaplotypeScore=12.9485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.26;ReadPosRankSum=-0.726;SOR=0.217 GT:AD:DP:GQ:PL 1/1:2,169:171:99:4176,252,0
CP000253.1 265071 . A G 4244.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.984;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0755;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.97;ReadPosRankSum=-1.611;SOR=0.436 GT:AD:DP:GQ:PL 1/1:1,169:171:99:4273,301,0
CP000253.1 265092 . A T 4213.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4242,298,0
CP000253.1 265095 . T A 4373.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4402,310,0
CP000253.1 265098 . C T 4347.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.133 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4376,307,0
CP000253.1 265101 . A G 4220.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.871;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0881;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.40;ReadPosRankSum=1.663;SOR=0.899 GT:AD:DP:GQ:PL 1/1:1,172:173:99:4249,301,0
CP000253.1 265104 . T A 4308.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5659;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4337,307,0
CP000253.1 265147 . A G 4546.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.2691;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.947 GT:AD:DP:GQ:PL 1/1:0,192:194:99:4575,322,0
CP000253.1 265356 . T A 3329.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3101;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3358,244,0
CP000253.1 265478 . A G 5023.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,200:201:99:5052,358,0
CP000253.1 265511 . T A 4892.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.893;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=0.366;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,193:195:99:4921,346,0
CP000253.1 265515 . A G 4850.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,192:195:99:4879,343,0
CP000253.1 265611 . T C 5425.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.954;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2725;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.89;ReadPosRankSum=0.223;SOR=0.234 GT:AD:DP:GQ:PL 1/1:1,217:218:99:5454,385,0
CP000253.1 265662 . C T 5306.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=220;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7843;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=0.995;SOR=0.234 GT:AD:DP:GQ:PL 1/1:1,215:218:99:5335,382,0
CP000253.1 265705 . G A 4808.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.768;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.1407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.53;ReadPosRankSum=1.202;SOR=0.338 GT:AD:DP:GQ:PL 1/1:1,195:197:99:4837,343,0
CP000253.1 265724 . A T 4240.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.691;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.2446;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.23;ReadPosRankSum=-0.901;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,174:175:99:4269,304,0
CP000253.1 265725 . G A 4401.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.2446;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4430,322,0
CP000253.1 265764 . A C 4136.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.347;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.9319;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.48;ReadPosRankSum=1.060;SOR=0.333 GT:AD:DP:GQ:PL 1/1:4,165:170:99:4165,307,0
CP000253.1 265833 . C A 5030.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.7770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,200:200:99:5059,358,0
CP000253.1 266082 . T C 3711.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.731;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=0.787;SOR=0.781 GT:AD:DP:GQ:PL 1/1:1,151:155:99:3740,271,0
CP000253.1 266351 . A G 635.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8271;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.90;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,22:22:48:664,48,0
CP000253.1 266553 . A C 2472.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.511;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8573;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.48;ReadPosRankSum=2.024;SOR=0.432 GT:AD:DP:GQ:PL 1/1:2,99:101:99:2501,178,0
CP000253.1 266558 . T C 2496.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2525,181,0
CP000253.1 266599 . C T 3021.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3238;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3050,214,0
CP000253.1 266659 . C T 3715.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7283;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,151:152:99:3744,262,0
CP000253.1 266665 . A G 3658.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3687;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,150:152:99:3687,259,0
CP000253.1 266698 . A C 4033.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.666;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8721;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.92;ReadPosRankSum=-0.256;SOR=0.228 GT:AD:DP:GQ:PL 1/1:1,175:178:99:4062,286,0
CP000253.1 266818 . T G 3827.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.875;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4175;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.23;ReadPosRankSum=-0.757;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,157:158:99:3856,268,0
CP000253.1 266885 . A T 3210.76 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1089;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3239,226,0
CP000253.1 266911 . T G 2777.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.858;DP=122;Dels=0.00;ExcessHet=3.0103;FS=3.409;HaplotypeScore=6.1920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.77;ReadPosRankSum=-0.240;SOR=0.343 GT:AD:DP:GQ:PL 1/1:3,119:122:99:2806,199,0
CP000253.1 266932 . T C 2635.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3409;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,108:109:99:2664,187,0
CP000253.1 266966 . A G 1940.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.874;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2858;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.88;ReadPosRankSum=0.671;SOR=0.484 GT:AD:DP:GQ:PL 1/1:1,74:75:99:1969,141,0
CP000253.1 267028 . T G 1682.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1711,120,0
CP000253.1 267323 . T A 630.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:659,45,0
CP000253.1 267435 . T G 811.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:57:840,57,0
CP000253.1 267479 . G A 987.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1016,69,0
CP000253.1 267493 . T C 972.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1001,69,0
CP000253.1 267510 . C T 1063.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:46:75:1092,75,0
CP000253.1 267543 . G C 1017.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:72:1046,72,0
CP000253.1 267548 . A G 1017.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:72:1046,72,0
CP000253.1 267862 . A T 2161.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.43;ReadPosRankSum=-0.917;SOR=0.364 GT:AD:DP:GQ:PL 1/1:1,84:86:99:2190,157,0
CP000253.1 268490 . G T 3769.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4838;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=26.00;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3798,271,0
CP000253.1 268709 . A T 2693.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2722,193,0
CP000253.1 268722 . G A 2520.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2725;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2549,181,0
CP000253.1 268724 . G A 2477.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.979 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2506,178,0
CP000253.1 268737 . G A 2434.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,98:101:99:2463,175,0
CP000253.1 268772 . T C 2199.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0754;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2228,163,0
CP000253.1 268779 . T C 2099.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0338;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2128,150,0
CP000253.1 268848 . A C 1355.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4176;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1384,99,0
CP000253.1 269022 . C T 862.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.286;DP=38;Dels=0.00;ExcessHet=3.0103;FS=3.378;HaplotypeScore=10.4605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.32;ReadPosRankSum=1.689;SOR=0.574 GT:AD:DP:GQ:PL 1/1:1,36:38:66:891,66,0
CP000253.1 269100 . G A 1337.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1366,96,0
CP000253.1 269109 . A G 1482.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1511,108,0
CP000253.1 269397 . G A 1628.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1657,114,0
CP000253.1 269491 . T A 360.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:389,27,0
CP000253.1 269562 . G A 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 269638 . A G 1818.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1847,126,0
CP000253.1 269941 . C T 1860.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7064;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1889,132,0
CP000253.1 269970 . C T 1502.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.32;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1531,108,0
CP000253.1 270070 . A G 1094.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1123,78,0
CP000253.1 270324 . C A 2704.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.720;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0028;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.12;ReadPosRankSum=-1.378;SOR=0.782 GT:AD:DP:GQ:PL 1/1:2,115:117:99:2733,151,0
CP000253.1 270501 . A G 1950.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7163;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=21.92;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:89:99:1979,138,0
CP000253.1 270700 . A G 2820.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0009;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2849,199,0
CP000253.1 270776 . T C 3535.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3039;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,142:148:99:3564,253,0
CP000253.1 270896 . T C 4928.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,211:212:99:4957,343,0
CP000253.1 271278 . C T 2339.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4325;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2368,166,0
CP000253.1 271281 . G A 2241.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.686;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.60;ReadPosRankSum=-0.255;SOR=0.322 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2270,139,0
CP000253.1 271401 . T C 1271.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5862;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1300,93,0
CP000253.1 271431 . T G 824.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:60:853,60,0
CP000253.1 271556 . C T 351.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:380,27,0
CP000253.1 271687 . T C 532.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.31;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:561,39,0
CP000253.1 271984 . A G 541.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:570,39,0
CP000253.1 271985 . T C 532.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.970;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.16;ReadPosRankSum=-0.838;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,22:23:39:561,39,0
CP000253.1 271987 . A G 606.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:25:45:635,45,0
CP000253.1 271996 . A G 609.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:638,45,0
CP000253.1 272005 . T C 587.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.549;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.61;ReadPosRankSum=-0.936;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,25:26:45:616,45,0
CP000253.1 272266 . T C 513.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:23:39:542,39,0
CP000253.1 272269 . T A 524.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:553,39,0
CP000253.1 272273 . A T 608.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2368;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:637,45,0
CP000253.1 272537 . T C 855.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:884,60,0
CP000253.1 272623 . A C 444.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.18;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:473,33,0
CP000253.1 272809 . T A 1774.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.18;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1803,123,0
CP000253.1 272833 . G A 1599.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1628,111,0
CP000253.1 272842 . T C 1674.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1703,117,0
CP000253.1 272971 . T A 693.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.752;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.38;ReadPosRankSum=0.056;SOR=0.643 GT:AD:DP:GQ:PL 1/1:1,30:31:51:722,51,0
CP000253.1 272983 . A G 673.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:51:702,51,0
CP000253.1 272991 . G A 559.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:588,42,0
CP000253.1 273010 . A G 475.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:39:504,39,0
CP000253.1 273013 . A T 544.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.24;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:42:573,42,0
CP000253.1 273057 . G A 341.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.48;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:13:27:370,27,0
CP000253.1 273227 . G A 131.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:159,12,0
CP000253.1 273283 . T C 139.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.81;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:167,12,0
CP000253.1 273981 . T C 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 274043 . A T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 274222 . C A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 275180 . G A 4323.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.922;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2891;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.85;ReadPosRankSum=1.434;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,173:176:99:4352,310,0
CP000253.1 275431 . G A 4182.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.096;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9049;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.90;ReadPosRankSum=0.133;SOR=0.963 GT:AD:DP:GQ:PL 1/1:2,173:175:99:4211,262,0
CP000253.1 275574 . T C 2527.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.918;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1364;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.06;ReadPosRankSum=0.911;SOR=0.555 GT:AD:DP:GQ:PL 1/1:1,96:97:99:2556,146,0
CP000253.1 275772 . T G 112.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:140,12,0
CP000253.1 275793 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 275862 . G T 181.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:210,15,0
CP000253.1 276496 . C T 1358.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1387,99,0
CP000253.1 277033 . A G 1780.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1809,123,0
CP000253.1 277147 . C T 1452.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1481,102,0
CP000253.1 277330 . T C 1923.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,83:84:99:1952,135,0
CP000253.1 277441 . G A 2274.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:101:99:2303,157,0
CP000253.1 277542 . A G 1710.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1739,123,0
CP000253.1 277594 . T C 1651.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1680,117,0
CP000253.1 277768 . T C 1614.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2408;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1643,117,0
CP000253.1 278083 . G A 3516.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3545,241,0
CP000253.1 278134 . C T 2256.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2285,160,0
CP000253.1 278311 . C T 910.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.690;DP=39;Dels=0.00;ExcessHet=3.0103;FS=3.358;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.35;ReadPosRankSum=0.975;SOR=0.556 GT:AD:DP:GQ:PL 1/1:1,38:39:69:939,69,0
CP000253.1 278359 . G A 1093.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.45;ReadPosRankSum=-1.007;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,50:51:56:1122,56,0
CP000253.1 278380 . T C 1020.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.045;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.02;ReadPosRankSum=-1.146;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,50:51:40:1049,40,0
CP000253.1 278401 . T C 1096.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.957;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.09;ReadPosRankSum=-1.554;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,51:52:48:1125,48,0
CP000253.1 278404 . T C 1116.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.670;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.48;ReadPosRankSum=-1.557;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,51:52:44:1145,44,0
CP000253.1 278407 . G A 1129.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.15;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:52:81:1158,81,0
CP000253.1 278416 . A T 1094.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.266;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.66;ReadPosRankSum=-1.100;SOR=0.813 GT:AD:DP:GQ:PL 1/1:2,51:53:44:1123,44,0
CP000253.1 278419 . T C 1111.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.690;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.98;ReadPosRankSum=-1.475;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,52:53:44:1140,44,0
CP000253.1 278437 . T C 1125.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.786;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5165;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.65;ReadPosRankSum=-0.667;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,51:52:48:1154,48,0
CP000253.1 278455 . T C 1125.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.590;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2413;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.52;ReadPosRankSum=-0.555;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,49:50:50:1154,50,0
CP000253.1 278470 . A T 1069.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.564;DP=48;Dels=0.00;ExcessHet=3.0103;FS=3.104;HaplotypeScore=3.4594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.29;ReadPosRankSum=-0.361;SOR=0.424 GT:AD:DP:GQ:PL 1/1:1,47:48:45:1098,45,0
CP000253.1 278489 . T A 1082.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7448;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1111,78,0
CP000253.1 278503 . T A 1036.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1750;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1065,75,0
CP000253.1 278512 . C A 799.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.22;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:57:828,57,0
CP000253.1 278525 . G T 547.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.597;DP=26;Dels=0.00;ExcessHet=3.0103;FS=3.388;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.07;ReadPosRankSum=1.737;SOR=0.861 GT:AD:DP:GQ:PL 1/1:1,25:26:42:576,42,0
CP000253.1 278527 . C A 568.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:597,42,0
CP000253.1 278530 . C T 647.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:48:676,48,0
CP000253.1 278545 . G A 659.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:48:688,48,0
CP000253.1 278581 . T G 953.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.800;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.71;ReadPosRankSum=0.993;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,41:42:69:982,69,0
CP000253.1 278584 . C T 955.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:69:984,69,0
CP000253.1 278593 . T C 949.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:69:978,69,0
CP000253.1 278629 . G A 824.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:60:853,60,0
CP000253.1 278641 . A G 788.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:57:817,57,0
CP000253.1 278767 . C G 459.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:33:488,33,0
CP000253.1 278857 . A T 612.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:641,45,0
CP000253.1 278956 . G A 1324.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:93:1353,93,0
CP000253.1 279052 . C T 1231.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:87:1260,87,0
CP000253.1 279157 . A G 1598.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1627,114,0
CP000253.1 279252 . T C 1118.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4884;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1147,81,0
CP000253.1 279253 . G A 1132.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4884;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1161,81,0
CP000253.1 279286 . C T 746.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:54:775,54,0
CP000253.1 279480 . C T 849.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4293;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.41;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:33:63:878,63,0
CP000253.1 279483 . C T 855.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.74;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,32:33:63:884,63,0
CP000253.1 279488 . C A 872.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2762;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:33:63:901,63,0
CP000253.1 279489 . G A 863.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2762;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:33:63:892,63,0
CP000253.1 279492 . T C 873.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:33:63:902,63,0
CP000253.1 279495 . T C 869.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:33:63:898,63,0
CP000253.1 279498 . T C 872.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:33:63:901,63,0
CP000253.1 279859 . C T 359.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:388,27,0
CP000253.1 280309 . T A 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 280354 . C T 1159.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1188,84,0
CP000253.1 280366 . G T 1403.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3843;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=1.047 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1432,99,0
CP000253.1 280381 . A G 1449.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.087;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8797;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.38;ReadPosRankSum=2.256;SOR=1.071 GT:AD:DP:GQ:PL 1/1:2,60:62:64:1478,64,0
CP000253.1 280408 . C A 1859.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.749;DP=83;Dels=0.00;ExcessHet=3.0103;FS=3.280;HaplotypeScore=2.6616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.41;ReadPosRankSum=1.734;SOR=0.458 GT:AD:DP:GQ:PL 1/1:1,82:83:99:1888,132,0
CP000253.1 280426 . G T 2062.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.517;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.18;ReadPosRankSum=0.305;SOR=0.855 GT:AD:DP:GQ:PL 1/1:2,91:94:99:2091,110,0
CP000253.1 280453 . T G 2341.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.111;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.09;ReadPosRankSum=-0.453;SOR=0.813 GT:AD:DP:GQ:PL 1/1:2,104:106:99:2370,124,0
CP000253.1 280489 . G A 3336.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3365,232,0
CP000253.1 280690 . A G 2618.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2647,184,0
CP000253.1 280720 . T C 2251.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2280,157,0
CP000253.1 280738 . T G 2088.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2117,147,0
CP000253.1 280753 . C T 1576.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1605,111,0
CP000253.1 280870 . T A 304.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:333,24,0
CP000253.1 280972 . T C 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 281668 . A G 4144.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,179:180:99:4173,295,0
CP000253.1 281816 . C T 2732.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3483;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:114:99:2761,193,0
CP000253.1 281821 . G A 2752.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2781,193,0
CP000253.1 282016 . G C 2377.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2406,169,0
CP000253.1 282589 . G A 4416.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4445,307,0
CP000253.1 282649 . T C 4758.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.7133;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.21;ReadPosRankSum=-1.353;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,204:206:99:4787,337,0
CP000253.1 282661 . A G 4953.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,212:213:99:4982,346,0
CP000253.1 282763 . G T 3825.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9708;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,165:165:99:3854,268,0
CP000253.1 282778 . A G 3847.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,161:163:99:3876,268,0
CP000253.1 282799 . G A 3763.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.947;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=0.610;SOR=0.556 GT:AD:DP:GQ:PL 1/1:1,158:160:99:3792,262,0
CP000253.1 283138 . C T 2252.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2281,160,0
CP000253.1 283157 . C A 2786.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,117:118:99:2815,199,0
CP000253.1 283459 . C T 3329.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1698;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3358,235,0
CP000253.1 283462 . T A 3526.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6954;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3555,247,0
CP000253.1 283474 . A G 3511.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3668;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3540,247,0
CP000253.1 283682 . A G 2789.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.878;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.36;ReadPosRankSum=1.497;SOR=0.370 GT:AD:DP:GQ:PL 1/1:1,109:113:99:2818,202,0
CP000253.1 283687 . G A 2830.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4218;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=-0.626;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,118:119:99:2859,202,0
CP000253.1 283879 . G A 3251.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3280,232,0
CP000253.1 284155 . T C 4721.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7432;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,193:194:99:4750,331,0
CP000253.1 284161 . T C 4602.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5324;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,190:192:99:4631,328,0
CP000253.1 284176 . C T 4771.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.613;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6950;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.35;ReadPosRankSum=-1.072;SOR=0.778 GT:AD:DP:GQ:PL 1/1:2,194:197:99:4800,340,0
CP000253.1 284179 . A C 4781.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.533;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3053;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.03;ReadPosRankSum=-0.722;SOR=0.788 GT:AD:DP:GQ:PL 1/1:2,197:199:99:4810,337,0
CP000253.1 284215 . C T 4373.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.6661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,178:182:99:4402,310,0
CP000253.1 284237 . C T 4519.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.5257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,178:182:99:4548,322,0
CP000253.1 284248 . G A 4393.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1526;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4422,316,0
CP000253.1 284542 . T C 3994.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,150:152:99:4023,292,0
CP000253.1 284548 . C T 3983.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0733;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4012,286,0
CP000253.1 284560 . C T 3817.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3846,274,0
CP000253.1 284569 . C T 4225.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4254,301,0
CP000253.1 284629 . T C 3927.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3956,283,0
CP000253.1 284665 . C T 4046.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.16;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,149:149:99:4075,295,0
CP000253.1 284711 . C T 4076.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4105,289,0
CP000253.1 284797 . G A 4458.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4487,316,0
CP000253.1 284854 . T A 4378.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5725;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4407,310,0
CP000253.1 284863 . A G 4321.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.935 GT:AD:DP:GQ:PL 1/1:0,173:175:99:4350,307,0
CP000253.1 284896 . A C 4284.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.015;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.3859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.48;ReadPosRankSum=2.340;SOR=0.515 GT:AD:DP:GQ:PL 1/1:3,172:175:99:4313,307,0
CP000253.1 284938 . A G 4076.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,163:164:99:4105,289,0
CP000253.1 284941 . G A 4007.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4036,283,0
CP000253.1 284965 . T A 4147.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1383;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4176,292,0
CP000253.1 284998 . C T 3713.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.938;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1968;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.92;ReadPosRankSum=0.058;SOR=0.626 GT:AD:DP:GQ:PL 1/1:1,148:149:99:3742,262,0
CP000253.1 285040 . C T 2526.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2555,181,0
CP000253.1 285168 . A G 2034.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0019;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2063,144,0
CP000253.1 285187 . A C 1958.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:83:99:1987,138,0
CP000253.1 285301 . T C 1651.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1680,117,0
CP000253.1 285463 . G A 1562.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1591,111,0
CP000253.1 285481 . C T 1117.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1146,81,0
CP000253.1 285505 . T C 1090.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1119,78,0
CP000253.1 285528 . T A 900.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7853;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.30;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:66:929,66,0
CP000253.1 285547 . T C 958.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.959;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.97;ReadPosRankSum=1.128;SOR=0.342 GT:AD:DP:GQ:PL 1/1:1,39:40:69:987,69,0
CP000253.1 285763 . T C 490.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:519,36,0
CP000253.1 285769 . A G 524.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:24:39:553,39,0
CP000253.1 285781 . A G 522.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:23:39:551,39,0
CP000253.1 285784 . C T 564.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:42:593,42,0
CP000253.1 285818 . C T 623.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:45:652,45,0
CP000253.1 285876 . T C 972.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.62;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:69:1001,69,0
CP000253.1 285990 . G A 1462.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1491,102,0
CP000253.1 285994 . T A 1488.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1517,105,0
CP000253.1 286009 . A G 1906.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1069;MLEAC=2;MLEAF=1.00;MQ=59.66;MQ0=0;QD=23.83;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1935,135,0
CP000253.1 286059 . G A 2192.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2269;MLEAC=2;MLEAF=1.00;MQ=59.69;MQ0=0;QD=24.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2221,156,0
CP000253.1 286069 . A T 2058.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.67;MQ0=0;QD=25.11;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2087,147,0
CP000253.1 286077 . G A 2109.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.67;MQ0=0;QD=25.12;SOR=1.013 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2138,150,0
CP000253.1 286083 . G A 2063.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4109;MLEAC=2;MLEAF=1.00;MQ=59.67;MQ0=0;QD=24.86;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2092,147,0
CP000253.1 286104 . T C 2059.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2229;MLEAC=2;MLEAF=1.00;MQ=59.67;MQ0=0;QD=24.52;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2088,150,0
CP000253.1 286190 . A G 2003.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5339;MLEAC=2;MLEAF=1.00;MQ=59.69;MQ0=0;QD=23.03;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:88:99:2032,141,0
CP000253.1 286272 . T G 2358.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.947 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2387,169,0
CP000253.1 286296 . T G 2474.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4187;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2503,178,0
CP000253.1 286297 . G A 2490.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4187;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=1.733;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,101:102:99:2519,178,0
CP000253.1 286325 . C T 2554.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2583,184,0
CP000253.1 286434 . C T 3599.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3588;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,141:142:99:3628,256,0
CP000253.1 286548 . G A 4115.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5479;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4144,286,0
CP000253.1 286690 . C T 3224.61 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2457;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3253,226,0
CP000253.1 286691 . T G 3278.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2457;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3307,232,0
CP000253.1 286706 . G A 3201.82 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=1.027 GT:AD:DP:GQ:PL 1/1:0,129:131:99:3230,226,0
CP000253.1 286766 . C A 2182.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.192 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2211,157,0
CP000253.1 286784 . C A 774.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:57:803,57,0
CP000253.1 286958 . G A 1819.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1848,126,0
CP000253.1 286996 . C T 1778.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1807,123,0
CP000253.1 287057 . A C 1515.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.997;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.29;ReadPosRankSum=-1.454;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,67:68:99:1544,105,0
CP000253.1 287121 . T C 495.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:524,36,0
CP000253.1 287314 . A T 2224.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.700;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6451;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=1.743;SOR=0.578 GT:AD:DP:GQ:PL 1/1:2,92:95:99:2253,157,0
CP000253.1 287795 . T C 2159.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2188,153,0
CP000253.1 287912 . C T 570.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:25:42:599,42,0
CP000253.1 287917 . T A 573.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:602,42,0
CP000253.1 287926 . T C 582.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:611,42,0
CP000253.1 287932 . A T 662.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:691,48,0
CP000253.1 288095 . T C 1420.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1449,102,0
CP000253.1 288103 . A G 1909.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.838;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.52;ReadPosRankSum=-1.593;SOR=1.148 GT:AD:DP:GQ:PL 1/1:1,71:73:99:1938,138,0
CP000253.1 288130 . G A 2130.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=1.339 GT:AD:DP:GQ:PL 1/1:0,81:82:99:2159,154,0
CP000253.1 288133 . C T 2279.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7046;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=1.356 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2308,166,0
CP000253.1 288173 . C A 2489.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2137;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2518,181,0
CP000253.1 288178 . G A 2450.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=1.420 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2479,175,0
CP000253.1 288799 . A G 5105.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0146;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,200:200:99:5134,364,0
CP000253.1 288802 . G A 5043.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,199:200:99:5072,358,0
CP000253.1 288841 . A G 4770.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.50;SOR=1.080 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4799,343,0
CP000253.1 288868 . C T 4104.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1111;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.92;SOR=1.017 GT:AD:DP:GQ:PL 1/1:0,147:148:99:4133,295,0
CP000253.1 288878 . A G 3935.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.33;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3964,283,0
CP000253.1 288895 . G A 3174.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0913;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.37;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3203,229,0
CP000253.1 288900 . C T 2927.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9222;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.11;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,108:110:99:2956,211,0
CP000253.1 288907 . G A 3009.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,112:113:99:3038,217,0
CP000253.1 288937 . T C 2669.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:104:99:2698,193,0
CP000253.1 288938 . G A 2741.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2770,196,0
CP000253.1 288942 . T A 2725.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2754,196,0
CP000253.1 288943 . C T 2744.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2773,196,0
CP000253.1 288949 . A G 2716.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2745,199,0
CP000253.1 288952 . C A 2826.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2855,202,0
CP000253.1 288982 . G A 2601.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2630,184,0
CP000253.1 288985 . G A 2688.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.956 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2717,190,0
CP000253.1 288991 . T A 2681.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2710,190,0
CP000253.1 288997 . C T 2724.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1428;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,110:113:99:2753,196,0
CP000253.1 289006 . T A 2688.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.642;DP=110;Dels=0.00;ExcessHet=3.0103;FS=3.263;HaplotypeScore=9.8070;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.44;ReadPosRankSum=0.978;SOR=0.491 GT:AD:DP:GQ:PL 1/1:1,109:110:99:2717,168,0
CP000253.1 289024 . A G 2695.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8524;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2724,196,0
CP000253.1 289027 . C T 2677.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2706,193,0
CP000253.1 289039 . T G 2804.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4360;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2833,199,0
CP000253.1 289069 . C T 2749.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1077;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,112:114:99:2778,196,0
CP000253.1 289084 . G C 2675.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2704,190,0
CP000253.1 289086 . A G 2762.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2791,196,0
CP000253.1 289095 . G A 2902.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0250;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2931,205,0
CP000253.1 289117 . G A 2638.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0799;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2667,187,0
CP000253.1 289162 . T C 2267.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1418;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=1.080 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2296,163,0
CP000253.1 289177 . T G 2088.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=1.207 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2117,150,0
CP000253.1 289189 . T A 2020.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4576;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2049,144,0
CP000253.1 289201 . G A 1855.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1884,135,0
CP000253.1 289215 . T A 1709.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1738,123,0
CP000253.1 289226 . C T 1132.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1161,81,0
CP000253.1 289237 . G A 252.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:21:281,21,0
CP000253.1 289240 . A T 197.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:18:226,18,0
CP000253.1 289244 . C G 82.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:110,9,0
CP000253.1 289252 . T C 90.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0
CP000253.1 289255 . T G 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 289256 . C T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 289261 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 289265 . G C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 289266 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 289267 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 289274 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 289278 . T C 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 289279 . C A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 289282 . A C 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 289291 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 289295 . G T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 289315 . G A 168.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:197,15,0
CP000253.1 289321 . A T 131.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.465;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.72;ReadPosRankSum=0.180;SOR=1.108 GT:AD:DP:GQ:PL 1/1:1,6:7:12:159,12,0
CP000253.1 289329 . G A 170.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:199,15,0
CP000253.1 289330 . C A 165.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6611;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:194,15,0
CP000253.1 289345 . A G 139.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:167,12,0
CP000253.1 289382 . G A 180.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:209,15,0
CP000253.1 289483 . G A 557.79 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.398;DP=29;Dels=0.00;ExcessHet=3.0103;FS=2.235;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=58.05;MQ0=0;MQRankSum=1.422;QD=19.23;ReadPosRankSum=2.836;SOR=0.574 GT:AD:DP:GQ:PL 0/1:3,26:29:23:586,0,23
CP000253.1 289544 . T G 392.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.631;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7798;MLEAC=1;MLEAF=0.500;MQ=51.32;MQ0=4;MQRankSum=0.290;QD=15.11;ReadPosRankSum=1.454;SOR=0.317 GT:AD:DP:GQ:PL 0/1:6,20:27:34:421,0,34
CP000253.1 289547 . A G 405.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.583;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7798;MLEAC=1;MLEAF=0.500;MQ=51.32;MQ0=4;MQRankSum=1.417;QD=15.03;ReadPosRankSum=1.102;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,21:27:34:434,0,34
CP000253.1 289568 . A G 310.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.438;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=51.32;MQ0=4;MQRankSum=0.680;QD=11.51;ReadPosRankSum=0.807;SOR=0.804 GT:AD:DP:GQ:PL 0/1:8,19:27:99:339,0,112
CP000253.1 289599 . A G 538.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.32;MQ0=4;QD=19.95;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,27:27:42:567,42,0
CP000253.1 289667 . A G 295.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6358;MLEAC=2;MLEAF=1.00;MQ=49.19;MQ0=2;QD=18.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:324,24,0
CP000253.1 289724 . C T 325.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4250;MLEAC=2;MLEAF=1.00;MQ=52.59;MQ0=0;QD=23.27;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:354,27,0
CP000253.1 289733 . T C 101.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.012;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2649;MLEAC=1;MLEAF=0.500;MQ=50.38;MQ0=0;MQRankSum=-0.933;QD=9.25;ReadPosRankSum=-2.548;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,5:11:99:130,0,100
CP000253.1 289742 . A T 74.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.611;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=1;MLEAF=0.500;MQ=49.31;MQ0=0;MQRankSum=2.200;QD=7.48;ReadPosRankSum=2.881;SOR=0.850 GT:AD:DP:GQ:PL 0/1:5,5:10:96:103,0,96
CP000253.1 289745 . A G 47.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=50.69;MQ0=0;MQRankSum=-1.699;QD=5.97;ReadPosRankSum=-2.369;SOR=1.034 GT:AD:DP:GQ:PL 0/1:5,3:8:76:76,0,103
CP000253.1 289749 . G A 189.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=2;MLEAF=1.00;MQ=50.69;MQ0=0;QD=23.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:218,18,0
CP000253.1 289754 . A G 62.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.887;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=1;MLEAF=0.500;MQ=50.69;MQ0=0;MQRankSum=-1.699;QD=7.85;ReadPosRankSum=-2.369;SOR=1.034 GT:AD:DP:GQ:PL 0/1:5,3:8:91:91,0,103
CP000253.1 289760 . T A 29.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=1;MLEAF=0.500;MQ=53.43;MQ0=0;MQRankSum=-1.180;QD=4.25;ReadPosRankSum=-1.981;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,2:7:58:58,0,106
CP000253.1 289764 . T C 77.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=1;MLEAF=0.500;MQ=53.43;MQ0=0;MQRankSum=1.180;QD=11.11;ReadPosRankSum=1.981;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:62:106,0,62
CP000253.1 289788 . T A 48.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.41;MQ0=0;QD=16.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:76,6,0
CP000253.1 289855 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 289868 . T G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 289869 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 289871 . T G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 289872 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 289874 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 289881 . G C 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 289906 . T A 315.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.05;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:344,24,0
CP000253.1 289916 . A G 364.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:393,27,0
CP000253.1 289919 . T A 346.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:375,27,0
CP000253.1 289930 . A G 358.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:387,27,0
CP000253.1 289964 . A G 364.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.46;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:393,27,0
CP000253.1 289968 . T G 368.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:397,27,0
CP000253.1 290007 . A G 409.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:438,30,0
CP000253.1 290029 . A G 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 290035 . G T 89.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:117,9,0
CP000253.1 290049 . T G 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 290050 . A T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 290053 . C A 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 290056 . A T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 290059 . G A 89.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:117,9,0
CP000253.1 290062 . T C 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 290074 . G A 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 290103 . A G 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 290119 . T C 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 290184 . G A 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 290185 . C T 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 290192 . A G 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 290196 . A T 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 290255 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 290294 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 290295 . A G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 290321 . A G 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 290339 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 290345 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 290350 . A G 139.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.465;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.86;ReadPosRankSum=0.180;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,6:7:12:167,12,0
CP000253.1 290360 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 290372 . C T 143.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:171,12,0
CP000253.1 290397 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 290411 . C T 226.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.31;MQ0=0;QD=22.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:255,18,0
CP000253.1 290413 . C T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.31;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 290424 . A C 269.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.59;MQ0=0;QD=22.48;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:298,21,0
CP000253.1 290425 . C T 269.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.47;MQ0=0;QD=24.53;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:298,21,0
CP000253.1 290426 . A G 304.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.70;MQ0=0;QD=23.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:333,24,0
CP000253.1 290446 . T C 316.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.56;MQ0=0;QD=24.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:345,24,0
CP000253.1 290447 . T A 310.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.56;MQ0=0;QD=23.91;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:339,24,0
CP000253.1 290459 . T C 314.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.56;MQ0=0;QD=24.21;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:343,24,0
CP000253.1 290468 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 290469 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 290486 . G A 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 290513 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 290519 . G A 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 290543 . C T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 290549 . A G 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 290576 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 290667 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 290687 . T C 141.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:169,12,0
CP000253.1 290792 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 290809 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 290810 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 290816 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 290822 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 290839 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 290848 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 290949 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 291065 . G T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 291517 . T C 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 291527 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 291611 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 292075 . G C 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.17;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 292083 . T C 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.17;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 292085 . G A 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.17;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 292107 . C T 369.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.17;MQ0=0;QD=21.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:398,27,0
CP000253.1 292119 . G A 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.17;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 292131 . G A 256.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.886;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.78;MQ0=0;MQRankSum=-0.432;QD=17.12;ReadPosRankSum=-1.453;SOR=0.836 GT:AD:DP:GQ:PL 0/1:2,13:15:21:285,0,21
CP000253.1 292132 . C A 256.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.278;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.78;MQ0=0;MQRankSum=-0.432;QD=17.12;ReadPosRankSum=-1.453;SOR=0.836 GT:AD:DP:GQ:PL 0/1:2,13:15:21:285,0,21
CP000253.1 292141 . G A 322.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.78;MQ0=0;QD=21.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:351,24,0
CP000253.1 292149 . A T 145.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=20.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:173,12,0
CP000253.1 292153 . G A 42.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.697;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.32;MQ0=0;MQRankSum=1.068;QD=6.11;ReadPosRankSum=-2.189;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:71:71,0,78
CP000253.1 292170 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.23;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 292179 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.23;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 292199 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.23;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 292329 . G A 80.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0
CP000253.1 292330 . C T 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 292331 . T A 85.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0
CP000253.1 292359 . C T 221.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.091;DP=12;Dels=0.00;ExcessHet=3.0103;FS=4.228;HaplotypeScore=0.9998;MLEAC=1;MLEAF=0.500;MQ=54.87;MQ0=0;MQRankSum=2.838;QD=18.48;ReadPosRankSum=2.147;SOR=2.022 GT:AD:DP:GQ:PL 0/1:3,9:12:21:250,0,21
CP000253.1 292367 . G A 229.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.301;DP=12;Dels=0.00;ExcessHet=3.0103;FS=3.090;HaplotypeScore=0.9998;MLEAC=1;MLEAF=0.500;MQ=54.87;MQ0=0;MQRankSum=2.838;QD=19.15;ReadPosRankSum=2.147;SOR=2.022 GT:AD:DP:GQ:PL 0/1:3,9:12:21:258,0,21
CP000253.1 292371 . T A 246.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.87;MQ0=0;QD=27.42;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:12:18:251,18,0
CP000253.1 292374 . C T 268.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.87;MQ0=0;QD=22.40;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:21:297,21,0
CP000253.1 292375 . A G 196.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.137;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.87;MQ0=0;MQRankSum=2.838;QD=16.40;ReadPosRankSum=2.147;SOR=2.022 GT:AD:DP:GQ:PL 0/1:3,9:12:24:225,0,24
CP000253.1 292380 . G A 236.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.875;DP=12;Dels=0.00;ExcessHet=3.0103;FS=3.090;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.87;MQ0=0;MQRankSum=2.838;QD=19.73;ReadPosRankSum=2.147;SOR=2.022 GT:AD:DP:GQ:PL 0/1:3,9:12:21:265,0,21
CP000253.1 292383 . T A 291.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.87;MQ0=0;QD=24.32;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:24:320,24,0
CP000253.1 292386 . A T 233.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.139;DP=12;Dels=0.00;ExcessHet=3.0103;FS=3.090;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.87;MQ0=0;MQRankSum=2.838;QD=19.48;ReadPosRankSum=2.147;SOR=2.022 GT:AD:DP:GQ:PL 0/1:3,9:12:21:262,0,21
CP000253.1 292389 . T A 307.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.87;MQ0=0;QD=25.65;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:24:336,24,0
CP000253.1 292410 . A C 407.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.110;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.13;MQ0=0;MQRankSum=2.511;QD=12.74;ReadPosRankSum=1.836;SOR=0.655 GT:AD:DP:GQ:PL 0/1:11,21:32:99:436,0,176
CP000253.1 292438 . C G 272.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.475;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=56.42;MQ0=0;MQRankSum=-3.100;QD=7.37;ReadPosRankSum=-2.769;SOR=0.657 GT:AD:DP:GQ:PL 0/1:20,17:38:99:301,0,427
CP000253.1 292497 . A G 269.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.558;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.60;MQ0=0;MQRankSum=-3.306;QD=6.74;ReadPosRankSum=-3.280;SOR=0.736 GT:AD:DP:GQ:PL 0/1:23,17:40:99:298,0,461
CP000253.1 292500 . A G 269.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.330;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.60;MQ0=0;MQRankSum=-3.306;QD=6.74;ReadPosRankSum=-3.198;SOR=0.736 GT:AD:DP:GQ:PL 0/1:23,17:40:99:298,0,472
CP000253.1 292507 . G C 272.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.081;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.42;MQ0=0;MQRankSum=-3.170;QD=7.18;ReadPosRankSum=-3.608;SOR=0.730 GT:AD:DP:GQ:PL 0/1:21,17:38:99:301,0,431
CP000253.1 292515 . A G 272.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.314;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.42;MQ0=0;MQRankSum=-3.170;QD=7.18;ReadPosRankSum=-3.932;SOR=0.730 GT:AD:DP:GQ:PL 0/1:21,17:38:99:301,0,431
CP000253.1 292681 . T G 59.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.128;DP=30;Dels=0.00;ExcessHet=3.0103;FS=1.856;HaplotypeScore=7.1689;MLEAC=1;MLEAF=0.500;MQ=54.05;MQ0=4;MQRankSum=-3.407;QD=1.99;ReadPosRankSum=-1.220;SOR=1.329 GT:AD:DP:GQ:PL 0/1:20,10:30:88:88,0,420
CP000253.1 292684 . A G 54.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.190;DP=30;Dels=0.00;ExcessHet=3.0103;FS=1.856;HaplotypeScore=7.2527;MLEAC=1;MLEAF=0.500;MQ=54.05;MQ0=4;MQRankSum=-3.407;QD=1.83;ReadPosRankSum=-1.160;SOR=1.329 GT:AD:DP:GQ:PL 0/1:20,10:30:83:83,0,437
CP000253.1 292705 . A G 71.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.781;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=50.44;MQ0=4;MQRankSum=-3.240;QD=3.26;ReadPosRankSum=-2.408;SOR=1.329 GT:AD:DP:GQ:PL 0/1:12,10:22:99:100,0,270
CP000253.1 292759 . C T 348.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=50.63;MQ0=4;QD=19.38;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,18:18:27:377,27,0
CP000253.1 292813 . A G 280.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.17;MQ0=2;QD=18.72;SOR=0.836 GT:AD:DP:GQ:PL 1/1:2,13:15:21:309,21,0
CP000253.1 292839 . G A 271.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.17;MQ0=2;QD=18.12;SOR=0.836 GT:AD:DP:GQ:PL 1/1:2,13:15:21:300,21,0
CP000253.1 292840 . G T 280.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.17;MQ0=2;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:15:21:309,21,0
CP000253.1 292841 . C T 271.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.17;MQ0=2;QD=18.12;SOR=0.836 GT:AD:DP:GQ:PL 1/1:2,13:15:21:300,21,0
CP000253.1 292843 . T A 279.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.17;MQ0=2;QD=21.52;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:15:21:308,21,0
CP000253.1 292870 . C T 39.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.11;MQ0=0;MQRankSum=1.655;QD=3.06;ReadPosRankSum=-0.075;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,4:13:68:68,0,199
CP000253.1 292879 . C A,T 259.77 . AC=1,1;AF=0.500,0.500;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=57.11;MQ0=0;QD=19.98;SOR=0.836 GT:AD:DP:GQ:PL 1/2:0,9,4:13:68:288,84,68,204,0,198
CP000253.1 292882 . A G 167.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.094;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.11;MQ0=0;MQRankSum=-1.655;QD=12.91;ReadPosRankSum=-0.082;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,9:13:68:196,0,68
CP000253.1 292891 . A G 170.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.736;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.11;MQ0=0;MQRankSum=-1.655;QD=13.14;ReadPosRankSum=-0.375;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,9:13:68:199,0,68
CP000253.1 292897 . T A 165.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.396;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.11;MQ0=0;MQRankSum=-1.655;QD=12.75;ReadPosRankSum=-0.526;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,9:13:68:194,0,68
CP000253.1 292901 . T C 39.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.396;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.11;MQ0=0;MQRankSum=1.655;QD=3.06;ReadPosRankSum=0.980;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,4:13:68:68,0,198
CP000253.1 292912 . A T 39.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.11;MQ0=0;MQRankSum=1.655;QD=3.06;ReadPosRankSum=0.980;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,4:13:68:68,0,196
CP000253.1 292942 . A G 162.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.203;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=55.75;MQ0=0;MQRankSum=-0.198;QD=9.57;ReadPosRankSum=-0.801;SOR=0.892 GT:AD:DP:GQ:PL 0/1:8,9:17:99:191,0,152
CP000253.1 292966 . T C 280.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.46;MQ0=0;QD=20.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:309,21,0
CP000253.1 292982 . T A 315.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.46;MQ0=0;QD=22.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:344,24,0
CP000253.1 293008 . A G 34.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;DP=10;Dels=0.00;ExcessHet=3.0103;FS=3.310;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.59;MQ0=0;MQRankSum=0.967;QD=3.48;ReadPosRankSum=-0.524;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,2:10:63:63,0,161
CP000253.1 293011 . A G 34.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;DP=10;Dels=0.00;ExcessHet=3.0103;FS=3.310;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.59;MQ0=0;MQRankSum=0.967;QD=3.48;ReadPosRankSum=-0.524;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,2:10:63:63,0,161
CP000253.1 293012 . A G 34.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;DP=10;Dels=0.00;ExcessHet=3.0103;FS=3.310;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.59;MQ0=0;MQRankSum=0.967;QD=3.48;ReadPosRankSum=-0.524;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,2:10:63:63,0,161
CP000253.1 293018 . G C 34.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;DP=10;Dels=0.00;ExcessHet=3.0103;FS=3.310;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.59;MQ0=0;MQRankSum=0.967;QD=3.48;ReadPosRankSum=-0.524;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,2:10:63:63,0,161
CP000253.1 293026 . T G 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 293057 . A C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.67;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 293066 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 293072 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 293325 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 293331 . A G 402.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.57;MQ0=2;QD=22.38;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,18:18:30:431,30,0
CP000253.1 293354 . T C 490.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.21;MQ0=2;QD=22.31;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,22:22:36:519,36,0
CP000253.1 293544 . G A 85.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.327;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9996;MLEAC=1;MLEAF=0.500;MQ=54.74;MQ0=2;MQRankSum=-4.632;QD=2.09;ReadPosRankSum=-3.857;SOR=0.892 GT:AD:DP:GQ:PL 0/1:30,11:41:99:114,0,614
CP000253.1 293583 . T C 596.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.623;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5901;MLEAC=1;MLEAF=0.500;MQ=49.66;MQ0=2;MQRankSum=5.039;QD=8.06;ReadPosRankSum=5.838;SOR=0.602 GT:AD:DP:GQ:PL 0/1:42,32:74:99:625,0,477
CP000253.1 293588 . C A 611.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.211;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.971;HaplotypeScore=8.8645;MLEAC=1;MLEAF=0.500;MQ=49.51;MQ0=2;MQRankSum=5.083;QD=9.56;ReadPosRankSum=5.167;SOR=0.601 GT:AD:DP:GQ:PL 0/1:33,31:73:99:640,0,270
CP000253.1 293592 . C T 592.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.984;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.900;HaplotypeScore=9.5985;MLEAC=1;MLEAF=0.500;MQ=49.51;MQ0=2;MQRankSum=4.960;QD=8.12;ReadPosRankSum=5.056;SOR=0.671 GT:AD:DP:GQ:PL 0/1:42,31:73:99:621,0,475
CP000253.1 293602 . C T 579.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.133;DP=72;Dels=0.00;ExcessHet=3.0103;FS=2.021;HaplotypeScore=2.6147;MLEAC=1;MLEAF=0.500;MQ=49.35;MQ0=2;MQRankSum=4.795;QD=8.17;ReadPosRankSum=4.626;SOR=0.833 GT:AD:DP:GQ:PL 0/1:42,29:72:99:608,0,473
CP000253.1 293619 . T C 624.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.225;DP=73;Dels=0.00;ExcessHet=3.0103;FS=2.402;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=48.70;MQ0=2;MQRankSum=4.590;QD=8.56;ReadPosRankSum=1.161;SOR=0.879 GT:AD:DP:GQ:PL 0/1:43,30:73:99:653,0,473
CP000253.1 293622 . A G 628.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.578;DP=71;Dels=0.00;ExcessHet=3.0103;FS=2.483;HaplotypeScore=2.8937;MLEAC=1;MLEAF=0.500;MQ=48.69;MQ0=2;MQRankSum=4.413;QD=8.86;ReadPosRankSum=0.394;SOR=0.875 GT:AD:DP:GQ:PL 0/1:41,30:71:99:657,0,433
CP000253.1 293628 . A G 628.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.319;DP=71;Dels=0.00;ExcessHet=3.0103;FS=2.483;HaplotypeScore=4.8932;MLEAC=1;MLEAF=0.500;MQ=48.69;MQ0=2;MQRankSum=4.413;QD=8.86;ReadPosRankSum=-0.115;SOR=0.875 GT:AD:DP:GQ:PL 0/1:41,30:71:99:657,0,430
CP000253.1 293634 . A G 642.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.078;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9976;MLEAC=1;MLEAF=0.500;MQ=57.30;MQ0=0;MQRankSum=1.990;QD=15.30;ReadPosRankSum=0.349;SOR=0.976 GT:AD:DP:GQ:PL 0/1:12,30:42:99:671,0,195
CP000253.1 293637 . C T 688.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.616;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9976;MLEAC=1;MLEAF=0.500;MQ=57.30;MQ0=0;MQRankSum=2.580;QD=16.40;ReadPosRankSum=0.059;SOR=0.957 GT:AD:DP:GQ:PL 0/1:10,32:42:99:717,0,150
CP000253.1 293643 . A G 930.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8917;MLEAC=2;MLEAF=1.00;MQ=57.30;MQ0=0;QD=23.27;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:42:66:959,66,0
CP000253.1 293655 . T A 891.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5774;MLEAC=2;MLEAF=1.00;MQ=57.42;MQ0=0;QD=24.10;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:38:63:920,63,0
CP000253.1 293658 . A G 86.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.519;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5770;MLEAC=1;MLEAF=0.500;MQ=57.48;MQ0=0;MQRankSum=-0.666;QD=2.48;ReadPosRankSum=1.692;SOR=0.404 GT:AD:DP:GQ:PL 0/1:27,8:35:99:115,0,635
CP000253.1 293664 . A G 282.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.713;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4362;MLEAC=1;MLEAF=0.500;MQ=56.87;MQ0=0;MQRankSum=-0.037;QD=11.78;ReadPosRankSum=0.029;SOR=0.976 GT:AD:DP:GQ:PL 0/1:10,14:24:99:311,0,175
CP000253.1 293665 . A C 281.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.276;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4362;MLEAC=1;MLEAF=0.500;MQ=56.87;MQ0=0;MQRankSum=-0.037;QD=11.74;ReadPosRankSum=0.029;SOR=0.976 GT:AD:DP:GQ:PL 0/1:10,14:24:99:310,0,181
CP000253.1 293667 . T A 503.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8578;MLEAC=1;MLEAF=0.500;MQ=56.87;MQ0=0;QD=22.90;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:24:36:525,36,0
CP000253.1 293668 . A G 585.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8578;MLEAC=2;MLEAF=1.00;MQ=57.12;MQ0=0;QD=22.53;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:614,42,0
CP000253.1 293672 . A T 279.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.179;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8577;MLEAC=1;MLEAF=0.500;MQ=57.12;MQ0=0;MQRankSum=-0.297;QD=10.76;ReadPosRankSum=0.696;SOR=0.976 GT:AD:DP:GQ:PL 0/1:12,14:26:99:308,0,222
CP000253.1 293679 . T A 282.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.280;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8582;MLEAC=1;MLEAF=0.500;MQ=57.12;MQ0=0;MQRankSum=-0.037;QD=11.78;ReadPosRankSum=-0.323;SOR=0.976 GT:AD:DP:GQ:PL 0/1:10,14:26:99:311,0,181
CP000253.1 293682 . C T 622.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9915;MLEAC=2;MLEAF=1.00;MQ=57.23;MQ0=0;QD=23.07;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:651,45,0
CP000253.1 293689 . A G 146.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.469;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=57.07;MQ0=0;MQRankSum=0.360;QD=5.44;ReadPosRankSum=1.586;SOR=0.593 GT:AD:DP:GQ:PL 0/1:17,10:27:99:175,0,390
CP000253.1 293690 . C A 146.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.151;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=57.07;MQ0=0;MQRankSum=0.360;QD=5.44;ReadPosRankSum=1.586;SOR=0.593 GT:AD:DP:GQ:PL 0/1:17,10:27:99:175,0,390
CP000253.1 293695 . C G 146.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.256;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=57.07;MQ0=0;MQRankSum=0.360;QD=5.44;ReadPosRankSum=1.988;SOR=0.593 GT:AD:DP:GQ:PL 0/1:17,10:27:99:175,0,390
CP000253.1 293699 . G C 361.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.163;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=57.07;MQ0=0;MQRankSum=-0.300;QD=13.40;ReadPosRankSum=-2.240;SOR=0.804 GT:AD:DP:GQ:PL 0/1:10,17:27:99:390,0,175
CP000253.1 293703 . A G 361.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.371;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=57.07;MQ0=0;MQRankSum=-0.300;QD=13.40;ReadPosRankSum=-2.392;SOR=0.804 GT:AD:DP:GQ:PL 0/1:10,17:27:99:390,0,175
CP000253.1 293706 . G A 625.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=57.07;MQ0=0;QD=23.18;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:654,45,0
CP000253.1 293710 . A G 143.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.519;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.28;MQ0=0;MQRankSum=0.168;QD=4.96;ReadPosRankSum=3.473;SOR=0.602 GT:AD:DP:GQ:PL 0/1:19,10:29:99:172,0,429
CP000253.1 293736 . C T 630.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.86;MQ0=0;QD=22.53;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:659,45,0
CP000253.1 293842 . G A 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.01;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 293844 . A C 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.01;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 293845 . A G 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.01;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 293847 . T A 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.01;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 293865 . T A 126.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6640;MLEAC=1;MLEAF=0.500;MQ=53.01;MQ0=0;MQRankSum=-0.619;QD=15.85;ReadPosRankSum=-0.619;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,6:8:30:155,0,30
CP000253.1 293881 . A T 220.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.32;MQ0=0;QD=24.54;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:249,18,0
CP000253.1 293976 . C T 346.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=53.14;MQ0=0;QD=20.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:375,27,0
CP000253.1 293988 . T C 65.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=1;MLEAF=0.500;MQ=54.17;MQ0=0;MQRankSum=-1.502;QD=3.29;ReadPosRankSum=-2.767;SOR=0.693 GT:AD:DP:GQ:PL 0/1:14,6:20:94:94,0,279
CP000253.1 293994 . G A 577.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=55.57;MQ0=0;QD=22.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:606,42,0
CP000253.1 294000 . T G 659.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=56.18;MQ0=0;QD=21.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:688,48,0
CP000253.1 294004 . T A 656.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=56.18;MQ0=0;QD=21.89;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:685,48,0
CP000253.1 294021 . C T 181.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.127;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=1;MLEAF=0.500;MQ=56.54;MQ0=0;MQRankSum=-1.073;QD=5.51;ReadPosRankSum=-1.407;SOR=0.610 GT:AD:DP:GQ:PL 0/1:21,12:33:99:210,0,460
CP000253.1 294034 . G A 181.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.575;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=56.54;MQ0=0;MQRankSum=-1.073;QD=5.51;ReadPosRankSum=-0.731;SOR=0.610 GT:AD:DP:GQ:PL 0/1:21,12:33:99:210,0,458
CP000253.1 294094 . C T 974.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.970;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9317;MLEAC=2;MLEAF=1.00;MQ=53.42;MQ0=6;MQRankSum=-0.844;QD=17.41;ReadPosRankSum=2.209;SOR=0.776 GT:AD:DP:GQ:PL 1/1:2,54:56:30:1003,30,0
CP000253.1 294099 . C T 729.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.922;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9987;MLEAC=1;MLEAF=0.500;MQ=53.42;MQ0=6;MQRankSum=1.098;QD=13.51;ReadPosRankSum=0.186;SOR=0.617 GT:AD:DP:GQ:PL 0/1:17,37:56:99:758,0,152
CP000253.1 294112 . G A 1057.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=53.42;MQ0=6;QD=18.89;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,56:56:75:1086,75,0
CP000253.1 294143 . G A 75.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.196;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9943;MLEAC=1;MLEAF=0.500;MQ=53.62;MQ0=6;MQRankSum=-0.402;QD=1.31;ReadPosRankSum=0.337;SOR=0.708 GT:AD:DP:GQ:PL 0/1:43,15:58:99:104,0,840
CP000253.1 294148 . C T 164.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.003;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9926;MLEAC=1;MLEAF=0.500;MQ=53.62;MQ0=6;MQRankSum=-0.725;QD=2.84;ReadPosRankSum=-1.234;SOR=0.657 GT:AD:DP:GQ:PL 0/1:39,19:58:99:193,0,751
CP000253.1 294151 . T C 75.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.052;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9934;MLEAC=1;MLEAF=0.500;MQ=53.62;MQ0=6;MQRankSum=-0.402;QD=1.31;ReadPosRankSum=0.112;SOR=0.708 GT:AD:DP:GQ:PL 0/1:43,15:58:99:104,0,857
CP000253.1 294152 . G A 75.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.194;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9934;MLEAC=1;MLEAF=0.500;MQ=53.62;MQ0=6;MQRankSum=-0.402;QD=1.31;ReadPosRankSum=0.022;SOR=0.708 GT:AD:DP:GQ:PL 0/1:43,15:58:99:104,0,856
CP000253.1 294154 . A G,T 1001.77 . AC=1,1;AF=0.500,0.500;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.9958;MLEAC=1,1;MLEAF=0.500,0.500;MQ=53.62;MQ0=6;QD=17.27;SOR=0.853 GT:AD:DP:GQ:PL 1/2:0,43,15:58:99:1030,167,104,863,0,851
CP000253.1 294163 . A G 72.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.605;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4398;MLEAC=1;MLEAF=0.500;MQ=53.77;MQ0=6;MQRankSum=-0.240;QD=1.21;ReadPosRankSum=-0.215;SOR=0.714 GT:AD:DP:GQ:PL 0/1:45,15:60:99:101,0,889
CP000253.1 294169 . A G 775.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.883;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4423;MLEAC=1;MLEAF=0.500;MQ=53.77;MQ0=6;MQRankSum=0.479;QD=12.93;ReadPosRankSum=1.219;SOR=0.722 GT:AD:DP:GQ:PL 0/1:19,41:60:99:804,0,190
CP000253.1 294178 . A G 72.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.933;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5744;MLEAC=1;MLEAF=0.500;MQ=53.77;MQ0=6;MQRankSum=-0.240;QD=1.21;ReadPosRankSum=-0.473;SOR=0.714 GT:AD:DP:GQ:PL 0/1:45,15:60:99:101,0,891
CP000253.1 294193 . C T 768.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=58.11;MQ0=0;QD=21.35;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:54:797,54,0
CP000253.1 294196 . C T 714.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4715;MLEAC=2;MLEAF=1.00;MQ=58.05;MQ0=0;QD=21.02;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:51:743,51,0
CP000253.1 294217 . G A 534.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.5784;MLEAC=2;MLEAF=1.00;MQ=58.69;MQ0=0;QD=20.57;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:39:563,39,0
CP000253.1 294220 . T C 549.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.69;MQ0=0;QD=21.14;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:39:578,39,0
CP000253.1 294244 . A T 428.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.10;MQ0=0;QD=23.82;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,18:18:33:457,33,0
CP000253.1 294250 . A T 184.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.13;MQ0=0;QD=20.54;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:15:213,15,0
CP000253.1 294253 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.62;MQ0=0;QD=18.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:12:175,12,0
CP000253.1 294382 . G A 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 294403 . C T 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 294413 . A G 233.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:262,18,0
CP000253.1 294418 . A T 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 294424 . A G 233.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:262,18,0
CP000253.1 294433 . A G 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 294469 . C T 319.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:348,24,0
CP000253.1 294499 . C T 508.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:537,36,0
CP000253.1 294505 . A G 508.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:537,36,0
CP000253.1 294512 . A G 504.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:533,36,0
CP000253.1 294523 . T A 548.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.95;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:577,39,0
CP000253.1 294525 . T C 535.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.43;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:564,39,0
CP000253.1 294552 . C A 553.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:39:582,39,0
CP000253.1 294574 . G C 642.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:45:671,45,0
CP000253.1 294586 . G T 728.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.235;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.43;ReadPosRankSum=-0.255;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,33:34:51:757,51,0
CP000253.1 294588 . C T 723.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.93;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:51:752,51,0
CP000253.1 294597 . A G 773.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:802,54,0
CP000253.1 294601 . A G 721.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:51:750,51,0
CP000253.1 294633 . T C 598.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.65;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:42:627,42,0
CP000253.1 294651 . A C 636.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.96;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:665,45,0
CP000253.1 294679 . C T 544.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:573,39,0
CP000253.1 294680 . A T 520.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.70;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:549,39,0
CP000253.1 294689 . A C 542.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:571,39,0
CP000253.1 294709 . G T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 294803 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 294903 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 294904 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 294907 . T G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 294916 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 294918 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 294920 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 294956 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 295119 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 295120 . A T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 295394 . T C 306.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.45;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:335,24,0
CP000253.1 295582 . A G 118.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:146,12,0
CP000253.1 295697 . C T 181.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:210,15,0
CP000253.1 295730 . A T 217.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:246,18,0
CP000253.1 295775 . G A 450.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:33:479,33,0
CP000253.1 296069 . A G 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 296258 . T C 399.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.21;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:428,30,0
CP000253.1 296264 . T C 405.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.36;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:434,30,0
CP000253.1 296278 . T A 370.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.60;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:27:399,27,0
CP000253.1 296314 . A T 400.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:429,30,0
CP000253.1 296695 . A G 2158.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5059;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2187,150,0
CP000253.1 296701 . T A 2157.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.0888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2186,151,0
CP000253.1 296830 . T C 477.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:36:506,36,0
CP000253.1 296941 . A G 1204.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:52:87:1233,87,0
CP000253.1 296944 . G A 1235.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1264,87,0
CP000253.1 296956 . A T 1165.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1194,84,0
CP000253.1 296959 . G A 1203.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1232,87,0
CP000253.1 296965 . C T 1219.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1248,87,0
CP000253.1 297000 . A G 1090.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1119,78,0
CP000253.1 297001 . T C 1001.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1030,72,0
CP000253.1 297019 . C A 1015.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1044,72,0
CP000253.1 297100 . C T 633.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.56;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:48:662,48,0
CP000253.1 297127 . G A 591.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:45:620,45,0
CP000253.1 297184 . A G 717.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:746,54,0
CP000253.1 297218 . T C 529.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:558,39,0
CP000253.1 297220 . C T 508.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:537,39,0
CP000253.1 297277 . A T 499.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:39:528,39,0
CP000253.1 297279 . C A 474.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:503,36,0
CP000253.1 297291 . A G 478.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:507,36,0
CP000253.1 297292 . A G 539.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:42:568,42,0
CP000253.1 297293 . C T 544.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.24;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:42:573,42,0
CP000253.1 297300 . T A 529.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:24:39:558,39,0
CP000253.1 297328 . G A 854.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7732;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:63:883,63,0
CP000253.1 297334 . A G 845.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:63:874,63,0
CP000253.1 297342 . G T 904.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:66:933,66,0
CP000253.1 297343 . T C 905.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:66:934,66,0
CP000253.1 297376 . T G 1012.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:75:1041,75,0
CP000253.1 297380 . T G 1022.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:75:1051,75,0
CP000253.1 297432 . G A 1217.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1246,87,0
CP000253.1 297440 . A C 1278.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.744;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.59;ReadPosRankSum=-0.333;SOR=0.669 GT:AD:DP:GQ:PL 1/1:1,51:52:93:1307,93,0
CP000253.1 297450 . T G 1093.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6687;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1122,78,0
CP000253.1 297529 . G C 1035.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1064,75,0
CP000253.1 297663 . G C 867.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:63:896,63,0
CP000253.1 297678 . C A 961.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:69:990,69,0
CP000253.1 297696 . A T 1000.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.74;ReadPosRankSum=1.419;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,43:44:72:1029,72,0
CP000253.1 297702 . T C 1087.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.20;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:78:1116,78,0
CP000253.1 297708 . G T 1112.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4095;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:49:78:1141,78,0
CP000253.1 297860 . G A 2340.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.988;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.26;ReadPosRankSum=0.980;SOR=0.693 GT:AD:DP:GQ:PL 1/1:1,79:80:99:2369,172,0
CP000253.1 297861 . G A 2393.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.92;SOR=1.639 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2422,175,0
CP000253.1 297870 . G T 2400.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.39;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,79:80:99:2429,175,0
CP000253.1 297873 . A C 2368.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.61;SOR=1.639 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2397,175,0
CP000253.1 297876 . C T 2432.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.41;SOR=1.639 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2461,178,0
CP000253.1 297882 . T A 2548.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.34;SOR=1.666 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2577,187,0
CP000253.1 297891 . G T 2271.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.29;SOR=1.771 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2300,169,0
CP000253.1 297893 . G T 2286.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.023;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=30.49;ReadPosRankSum=-1.001;SOR=0.776 GT:AD:DP:GQ:PL 1/1:1,74:75:99:2315,169,0
CP000253.1 297897 . A G 2236.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.23;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,74:75:99:2265,166,0
CP000253.1 297900 . G A 2254.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.06;SOR=1.771 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2283,169,0
CP000253.1 297903 . C T 2293.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.58;SOR=1.771 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2322,172,0
CP000253.1 297914 . A C 4080.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3745;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=0.671;SOR=0.797 GT:AD:DP:GQ:PL 1/1:1,159:161:99:4109,292,0
CP000253.1 298092 . G A 6116.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,244:244:99:6145,433,0
CP000253.1 298269 . C T 1635.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1423;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1664,120,0
CP000253.1 298635 . C A 1080.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1109,78,0
CP000253.1 300942 . T C 3629.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3658,256,0
CP000253.1 301185 . C T 1258.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:52:90:1287,90,0
CP000253.1 301208 . G A 1439.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.752;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.60;ReadPosRankSum=-1.397;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1468,105,0
CP000253.1 301211 . G A 1552.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1581,111,0
CP000253.1 301232 . A G 1655.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1684,117,0
CP000253.1 301259 . G A 2127.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2487;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2156,151,0
CP000253.1 301265 . T C 2063.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2487;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2092,147,0
CP000253.1 301268 . G A 2099.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2487;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2128,150,0
CP000253.1 301271 . A T 2126.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2155,151,0
CP000253.1 301284 . G C 2178.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0293;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2207,154,0
CP000253.1 301296 . C T 2442.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2471,172,0
CP000253.1 301667 . A G 1605.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0473;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1634,114,0
CP000253.1 302061 . C A 2841.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,124:124:99:2870,196,0
CP000253.1 302275 . C T 132.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:160,12,0
CP000253.1 302394 . T A 385.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.56;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:30:414,30,0
CP000253.1 302456 . G A 864.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.02;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,32:33:63:893,63,0
CP000253.1 302642 . G A 1614.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1643,117,0
CP000253.1 302930 . T C 3610.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1002;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,139:141:99:3639,262,0
CP000253.1 303260 . T A 3350.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.925;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5176;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=0.510;SOR=0.802 GT:AD:DP:GQ:PL 1/1:1,128:129:99:3379,238,0
CP000253.1 303281 . G A 2621.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.017;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.96;ReadPosRankSum=0.480;SOR=0.902 GT:AD:DP:GQ:PL 1/1:1,100:102:99:2650,187,0
CP000253.1 303283 . C T 2645.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=1.167 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2674,193,0
CP000253.1 303287 . A T 2672.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4853;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.00;SOR=1.145 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2701,193,0
CP000253.1 303293 . G A 2628.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3308;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=1.059 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2657,190,0
CP000253.1 303350 . T C 1695.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2846;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1724,123,0
CP000253.1 303407 . A T 1206.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2839;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:47:90:1235,90,0
CP000253.1 303474 . T A 391.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:30:420,30,0
CP000253.1 303477 . C A 388.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.77;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:30:417,30,0
CP000253.1 303479 . G A 388.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.77;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:30:417,30,0
CP000253.1 303514 . C T 353.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:27:382,27,0
CP000253.1 303663 . T C 693.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:29:51:722,51,0
CP000253.1 303987 . A G 2668.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3677;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2697,187,0
CP000253.1 304334 . A C 4581.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7129;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4610,319,0
CP000253.1 304637 . T C 2578.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2607,184,0
CP000253.1 304709 . G A 4255.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4284,304,0
CP000253.1 305146 . A G 5055.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,191:191:99:5084,364,0
CP000253.1 305863 . A C 1283.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.692;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.68;ReadPosRankSum=-0.035;SOR=0.829 GT:AD:DP:GQ:PL 1/1:1,49:50:93:1312,93,0
CP000253.1 305911 . C T 757.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.06;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:57:786,57,0
CP000253.1 305944 . G A 772.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.60;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:57:801,57,0
CP000253.1 305950 . T C 770.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:57:799,57,0
CP000253.1 305960 . C T 807.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:60:836,60,0
CP000253.1 305965 . T C 815.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:60:844,60,0
CP000253.1 305981 . C T 785.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:57:814,57,0
CP000253.1 305990 . A G 651.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:680,48,0
CP000253.1 306004 . C T 622.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:651,45,0
CP000253.1 306010 . T C 621.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:650,45,0
CP000253.1 306061 . C T 277.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:306,21,0
CP000253.1 306064 . A G 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 306079 . T G 231.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:260,18,0
CP000253.1 306082 . T C 231.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:260,18,0
CP000253.1 306103 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 306169 . T G 352.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:381,27,0
CP000253.1 306193 . T C 431.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:460,33,0
CP000253.1 306220 . G A 411.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:440,33,0
CP000253.1 306326 . C T 2517.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=1.037 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2546,181,0
CP000253.1 306328 . A G 2538.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=1.037 GT:AD:DP:GQ:PL 1/1:0,99:102:99:2567,181,0
CP000253.1 306352 . A G 3243.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=1.135 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3272,232,0
CP000253.1 306373 . A T 3662.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9881;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3691,259,0
CP000253.1 306409 . C T 4476.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,192:192:99:4505,310,0
CP000253.1 306441 . C G 5710.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,238:238:99:5739,397,0
CP000253.1 306451 . A G 5912.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.925;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.75;ReadPosRankSum=-0.585;SOR=0.626 GT:AD:DP:GQ:PL 1/1:1,248:249:99:5941,415,0
CP000253.1 306460 . C T 5944.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.986 GT:AD:DP:GQ:PL 1/1:0,246:249:99:5973,415,0
CP000253.1 306466 . G T 6006.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6035,418,0
CP000253.1 306472 . C A 5945.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.796;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8959;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.07;ReadPosRankSum=-1.556;SOR=0.570 GT:AD:DP:GQ:PL 1/1:2,245:248:99:5974,415,0
CP000253.1 306475 . A G 5855.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.926 GT:AD:DP:GQ:PL 1/1:0,246:248:99:5884,409,0
CP000253.1 306481 . T G 5970.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.974;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.88;ReadPosRankSum=0.936;SOR=0.317 GT:AD:DP:GQ:PL 1/1:1,249:250:99:5999,418,0
CP000253.1 306485 . A T 6032.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6061,424,0
CP000253.1 306488 . T G 6041.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.095;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.17;ReadPosRankSum=1.130;SOR=0.317 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6070,424,0
CP000253.1 306526 . T C 5826.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6235;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,245:246:99:5855,409,0
CP000253.1 306538 . T A 5879.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.891;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7284;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.10;ReadPosRankSum=0.447;SOR=0.311 GT:AD:DP:GQ:PL 1/1:1,243:244:99:5908,412,0
CP000253.1 306559 . G A 5805.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.0317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,236:238:99:5834,409,0
CP000253.1 306811 . A T 4830.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4859,340,0
CP000253.1 306926 . G T 3825.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7289;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,150:151:99:3854,274,0
CP000253.1 306944 . T C 3839.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3868,277,0
CP000253.1 306947 . C T 3960.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3989,283,0
CP000253.1 307009 . G T 2653.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2682,190,0
CP000253.1 307020 . C T 2588.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2617,187,0
CP000253.1 307052 . G A 2404.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,96:98:99:2433,172,0
CP000253.1 307086 . A G 2473.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2502,178,0
CP000253.1 307091 . C T 2471.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2500,178,0
CP000253.1 307095 . G A 2399.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2428,172,0
CP000253.1 307117 . T A 2535.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2564,181,0
CP000253.1 307393 . C T 5783.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,237:237:99:5812,406,0
CP000253.1 307402 . G A 5665.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.21;ReadPosRankSum=0.111;SOR=0.519 GT:AD:DP:GQ:PL 1/1:1,233:234:99:5694,400,0
CP000253.1 307417 . C T 5721.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,230:231:99:5750,406,0
CP000253.1 307504 . A G 5645.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.92;ReadPosRankSum=-1.042;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,235:238:99:5674,394,0
CP000253.1 307544 . C T 5053.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.830;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.5808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.40;ReadPosRankSum=1.572;SOR=0.234 GT:AD:DP:GQ:PL 1/1:1,215:218:99:5082,364,0
CP000253.1 308017 . G A 2736.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0534;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2765,196,0
CP000253.1 308037 . C T 2768.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.956 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2797,199,0
CP000253.1 308155 . A T 1747.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.584;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8462;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.62;ReadPosRankSum=1.710;SOR=0.283 GT:AD:DP:GQ:PL 1/1:1,73:76:99:1776,126,0
CP000253.1 308443 . C A 2174.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2203,154,0
CP000253.1 308777 . C T 5057.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.7009;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,200:201:99:5086,361,0
CP000253.1 308860 . C T 5412.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.755;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.2564;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.43;ReadPosRankSum=1.380;SOR=0.279 GT:AD:DP:GQ:PL 1/1:1,230:231:99:5441,382,0
CP000253.1 308914 . T A 4803.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.7396;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,204:204:99:4832,337,0
CP000253.1 308917 . A G 4718.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.2521;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,198:203:99:4747,334,0
CP000253.1 309058 . T C 3603.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=1.138 GT:AD:DP:GQ:PL 1/1:0,138:141:99:3632,262,0
CP000253.1 309091 . A G 2900.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9192;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.168 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2929,211,0
CP000253.1 309175 . A T 1573.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1602,114,0
CP000253.1 309289 . A G 2945.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.919;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6182;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.35;ReadPosRankSum=1.676;SOR=0.439 GT:AD:DP:GQ:PL 1/1:1,120:122:99:2974,211,0
CP000253.1 309954 . T G 4288.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.722;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.7215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.83;ReadPosRankSum=1.203;SOR=0.311 GT:AD:DP:GQ:PL 1/1:1,179:181:99:4317,281,0
CP000253.1 310278 . C A 5260.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.844;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.6492;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.41;ReadPosRankSum=1.122;SOR=0.317 GT:AD:DP:GQ:PL 1/1:1,206:207:99:5289,376,0
CP000253.1 310405 . G A 5842.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.9855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,224:226:99:5871,421,0
CP000253.1 310438 . G T 6087.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.491;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=41.0087;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.26;ReadPosRankSum=2.424;SOR=0.808 GT:AD:DP:GQ:PL 1/1:4,237:241:99:6116,439,0
CP000253.1 310462 . T C 6080.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.2048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,242:244:99:6109,442,0
CP000253.1 310716 . A T 3668.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4023;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3697,265,0
CP000253.1 310730 . A C 2484.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=274.4218;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2513,184,0
CP000253.1 310739 . A G 2397.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.895;DP=95;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=273.4220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.78;ReadPosRankSum=-1.443;SOR=0.301 GT:AD:DP:GQ:PL 1/1:1,92:94:99:2426,141,0
CP000253.1 310742 . A G 2428.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=271.4890;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2457,178,0
CP000253.1 310745 . A C 2417.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.822;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.45;ReadPosRankSum=-1.297;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2446,138,0
CP000253.1 310746 . T G 2478.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.062;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.09;ReadPosRankSum=-1.297;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2507,156,0
CP000253.1 310748 . T A 2481.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.587;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.12;ReadPosRankSum=-1.298;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2510,144,0
CP000253.1 310765 . A G 2746.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2775,196,0
CP000253.1 310806 . G A 2977.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7084;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3006,214,0
CP000253.1 310914 . C T 1152.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:84:1181,84,0
CP000253.1 311058 . A G 3201.82 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3009;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3231,226,0
CP000253.1 311112 . A T 3591.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3620,250,0
CP000253.1 311160 . A G 4093.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.39;ReadPosRankSum=-0.297;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,174:175:99:4122,289,0
CP000253.1 311316 . A G 3048.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3077,217,0
CP000253.1 311487 . C T 1076.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,41:41:78:1105,78,0
CP000253.1 311839 . C G 3066.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=1.115 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3095,217,0
CP000253.1 312295 . T C 2636.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2665,190,0
CP000253.1 312372 . T C 2685.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2384;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,106:109:99:2714,196,0
CP000253.1 312454 . A G 2761.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2790,196,0
CP000253.1 312512 . C T 2725.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.753;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.24;ReadPosRankSum=0.931;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,107:108:99:2754,196,0
CP000253.1 312572 . T C 2600.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6018;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=24.31;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,107:108:99:2629,187,0
CP000253.1 312593 . C T 2147.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.574;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=97.1538;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.60;ReadPosRankSum=-0.826;SOR=0.145 GT:AD:DP:GQ:PL 1/1:2,89:92:99:2176,154,0
CP000253.1 312643 . C T 2602.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2631,190,0
CP000253.1 312817 . C T 2446.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8256;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2475,178,0
CP000253.1 312847 . T A 2279.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2308,163,0
CP000253.1 312852 . A C 2319.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2348,168,0
CP000253.1 312895 . G T 2877.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.654;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.81;ReadPosRankSum=-0.870;SOR=0.293 GT:AD:DP:GQ:PL 1/1:1,115:116:99:2906,185,0
CP000253.1 312973 . T C 4052.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.6086;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.71;ReadPosRankSum=1.576;SOR=0.695 GT:AD:DP:GQ:PL 1/1:1,163:166:99:4081,292,0
CP000253.1 313006 . C A 4712.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.917;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9373;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.20;ReadPosRankSum=1.548;SOR=0.729 GT:AD:DP:GQ:PL 1/1:1,186:187:99:4741,334,0
CP000253.1 313151 . C G 5688.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,225:228:99:5717,415,0
CP000253.1 313239 . A G 6465.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.9507;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=0.858 GT:AD:DP:GQ:PL 1/1:0,247:248:99:6494,466,0
CP000253.1 313240 . T C 6316.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.4640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6345,454,0
CP000253.1 313393 . C T 5238.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8163;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,200:201:99:5267,376,0
CP000253.1 313450 . C T 5642.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2568;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.74;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,211:212:99:5671,403,0
CP000253.1 313486 . C T 5468.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,207:208:99:5497,394,0
CP000253.1 313558 . A G 5194.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,208:208:99:5223,367,0
CP000253.1 313621 . G A 6113.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6142,430,0
CP000253.1 314012 . T C 299.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:328,24,0
CP000253.1 314128 . A G 225.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:254,18,0
CP000253.1 314164 . A G 126.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.01;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:154,12,0
CP000253.1 314449 . T C 2198.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=76.4941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.19;SOR=1.670 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2227,160,0
CP000253.1 314454 . T C 2095.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=73.4249;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.58;SOR=1.704 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2124,156,0
CP000253.1 314505 . T C 2534.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2563,184,0
CP000253.1 314598 . T C 3893.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3922,277,0
CP000253.1 314854 . A T 5594.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.665;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5426;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=0.000;QD=24.12;ReadPosRankSum=1.516;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,231:233:99:5623,403,0
CP000253.1 314985 . T C 4643.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,185:189:99:4672,331,0
CP000253.1 315339 . A G 3860.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5348;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3889,280,0
CP000253.1 315921 . C T 6959.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.29;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,246:248:99:6988,506,0
CP000253.1 316017 . A G 6045.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.489;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3865;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.99;ReadPosRankSum=1.207;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,223:225:99:6074,406,0
CP000253.1 316020 . A T 6080.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.912;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.03;ReadPosRankSum=1.163;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,224:225:99:6109,436,0
CP000253.1 316023 . T A 6164.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.073;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.64;ReadPosRankSum=-0.979;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,222:225:99:6193,442,0
CP000253.1 316079 . C A 6488.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.1370;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6517,467,0
CP000253.1 316158 . A G 6010.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.584;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9079;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.15;ReadPosRankSum=-1.849;SOR=0.702 GT:AD:DP:GQ:PL 1/1:2,237:239:99:6039,389,0
CP000253.1 316167 . G A 5995.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.657;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.4645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=-1.729;SOR=0.710 GT:AD:DP:GQ:PL 1/1:2,238:241:99:6024,397,0
CP000253.1 316183 . G A 6092.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.401;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.8877;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.18;ReadPosRankSum=-1.547;SOR=0.761 GT:AD:DP:GQ:PL 1/1:2,240:242:99:6121,410,0
CP000253.1 316356 . T G 4203.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8190;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.053 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4232,310,0
CP000253.1 316420 . T G 3960.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.23;ReadPosRankSum=0.034;SOR=0.906 GT:AD:DP:GQ:PL 1/1:1,150:151:99:3989,286,0
CP000253.1 316484 . A C 2793.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2822,202,0
CP000253.1 316645 . T C 1644.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1673,120,0
CP000253.1 316882 . T C 2019.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.736;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1669;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=-1.251;SOR=0.291 GT:AD:DP:GQ:PL 1/1:1,78:81:99:2048,147,0
CP000253.1 317020 . C T 3591.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8852;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3620,256,0
CP000253.1 317182 . A G 5799.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,249:249:99:5828,400,0
CP000253.1 317376 . G A 2117.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2146,147,0
CP000253.1 317452 . C A 710.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:739,51,0
CP000253.1 317989 . T C 4709.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.0900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.03;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,168:169:99:4738,343,0
CP000253.1 318180 . T C 5091.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.553;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3588;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.85;ReadPosRankSum=1.951;SOR=0.460 GT:AD:DP:GQ:PL 1/1:2,195:199:99:5120,367,0
CP000253.1 318185 . C T 5121.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.00;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,197:198:99:5150,367,0
CP000253.1 318333 . T A 4262.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.783;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0447;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.98;ReadPosRankSum=0.241;SOR=0.408 GT:AD:DP:GQ:PL 1/1:1,157:160:99:4291,310,0
CP000253.1 318356 . T A 4195.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4401;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,157:158:99:4224,301,0
CP000253.1 318365 . G A 4355.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6446;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4384,316,0
CP000253.1 318535 . G T 3530.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7492;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=1.001 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3559,253,0
CP000253.1 318615 . T G 3126.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7122;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3155,226,0
CP000253.1 318646 . T C 3373.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.064 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3402,241,0
CP000253.1 318842 . G A 875.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.25;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:66:904,66,0
CP000253.1 318843 . T C 799.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:60:828,60,0
CP000253.1 318856 . A G 892.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.90;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:66:921,66,0
CP000253.1 319632 . A G 4892.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,203:205:99:4921,346,0
CP000253.1 319730 . T A 4671.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5409;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4700,331,0
CP000253.1 319757 . A G 5207.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,200:200:99:5236,373,0
CP000253.1 319812 . G C 5161.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,199:199:99:5190,367,0
CP000253.1 319879 . C T 4641.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,190:191:99:4670,328,0
CP000253.1 319904 . T C 4163.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4192,295,0
CP000253.1 319914 . A C 4171.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.678;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.25;ReadPosRankSum=-0.350;SOR=0.843 GT:AD:DP:GQ:PL 1/1:2,170:172:99:4200,276,0
CP000253.1 320464 . A G 6191.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0015;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,234:236:99:6220,454,0
CP000253.1 320540 . A G 5993.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,237:238:99:6022,424,0
CP000253.1 320617 . G A 6214.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6243,445,0
CP000253.1 320872 . T A 4197.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4226,301,0
CP000253.1 321191 . T G 4787.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5263;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.805 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4816,346,0
CP000253.1 321213 . G A 4745.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9849;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4774,346,0
CP000253.1 321231 . G T 4769.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4271;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4798,340,0
CP000253.1 321243 . C A 4639.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.743;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.07;ReadPosRankSum=1.008;SOR=0.787 GT:AD:DP:GQ:PL 1/1:2,176:178:99:4668,331,0
CP000253.1 321483 . C T 3938.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.421;DP=158;Dels=0.00;ExcessHet=3.0103;FS=3.603;HaplotypeScore=15.2589;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=-0.033;SOR=0.759 GT:AD:DP:GQ:PL 1/1:1,157:158:99:3967,249,0
CP000253.1 321513 . C T 4613.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5555;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.07;ReadPosRankSum=0.646;SOR=0.445 GT:AD:DP:GQ:PL 1/1:1,176:179:99:4642,331,0
CP000253.1 321519 . T A 4348.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.572;DP=169;Dels=0.00;ExcessHet=3.0103;FS=3.306;HaplotypeScore=18.0292;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.04;ReadPosRankSum=0.976;SOR=0.458 GT:AD:DP:GQ:PL 1/1:1,166:169:99:4377,287,0
CP000253.1 321531 . G A 4513.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9421;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,170:172:99:4542,328,0
CP000253.1 321552 . C T 5245.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,194:194:99:5274,376,0
CP000253.1 321555 . T C 5059.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,189:189:99:5088,364,0
CP000253.1 321573 . T C 5116.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.577;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6146;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=0.331;SOR=0.309 GT:AD:DP:GQ:PL 1/1:2,195:198:99:5145,370,0
CP000253.1 321587 . T C 4957.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4986,358,0
CP000253.1 321588 . A T 5002.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.33;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,190:190:99:5031,358,0
CP000253.1 321594 . T A 5491.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,213:213:99:5520,391,0
CP000253.1 321768 . C T 6487.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7639;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6516,481,0
CP000253.1 321804 . G C 6441.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.6996;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,247:250:99:6470,467,0
CP000253.1 321840 . T A 6836.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.910;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.4801;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.46;ReadPosRankSum=1.183;SOR=0.280 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6865,500,0
CP000253.1 321969 . C A 6604.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8492;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6633,473,0
CP000253.1 321970 . C A 6633.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9112;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.08;SOR=1.083 GT:AD:DP:GQ:PL 1/1:0,245:245:99:6662,476,0
CP000253.1 322066 . G A 5608.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,215:217:99:5637,397,0
CP000253.1 322086 . C T 5244.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.899;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=0.625;SOR=0.625 GT:AD:DP:GQ:PL 1/1:1,207:208:99:5273,373,0
CP000253.1 322093 . A C 4985.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6848;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,204:204:99:5014,355,0
CP000253.1 322180 . C G 2597.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.881;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.98;ReadPosRankSum=0.988;SOR=0.587 GT:AD:DP:GQ:PL 1/1:1,99:100:99:2626,190,0
CP000253.1 322459 . G A 4936.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.962;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2784;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.56;ReadPosRankSum=0.492;SOR=0.352 GT:AD:DP:GQ:PL 1/1:1,200:202:99:4965,352,0
CP000253.1 322487 . G A 5379.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,215:217:99:5408,379,0
CP000253.1 322519 . T C 5204.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6192;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,211:212:99:5233,370,0
CP000253.1 322522 . T C 5229.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4079;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,211:212:99:5258,373,0
CP000253.1 322558 . T C 5361.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.37;ReadPosRankSum=0.913;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,219:223:99:5390,379,0
CP000253.1 322876 . C G 3267.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3296,232,0
CP000253.1 322885 . C T 3286.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3315,232,0
CP000253.1 322897 . C T 3180.76 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0449;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.916 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3209,226,0
CP000253.1 322918 . T A 3421.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3450,244,0
CP000253.1 322927 . G T 3517.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3546,250,0
CP000253.1 322933 . C T 3246.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3275,232,0
CP000253.1 322936 . A T 3224.61 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1460;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,127:128:99:3253,229,0
CP000253.1 322939 . A C 3145.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.77;ReadPosRankSum=-0.682;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,126:127:99:3174,226,0
CP000253.1 323061 . C T 3467.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3496,241,0
CP000253.1 323101 . C T 2851.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8157;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2880,199,0
CP000253.1 323117 . G T 2638.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=23.77;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2667,187,0
CP000253.1 323122 . A G 2501.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0454;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=23.60;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2530,175,0
CP000253.1 323125 . G T 2391.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6037;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=22.78;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2420,169,0
CP000253.1 323128 . T G 2442.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.928;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3919;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=-0.070;QD=23.26;ReadPosRankSum=-0.413;SOR=0.346 GT:AD:DP:GQ:PL 1/1:1,104:105:99:2471,172,0
CP000253.1 323400 . A T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 323541 . C G 2648.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.926;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5848;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.23;ReadPosRankSum=1.703;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,113:114:99:2677,187,0
CP000253.1 323550 . G A 2745.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2774,193,0
CP000253.1 323685 . C T 3631.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1405;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3660,253,0
CP000253.1 323688 . G A 3709.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5293;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3738,259,0
CP000253.1 323760 . A C 3075.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.992;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.41;ReadPosRankSum=-1.444;SOR=0.351 GT:AD:DP:GQ:PL 1/1:1,125:126:99:3104,217,0
CP000253.1 323769 . T C 3014.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3043,214,0
CP000253.1 323802 . G T 2879.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.963;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6175;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.40;ReadPosRankSum=1.733;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,117:118:99:2908,205,0
CP000253.1 323805 . T C 2784.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4061;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:118:99:2813,199,0
CP000253.1 323808 . T G 2885.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2914,205,0
CP000253.1 323811 . A G 2863.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3999;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2892,205,0
CP000253.1 323820 . A G 3028.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4083;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3057,214,0
CP000253.1 323853 . T C 3081.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3110,220,0
CP000253.1 323987 . C T 3016.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3045,217,0
CP000253.1 324027 . G A 2981.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3010,211,0
CP000253.1 324057 . C T 2881.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4153;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2910,208,0
CP000253.1 324060 . T C 2874.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.876;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6114;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=1.338;SOR=0.277 GT:AD:DP:GQ:PL 1/1:1,113:115:99:2903,208,0
CP000253.1 324063 . T C 2819.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.73;ReadPosRankSum=1.186;SOR=0.277 GT:AD:DP:GQ:PL 1/1:1,113:115:99:2848,202,0
CP000253.1 324066 . A G 2962.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2991,214,0
CP000253.1 324075 . T C 3145.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3174,226,0
CP000253.1 324081 . G A 3216.73 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0388;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3245,232,0
CP000253.1 324114 . G A 2914.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,118:119:99:2943,208,0
CP000253.1 324117 . A G 2840.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,118:120:99:2869,205,0
CP000253.1 324150 . G A 2898.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2927,205,0
CP000253.1 324177 . A G 2425.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8441;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2454,175,0
CP000253.1 324201 . G T 2124.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:93:99:2153,150,0
CP000253.1 324204 . G A 2166.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2195,154,0
CP000253.1 324450 . T A 1614.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1643,117,0
CP000253.1 324451 . G A 1592.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1621,114,0
CP000253.1 324453 . C T 1646.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1675,120,0
CP000253.1 324468 . G A 1644.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.88;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1673,120,0
CP000253.1 324470 . A T 1618.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.44;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1647,117,0
CP000253.1 324529 . G A 2536.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3461;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2565,181,0
CP000253.1 324563 . T A 3342.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.315;DP=145;Dels=0.00;ExcessHet=3.0103;FS=2.028;HaplotypeScore=7.8933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.21;ReadPosRankSum=2.708;SOR=0.301 GT:AD:DP:GQ:PL 1/1:4,140:145:99:3371,141,0
CP000253.1 324565 . C T 3491.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3520,247,0
CP000253.1 324586 . T G 3832.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3301;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,160:160:99:3861,271,0
CP000253.1 324587 . C G 3811.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2242;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,159:160:99:3840,268,0
CP000253.1 324588 . T C 3904.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2242;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,159:160:99:3933,274,0
CP000253.1 324614 . T C 4052.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4081,286,0
CP000253.1 324698 . C T 4367.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,175:178:99:4396,310,0
CP000253.1 324812 . T C 3747.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9726;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3776,262,0
CP000253.1 325143 . T A 5946.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9736;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,243:244:99:5975,418,0
CP000253.1 325236 . C T 5876.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.5109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,237:238:99:5905,421,0
CP000253.1 325380 . A C 4567.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.983;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8954;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.95;ReadPosRankSum=0.876;SOR=0.621 GT:AD:DP:GQ:PL 1/1:1,175:177:99:4596,325,0
CP000253.1 325479 . C T 3324.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,121:122:99:3353,241,0
CP000253.1 325587 . G A 2047.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2076,147,0
CP000253.1 326030 . A G 3579.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3858;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3608,259,0
CP000253.1 326262 . A G 3546.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9687;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=26.47;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3575,256,0
CP000253.1 326266 . G T 3581.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.788;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6057;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=0.000;QD=26.53;ReadPosRankSum=0.912;SOR=0.669 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3610,259,0
CP000253.1 326675 . G A 3898.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.819;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.17;ReadPosRankSum=-0.035;SOR=0.356 GT:AD:DP:GQ:PL 1/1:1,148:150:99:3927,280,0
CP000253.1 327084 . T C 6626.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9901;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.27;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,243:245:99:6655,485,0
CP000253.1 327358 . G A 6448.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.9417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=0.977 GT:AD:DP:GQ:PL 1/1:0,245:247:99:6477,461,0
CP000253.1 327385 . T C 6381.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4354;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,243:244:99:6410,454,0
CP000253.1 327535 . A G 6204.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.849;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1374;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.82;ReadPosRankSum=1.026;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6233,442,0
CP000253.1 327670 . T C 6506.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.852;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.13;ReadPosRankSum=0.459;SOR=0.380 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6535,467,0
CP000253.1 327787 . A G 5978.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,239:241:99:6007,424,0
CP000253.1 328182 . T C 3838.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.84;SOR=1.063 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3867,277,0
CP000253.1 329113 . G A 3768.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8002;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,165:166:99:3797,262,0
CP000253.1 329137 . C T 3306.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3335,229,0
CP000253.1 329173 . A G 2945.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2974,208,0
CP000253.1 329261 . A G 679.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6996;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.32;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:26:51:708,51,0
CP000253.1 329292 . G A 509.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:538,39,0
CP000253.1 329567 . A G 1072.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6766;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1101,78,0
CP000253.1 329741 . G A 1467.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1318;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.91;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1496,102,0
CP000253.1 329862 . G A 1446.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.11;ReadPosRankSum=0.203;SOR=0.494 GT:AD:DP:GQ:PL 1/1:1,59:60:99:1475,105,0
CP000253.1 329966 . T A 666.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.67;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:51:695,51,0
CP000253.1 330092 . C A 617.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8318;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:646,45,0
CP000253.1 330358 . G T 3108.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3137,217,0
CP000253.1 330554 . A G 1653.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1682,117,0
CP000253.1 330665 . C T 1373.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:59:96:1402,96,0
CP000253.1 330729 . C A 621.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:45:650,45,0
CP000253.1 330761 . T G 356.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:385,27,0
CP000253.1 330827 . G A 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 330828 . T C 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 330850 . A T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 330982 . T G 347.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:376,27,0
CP000253.1 330984 . G A 360.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:389,27,0
CP000253.1 330987 . A G 356.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:385,27,0
CP000253.1 330993 . C T 348.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:377,27,0
CP000253.1 330996 . G T 359.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:388,27,0
CP000253.1 331008 . A G 357.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:386,27,0
CP000253.1 331018 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 331020 . T C 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 331025 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 331031 . G A 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 331032 . G A 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 331041 . A G 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 331063 . C T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 331065 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 331068 . T G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 331069 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 331072 . G A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 331073 . C T 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 331074 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 331080 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 331086 . T A 51.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:79,6,0
CP000253.1 331094 . A G 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 331095 . T C 39.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:67,6,0
CP000253.1 331098 . C T 54.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:82,6,0
CP000253.1 331101 . C T 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 331105 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 331144 . G A 135.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:163,12,0
CP000253.1 331147 . T A 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 331151 . C T 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 331153 . A G 137.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:165,12,0
CP000253.1 331155 . G A 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 331156 . T C 131.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:159,12,0
CP000253.1 331159 . C A 138.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:166,12,0
CP000253.1 331164 . G T 131.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:159,12,0
CP000253.1 331167 . A G 131.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:159,12,0
CP000253.1 331415 . A G 1966.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.618;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6305;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.14;ReadPosRankSum=-1.346;SOR=0.613 GT:AD:DP:GQ:PL 1/1:1,84:86:99:1995,141,0
CP000253.1 332009 . A G 1490.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.962;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.15;ReadPosRankSum=-0.517;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,56:57:99:1519,108,0
CP000253.1 332159 . A T 3123.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9664;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3152,223,0
CP000253.1 332549 . C T 4620.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7339;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,195:195:99:4649,322,0
CP000253.1 332561 . C T 4543.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3082;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,188:190:99:4572,316,0
CP000253.1 332784 . G A 542.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.93;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,17:17:42:571,42,0
CP000253.1 332978 . C T 207.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:236,18,0
CP000253.1 333116 . G T 4763.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0514;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=1.209 GT:AD:DP:GQ:PL 1/1:0,188:189:99:4792,337,0
CP000253.1 333207 . A C 6133.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.848;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.7766;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.63;ReadPosRankSum=0.765;SOR=0.570 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6162,439,0
CP000253.1 333254 . A T 6316.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3615;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.27;ReadPosRankSum=1.635;SOR=0.527 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6345,448,0
CP000253.1 333299 . T C 6022.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.755;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.1374;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.29;ReadPosRankSum=1.397;SOR=0.233 GT:AD:DP:GQ:PL 1/1:1,247:250:99:6051,433,0
CP000253.1 333305 . G T 6410.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.596;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.64;ReadPosRankSum=-0.560;SOR=0.759 GT:AD:DP:GQ:PL 1/1:2,248:250:99:6439,460,0
CP000253.1 333319 . A C 6496.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.652;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4765;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.41;ReadPosRankSum=1.642;SOR=0.796 GT:AD:DP:GQ:PL 1/1:2,244:246:99:6525,472,0
CP000253.1 333678 . G A 3758.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,142:144:99:3787,271,0
CP000253.1 333735 . C A 2559.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2588,184,0
CP000253.1 333852 . G C 3772.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2266;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=24.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3801,268,0
CP000253.1 334032 . G T 3142.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3528;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3171,220,0
CP000253.1 334102 . G A 2422.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2451,175,0
CP000253.1 334137 . T C 2347.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3339;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2376,169,0
CP000253.1 334638 . G A 3465.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6256;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=1.011 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3494,247,0
CP000253.1 334667 . C A 3651.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.792;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2768;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.36;ReadPosRankSum=1.095;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,143:145:99:3680,265,0
CP000253.1 334977 . C A 6145.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6174,436,0
CP000253.1 335323 . G T 4576.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3286;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4605,322,0
CP000253.1 335526 . C T 4108.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5545;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4137,289,0
CP000253.1 335631 . A T 3306.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.038;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.45;ReadPosRankSum=1.377;SOR=0.503 GT:AD:DP:GQ:PL 1/1:1,140:142:99:3335,229,0
CP000253.1 335668 . A G 2261.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2290,160,0
CP000253.1 335740 . G A 1416.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1445,105,0
CP000253.1 335814 . C T 837.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:60:866,60,0
CP000253.1 335832 . G A 858.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:63:887,63,0
CP000253.1 335837 . G A 903.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:66:932,66,0
CP000253.1 335842 . C T 952.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:37:69:981,69,0
CP000253.1 336064 . T C 3494.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.677;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6726;MLEAC=2;MLEAF=1.00;MQ=59.79;MQ0=0;MQRankSum=12.000;QD=24.44;ReadPosRankSum=1.333;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,142:144:99:3523,250,0
CP000253.1 336154 . A G 3674.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3053;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3703,259,0
CP000253.1 336244 . A G 3525.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,149:151:99:3554,247,0
CP000253.1 336555 . G A 1772.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1801,126,0
CP000253.1 336606 . G A 1646.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1675,117,0
CP000253.1 336613 . C T 1640.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4095;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1669,117,0
CP000253.1 336716 . A G 1041.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.515;DP=46;Dels=0.00;ExcessHet=3.0103;FS=3.310;HaplotypeScore=7.8955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.65;ReadPosRankSum=-1.281;SOR=0.578 GT:AD:DP:GQ:PL 1/1:1,45:46:49:1070,49,0
CP000253.1 336717 . A T 1121.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1150,81,0
CP000253.1 336754 . A T 1257.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.907;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9401;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=7.417;QD=23.29;ReadPosRankSum=1.415;SOR=0.402 GT:AD:DP:GQ:PL 1/1:1,53:55:90:1286,90,0
CP000253.1 336756 . A T 1225.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9321;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=22.70;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1254,87,0
CP000253.1 336758 . T A 1277.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9295;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=23.66;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:90:1306,90,0
CP000253.1 336759 . T A 1289.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6060;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=23.88;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1318,93,0
CP000253.1 336769 . T C 1419.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0738;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=0.000;QD=23.27;ReadPosRankSum=0.256;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1448,102,0
CP000253.1 336837 . G A 1701.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8455;MLEAC=2;MLEAF=1.00;MQ=56.67;MQ0=1;QD=23.64;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1730,123,0
CP000253.1 337002 . C T 728.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1952;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:54:757,54,0
CP000253.1 337019 . A T 817.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.26;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,30:30:60:846,60,0
CP000253.1 337370 . G C 4500.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1629;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4529,316,0
CP000253.1 337489 . G A 3370.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3399,241,0
CP000253.1 337654 . G T 423.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,18:18:33:452,33,0
CP000253.1 337746 . G A 256.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.10;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:21:285,21,0
CP000253.1 337752 . T C 242.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.35;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:21:271,21,0
CP000253.1 337765 . T C 218.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8662;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:247,18,0
CP000253.1 337785 . T A 85.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0
CP000253.1 337787 . T C 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 337788 . A C 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 337790 . T C 79.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:107,9,0
CP000253.1 337798 . T C 90.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0
CP000253.1 337801 . A G 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 337804 . G A 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 337806 . G T 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 337813 . A G 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 337816 . C T 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 337820 . A G 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 337824 . A G 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 337827 . T C 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 337828 . T G 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 337829 . T A 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 337832 . A G 89.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:117,9,0
CP000253.1 337835 . A G 79.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:107,9,0
CP000253.1 337836 . A G 81.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:109,9,0
CP000253.1 337839 . C T 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 337840 . A G 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 338569 . C T 344.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:373,27,0
CP000253.1 339067 . C A 5205.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.753;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1659;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.52;ReadPosRankSum=1.623;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,203:204:99:5234,373,0
CP000253.1 339444 . G A 3928.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3957,283,0
CP000253.1 339449 . A G 3286.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1952;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3315,238,0
CP000253.1 339510 . C T 2802.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,108:110:99:2831,205,0
CP000253.1 339558 . G A 2594.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2623,187,0
CP000253.1 339606 . A G 2510.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0275;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2539,181,0
CP000253.1 339699 . G A 2235.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2264,163,0
CP000253.1 339750 . G T 1832.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1861,132,0
CP000253.1 339792 . A G 1273.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1302,90,0
CP000253.1 339793 . C T 1351.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:96:1380,96,0
CP000253.1 339795 . T G 1330.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:96:1359,96,0
CP000253.1 339798 . T C 1351.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:96:1380,96,0
CP000253.1 340178 . A G 7127.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.734;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.51;ReadPosRankSum=0.887;SOR=0.723 GT:AD:DP:GQ:PL 1/1:1,249:250:99:7156,527,0
CP000253.1 340345 . T C 6587.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.488;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.4479;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.78;ReadPosRankSum=0.898;SOR=1.052 GT:AD:DP:GQ:PL 1/1:2,244:250:99:6616,485,0
CP000253.1 340601 . A G 5496.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.616;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=1.505;SOR=0.202 GT:AD:DP:GQ:PL 1/1:2,211:213:99:5525,391,0
CP000253.1 340725 . C T 2939.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6451;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,112:113:99:2968,208,0
CP000253.1 340765 . T G 2447.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=1.076 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2476,178,0
CP000253.1 340832 . G T 1351.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1380,102,0
CP000253.1 340834 . A G 1335.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1364,99,0
CP000253.1 340840 . G C 1414.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.74;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1443,105,0
CP000253.1 340859 . T A 1794.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.49;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1823,132,0
CP000253.1 340864 . T C 1803.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.18;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1832,132,0
CP000253.1 340867 . C T 1802.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.73;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1831,132,0
CP000253.1 340903 . C T 2382.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.08;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2411,172,0
CP000253.1 340936 . G A 2776.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.842;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8729;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.71;ReadPosRankSum=1.479;SOR=0.623 GT:AD:DP:GQ:PL 1/1:1,107:108:99:2805,205,0
CP000253.1 340948 . G A 3046.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3075,223,0
CP000253.1 340984 . T A 3340.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8507;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3369,238,0
CP000253.1 340987 . A C 3260.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.728;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2412;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.89;ReadPosRankSum=-0.371;SOR=0.630 GT:AD:DP:GQ:PL 1/1:1,130:133:99:3289,238,0
CP000253.1 340996 . G T 3503.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6434;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=1.027 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3532,256,0
CP000253.1 340999 . A G 3532.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3561,256,0
CP000253.1 341185 . A G 5654.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3441;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,232:235:99:5683,397,0
CP000253.1 341191 . T C 5659.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,238:238:99:5688,400,0
CP000253.1 341200 . C T 5861.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,240:242:99:5890,409,0
CP000253.1 341221 . T C 5725.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.446;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5053;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.66;ReadPosRankSum=-0.010;SOR=0.912 GT:AD:DP:GQ:PL 1/1:2,240:243:99:5754,384,0
CP000253.1 341293 . C T 5261.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6895;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,212:214:99:5290,373,0
CP000253.1 341338 . C A 4336.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.812;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4202;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=0.072;SOR=0.855 GT:AD:DP:GQ:PL 1/1:1,167:168:99:4365,310,0
CP000253.1 341362 . T C 937.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:72:966,72,0
CP000253.1 341365 . A G 661.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.57;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:51:690,51,0
CP000253.1 341368 . T C 667.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:51:696,51,0
CP000253.1 341371 . C A 622.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.832;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.95;ReadPosRankSum=1.594;SOR=0.626 GT:AD:DP:GQ:PL 1/1:1,23:24:48:651,48,0
CP000253.1 341374 . T G 676.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.20;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:51:705,51,0
CP000253.1 341377 . T A 666.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.78;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:51:695,51,0
CP000253.1 341383 . C T 659.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.49;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:51:688,51,0
CP000253.1 341384 . A G 651.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.34;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:24:51:680,51,0
CP000253.1 341392 . A G 668.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.87;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:51:697,51,0
CP000253.1 341393 . T G 605.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:45:634,45,0
CP000253.1 341410 . A C 733.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.18;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:54:762,54,0
CP000253.1 341413 . T C 735.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.25;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:54:764,54,0
CP000253.1 341415 . A G 697.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:51:726,51,0
CP000253.1 341419 . A G 737.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.32;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:54:766,54,0
CP000253.1 341428 . T A 854.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.57;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:63:883,63,0
CP000253.1 341446 . G A 1203.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:87:1232,87,0
CP000253.1 341572 . T C 1604.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1633,114,0
CP000253.1 341604 . G C 1569.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1598,111,0
CP000253.1 341733 . G A 3053.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3082,217,0
CP000253.1 341785 . G A 3488.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9087;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3517,244,0
CP000253.1 341827 . G A 3290.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3319,232,0
CP000253.1 341872 . T C 3073.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.812;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0374;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.20;ReadPosRankSum=-0.506;SOR=0.324 GT:AD:DP:GQ:PL 1/1:1,126:130:99:3102,220,0
CP000253.1 341874 . A G 3022.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3051,217,0
CP000253.1 341875 . T C 2950.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9607;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,124:127:99:2979,208,0
CP000253.1 341902 . A T 3283.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.769;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3678;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.15;ReadPosRankSum=1.606;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,135:136:99:3312,232,0
CP000253.1 341911 . T C 3271.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5366;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3300,232,0
CP000253.1 341924 . G A 3401.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8372;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3430,241,0
CP000253.1 341950 . A T 3030.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8684;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3059,214,0
CP000253.1 341953 . C T 3168.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3197,223,0
CP000253.1 341956 . A G 3156.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.56;ReadPosRankSum=-1.282;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,133:134:99:3185,223,0
CP000253.1 341968 . T C 3056.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3085,217,0
CP000253.1 341974 . A G 2953.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2982,211,0
CP000253.1 341979 . G A 2933.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2962,208,0
CP000253.1 341982 . G T 2884.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2913,205,0
CP000253.1 341983 . A G 2876.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2905,205,0
CP000253.1 341989 . T A 2895.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2924,205,0
CP000253.1 341995 . T A 2897.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9864;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2926,205,0
CP000253.1 341997 . A G 2856.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9864;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2885,205,0
CP000253.1 342004 . T G 2829.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2858,202,0
CP000253.1 342007 . G A 2928.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2957,208,0
CP000253.1 342015 . T C 2923.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2952,208,0
CP000253.1 342016 . C T 2902.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:116:99:2931,205,0
CP000253.1 342022 . T C 3228.29 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.914;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3754;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.27;ReadPosRankSum=0.431;SOR=0.369 GT:AD:DP:GQ:PL 1/1:1,132:133:99:3256,229,0
CP000253.1 342088 . C T 2716.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5953;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2745,193,0
CP000253.1 342280 . T G 2610.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2639,190,0
CP000253.1 342385 . C T 4107.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.50;SOR=1.065 GT:AD:DP:GQ:PL 1/1:0,155:156:99:4136,295,0
CP000253.1 342388 . A G 4097.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1457;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.96;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,152:156:99:4126,295,0
CP000253.1 342390 . T C 4095.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=1.079 GT:AD:DP:GQ:PL 1/1:0,156:157:99:4124,295,0
CP000253.1 342405 . A G 4022.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4051,289,0
CP000253.1 342406 . A T 4049.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.952;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.47;ReadPosRankSum=1.714;SOR=0.661 GT:AD:DP:GQ:PL 1/1:1,152:154:99:4078,289,0
CP000253.1 342412 . T A 4430.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4459,316,0
CP000253.1 342418 . C A 4510.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.776;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1505;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.25;ReadPosRankSum=-0.364;SOR=0.310 GT:AD:DP:GQ:PL 1/1:1,185:187:99:4539,322,0
CP000253.1 342424 . G A 4527.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,186:188:99:4556,325,0
CP000253.1 342430 . T C 4507.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.776;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5560;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.73;ReadPosRankSum=-0.374;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,189:192:99:4536,319,0
CP000253.1 342439 . G A 4552.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.7207;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,197:200:99:4581,322,0
CP000253.1 342445 . C T 4560.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.827;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8207;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.69;ReadPosRankSum=1.173;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,200:201:99:4589,322,0
CP000253.1 342503 . A G 4461.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6722;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,192:192:99:4490,316,0
CP000253.1 342518 . A G 4660.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.2510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,197:198:99:4689,331,0
CP000253.1 342566 . G A 3970.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.5616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.78;ReadPosRankSum=0.052;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,166:168:99:3999,283,0
CP000253.1 342572 . G A 3951.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.95;ReadPosRankSum=1.733;SOR=0.628 GT:AD:DP:GQ:PL 1/1:1,164:166:99:3980,280,0
CP000253.1 342757 . G A 859.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7214;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.73;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:63:888,63,0
CP000253.1 342777 . A G 892.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.90;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:33:66:921,66,0
CP000253.1 342784 . T C 861.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.93;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:63:890,63,0
CP000253.1 342786 . G A 844.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:63:873,63,0
CP000253.1 342787 . T A 856.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:63:885,63,0
CP000253.1 342791 . T C 1153.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:45:87:1182,87,0
CP000253.1 342797 . G T 2359.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.51;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2388,172,0
CP000253.1 342814 . C T 2821.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.265 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2850,205,0
CP000253.1 342821 . G T 3003.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=1.250 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3032,217,0
CP000253.1 342826 . G T 3068.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.953;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.23;ReadPosRankSum=0.966;SOR=0.993 GT:AD:DP:GQ:PL 1/1:1,116:118:99:3097,220,0
CP000253.1 342848 . G A 4429.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4458,313,0
CP000253.1 342851 . C A 4483.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7072;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4512,319,0
CP000253.1 342914 . A G 5546.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,227:228:99:5575,391,0
CP000253.1 342926 . C T 5830.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8708;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.943 GT:AD:DP:GQ:PL 1/1:0,239:240:99:5859,409,0
CP000253.1 342947 . G T 6711.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6249;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.95;ReadPosRankSum=1.246;SOR=0.570 GT:AD:DP:GQ:PL 1/1:1,248:249:99:6740,479,0
CP000253.1 342950 . G A 6593.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.911;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2256;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.48;ReadPosRankSum=1.003;SOR=0.487 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6622,470,0
CP000253.1 343001 . T C 6652.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.878;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5529;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.72;ReadPosRankSum=1.629;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6681,479,0
CP000253.1 343331 . T C 3150.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0396;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.62;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:124:99:3179,232,0
CP000253.1 343345 . G T 2450.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.997;DP=94;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1882;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;MQRankSum=0.000;QD=26.35;ReadPosRankSum=0.149;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,92:93:99:2479,175,0
CP000253.1 343380 . G A 2169.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1073;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=25.23;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2198,157,0
CP000253.1 343381 . C A 2143.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0232;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=25.22;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,85:86:99:2172,156,0
CP000253.1 343394 . G T 1765.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3936;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.23;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1794,126,0
CP000253.1 343396 . G A 1795.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2737;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=26.41;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1824,132,0
CP000253.1 343397 . T G 1673.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.744;DP=69;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2737;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=0.000;QD=24.61;ReadPosRankSum=1.555;SOR=0.288 GT:AD:DP:GQ:PL 1/1:1,67:68:99:1702,123,0
CP000253.1 343398 . A G 1634.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.557;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2955;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=0.000;QD=23.69;ReadPosRankSum=0.829;SOR=0.507 GT:AD:DP:GQ:PL 1/1:1,68:69:99:1663,123,0
CP000253.1 343400 . T C 1773.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.186;DP=71;Dels=0.00;ExcessHet=3.0103;FS=3.203;HaplotypeScore=18.3796;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=0.708;SOR=0.499 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1802,135,0
CP000253.1 343438 . A G 3282.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6989;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,135:137:99:3311,238,0
CP000253.1 343462 . C T 3373.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,136:137:99:3402,241,0
CP000253.1 343471 . A G 3365.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.665;DP=137;Dels=0.01;ExcessHet=3.0103;FS=3.242;HaplotypeScore=16.6104;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=0.363;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,134:136:99:3394,244,0
CP000253.1 343477 . T C 3291.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.055;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7538;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.13;ReadPosRankSum=0.710;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,130:132:99:3320,201,0
CP000253.1 343482 . A T 3273.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.682;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7460;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.80;ReadPosRankSum=0.637;SOR=0.242 GT:AD:DP:GQ:PL 1/1:1,131:132:99:3302,232,0
CP000253.1 343486 . G T 3400.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9524;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3429,244,0
CP000253.1 343489 . C T 3437.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0587;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3466,247,0
CP000253.1 343507 . A T 3611.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.548;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.40;ReadPosRankSum=0.647;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,147:148:99:3640,262,0
CP000253.1 343558 . A G 4808.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.760;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.53;ReadPosRankSum=-1.494;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,195:198:99:4837,343,0
CP000253.1 343591 . T G 4594.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.865;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.4927;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.93;ReadPosRankSum=1.309;SOR=0.273 GT:AD:DP:GQ:PL 1/1:1,191:192:99:4623,331,0
CP000253.1 343615 . G A 5151.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,204:206:99:5180,367,0
CP000253.1 343660 . C A 5982.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6339;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6011,433,0
CP000253.1 343677 . A T 5908.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.639;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.9407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.32;ReadPosRankSum=-0.470;SOR=0.701 GT:AD:DP:GQ:PL 1/1:2,241:246:99:5937,415,0
CP000253.1 343695 . T C 5999.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9423;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,246:249:99:6028,418,0
CP000253.1 343707 . T G 6098.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.432;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.69;ReadPosRankSum=1.585;SOR=0.129 GT:AD:DP:GQ:PL 1/1:2,245:247:99:6127,433,0
CP000253.1 343734 . A T 6203.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6607;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6232,445,0
CP000253.1 343770 . G T 6029.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.930;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1074;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.02;ReadPosRankSum=-0.561;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,240:241:99:6058,424,0
CP000253.1 343773 . T G 6014.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.96;ReadPosRankSum=0.784;SOR=0.582 GT:AD:DP:GQ:PL 1/1:1,240:241:99:6043,424,0
CP000253.1 343776 . T C 5953.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.852;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.40;ReadPosRankSum=1.726;SOR=0.320 GT:AD:DP:GQ:PL 1/1:1,243:246:99:5982,424,0
CP000253.1 343835 . A G 5684.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3379;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.50;ReadPosRankSum=0.695;SOR=0.522 GT:AD:DP:GQ:PL 1/1:1,231:232:99:5713,400,0
CP000253.1 343846 . A G 5520.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.001;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.117;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,222:225:99:5549,388,0
CP000253.1 343881 . G A 4754.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,200:201:99:4783,334,0
CP000253.1 343923 . T C 1959.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.223 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1988,141,0
CP000253.1 343924 . A G 1756.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=1.211 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1785,126,0
CP000253.1 343927 . C A 1808.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=1.211 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1837,132,0
CP000253.1 343929 . G A 1788.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=1.211 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1817,129,0
CP000253.1 343936 . G A 1891.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=1.195 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1920,135,0
CP000253.1 343944 . T C 1833.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=1.296 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1862,135,0
CP000253.1 343948 . T G 1867.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.07;SOR=1.296 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1896,135,0
CP000253.1 343953 . A G 1847.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.296 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1876,135,0
CP000253.1 343956 . G A 1882.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.29;SOR=1.296 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1911,135,0
CP000253.1 343959 . T A 1891.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.03;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1920,135,0
CP000253.1 343977 . C A 2059.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2088,147,0
CP000253.1 343982 . C A 1992.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2021,144,0
CP000253.1 343995 . A G 1837.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5868;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=1.117 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1866,132,0
CP000253.1 344063 . G A 767.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:57:796,57,0
CP000253.1 344064 . G A 778.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:57:807,57,0
CP000253.1 344079 . A G 657.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:48:686,48,0
CP000253.1 344209 . G A 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 344211 . A T 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 344212 . G T 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 344214 . A T 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 344217 . T A 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 344221 . C T 315.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:344,24,0
CP000253.1 344222 . T C 311.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:340,24,0
CP000253.1 344233 . A G 397.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:426,30,0
CP000253.1 344238 . T A 397.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:426,30,0
CP000253.1 344301 . T C 601.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:45:630,45,0
CP000253.1 344380 . A C 1842.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1871,129,0
CP000253.1 344541 . C T 2212.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4545;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2241,154,0
CP000253.1 344542 . A G 2180.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2209,151,0
CP000253.1 344563 . A G 2109.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2138,147,0
CP000253.1 344565 . C T 2199.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2228,154,0
CP000253.1 344567 . T C 2156.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2185,151,0
CP000253.1 344601 . A T 1834.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1863,129,0
CP000253.1 344614 . T C 1799.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1828,126,0
CP000253.1 344622 . G A 1621.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1650,114,0
CP000253.1 344675 . T C 878.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:63:907,63,0
CP000253.1 344872 . A C 2112.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1968;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2141,147,0
CP000253.1 344875 . C T 2125.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9632;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2154,150,0
CP000253.1 344892 . A T 2023.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.799;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.00;ReadPosRankSum=1.635;SOR=0.407 GT:AD:DP:GQ:PL 1/1:1,87:88:99:2052,144,0
CP000253.1 344943 . T A 1820.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0308;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,81:82:99:1849,129,0
CP000253.1 344949 . T G 1807.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.830;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7243;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.60;ReadPosRankSum=1.169;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,79:81:99:1836,126,0
CP000253.1 345038 . A G 2800.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9304;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2829,196,0
CP000253.1 345171 . A G 3165.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3194,220,0
CP000253.1 345269 . T C 1631.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1660,117,0
CP000253.1 345278 . A G 1616.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1645,114,0
CP000253.1 345344 . T C 1275.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:90:1304,90,0
CP000253.1 345500 . T C 3607.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.00;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,164:164:99:3636,250,0
CP000253.1 345611 . C T 4739.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,207:208:99:4768,325,0
CP000253.1 345627 . T G 4542.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.793;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.49;ReadPosRankSum=1.372;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,201:202:99:4571,313,0
CP000253.1 345628 . G T 4586.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.993;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2540;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-0.767;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,200:202:99:4615,316,0
CP000253.1 345638 . A C 4630.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.81;ReadPosRankSum=0.521;SOR=0.248 GT:AD:DP:GQ:PL 1/1:1,202:203:99:4659,322,0
CP000253.1 345648 . A T 4317.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4346,301,0
CP000253.1 345698 . T G 3318.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.545;DP=141;Dels=0.00;ExcessHet=3.0103;FS=3.041;HaplotypeScore=26.2766;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.54;ReadPosRankSum=1.390;SOR=0.268 GT:AD:DP:GQ:PL 1/1:1,140:141:99:3347,237,0
CP000253.1 345735 . C T 3311.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3340,235,0
CP000253.1 345748 . C T 3055.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3784;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3084,220,0
CP000253.1 345767 . A C 2030.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1432;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.38;ReadPosRankSum=-0.652;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,79:81:99:2059,147,0
CP000253.1 345776 . G A 1741.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9778;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1770,126,0
CP000253.1 345779 . C T 1559.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1588,111,0
CP000253.1 345791 . G A 1408.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2054;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1437,102,0
CP000253.1 345851 . A C 780.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.144;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.66;ReadPosRankSum=1.317;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,32:33:57:809,57,0
CP000253.1 345852 . T A 816.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.133;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.75;ReadPosRankSum=0.842;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,32:33:60:845,60,0
CP000253.1 345884 . T A 1057.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1086,75,0
CP000253.1 345885 . T A 1042.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1071,75,0
CP000253.1 345893 . G A 1038.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1067,75,0
CP000253.1 345901 . T C 1000.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.4407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:43:72:1029,72,0
CP000253.1 345925 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 346078 . C T 4040.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.878;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8831;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.09;ReadPosRankSum=2.287;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,174:175:99:4069,283,0
CP000253.1 346185 . A G 3488.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3517,244,0
CP000253.1 346251 . G A 2489.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2518,178,0
CP000253.1 346254 . T C 2503.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2532,178,0
CP000253.1 346260 . T G 2438.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3081;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2467,172,0
CP000253.1 346266 . T C 2436.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,102:104:99:2465,172,0
CP000253.1 346281 . A T 2245.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2274,160,0
CP000253.1 346287 . G A 858.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.67;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,28:28:66:887,66,0
CP000253.1 346290 . A C 711.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.47;SOR=1.893 GT:AD:DP:GQ:PL 1/1:0,25:25:54:740,54,0
CP000253.1 346293 . T C 697.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.07;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,24:24:54:726,54,0
CP000253.1 346299 . T G 712.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.70;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,24:24:54:741,54,0
CP000253.1 346301 . A T 707.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.49;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,24:24:54:736,54,0
CP000253.1 346310 . C T 683.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.73;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:51:712,51,0
CP000253.1 346311 . A G 674.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.34;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:51:703,51,0
CP000253.1 346317 . A T 683.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.73;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:51:712,51,0
CP000253.1 346320 . C T 676.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.42;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:51:705,51,0
CP000253.1 346322 . T C 623.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.12;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:48:652,48,0
CP000253.1 346323 . A T 672.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.25;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:51:701,51,0
CP000253.1 346326 . G A 679.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.56;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:51:708,51,0
CP000253.1 346332 . A G 836.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,31:31:63:865,63,0
CP000253.1 346342 . T G 803.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.79;SOR=1.536 GT:AD:DP:GQ:PL 1/1:0,30:31:60:832,60,0
CP000253.1 346344 . T A 854.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,31:31:63:883,63,0
CP000253.1 346353 . C T 859.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.73;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,31:31:63:888,63,0
CP000253.1 346356 . C T 796.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,31:31:60:825,60,0
CP000253.1 346556 . T A 482.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:36:511,36,0
CP000253.1 346557 . T C 484.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:36:513,36,0
CP000253.1 346572 . A G 401.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:430,30,0
CP000253.1 347661 . G T 436.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:18:33:465,33,0
CP000253.1 348114 . G A 3204.83 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3236,226,0
CP000253.1 348225 . A G 2904.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2933,205,0
CP000253.1 348255 . T C 2750.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8856;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2779,199,0
CP000253.1 348417 . A T 4069.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.117;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.13;ReadPosRankSum=1.190;SOR=1.315 GT:AD:DP:GQ:PL 1/1:3,147:151:99:4098,298,0
CP000253.1 348502 . G T 4968.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.744;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.60;ReadPosRankSum=-1.656;SOR=0.602 GT:AD:DP:GQ:PL 1/1:1,201:202:99:4997,355,0
CP000253.1 348558 . A C 5504.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.875;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.69;ReadPosRankSum=1.430;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,222:224:99:5533,388,0
CP000253.1 348585 . T G 5434.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.729;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8008;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.05;ReadPosRankSum=1.668;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,216:218:99:5463,388,0
CP000253.1 348714 . T C 4797.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.843;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4536;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.80;ReadPosRankSum=0.571;SOR=1.043 GT:AD:DP:GQ:PL 1/1:1,178:186:99:4826,349,0
CP000253.1 348836 . C T 4160.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=1.077 GT:AD:DP:GQ:PL 1/1:0,163:164:99:4189,298,0
CP000253.1 348912 . T C 3469.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6923;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=1.043 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3498,250,0
CP000253.1 348939 . A T 3053.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1768;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3082,220,0
CP000253.1 349370 . A G 3481.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.657;DP=150;Dels=0.00;ExcessHet=3.0103;FS=3.368;HaplotypeScore=15.5521;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.21;ReadPosRankSum=-2.290;SOR=0.445 GT:AD:DP:GQ:PL 1/1:3,147:150:99:3510,227,0
CP000253.1 349658 . A G 4848.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,196:196:99:4877,346,0
CP000253.1 349673 . A G 4742.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.740;DP=195;Dels=0.00;ExcessHet=3.0103;FS=3.218;HaplotypeScore=17.7378;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=-0.135;SOR=0.392 GT:AD:DP:GQ:PL 1/1:1,192:195:99:4771,315,0
CP000253.1 349769 . G A 4503.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.942;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5483;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.08;ReadPosRankSum=1.696;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,186:189:99:4532,316,0
CP000253.1 349802 . C T 4221.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2278;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4250,298,0
CP000253.1 349961 . C T 2826.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7153;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2855,202,0
CP000253.1 350003 . T C 2550.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.925;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5069;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.26;ReadPosRankSum=-0.635;SOR=0.829 GT:AD:DP:GQ:PL 1/1:1,100:102:99:2579,187,0
CP000253.1 350129 . A G 1240.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0427;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1269,90,0
CP000253.1 350642 . A G 5132.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.674;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.54;ReadPosRankSum=1.388;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,200:201:99:5161,373,0
CP000253.1 351080 . A C 3529.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4109;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=25.21;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3558,253,0
CP000253.1 351218 . T C 5455.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2635;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,220:221:99:5484,385,0
CP000253.1 351242 . A G 5500.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4193;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,223:224:99:5529,394,0
CP000253.1 351269 . G A 5949.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.858 GT:AD:DP:GQ:PL 1/1:0,234:234:99:5978,421,0
CP000253.1 351338 . A T 6182.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.851;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3976;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;MQRankSum=0.000;QD=24.73;ReadPosRankSum=-0.970;SOR=0.366 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6211,436,0
CP000253.1 351391 . T A 6452.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.568;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.12;ReadPosRankSum=-1.494;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,246:247:99:6481,466,0
CP000253.1 352566 . A C 5058.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,194:195:99:5087,361,0
CP000253.1 353377 . G A 3233.06 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.497;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.49;ReadPosRankSum=0.177;SOR=0.822 GT:AD:DP:GQ:PL 1/1:2,130:133:99:3263,193,0
CP000253.1 353935 . T A 5873.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6247;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,226:226:99:5902,415,0
CP000253.1 354161 . G A 4227.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.6183;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,168:169:99:4256,307,0
CP000253.1 354350 . A C 4229.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7781;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.48;ReadPosRankSum=-1.326;SOR=0.646 GT:AD:DP:GQ:PL 1/1:1,165:167:99:4258,310,0
CP000253.1 354386 . A T 4589.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.969 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4618,325,0
CP000253.1 354419 . C T 4524.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.784;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.71;ReadPosRankSum=1.034;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,175:176:99:4553,325,0
CP000253.1 354467 . G T 4811.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.899;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6789;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=1.493;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,187:189:99:4840,346,0
CP000253.1 354491 . T A 5012.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2080;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=25.19;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,199:199:99:5041,355,0
CP000253.1 354584 . A G 5864.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.0002;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=25.61;SOR=0.999 GT:AD:DP:GQ:PL 1/1:0,229:229:99:5893,427,0
CP000253.1 354752 . T G 5923.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,241:242:99:5952,424,0
CP000253.1 355324 . G A 3260.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7801;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,131:132:99:3289,232,0
CP000253.1 355633 . G A 3853.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6198;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,162:162:99:3882,268,0
CP000253.1 355648 . G A 3900.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,160:160:99:3929,274,0
CP000253.1 355683 . G A 3829.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3858,268,0
CP000253.1 355762 . T C 2968.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2997,211,0
CP000253.1 356104 . A T 3376.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.910;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.29;ReadPosRankSum=-1.423;SOR=0.312 GT:AD:DP:GQ:PL 1/1:1,144:146:99:3405,235,0
CP000253.1 356131 . C T 3652.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7642;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,160:161:99:3681,253,0
CP000253.1 356185 . G A 3723.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,166:167:99:3752,256,0
CP000253.1 356669 . G A 447.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:476,33,0
CP000253.1 357303 . A G 3132.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5824;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=-0.358;SOR=0.564 GT:AD:DP:GQ:PL 1/1:1,125:127:99:3161,223,0
CP000253.1 357489 . C T 1779.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=1.073 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1808,126,0
CP000253.1 357585 . G A 1140.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9123;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1169,81,0
CP000253.1 357681 . A T 419.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:33:448,33,0
CP000253.1 357684 . T C 427.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.74;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:33:456,33,0
CP000253.1 357882 . T A 342.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.12;MQ0=0;QD=26.37;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:27:371,27,0
CP000253.1 357885 . C T 340.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.12;MQ0=0;QD=26.21;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:27:369,27,0
CP000253.1 357889 . A G 315.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.18;MQ0=0;QD=22.56;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:24:344,24,0
CP000253.1 357897 . C T 339.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.18;MQ0=0;QD=24.27;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:27:368,27,0
CP000253.1 357902 . A G 357.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.18;MQ0=0;QD=25.56;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:27:386,27,0
CP000253.1 357915 . T G 310.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:24:339,24,0
CP000253.1 357921 . T C 267.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:21:296,21,0
CP000253.1 357924 . G A 218.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:18:247,18,0
CP000253.1 357933 . A T 256.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:285,21,0
CP000253.1 357939 . A T 257.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:286,21,0
CP000253.1 357954 . C T 386.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.63;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:30:415,30,0
CP000253.1 358141 . G T 1090.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.71;ReadPosRankSum=-0.378;SOR=0.292 GT:AD:DP:GQ:PL 1/1:1,45:46:78:1119,78,0
CP000253.1 358185 . G T 1254.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.517;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.24;ReadPosRankSum=0.092;SOR=0.105 GT:AD:DP:GQ:PL 1/1:2,52:54:90:1283,90,0
CP000253.1 358188 . A T 1280.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:54:90:1309,90,0
CP000253.1 358194 . C A 1327.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1356,93,0
CP000253.1 358212 . C T 1500.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1529,105,0
CP000253.1 358233 . T G 1642.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1671,114,0
CP000253.1 358236 . A G 1662.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1691,117,0
CP000253.1 358239 . T C 1673.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1702,117,0
CP000253.1 358242 . A T 1717.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1746,120,0
CP000253.1 358254 . A T 2052.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2081,144,0
CP000253.1 358260 . A T 2115.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2144,147,0
CP000253.1 358266 . C T 2083.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8938;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2112,147,0
CP000253.1 358269 . T C 2104.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2133,147,0
CP000253.1 358317 . T C 2050.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2079,141,0
CP000253.1 358365 . T C 2050.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5981;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2079,144,0
CP000253.1 358377 . A T 1719.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1748,120,0
CP000253.1 358380 . C T 1656.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.09;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1685,114,0
CP000253.1 358389 . T A 1371.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:96:1400,96,0
CP000253.1 358392 . A T 1370.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:96:1399,96,0
CP000253.1 358399 . T C 1333.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1362,93,0
CP000253.1 358401 . A T 1279.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5981;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:90:1308,90,0
CP000253.1 358407 . T C 1241.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:55:87:1270,87,0
CP000253.1 358410 . A G 1228.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1257,87,0
CP000253.1 358422 . T C 1341.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:96:1370,96,0
CP000253.1 358440 . C T 1039.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1068,75,0
CP000253.1 358452 . A G 904.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:66:933,66,0
CP000253.1 358458 . T A 788.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:57:817,57,0
CP000253.1 358464 . T A 755.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:57:784,57,0
CP000253.1 358467 . C T 697.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:726,51,0
CP000253.1 358482 . G A 753.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:782,54,0
CP000253.1 358488 . C A 621.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:45:650,45,0
CP000253.1 358491 . A T 618.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:45:647,45,0
CP000253.1 358497 . C T 494.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:523,36,0
CP000253.1 358512 . T G 325.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.16;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:24:354,24,0
CP000253.1 358515 . A G 346.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:375,27,0
CP000253.1 358519 . C T 329.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:24:358,24,0
CP000253.1 358528 . C T 361.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.28;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:390,27,0
CP000253.1 358536 . T A 585.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:614,42,0
CP000253.1 358540 . T C 616.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:645,45,0
CP000253.1 358542 . A G 654.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:683,48,0
CP000253.1 358557 . C T 981.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:69:1010,69,0
CP000253.1 358566 . T A 1153.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.995;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.37;ReadPosRankSum=1.870;SOR=0.853 GT:AD:DP:GQ:PL 1/1:2,52:54:43:1182,43,0
CP000253.1 358575 . G T 1330.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.924;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.18;ReadPosRankSum=1.346;SOR=0.836 GT:AD:DP:GQ:PL 1/1:2,58:60:55:1359,55,0
CP000253.1 358581 . T G 1472.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.850;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.66;ReadPosRankSum=0.857;SOR=0.818 GT:AD:DP:GQ:PL 1/1:2,66:68:64:1501,64,0
CP000253.1 358596 . T C 1621.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.537;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.22;ReadPosRankSum=0.458;SOR=0.904 GT:AD:DP:GQ:PL 1/1:2,71:74:76:1650,76,0
CP000253.1 358597 . A T 1640.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.802;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.17;ReadPosRankSum=0.485;SOR=0.869 GT:AD:DP:GQ:PL 1/1:2,72:74:76:1669,76,0
CP000253.1 358608 . A T 1663.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.633;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.06;ReadPosRankSum=-0.836;SOR=0.473 GT:AD:DP:GQ:PL 1/1:3,76:79:53:1692,53,0
CP000253.1 358620 . G A 1667.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.146;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.38;ReadPosRankSum=0.739;SOR=0.864 GT:AD:DP:GQ:PL 1/1:4,74:78:40:1696,40,0
CP000253.1 358623 . A G 1723.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.345;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.10;ReadPosRankSum=0.206;SOR=0.859 GT:AD:DP:GQ:PL 1/1:2,76:78:82:1752,82,0
CP000253.1 358624 . A G 1689.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.884;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.66;ReadPosRankSum=0.206;SOR=0.859 GT:AD:DP:GQ:PL 1/1:2,76:78:79:1718,79,0
CP000253.1 358626 . A T 1750.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.269;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.45;ReadPosRankSum=0.206;SOR=0.859 GT:AD:DP:GQ:PL 1/1:2,76:78:85:1779,85,0
CP000253.1 358629 . T A 1769.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.718;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.69;ReadPosRankSum=0.206;SOR=0.859 GT:AD:DP:GQ:PL 1/1:2,76:78:85:1798,85,0
CP000253.1 358641 . T A 1981.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.904;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8928;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.04;ReadPosRankSum=-0.445;SOR=0.897 GT:AD:DP:GQ:PL 1/1:2,84:86:99:2010,100,0
CP000253.1 358653 . A T 1902.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.214;DP=83;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.49;ReadPosRankSum=-0.503;SOR=0.824 GT:AD:DP:GQ:PL 1/1:2,79:81:97:1931,97,0
CP000253.1 358656 . T C 1953.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.623;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.54;ReadPosRankSum=-0.729;SOR=0.821 GT:AD:DP:GQ:PL 1/1:2,81:83:99:1982,100,0
CP000253.1 358657 . G T 1914.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.873;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.07;ReadPosRankSum=-0.729;SOR=0.821 GT:AD:DP:GQ:PL 1/1:2,81:83:97:1943,97,0
CP000253.1 358662 . A T 1963.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.672;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5611;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.95;ReadPosRankSum=-0.707;SOR=0.850 GT:AD:DP:GQ:PL 1/1:2,80:83:99:1992,100,0
CP000253.1 358665 . T G 1962.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.928;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.65;ReadPosRankSum=-1.146;SOR=0.821 GT:AD:DP:GQ:PL 1/1:2,81:83:99:1991,100,0
CP000253.1 358668 . A T 1975.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.615;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.80;ReadPosRankSum=-1.264;SOR=0.821 GT:AD:DP:GQ:PL 1/1:2,81:83:99:2004,100,0
CP000253.1 358677 . C T 2100.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.631;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.83;ReadPosRankSum=-1.434;SOR=0.738 GT:AD:DP:GQ:PL 1/1:2,90:92:99:2129,109,0
CP000253.1 358713 . T C 1962.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.712;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.56;ReadPosRankSum=-0.695;SOR=0.716 GT:AD:DP:GQ:PL 1/1:2,85:87:99:1991,100,0
CP000253.1 358716 . A G 1999.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.822;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.99;ReadPosRankSum=-0.695;SOR=0.716 GT:AD:DP:GQ:PL 1/1:2,85:87:99:2028,103,0
CP000253.1 358722 . T A 2011.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.673;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.12;ReadPosRankSum=-0.695;SOR=0.716 GT:AD:DP:GQ:PL 1/1:2,85:87:99:2040,103,0
CP000253.1 358731 . T A 1959.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.720;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.06;ReadPosRankSum=-0.189;SOR=0.717 GT:AD:DP:GQ:PL 1/1:2,83:85:99:1988,100,0
CP000253.1 358737 . T A 1818.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.723;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.02;ReadPosRankSum=0.822;SOR=0.440 GT:AD:DP:GQ:PL 1/1:3,76:79:91:1847,91,0
CP000253.1 358738 . G C 1792.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.928;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.69;ReadPosRankSum=0.047;SOR=0.719 GT:AD:DP:GQ:PL 1/1:2,77:79:88:1821,88,0
CP000253.1 358742 . A T 1841.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.850;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.31;ReadPosRankSum=0.109;SOR=0.719 GT:AD:DP:GQ:PL 1/1:2,77:79:91:1870,91,0
CP000253.1 358859 . A C 1238.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1267,90,0
CP000253.1 358862 . C T 1250.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:90:1279,90,0
CP000253.1 358871 . G A 1231.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1260,87,0
CP000253.1 358889 . A T 1381.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2322;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1410,99,0
CP000253.1 358895 . A T 1453.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:57:99:1482,105,0
CP000253.1 358904 . A G 1588.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1617,114,0
CP000253.1 358920 . A C 1575.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4501;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1604,114,0
CP000253.1 358925 . T C 1627.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4781;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1656,117,0
CP000253.1 358961 . T A 1659.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8600;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=24.77;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1688,117,0
CP000253.1 358975 . A T 1647.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=23.88;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1676,117,0
CP000253.1 358982 . T G 1655.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=23.65;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1684,117,0
CP000253.1 359011 . A C 1856.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.780;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=24.11;ReadPosRankSum=0.338;SOR=0.391 GT:AD:DP:GQ:PL 1/1:1,76:77:99:1885,132,0
CP000253.1 359038 . A C 2006.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5462;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=24.47;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2035,141,0
CP000253.1 359041 . G A 1985.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5462;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=24.52;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:82:99:2014,141,0
CP000253.1 359077 . A T 2015.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.20;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2044,144,0
CP000253.1 359083 . A G 2016.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.19;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2045,144,0
CP000253.1 359086 . A G 1981.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.74;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2010,144,0
CP000253.1 359092 . T C 2000.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.33;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2029,144,0
CP000253.1 359095 . A G 1913.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.86;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:76:99:1942,138,0
CP000253.1 359101 . G A 2016.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.54;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2045,144,0
CP000253.1 359110 . A G 1964.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.20;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1993,141,0
CP000253.1 359116 . T A 1797.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.24;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1826,129,0
CP000253.1 359119 . G T 1710.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7602;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1739,123,0
CP000253.1 359122 . T A 1798.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7602;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.25;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1827,129,0
CP000253.1 359125 . T C 1734.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7876;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:66:99:1763,126,0
CP000253.1 359128 . T A 1784.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1813,129,0
CP000253.1 359134 . A G 1739.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1768,126,0
CP000253.1 359137 . G T 1756.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1785,126,0
CP000253.1 359140 . A T 1905.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.62;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1934,138,0
CP000253.1 359158 . T A 2363.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2392,169,0
CP000253.1 359162 . T C 2407.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2436,172,0
CP000253.1 359197 . G A 2556.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7290;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2585,184,0
CP000253.1 359203 . G A 2558.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4145;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2587,181,0
CP000253.1 359206 . G T 2578.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5478;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2607,184,0
CP000253.1 359230 . C T 2858.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,113:115:99:2887,205,0
CP000253.1 359233 . T C 2819.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7470;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,113:115:99:2848,202,0
CP000253.1 359236 . T A 2853.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3235;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2882,205,0
CP000253.1 359242 . G T 3204.83 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.941;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=0.531;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,127:128:99:3236,229,0
CP000253.1 359254 . A T 2861.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.946;DP=127;Dels=0.00;ExcessHet=3.0103;FS=1.551;HaplotypeScore=13.3515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.53;ReadPosRankSum=4.161;SOR=0.800 GT:AD:DP:GQ:PL 1/1:7,120:127:61:2890,61,0
CP000253.1 359257 . G A 2734.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.744;DP=127;Dels=0.00;ExcessHet=3.0103;FS=3.839;HaplotypeScore=11.3335;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.88;ReadPosRankSum=4.145;SOR=0.696 GT:AD:DP:GQ:PL 1/1:6,119:127:55:2763,55,0
CP000253.1 359260 . A T 3058.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.781;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.08;ReadPosRankSum=-0.096;SOR=0.311 GT:AD:DP:GQ:PL 1/1:1,126:127:99:3087,220,0
CP000253.1 359266 . G T 3135.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.605;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.94;ReadPosRankSum=1.346;SOR=0.840 GT:AD:DP:GQ:PL 1/1:2,129:132:99:3164,223,0
CP000253.1 359308 . G A 3858.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7122;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3887,274,0
CP000253.1 359320 . C T 3946.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1241;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3975,280,0
CP000253.1 359329 . A T 4041.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8490;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.964 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4070,289,0
CP000253.1 359335 . T C 4238.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8463;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.23;ReadPosRankSum=-0.134;SOR=0.599 GT:AD:DP:GQ:PL 1/1:1,167:169:99:4267,298,0
CP000253.1 359344 . C T 4687.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4716,334,0
CP000253.1 359350 . T A 4829.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0607;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=1.033 GT:AD:DP:GQ:PL 1/1:0,188:190:99:4858,340,0
CP000253.1 359356 . T A 4824.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4853,343,0
CP000253.1 359368 . A T 4805.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4834,340,0
CP000253.1 359371 . C T 4682.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2576;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.046 GT:AD:DP:GQ:PL 1/1:0,182:183:99:4711,337,0
CP000253.1 359374 . T A 4756.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3361;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,188:188:99:4785,337,0
CP000253.1 359383 . T C 4886.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,195:195:99:4915,346,0
CP000253.1 359386 . T C 4756.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.920;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.65;ReadPosRankSum=-0.628;SOR=0.321 GT:AD:DP:GQ:PL 1/1:1,192:193:99:4785,337,0
CP000253.1 359395 . T C 5327.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.919;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8611;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.37;ReadPosRankSum=1.279;SOR=0.587 GT:AD:DP:GQ:PL 1/1:1,209:210:99:5356,376,0
CP000253.1 359413 . A T 5744.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,227:227:99:5773,406,0
CP000253.1 359416 . G A 5712.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2460;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,224:226:99:5741,403,0
CP000253.1 359428 . T A 5698.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,228:228:99:5727,397,0
CP000253.1 359434 . G A 5698.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8668;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,231:232:99:5727,403,0
CP000253.1 359440 . T C 5552.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.999;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7098;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.46;ReadPosRankSum=-1.625;SOR=0.626 GT:AD:DP:GQ:PL 1/1:3,224:227:99:5581,394,0
CP000253.1 359443 . G A 5693.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,225:225:99:5722,400,0
CP000253.1 359461 . A G 5567.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,229:231:99:5596,394,0
CP000253.1 359497 . A G 5701.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,235:236:99:5730,403,0
CP000253.1 359572 . T C 4897.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1066;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,212:213:99:4926,343,0
CP000253.1 359992 . C T 1277.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:90:1306,90,0
CP000253.1 360010 . T C 1150.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3236;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:52:81:1179,81,0
CP000253.1 360210 . A G 625.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.547;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.56;ReadPosRankSum=0.597;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,31:32:45:654,45,0
CP000253.1 360224 . T A 782.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:57:811,57,0
CP000253.1 360324 . A G 860.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:63:889,63,0
CP000253.1 360405 . T C 674.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.49;ReadPosRankSum=-1.282;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,29:30:48:703,48,0
CP000253.1 360418 . A G 227.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:256,18,0
CP000253.1 360419 . T C 230.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:259,18,0
CP000253.1 360461 . G A 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 360478 . A G 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 361748 . A T 548.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:42:577,42,0
CP000253.1 361753 . T A 484.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:513,36,0
CP000253.1 361758 . G A 451.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.3899;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:480,33,0
CP000253.1 361783 . C T 380.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:409,30,0
CP000253.1 361788 . C T 344.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.73;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:13:27:373,27,0
CP000253.1 361794 . G A 342.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.56;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:13:27:371,27,0
CP000253.1 361804 . G A 349.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:378,27,0
CP000253.1 362274 . T A 489.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:518,36,0
CP000253.1 362275 . A G 458.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.95;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:33:487,33,0
CP000253.1 362689 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 362922 . T C 276.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.45;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:21:305,21,0
CP000253.1 362968 . G A 741.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:34:54:770,54,0
CP000253.1 363169 . T C 1625.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1654,117,0
CP000253.1 363191 . A C 1075.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1104,78,0
CP000253.1 363197 . G T 1050.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1079,75,0
CP000253.1 363215 . G T 1683.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1712,120,0
CP000253.1 363242 . T C 1684.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1713,120,0
CP000253.1 363248 . A C 1564.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1593,111,0
CP000253.1 363249 . C T 1644.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1673,117,0
CP000253.1 363251 . T C 1610.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1639,114,0
CP000253.1 363268 . T C 1541.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.789;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.36;ReadPosRankSum=-1.485;SOR=0.369 GT:AD:DP:GQ:PL 1/1:1,65:68:99:1570,111,0
CP000253.1 363271 . C A 1524.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1553,108,0
CP000253.1 363275 . C T 1572.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1601,111,0
CP000253.1 363291 . C A 1692.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1721,117,0
CP000253.1 363323 . T A 1718.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.929;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.23;ReadPosRankSum=-0.423;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,73:74:99:1747,120,0
CP000253.1 363327 . G A 1738.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1767,123,0
CP000253.1 363335 . C G 1615.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1644,114,0
CP000253.1 363339 . G A 1613.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1642,114,0
CP000253.1 363341 . G A 1601.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1630,114,0
CP000253.1 363345 . T C 1727.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1756,123,0
CP000253.1 363353 . A G 1550.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1579,111,0
CP000253.1 363360 . C G 1527.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1556,111,0
CP000253.1 363363 . T C 1529.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.229;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.18;ReadPosRankSum=2.420;SOR=0.756 GT:AD:DP:GQ:PL 1/1:2,64:66:77:1558,77,0
CP000253.1 363364 . C T 1532.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.477;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.22;ReadPosRankSum=2.421;SOR=0.756 GT:AD:DP:GQ:PL 1/1:2,64:66:77:1561,77,0
CP000253.1 363374 . C T 1959.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9039;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:84:99:1988,138,0
CP000253.1 363384 . A G 1904.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:83:99:1933,135,0
CP000253.1 363396 . T A 1947.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8619;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,85:85:99:1976,135,0
CP000253.1 363631 . T C 392.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.06;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:30:421,30,0
CP000253.1 364219 . G A 317.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:346,24,0
CP000253.1 364220 . C T 313.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:342,24,0
CP000253.1 364226 . G A 312.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:341,24,0
CP000253.1 364241 . G A 143.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:171,12,0
CP000253.1 364277 . A G 316.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:345,24,0
CP000253.1 364313 . C T 402.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:431,30,0
CP000253.1 364322 . G A 454.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:483,33,0
CP000253.1 364376 . T C 362.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.34;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:391,27,0
CP000253.1 364513 . C T 230.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:259,18,0
CP000253.1 364515 . A G 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 364528 . T C 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 364539 . C T 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 364600 . C T 144.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:172,12,0
CP000253.1 364647 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 364718 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 364773 . A G 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 364839 . T G 451.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:480,33,0
CP000253.1 364840 . A G 451.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:480,33,0
CP000253.1 364908 . T C 620.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:25:45:649,45,0
CP000253.1 364963 . C T 1107.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.953;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.57;ReadPosRankSum=1.698;SOR=0.643 GT:AD:DP:GQ:PL 1/1:1,46:48:78:1136,78,0
CP000253.1 365000 . A G 2013.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.434;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4573;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.42;ReadPosRankSum=2.429;SOR=0.737 GT:AD:DP:GQ:PL 1/1:2,92:94:99:2042,100,0
CP000253.1 365002 . G A 2094.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2123,144,0
CP000253.1 365067 . G C 2442.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2471,169,0
CP000253.1 365076 . T C 2497.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.50;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2526,172,0
CP000253.1 365181 . C T 2395.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2424,166,0
CP000253.1 365617 . T A 2280.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2309,160,0
CP000253.1 365685 . C T 1599.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1628,111,0
CP000253.1 365774 . A G 944.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:69:973,69,0
CP000253.1 366071 . A C 692.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=55.1242;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:721,51,0
CP000253.1 366075 . T A 696.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:725,51,0
CP000253.1 366076 . A G 701.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:730,51,0
CP000253.1 366080 . A T 710.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:739,51,0
CP000253.1 366085 . A T 657.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:686,48,0
CP000253.1 366088 . T C 632.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.942;DP=29;Dels=0.00;ExcessHet=3.0103;FS=3.163;HaplotypeScore=5.7495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.82;ReadPosRankSum=-0.180;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,28:29:25:661,25,0
CP000253.1 366089 . T G 661.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-0.180;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,28:29:48:690,48,0
CP000253.1 366126 . T A 1762.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1791,123,0
CP000253.1 366265 . G A 1547.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.003;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.10;ReadPosRankSum=1.733;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,66:67:99:1576,108,0
CP000253.1 366528 . A G 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 366529 . T C 89.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:117,9,0
CP000253.1 366531 . G A 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 367063 . T A 306.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.89;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:335,24,0
CP000253.1 367902 . C A 5024.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6267;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,207:208:99:5053,355,0
CP000253.1 367975 . A G 2949.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,118:119:99:2978,211,0
CP000253.1 367989 . C T 2548.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4491;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2577,181,0
CP000253.1 368008 . T G 2450.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5164;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2479,175,0
CP000253.1 368009 . T G 2530.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5164;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2559,181,0
CP000253.1 368024 . G T 2593.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2622,184,0
CP000253.1 368038 . T A 2443.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2472,172,0
CP000253.1 368059 . G A 2285.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3403;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2314,163,0
CP000253.1 368076 . T C 1767.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1796,126,0
CP000253.1 368081 . G A 1765.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1794,126,0
CP000253.1 368268 . T A 948.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:69:977,69,0
CP000253.1 368409 . T C 912.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:66:941,66,0
CP000253.1 368442 . G A 1097.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1126,78,0
CP000253.1 368454 . T G 1485.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1514,105,0
CP000253.1 368482 . A G 1544.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1573,111,0
CP000253.1 368520 . G A 1434.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.861;DP=64;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2224;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.77;ReadPosRankSum=-0.373;SOR=0.725 GT:AD:DP:GQ:PL 1/1:2,61:63:64:1463,64,0
CP000253.1 368551 . C A 749.81 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.866;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.19;ReadPosRankSum=-1.626;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,30:31:20:778,20,0
CP000253.1 368558 . T A 746.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.579;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.09;ReadPosRankSum=-1.531;SOR=0.760 GT:AD:DP:GQ:PL 1/1:2,29:31:55:775,55,0
CP000253.1 368560 . A G 748.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.052;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.15;ReadPosRankSum=-0.560;SOR=0.428 GT:AD:DP:GQ:PL 1/1:1,30:31:56:777,56,0
CP000253.1 368561 . C T 774.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.086;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7876;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.99;ReadPosRankSum=-1.531;SOR=0.760 GT:AD:DP:GQ:PL 1/1:2,29:31:57:803,57,0
CP000253.1 368562 . T A 807.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:60:836,60,0
CP000253.1 368565 . A G 812.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:60:841,60,0
CP000253.1 368567 . C T 828.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.73;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:60:857,60,0
CP000253.1 368615 . A G 1703.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1732,120,0
CP000253.1 368638 . T G 1579.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1608,111,0
CP000253.1 368766 . A T 1407.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1436,99,0
CP000253.1 369192 . A G 488.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:517,36,0
CP000253.1 369245 . T C 626.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:655,45,0
CP000253.1 369246 . C A 613.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:642,45,0
CP000253.1 369399 . T C 1094.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:78:1123,78,0
CP000253.1 369441 . A G 980.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1009,69,0
CP000253.1 369444 . A G 986.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1015,69,0
CP000253.1 369450 . G A 979.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1008,69,0
CP000253.1 369453 . G A 925.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:41:66:954,66,0
CP000253.1 369454 . T A 940.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:66:969,66,0
CP000253.1 369468 . T A 980.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:69:1009,69,0
CP000253.1 369500 . C T 1103.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1132,78,0
CP000253.1 369501 . T C 1098.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1127,78,0
CP000253.1 369510 . C T 1156.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1185,81,0
CP000253.1 369537 . A G 1064.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:75:1093,75,0
CP000253.1 369558 . T C 1132.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.900;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.66;ReadPosRankSum=1.597;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,49:50:81:1161,81,0
CP000253.1 369846 . A T 4095.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4124,286,0
CP000253.1 369849 . A G 4023.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6135;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,164:165:99:4052,283,0
CP000253.1 369852 . C A 4067.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4096,283,0
CP000253.1 369873 . C A 4572.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.58;ReadPosRankSum=1.314;SOR=0.636 GT:AD:DP:GQ:PL 1/1:1,185:187:99:4601,322,0
CP000253.1 369909 . G T 5085.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.601;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3812;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.10;ReadPosRankSum=1.793;SOR=0.913 GT:AD:DP:GQ:PL 1/1:2,209:211:99:5114,358,0
CP000253.1 369988 . T C 4933.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,207:209:99:4962,349,0
CP000253.1 370224 . A G 4961.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6528;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.84;ReadPosRankSum=1.426;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,191:193:99:4990,355,0
CP000253.1 370734 . A G 3864.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9792;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3893,280,0
CP000253.1 370917 . T G 4815.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4844,346,0
CP000253.1 370935 . G A 4894.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6902;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4923,352,0
CP000253.1 371019 . A T 4976.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.538;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1493;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.26;ReadPosRankSum=-0.300;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,213:214:99:5005,327,0
CP000253.1 371055 . A G 4662.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.6740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,195:198:99:4691,331,0
CP000253.1 371088 . T C 4454.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,181:183:99:4483,319,0
CP000253.1 371100 . A T 4219.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4248,301,0
CP000253.1 371103 . T A 4255.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6849;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4284,301,0
CP000253.1 371123 . T A 3917.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=1.091 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3946,286,0
CP000253.1 371133 . C T 3632.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.52;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3661,265,0
CP000253.1 371136 . C T 3634.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.75;SOR=1.232 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3663,262,0
CP000253.1 371139 . A T 3371.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.910;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.35;ReadPosRankSum=0.195;SOR=0.437 GT:AD:DP:GQ:PL 1/1:1,132:134:99:3400,212,0
CP000253.1 371145 . A G 3744.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5695;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.74;SOR=1.213 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3773,271,0
CP000253.1 371151 . T C 3700.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6839;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.82;ReadPosRankSum=0.640;SOR=0.417 GT:AD:DP:GQ:PL 1/1:1,137:138:99:3729,274,0
CP000253.1 371154 . G A 3689.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.900;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5505;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.74;ReadPosRankSum=1.155;SOR=0.417 GT:AD:DP:GQ:PL 1/1:1,137:138:99:3718,268,0
CP000253.1 371160 . A T 3970.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.554;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3190;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.83;ReadPosRankSum=-1.454;SOR=0.204 GT:AD:DP:GQ:PL 1/1:2,146:148:99:3999,271,0
CP000253.1 371216 . G A 3694.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.245;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6957;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.97;ReadPosRankSum=0.544;SOR=0.352 GT:AD:DP:GQ:PL 1/1:1,136:139:99:3723,245,0
CP000253.1 371890 . C T 216.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.98;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:18:245,18,0
CP000253.1 371976 . T C 133.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0
CP000253.1 372142 . A G 596.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,22:22:45:625,45,0
CP000253.1 372173 . A G 588.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.04;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:45:617,45,0
CP000253.1 372176 . G T 597.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.47;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:45:626,45,0
CP000253.1 372191 . T A 676.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:51:705,51,0
CP000253.1 372196 . A C 687.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:51:716,51,0
CP000253.1 372202 . T C 692.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:27:51:721,51,0
CP000253.1 372216 . A T 651.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:680,48,0
CP000253.1 372296 . A T 898.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.24;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:33:66:927,66,0
CP000253.1 372303 . T C 896.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,35:35:66:925,66,0
CP000253.1 372337 . A T 1176.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:46:84:1205,84,0
CP000253.1 372338 . C T 1126.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:44:81:1155,81,0
CP000253.1 372460 . G A 2277.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3529;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2306,163,0
CP000253.1 372682 . C T 3513.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4384;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3542,247,0
CP000253.1 372760 . C A 3610.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,145:146:99:3639,262,0
CP000253.1 372835 . C T 3501.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3530,250,0
CP000253.1 373198 . A T 3801.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2165;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=1.001 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3830,277,0
CP000253.1 373213 . A G 3633.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.800;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8394;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.52;ReadPosRankSum=1.050;SOR=0.561 GT:AD:DP:GQ:PL 1/1:1,136:138:99:3662,262,0
CP000253.1 373225 . A T 3805.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2688;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.38;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3834,277,0
CP000253.1 374137 . G A 4595.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3074;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4624,334,0
CP000253.1 374191 . C T 4563.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4592,328,0
CP000253.1 374284 . T G 5256.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.655;DP=217;Dels=0.00;ExcessHet=3.0103;FS=3.542;HaplotypeScore=13.5187;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=1.261;SOR=0.623 GT:AD:DP:GQ:PL 1/1:1,216:217:99:5285,370,0
CP000253.1 374311 . A C 5335.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.681;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.48;ReadPosRankSum=-0.912;SOR=0.177 GT:AD:DP:GQ:PL 1/1:2,216:218:99:5364,373,0
CP000253.1 374395 . G T 4305.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=1.060 GT:AD:DP:GQ:PL 1/1:0,176:177:99:4334,301,0
CP000253.1 374401 . A G 4038.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=1.004 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4067,283,0
CP000253.1 374403 . T C 3996.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,164:165:99:4025,277,0
CP000253.1 374410 . C T 3891.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3345;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,160:160:99:3920,271,0
CP000253.1 374419 . A G 3191.82 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2183;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=1.027 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3220,226,0
CP000253.1 374422 . G A 3076.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2183;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=1.082 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3105,217,0
CP000253.1 374428 . T A 2912.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2941,205,0
CP000253.1 374431 . A G 2887.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=1.059 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2916,205,0
CP000253.1 374434 . A G 2949.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,118:119:99:2978,208,0
CP000253.1 374437 . C A 2965.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3877;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=1.059 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2994,211,0
CP000253.1 374567 . T C 742.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:54:771,54,0
CP000253.1 374610 . T C 712.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0483;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:741,51,0
CP000253.1 374685 . G A 978.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.054;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.24;ReadPosRankSum=-1.105;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,43:44:69:1007,69,0
CP000253.1 374711 . C T 931.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:66:960,66,0
CP000253.1 374717 . T A 799.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:57:828,57,0
CP000253.1 374720 . T A 837.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:60:866,60,0
CP000253.1 374726 . G A 800.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:57:829,57,0
CP000253.1 374734 . A T 788.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:57:817,57,0
CP000253.1 374743 . G T 741.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:54:770,54,0
CP000253.1 374748 . G C 604.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:633,45,0
CP000253.1 374765 . A G 405.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:434,30,0
CP000253.1 374821 . A C 352.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8245;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:381,27,0
CP000253.1 374825 . A G 311.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:340,24,0
CP000253.1 374899 . G A 445.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4498;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:474,33,0
CP000253.1 374925 . T G 511.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:39:540,39,0
CP000253.1 374926 . T C 525.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:39:554,39,0
CP000253.1 374952 . G A 536.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.47;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:565,39,0
CP000253.1 374991 . G A 622.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:651,45,0
CP000253.1 375025 . T C 1352.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1138;MLEAC=2;MLEAF=1.00;MQ=59.75;MQ0=0;QD=22.18;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:62:96:1381,96,0
CP000253.1 375081 . T G 1544.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.948;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1669;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.76;ReadPosRankSum=1.490;SOR=0.405 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1573,108,0
CP000253.1 375139 . C A 1515.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1544,105,0
CP000253.1 375177 . A C 1327.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1356,93,0
CP000253.1 375184 . C T 1287.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1316,90,0
CP000253.1 375194 . G T 1202.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1231,84,0
CP000253.1 375228 . A G 902.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:66:931,66,0
CP000253.1 375252 . A G 678.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:707,48,0
CP000253.1 375254 . G A 632.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:661,45,0
CP000253.1 375262 . A G 450.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:479,33,0
CP000253.1 375713 . T G 2821.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.699;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.54;ReadPosRankSum=1.221;SOR=0.689 GT:AD:DP:GQ:PL 1/1:1,114:115:99:2850,202,0
CP000253.1 375758 . G T 3133.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.859;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1323;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.92;ReadPosRankSum=1.244;SOR=0.473 GT:AD:DP:GQ:PL 1/1:1,130:131:99:3162,223,0
CP000253.1 375977 . T C 5040.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.828;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.40;ReadPosRankSum=-0.452;SOR=0.386 GT:AD:DP:GQ:PL 1/1:1,183:184:99:5069,367,0
CP000253.1 375981 . G A 5112.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9467;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.64;SOR=1.142 GT:AD:DP:GQ:PL 1/1:0,185:187:99:5141,379,0
CP000253.1 375986 . T A 5038.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.823;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.53;ReadPosRankSum=0.994;SOR=0.440 GT:AD:DP:GQ:PL 1/1:1,182:183:99:5067,367,0
CP000253.1 375995 . G T 4716.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.518;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7550;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.58;ReadPosRankSum=-1.631;SOR=0.217 GT:AD:DP:GQ:PL 1/1:2,169:171:99:4745,315,0
CP000253.1 376001 . C T 4819.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.86;SOR=1.083 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4848,352,0
CP000253.1 376436 . T G 4075.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.605;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.00;ReadPosRankSum=1.148;SOR=0.944 GT:AD:DP:GQ:PL 1/1:1,162:163:99:4104,295,0
CP000253.1 376862 . G A 828.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:60:857,60,0
CP000253.1 376865 . G T 790.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:57:819,57,0
CP000253.1 376988 . C T 1318.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1347,93,0
CP000253.1 377322 . C T 771.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:57:800,57,0
CP000253.1 377445 . T A 1672.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1701,117,0
CP000253.1 377457 . C T 1675.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1704,117,0
CP000253.1 377466 . A T 1716.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1745,120,0
CP000253.1 377472 . A G 1670.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1699,117,0
CP000253.1 377477 . T G 1505.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.284;DP=61;Dels=0.00;ExcessHet=3.0103;FS=3.229;HaplotypeScore=0.9958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.68;ReadPosRankSum=-1.566;SOR=0.435 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1534,108,0
CP000253.1 377481 . A T 1579.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1608,111,0
CP000253.1 377484 . C A 1568.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1597,111,0
CP000253.1 377492 . G T 1846.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1875,129,0
CP000253.1 378664 . G A 1799.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.781;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.08;ReadPosRankSum=1.131;SOR=0.302 GT:AD:DP:GQ:PL 1/1:1,68:70:99:1828,132,0
CP000253.1 378691 . T C 3001.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0750;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=1.109 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3030,217,0
CP000253.1 378960 . T C 4669.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,194:197:99:4698,334,0
CP000253.1 379176 . T C 4704.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6567;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,185:187:99:4733,334,0
CP000253.1 379399 . C G 2133.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,78:81:99:2162,157,0
CP000253.1 379554 . T A 3352.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.763;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.79;ReadPosRankSum=1.000;SOR=0.347 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3381,241,0
CP000253.1 379803 . C T 4202.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8068;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4231,298,0
CP000253.1 379863 . C T 2451.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2480,175,0
CP000253.1 379899 . C T 2171.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,86:87:99:2200,157,0
CP000253.1 379995 . C T 585.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:614,42,0
CP000253.1 380371 . T A 2711.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0507;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=1.279 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2740,199,0
CP000253.1 380521 . G A 4490.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5526;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,193:195:99:4519,316,0
CP000253.1 380533 . C T 4552.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7388;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,201:202:99:4581,319,0
CP000253.1 380545 . A G 4543.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8570;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,200:201:99:4572,316,0
CP000253.1 380635 . T C 4054.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.654;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.44;ReadPosRankSum=1.112;SOR=0.335 GT:AD:DP:GQ:PL 1/1:1,172:173:99:4083,289,0
CP000253.1 380662 . G A 3833.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,155:156:99:3862,271,0
CP000253.1 380986 . T C 3598.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=1.043 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3627,259,0
CP000253.1 381043 . A T 3972.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6314;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.998 GT:AD:DP:GQ:PL 1/1:0,155:156:99:4001,283,0
CP000253.1 381328 . C T 3709.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,144:146:99:3738,268,0
CP000253.1 381334 . C T 3883.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3912,280,0
CP000253.1 381337 . A T 3851.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3880,277,0
CP000253.1 381865 . T C 4286.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,167:170:99:4315,304,0
CP000253.1 382180 . C T 3623.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.792;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.07;ReadPosRankSum=-0.661;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,138:140:99:3652,265,0
CP000253.1 382210 . T G 3301.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.815;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.40;ReadPosRankSum=-0.253;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3330,241,0
CP000253.1 382261 . T C 3372.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3401,244,0
CP000253.1 382264 . T C 3263.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7632;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,122:124:99:3292,238,0
CP000253.1 382267 . T C 3364.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8691;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.92;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3393,244,0
CP000253.1 382270 . C A 3342.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.992;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.74;ReadPosRankSum=0.499;SOR=0.279 GT:AD:DP:GQ:PL 1/1:1,124:125:99:3371,241,0
CP000253.1 382290 . G A 3764.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.89;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3793,271,0
CP000253.1 382294 . T A 3775.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.838;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.04;ReadPosRankSum=1.231;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,144:145:99:3804,271,0
CP000253.1 382303 . A G 3570.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6580;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3599,256,0
CP000253.1 382324 . C T 3568.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3597,256,0
CP000253.1 382354 . A C 3494.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,133:135:99:3523,250,0
CP000253.1 382384 . C T 3683.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3712,262,0
CP000253.1 382405 . A T 3745.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6493;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.14;ReadPosRankSum=1.570;SOR=0.266 GT:AD:DP:GQ:PL 1/1:1,148:149:99:3774,268,0
CP000253.1 382412 . C T 4020.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2114;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,153:155:99:4049,286,0
CP000253.1 382429 . A T 3904.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9315;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3933,280,0
CP000253.1 382432 . T G 3922.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.773;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0326;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.15;ReadPosRankSum=0.389;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,155:157:99:3951,280,0
CP000253.1 382501 . G A 3689.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,141:142:99:3718,262,0
CP000253.1 382516 . T G 3601.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.900;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.73;ReadPosRankSum=1.002;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,139:140:99:3630,259,0
CP000253.1 382555 . C T 3134.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5065;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3163,226,0
CP000253.1 382627 . C T 3109.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3138,226,0
CP000253.1 382654 . G T 3134.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3163,226,0
CP000253.1 382717 . A G 3562.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.79;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3591,259,0
CP000253.1 382837 . G A 3952.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3981,283,0
CP000253.1 382861 . A G 3981.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.549;DP=159;Dels=0.00;ExcessHet=3.0103;FS=3.274;HaplotypeScore=14.3962;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=1.090;SOR=0.358 GT:AD:DP:GQ:PL 1/1:2,157:159:99:4010,286,0
CP000253.1 383083 . T C 3103.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.526;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.25;ReadPosRankSum=-0.745;SOR=0.271 GT:AD:DP:GQ:PL 1/1:1,127:128:99:3132,226,0
CP000253.1 383107 . T C 2655.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2684,190,0
CP000253.1 383158 . T A 2215.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.02;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2244,160,0
CP000253.1 383182 . T C 1951.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,74:76:99:1980,144,0
CP000253.1 383191 . C T 1769.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1798,129,0
CP000253.1 383671 . G T 179.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.99;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:15:208,15,0
CP000253.1 383813 . C T 828.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9248;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:60:857,60,0
CP000253.1 383883 . A T 1115.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:78:1144,78,0
CP000253.1 383947 . C T 1248.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1277,87,0
CP000253.1 383959 . T A 1548.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1577,111,0
CP000253.1 383997 . A G 1674.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1703,117,0
CP000253.1 384043 . G A 1811.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1840,126,0
CP000253.1 384052 . G A 1829.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1858,129,0
CP000253.1 384113 . A G 1231.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1260,87,0
CP000253.1 384548 . T A 405.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.199;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.54;ReadPosRankSum=-0.580;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,17:18:30:434,30,0
CP000253.1 384565 . C T 312.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:341,24,0
CP000253.1 384807 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 384911 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 385150 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 385668 . A G 137.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:165,12,0
CP000253.1 385921 . G T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 385969 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 386014 . A G 262.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:291,21,0
CP000253.1 386031 . T A 273.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:302,21,0
CP000253.1 386080 . A T 276.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6703;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:305,21,0
CP000253.1 386092 . G A 274.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:303,21,0
CP000253.1 386108 . A C 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 386137 . T G 173.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:202,15,0
CP000253.1 386138 . A G 180.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:209,15,0
CP000253.1 386274 . G T 252.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.45;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:14:21:281,21,0
CP000253.1 386296 . C T 309.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:24:338,24,0
CP000253.1 386297 . T A 298.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:24:327,24,0
CP000253.1 386321 . T C 276.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:15:21:305,21,0
CP000253.1 386415 . G A 492.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:521,36,0
CP000253.1 386425 . T A 491.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:520,36,0
CP000253.1 386451 . A C 574.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:603,42,0
CP000253.1 386458 . T C 621.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:650,45,0
CP000253.1 386475 . C A 740.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:54:769,54,0
CP000253.1 386526 . C T 1035.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1064,75,0
CP000253.1 386530 . A C 1052.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1081,75,0
CP000253.1 386539 . A C 1036.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,41:42:75:1065,75,0
CP000253.1 386543 . T A 1023.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1052,75,0
CP000253.1 386544 . T A 1042.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1071,75,0
CP000253.1 386546 . G A 1051.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1080,75,0
CP000253.1 386553 . T C 1036.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1065,75,0
CP000253.1 386564 . T C 1133.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1162,81,0
CP000253.1 386566 . C A 1133.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1162,81,0
CP000253.1 386580 . C A 2020.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2049,144,0
CP000253.1 386581 . C A 2017.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2046,144,0
CP000253.1 386718 . C T 3607.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0379;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,157:158:99:3636,250,0
CP000253.1 386960 . A G 646.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:48:675,48,0
CP000253.1 387036 . G T 1474.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7763;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1503,105,0
CP000253.1 387081 . C G 1524.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1553,108,0
CP000253.1 387124 . A G 1839.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.246;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.00;ReadPosRankSum=-1.250;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,78:81:91:1868,91,0
CP000253.1 387157 . C T 1979.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9674;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2008,138,0
CP000253.1 387196 . T A 1803.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:76:99:1832,126,0
CP000253.1 387223 . G A 1940.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2755;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:81:99:1969,135,0
CP000253.1 387238 . G A 1678.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2416;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1707,117,0
CP000253.1 387328 . G A 1356.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1385,99,0
CP000253.1 387376 . T G 1977.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2006,141,0
CP000253.1 387421 . G A 3095.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7975;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.69;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3124,223,0
CP000253.1 387438 . C A 2857.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2886,208,0
CP000253.1 387444 . G A 2945.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2974,211,0
CP000253.1 387450 . C A 3089.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3118,220,0
CP000253.1 387457 . A T 3102.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3131,220,0
CP000253.1 387460 . A G 3019.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9135;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3048,214,0
CP000253.1 387469 . A G 3049.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3078,220,0
CP000253.1 387684 . G A 3821.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,164:165:99:3850,265,0
CP000253.1 387694 . G A 3750.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4705;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,158:159:99:3779,262,0
CP000253.1 387703 . T A 3767.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,160:160:99:3796,262,0
CP000253.1 387867 . T C 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 387871 . G T 184.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:213,15,0
CP000253.1 387903 . C G 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 387919 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 387923 . A C 52.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:80,6,0
CP000253.1 387924 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 387943 . A T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 387946 . A G 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 387964 . G A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 388005 . A T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 388387 . G A 622.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:651,45,0
CP000253.1 388419 . A G 615.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:45:644,45,0
CP000253.1 388440 . A G 322.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:351,24,0
CP000253.1 388441 . A G 324.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:353,24,0
CP000253.1 388461 . G T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 388469 . T A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 388540 . C G 549.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:578,39,0
CP000253.1 388557 . T C 638.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9996;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:45:667,45,0
CP000253.1 388569 . C T 817.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:57:846,57,0
CP000253.1 388575 . A C 848.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.073;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.76;ReadPosRankSum=1.048;SOR=0.386 GT:AD:DP:GQ:PL 1/1:1,38:39:60:877,60,0
CP000253.1 388581 . A G 974.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.15;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1003,69,0
CP000253.1 388650 . T A 1255.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1284,87,0
CP000253.1 388657 . T A 134.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:162,12,0
CP000253.1 388662 . T C 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 388666 . G C 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 388667 . T A 141.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:169,12,0
CP000253.1 388668 . G A 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 388670 . A C 137.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:165,12,0
CP000253.1 388671 . G T 134.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:162,12,0
CP000253.1 388673 . A T 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 388680 . T C 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 388686 . C A 128.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:156,12,0
CP000253.1 388687 . A C 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 388689 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 388692 . G A 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 388698 . T C 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 388699 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 388701 . A T 137.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:165,12,0
CP000253.1 388715 . A G 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 388719 . T A 136.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:164,12,0
CP000253.1 388725 . T A 134.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:162,12,0
CP000253.1 388726 . G C 134.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:162,12,0
CP000253.1 388727 . T C 139.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:167,12,0
CP000253.1 388736 . A G 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 388740 . T A 139.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:167,12,0
CP000253.1 388744 . T C 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 388746 . C A 141.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:169,12,0
CP000253.1 388751 . C A 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 388752 . A T 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 388770 . A G 906.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:63:935,63,0
CP000253.1 388803 . G A 1211.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:84:1240,84,0
CP000253.1 388806 . T C 1234.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1263,87,0
CP000253.1 388866 . T A 1355.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:93:1384,93,0
CP000253.1 388874 . C A 1310.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.22;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:90:1339,90,0
CP000253.1 388876 . A T 1301.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:90:1330,90,0
CP000253.1 388884 . A T 1292.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:58:90:1321,90,0
CP000253.1 388926 . G T 902.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:42:63:931,63,0
CP000253.1 388929 . A T 866.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.8278;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:60:895,60,0
CP000253.1 388946 . T C 760.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:789,54,0
CP000253.1 388947 . T A 777.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:806,54,0
CP000253.1 389207 . A G 228.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:11:18:257,18,0
CP000253.1 389405 . A C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 389505 . T C 227.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:10:18:256,18,0
CP000253.1 389506 . A C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 389628 . G T 662.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:48:691,48,0
CP000253.1 389681 . A C 618.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:45:647,45,0
CP000253.1 389690 . C T 574.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:603,42,0
CP000253.1 389820 . A G 580.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:609,42,0
CP000253.1 389829 . A C 619.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6487;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:45:648,45,0
CP000253.1 389945 . T G 1151.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:81:1180,81,0
CP000253.1 389952 . A T 1211.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:84:1240,84,0
CP000253.1 389956 . C T 1251.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1280,87,0
CP000253.1 389960 . T C 1131.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:78:1160,78,0
CP000253.1 389969 . T C 1041.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:72:1070,72,0
CP000253.1 389980 . G T 1041.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:72:1070,72,0
CP000253.1 390049 . T C 943.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.47;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:66:972,66,0
CP000253.1 390081 . T C 585.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:614,42,0
CP000253.1 390088 . C A 526.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:555,39,0
CP000253.1 390143 . G A 263.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:292,21,0
CP000253.1 390237 . C T 1126.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.17;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,40:40:84:1155,84,0
CP000253.1 390251 . A T 1378.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.664;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.03;ReadPosRankSum=1.944;SOR=1.770 GT:AD:DP:GQ:PL 1/1:2,49:51:99:1407,102,0
CP000253.1 390256 . G A 1405.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.654 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1434,102,0
CP000253.1 390558 . A T 3256.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.520;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9225;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=1.512;SOR=0.115 GT:AD:DP:GQ:PL 1/1:2,129:134:99:3285,235,0
CP000253.1 390770 . T C 1902.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1931,135,0
CP000253.1 390773 . A G 1869.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1898,135,0
CP000253.1 390810 . A T 1615.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1644,114,0
CP000253.1 390968 . G A 451.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:480,33,0
CP000253.1 391017 . A G 676.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.83;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:705,48,0
CP000253.1 391027 . T C 707.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:736,51,0
CP000253.1 391038 . A G 867.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:63:896,63,0
CP000253.1 391220 . A G 1672.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1701,117,0
CP000253.1 391268 . C T 1511.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1540,105,0
CP000253.1 391277 . T A 1271.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1300,90,0
CP000253.1 391280 . C T 1188.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1217,84,0
CP000253.1 391283 . T A 1188.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.977;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5658;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.31;ReadPosRankSum=0.204;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,50:51:84:1217,84,0
CP000253.1 391286 . T C 1183.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1212,84,0
CP000253.1 391295 . C A 1185.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1214,84,0
CP000253.1 391324 . A G 1380.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:96:1409,96,0
CP000253.1 391343 . T A 1646.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1675,114,0
CP000253.1 391350 . A T 1695.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1724,117,0
CP000253.1 391477 . A T 1520.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1549,108,0
CP000253.1 391479 . T C 1514.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1543,105,0
CP000253.1 391515 . T G 1453.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.014;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.72;ReadPosRankSum=-1.227;SOR=0.273 GT:AD:DP:GQ:PL 1/1:1,63:64:99:1482,102,0
CP000253.1 391695 . G A 1335.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6231;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1364,96,0
CP000253.1 391734 . A G 1296.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.384;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7294;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.92;ReadPosRankSum=-0.615;SOR=0.485 GT:AD:DP:GQ:PL 1/1:1,61:63:96:1325,96,0
CP000253.1 391760 . C A 1598.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.847;DP=71;Dels=0.00;ExcessHet=3.0103;FS=3.144;HaplotypeScore=8.8556;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.52;ReadPosRankSum=0.658;SOR=0.277 GT:AD:DP:GQ:PL 1/1:3,68:71:92:1627,92,0
CP000253.1 391778 . T C 1549.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1578,111,0
CP000253.1 391828 . A G 1546.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:68:99:1575,114,0
CP000253.1 391869 . C T 1185.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.863;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7423;MLEAC=2;MLEAF=1.00;MQ=59.49;MQ0=0;MQRankSum=5.100;QD=22.80;ReadPosRankSum=0.952;SOR=0.859 GT:AD:DP:GQ:PL 1/1:2,50:53:73:1214,73,0
CP000253.1 391881 . A G 1084.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.739;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4066;MLEAC=2;MLEAF=1.00;MQ=59.41;MQ0=0;MQRankSum=0.000;QD=24.11;ReadPosRankSum=-1.425;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,44:46:78:1113,78,0
CP000253.1 391885 . G A 1135.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.749;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3005;MLEAC=2;MLEAF=1.00;MQ=59.41;MQ0=0;MQRankSum=6.784;QD=25.24;ReadPosRankSum=1.425;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,44:46:64:1164,64,0
CP000253.1 391900 . G C 952.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7562;MLEAC=2;MLEAF=1.00;MQ=59.25;MQ0=0;QD=27.22;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:72:981,72,0
CP000253.1 391902 . A G 865.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.511;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1914;MLEAC=2;MLEAF=1.00;MQ=59.25;MQ0=0;MQRankSum=6.002;QD=24.74;ReadPosRankSum=1.140;SOR=0.399 GT:AD:DP:GQ:PL 1/1:1,34:36:66:894,66,0
CP000253.1 391905 . T C 974.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4201;MLEAC=2;MLEAF=1.00;MQ=59.25;MQ0=0;QD=27.08;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:75:1003,75,0
CP000253.1 391917 . G A 905.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.224;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7714;MLEAC=2;MLEAF=1.00;MQ=59.18;MQ0=0;MQRankSum=5.834;QD=27.45;ReadPosRankSum=0.158;SOR=0.412 GT:AD:DP:GQ:PL 1/1:1,32:33:49:934,49,0
CP000253.1 391918 . C T 916.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.714;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7714;MLEAC=2;MLEAF=1.00;MQ=59.18;MQ0=0;MQRankSum=5.834;QD=27.78;ReadPosRankSum=0.158;SOR=0.412 GT:AD:DP:GQ:PL 1/1:1,32:33:69:945,69,0
CP000253.1 392137 . G A 392.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:421,30,0
CP000253.1 392142 . C T 355.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:384,27,0
CP000253.1 392166 . T A 431.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.78;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:33:460,33,0
CP000253.1 392178 . T A 422.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.18;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:33:451,33,0
CP000253.1 392184 . T C 464.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.98;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:36:493,36,0
CP000253.1 392198 . G A 490.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.87;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:39:519,39,0
CP000253.1 392247 . T A 489.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,18:18:39:518,39,0
CP000253.1 392253 . C A 473.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,18:18:36:502,36,0
CP000253.1 392254 . A T 432.31 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.858;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.02;ReadPosRankSum=1.065;SOR=0.551 GT:AD:DP:GQ:PL 0/1:1,17:18:1:458,0,1
CP000253.1 392257 . C G 467.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9309;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;QD=27.52;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:18:36:493,36,0
CP000253.1 392264 . A G 592.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.64;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,20:20:45:621,45,0
CP000253.1 392268 . T C 632.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.13;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,21:21:48:661,48,0
CP000253.1 392271 . T G 635.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.64;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,23:23:48:664,48,0
CP000253.1 392337 . G A 946.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:69:975,69,0
CP000253.1 392394 . A G 1144.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.795;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.85;ReadPosRankSum=1.301;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,47:48:84:1173,84,0
CP000253.1 392448 . A T 1210.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:52:87:1239,87,0
CP000253.1 392449 . A C 1224.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.936;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.55;ReadPosRankSum=1.600;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,51:52:87:1253,87,0
CP000253.1 392493 . A C 1749.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2575;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1778,126,0
CP000253.1 392526 . G A 1868.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3370;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1897,132,0
CP000253.1 392559 . T C 1895.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:79:99:1924,138,0
CP000253.1 392655 . A C 1983.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0979;MLEAC=2;MLEAF=1.00;MQ=59.84;MQ0=0;QD=25.11;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2012,141,0
CP000253.1 392751 . A T 1823.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.764;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5246;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;MQRankSum=8.945;QD=23.09;ReadPosRankSum=-1.539;SOR=0.386 GT:AD:DP:GQ:PL 1/1:1,78:80:99:1852,129,0
CP000253.1 392800 . G A 1482.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:61:99:1511,108,0
CP000253.1 392868 . C G 832.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:60:861,60,0
CP000253.1 392897 . T C 1245.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.646;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.51;ReadPosRankSum=0.597;SOR=0.343 GT:AD:DP:GQ:PL 1/1:1,52:57:90:1274,90,0
CP000253.1 392900 . C T 1529.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:65:99:1558,108,0
CP000253.1 392980 . A G 2637.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5082;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.35;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2666,184,0
CP000253.1 393070 . A G 2637.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,117:118:99:2666,184,0
CP000253.1 393264 . T C 1327.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:59:96:1356,96,0
CP000253.1 393303 . G A 1587.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1616,111,0
CP000253.1 393309 . C T 1535.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:68:99:1564,108,0
CP000253.1 393312 . T C 1573.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1602,111,0
CP000253.1 393315 . T C 1622.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1651,114,0
CP000253.1 393627 . C T 317.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:346,24,0
CP000253.1 393761 . A C 698.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;MQRankSum=0.000;QD=23.29;ReadPosRankSum=1.209;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,29:31:51:727,51,0
CP000253.1 393835 . T A 534.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;QD=21.39;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:563,39,0
CP000253.1 393836 . C T 534.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;QD=21.39;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:563,39,0
CP000253.1 393840 . C T 539.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;QD=21.59;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:568,39,0
CP000253.1 393842 . T A 520.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.020;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;MQRankSum=0.000;QD=20.83;ReadPosRankSum=-0.767;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,24:25:39:549,39,0
CP000253.1 393847 . C G 539.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7440;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;QD=21.59;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:568,39,0
CP000253.1 393848 . T C 546.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7440;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;QD=21.87;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:575,39,0
CP000253.1 393852 . C A 545.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7440;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;QD=22.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:25:39:574,39,0
CP000253.1 393880 . G A 488.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.43;MQ0=0;QD=21.25;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:517,36,0
CP000253.1 393918 . C T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 393942 . C T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 393955 . C T 10.90 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.00;MQ0=0;QD=10.90;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:37,3,0
CP000253.1 393962 . T C 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 393965 . G A 10.90 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.00;MQ0=0;QD=10.90;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:37,3,0
CP000253.1 395035 . T C 52.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.34;MQ0=0;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:3:6:80,6,0
CP000253.1 395138 . A G 91.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:119,9,0
CP000253.1 395237 . G A 130.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:158,12,0
CP000253.1 395320 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 395323 . A C 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 395375 . C T 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 395434 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 395473 . T A 216.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.68;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:245,18,0
CP000253.1 395500 . T A 161.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:190,15,0
CP000253.1 395512 . G T 191.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:220,15,0
CP000253.1 395522 . G A 259.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:288,21,0
CP000253.1 395528 . A C 261.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:290,21,0
CP000253.1 395537 . A C 266.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:295,21,0
CP000253.1 395539 . A G 274.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:303,21,0
CP000253.1 395540 . G A 235.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:264,18,0
CP000253.1 395575 . C T 276.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:305,21,0
CP000253.1 395582 . T C 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 395697 . C T 271.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:300,21,0
CP000253.1 395747 . C A 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 395749 . A G 269.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:298,21,0
CP000253.1 395752 . T A 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 395759 . A G 315.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:344,24,0
CP000253.1 395764 . T A 315.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:344,24,0
CP000253.1 395821 . T C 407.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:436,30,0
CP000253.1 395823 . G A 397.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:426,30,0
CP000253.1 395824 . A G 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 395825 . G A 405.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:434,30,0
CP000253.1 395831 . C G 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 395835 . A T 406.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:435,30,0
CP000253.1 395855 . T C 531.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:560,39,0
CP000253.1 395900 . A C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 395902 . T A 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 395905 . G T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 395908 . T A 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 395910 . A C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 395918 . T A 231.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:260,18,0
CP000253.1 395920 . G T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 395923 . A T 218.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:247,18,0
CP000253.1 395934 . G T 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 395938 . G A 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 395939 . T C 320.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.39;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:349,24,0
CP000253.1 395951 . C T 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 395996 . G A 536.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:565,39,0
CP000253.1 396006 . C T 400.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:429,30,0
CP000253.1 396008 . T C 396.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:425,30,0
CP000253.1 396010 . A C 402.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:431,30,0
CP000253.1 396013 . T A 397.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:426,30,0
CP000253.1 396014 . T A 402.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:431,30,0
CP000253.1 396019 . A G 387.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:416,30,0
CP000253.1 396026 . T C 393.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:422,30,0
CP000253.1 396031 . A T 402.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:431,30,0
CP000253.1 396036 . C A 402.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:431,30,0
CP000253.1 396037 . T G 395.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:424,30,0
CP000253.1 396051 . T G 442.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:471,33,0
CP000253.1 396058 . C T 442.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:471,33,0
CP000253.1 396074 . T G 492.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=69.5886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:521,36,0
CP000253.1 396086 . A G 442.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.109;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.30;ReadPosRankSum=1.741;SOR=0.556 GT:AD:DP:GQ:PL 1/1:1,18:19:33:471,33,0
CP000253.1 396098 . T C 436.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:465,33,0
CP000253.1 396104 . G A 439.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:468,33,0
CP000253.1 396107 . C T 446.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:475,33,0
CP000253.1 396108 . T C 441.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:470,33,0
CP000253.1 396120 . C T 455.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:21:33:484,33,0
CP000253.1 396139 . C T 414.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.83;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:443,30,0
CP000253.1 396151 . A C 403.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.25;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:432,30,0
CP000253.1 396161 . G T 277.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:21:306,21,0
CP000253.1 396214 . G T 275.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.22;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:304,21,0
CP000253.1 396269 . C T 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 396289 . T C 168.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:197,15,0
CP000253.1 396309 . A G 181.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:210,15,0
CP000253.1 396527 . G A 682.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.02;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:711,48,0
CP000253.1 396644 . A G 537.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:566,39,0
CP000253.1 396950 . A G 138.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:166,12,0
CP000253.1 396994 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 397050 . T A 48.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:76,6,0
CP000253.1 397108 . A G 230.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:259,18,0
CP000253.1 397111 . A T 212.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:241,18,0
CP000253.1 397113 . C G 256.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.40;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:285,21,0
CP000253.1 397118 . G A 268.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:297,21,0
CP000253.1 397127 . T C 263.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:292,21,0
CP000253.1 397159 . A C 203.31 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.838;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=16.94;ReadPosRankSum=-0.086;SOR=1.255 GT:AD:DP:GQ:PL 0/1:3,9:12:1:229,0,1
CP000253.1 397316 . A C 438.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.880;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.09;ReadPosRankSum=1.378;SOR=0.556 GT:AD:DP:GQ:PL 1/1:1,18:19:33:467,33,0
CP000253.1 397331 . C T 533.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:562,39,0
CP000253.1 397334 . T C 497.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.64;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:526,36,0
CP000253.1 397349 . A T 582.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:611,42,0
CP000253.1 397362 . A G 545.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.099;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.83;ReadPosRankSum=1.742;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,24:25:39:574,39,0
CP000253.1 397365 . A T 545.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:574,39,0
CP000253.1 397366 . A G 543.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:572,39,0
CP000253.1 397368 . G A 544.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:573,39,0
CP000253.1 397369 . A T 535.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:564,39,0
CP000253.1 397374 . T A 545.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:574,39,0
CP000253.1 397429 . C A 842.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:871,60,0
CP000253.1 397432 . A G 845.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:874,60,0
CP000253.1 397436 . G T 839.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:868,60,0
CP000253.1 397522 . C T 796.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:57:825,57,0
CP000253.1 397536 . T C 819.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:60:848,60,0
CP000253.1 397560 . C T 791.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:57:820,57,0
CP000253.1 397581 . A C 793.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:57:822,57,0
CP000253.1 397594 . G A 795.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:57:824,57,0
CP000253.1 397599 . T C 755.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:784,54,0
CP000253.1 397605 . A G 757.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:786,54,0
CP000253.1 397609 . T C 758.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:787,54,0
CP000253.1 397611 . A G 753.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:782,54,0
CP000253.1 397795 . A C 927.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:66:956,66,0
CP000253.1 397812 . C T 887.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:63:916,63,0
CP000253.1 397821 . T C 886.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:63:915,63,0
CP000253.1 397845 . A G 577.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:606,42,0
CP000253.1 397860 . C T 436.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:465,33,0
CP000253.1 397876 . C A 362.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:391,27,0
CP000253.1 397878 . C G 347.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.74;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:376,27,0
CP000253.1 397882 . A G 351.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:380,27,0
CP000253.1 397908 . A C 298.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.34;ReadPosRankSum=-0.498;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,13:14:24:327,24,0
CP000253.1 397909 . A G 306.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:335,24,0
CP000253.1 397914 . T A 317.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:346,24,0
CP000253.1 397929 . T C 309.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:338,24,0
CP000253.1 397935 . C T 313.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:342,24,0
CP000253.1 397956 . G A 224.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:253,18,0
CP000253.1 397957 . C T 221.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:250,18,0
CP000253.1 397961 . A T 218.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:247,18,0
CP000253.1 397992 . A T 217.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.23;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:246,18,0
CP000253.1 398055 . C T 296.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:325,24,0
CP000253.1 398085 . G A 348.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:27:377,27,0
CP000253.1 398108 . G A 355.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:384,27,0
CP000253.1 398112 . T C 485.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:514,36,0
CP000253.1 398222 . G A 395.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:30:424,30,0
CP000253.1 398444 . G A 2012.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=1.194 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2041,144,0
CP000253.1 398546 . A G 3448.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.727;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.54;ReadPosRankSum=1.223;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,152:153:99:3477,241,0
CP000253.1 398550 . T C 3567.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1858;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,154:157:99:3596,247,0
CP000253.1 398618 . C T 3632.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1602;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,161:161:99:3661,250,0
CP000253.1 398624 . A G 3557.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5635;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3586,247,0
CP000253.1 398717 . T G 2569.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2819;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2598,184,0
CP000253.1 398720 . C T 2532.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9387;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2561,181,0
CP000253.1 398903 . A G 261.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:290,21,0
CP000253.1 399104 . C A 185.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.66;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:214,15,0
CP000253.1 399117 . T A 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 399214 . G T 607.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:45:636,45,0
CP000253.1 399249 . A G 558.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:587,42,0
CP000253.1 399252 . G T 573.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:602,42,0
CP000253.1 399253 . G A 567.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:596,42,0
CP000253.1 399259 . T A 567.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:596,42,0
CP000253.1 399553 . C T 1007.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=48.23;MQ0=1;QD=21.91;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,46:46:72:1036,72,0
CP000253.1 399556 . C T 916.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6158;MLEAC=2;MLEAF=1.00;MQ=47.02;MQ0=1;QD=21.83;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,42:42:66:945,66,0
CP000253.1 399580 . C T 682.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=41.61;MQ0=1;QD=23.54;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,29:29:51:711,51,0
CP000253.1 399589 . C T 465.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.27;MQ0=1;QD=23.29;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,20:20:36:494,36,0
CP000253.1 399607 . A T 130.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=27.83;MQ0=1;QD=16.25;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,8:8:12:158,12,0
CP000253.1 399619 . C T 128.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=27.83;MQ0=1;QD=16.00;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,8:8:12:156,12,0
CP000253.1 399640 . G A 127.03 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=24.18;MQ0=4;QD=11.55;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,11:11:12:155,12,0
CP000253.1 399644 . G C 98.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.383;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=27.76;MQ0=4;MQRankSum=1.383;QD=9.83;ReadPosRankSum=0.210;SOR=0.941 GT:AD:DP:GQ:PL 1/1:1,9:11:9:126,9,0
CP000253.1 399703 . C T 589.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.26;MQ0=6;QD=16.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:45:618,45,0
CP000253.1 399706 . G C 594.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.26;MQ0=6;QD=16.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:45:623,45,0
CP000253.1 399709 . G A 601.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=37.26;MQ0=6;QD=16.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:45:630,45,0
CP000253.1 399715 . A G 577.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=37.26;MQ0=6;QD=16.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:45:606,45,0
CP000253.1 399740 . T C 606.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=35.30;MQ0=8;QD=14.80;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,41:42:45:635,45,0
CP000253.1 399772 . T A 575.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=33.88;MQ0=8;QD=14.04;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,41:42:42:604,42,0
CP000253.1 399790 . T C 676.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9894;MLEAC=2;MLEAF=1.00;MQ=31.57;MQ0=10;QD=13.01;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,52:52:51:705,51,0
CP000253.1 399793 . G A 695.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0847;MLEAC=2;MLEAF=1.00;MQ=31.57;MQ0=10;QD=13.38;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,52:52:51:724,51,0
CP000253.1 399835 . T A 692.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2143;MLEAC=2;MLEAF=1.00;MQ=28.36;MQ0=16;QD=11.55;SOR=0.883 GT:AD:DP:GQ:PL 1/1:2,58:60:51:721,51,0
CP000253.1 399836 . T C 688.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3744;MLEAC=2;MLEAF=1.00;MQ=28.36;MQ0=16;QD=11.48;SOR=0.883 GT:AD:DP:GQ:PL 1/1:3,57:60:51:717,51,0
CP000253.1 399841 . C T 687.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3744;MLEAC=2;MLEAF=1.00;MQ=28.36;MQ0=16;QD=11.66;SOR=0.941 GT:AD:DP:GQ:PL 1/1:2,57:60:51:716,51,0
CP000253.1 399844 . T C 651.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5937;MLEAC=2;MLEAF=1.00;MQ=28.36;MQ0=16;QD=10.86;SOR=0.883 GT:AD:DP:GQ:PL 1/1:2,58:60:48:680,48,0
CP000253.1 399850 . C T 683.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4604;MLEAC=2;MLEAF=1.00;MQ=27.72;MQ0=16;QD=10.68;SOR=0.963 GT:AD:DP:GQ:PL 1/1:2,62:64:51:712,51,0
CP000253.1 399859 . T C 695.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5937;MLEAC=2;MLEAF=1.00;MQ=27.98;MQ0=14;QD=10.87;SOR=1.051 GT:AD:DP:GQ:PL 1/1:2,62:64:54:724,54,0
CP000253.1 399889 . C T 736.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3536;MLEAC=2;MLEAF=1.00;MQ=26.15;MQ0=18;QD=10.53;SOR=1.036 GT:AD:DP:GQ:PL 1/1:2,68:70:57:765,57,0
CP000253.1 399919 . T C 615.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.1869;MLEAC=2;MLEAF=1.00;MQ=21.93;MQ0=18;QD=9.19;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,67:68:48:644,48,0
CP000253.1 399925 . C T 473.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=19.33;MQ0=17;QD=7.90;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,60:60:39:502,39,0
CP000253.1 399928 . A T 485.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9494;MLEAC=2;MLEAF=1.00;MQ=19.40;MQ0=17;QD=8.23;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,59:59:39:514,39,0
CP000253.1 399931 . T C 486.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3286;MLEAC=2;MLEAF=1.00;MQ=19.40;MQ0=17;QD=8.25;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,59:59:39:515,39,0
CP000253.1 399952 . G A 522.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9059;MLEAC=2;MLEAF=1.00;MQ=20.83;MQ0=17;QD=8.30;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,63:63:42:551,42,0
CP000253.1 400073 . C T 1303.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8210;MLEAC=2;MLEAF=1.00;MQ=32.60;MQ0=12;QD=14.17;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,92:93:93:1332,93,0
CP000253.1 400075 . G A 1310.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8077;MLEAC=2;MLEAF=1.00;MQ=32.60;MQ0=12;QD=14.25;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,92:93:93:1339,93,0
CP000253.1 400099 . A G 1312.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=33.80;MQ0=11;QD=14.92;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,88:88:93:1341,93,0
CP000253.1 400138 . T C 1283.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=34.02;MQ0=9;QD=14.76;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,87:87:90:1312,90,0
CP000253.1 400141 . A T 1288.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=34.09;MQ0=9;QD=14.99;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,86:86:93:1317,93,0
CP000253.1 400153 . A G 1226.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=34.03;MQ0=9;QD=14.96;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,82:82:90:1255,90,0
CP000253.1 400162 . T C 1230.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=34.28;MQ0=9;QD=15.38;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,80:80:90:1259,90,0
CP000253.1 400183 . T C 1033.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7094;MLEAC=2;MLEAF=1.00;MQ=35.35;MQ0=4;QD=16.15;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,64:64:75:1062,75,0
CP000253.1 400189 . G A 1033.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.043;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=35.63;MQ0=3;MQRankSum=1.750;QD=16.41;ReadPosRankSum=-1.560;SOR=0.374 GT:AD:DP:GQ:PL 1/1:1,62:63:75:1062,75,0
CP000253.1 400195 . C T 1032.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=35.63;MQ0=3;QD=16.39;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,63:63:75:1061,75,0
CP000253.1 400213 . C T 852.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3001;MLEAC=2;MLEAF=1.00;MQ=34.22;MQ0=3;QD=16.72;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,51:52:63:881,63,0
CP000253.1 400216 . A G 859.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.4679;MLEAC=2;MLEAF=1.00;MQ=34.22;MQ0=3;QD=16.53;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,52:52:63:888,63,0
CP000253.1 400225 . C T 851.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.875;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2398;MLEAC=2;MLEAF=1.00;MQ=33.97;MQ0=3;MQRankSum=-1.691;QD=16.70;ReadPosRankSum=0.434;SOR=1.009 GT:AD:DP:GQ:PL 1/1:1,50:51:63:880,63,0
CP000253.1 400231 . C T 757.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2035;MLEAC=2;MLEAF=1.00;MQ=33.20;MQ0=3;QD=15.79;SOR=1.154 GT:AD:DP:GQ:PL 1/1:0,48:48:57:786,57,0
CP000253.1 400234 . T C 764.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2035;MLEAC=2;MLEAF=1.00;MQ=33.20;MQ0=3;QD=15.93;SOR=1.154 GT:AD:DP:GQ:PL 1/1:0,48:48:57:793,57,0
CP000253.1 400261 . T A 490.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.0888;MLEAC=2;MLEAF=1.00;MQ=29.71;MQ0=1;QD=14.43;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,34:34:39:519,39,0
CP000253.1 400273 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.51;MQ0=1;QD=4.65;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,4:4:3:45,3,0
CP000253.1 400438 . A C 155.90 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=20.43;MQ0=9;QD=10.39;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,15:15:15:184,15,0
CP000253.1 400447 . A T 156.90 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=20.43;MQ0=9;QD=10.46;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,15:15:15:185,15,0
CP000253.1 400453 . T C 201.84 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=26.20;MQ0=9;QD=11.87;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,17:17:18:230,18,0
CP000253.1 400462 . T C 233.80 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=27.13;MQ0=9;QD=11.69;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,20:20:21:262,21,0
CP000253.1 400507 . T C 324.78 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=25.39;MQ0=9;QD=11.20;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,29:29:27:353,27,0
CP000253.1 400516 . T C 325.78 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=25.39;MQ0=9;QD=11.23;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,29:29:27:354,27,0
CP000253.1 400519 . G A 325.78 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=25.39;MQ0=9;QD=11.23;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,29:29:27:354,27,0
CP000253.1 400561 . T C 877.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2861;MLEAC=2;MLEAF=1.00;MQ=31.61;MQ0=19;QD=13.50;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,65:67:66:906,66,0
CP000253.1 400601 . C T 1009.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=31.85;MQ0=21;QD=13.83;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,73:73:75:1038,75,0
CP000253.1 400648 . T C 1097.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9973;MLEAC=2;MLEAF=1.00;MQ=32.28;MQ0=19;QD=14.64;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,75:75:81:1126,81,0
CP000253.1 400681 . A T 1467.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=34.26;MQ0=23;QD=16.13;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,91:91:99:1496,111,0
CP000253.1 400690 . T C 1490.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=33.83;MQ0=26;QD=15.69;SOR=1.478 GT:AD:DP:GQ:PL 1/1:0,95:95:99:1519,111,0
CP000253.1 400699 . G A 1551.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=33.84;MQ0=26;QD=15.83;SOR=1.394 GT:AD:DP:GQ:PL 1/1:0,98:98:99:1580,117,0
CP000253.1 400717 . T C 1815.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4374;MLEAC=2;MLEAF=1.00;MQ=34.95;MQ0=30;QD=15.93;SOR=1.275 GT:AD:DP:GQ:PL 1/1:0,114:114:99:1844,135,0
CP000253.1 400720 . C T 1852.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3315;MLEAC=2;MLEAF=1.00;MQ=35.31;MQ0=28;QD=16.54;SOR=1.347 GT:AD:DP:GQ:PL 1/1:0,112:113:99:1881,138,0
CP000253.1 400726 . C T 1955.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4377;MLEAC=2;MLEAF=1.00;MQ=37.22;MQ0=22;QD=17.94;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,109:110:99:1984,144,0
CP000253.1 400733 . C T 2100.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1744;MLEAC=2;MLEAF=1.00;MQ=37.65;MQ0=24;QD=18.11;SOR=1.346 GT:AD:DP:GQ:PL 1/1:0,116:118:99:2129,156,0
CP000253.1 400768 . T C 2361.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3619;MLEAC=2;MLEAF=1.00;MQ=42.64;MQ0=20;QD=19.20;SOR=1.072 GT:AD:DP:GQ:PL 1/1:0,123:124:99:2390,172,0
CP000253.1 400777 . A G 2453.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8833;MLEAC=2;MLEAF=1.00;MQ=43.89;MQ0=20;QD=19.47;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,126:126:99:2482,181,0
CP000253.1 400804 . A G 2521.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.582;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4210;MLEAC=2;MLEAF=1.00;MQ=45.81;MQ0=20;MQRankSum=0.112;QD=19.25;ReadPosRankSum=1.327;SOR=0.253 GT:AD:DP:GQ:PL 1/1:2,129:131:99:2550,182,0
CP000253.1 400807 . G A 2521.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8038;MLEAC=2;MLEAF=1.00;MQ=45.66;MQ0=20;QD=19.70;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,128:128:99:2550,181,0
CP000253.1 400849 . T C 2240.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5368;MLEAC=2;MLEAF=1.00;MQ=47.38;MQ0=20;QD=18.07;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,124:124:99:2269,163,0
CP000253.1 400870 . G A 2375.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0359;MLEAC=2;MLEAF=1.00;MQ=47.80;MQ0=20;QD=19.16;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,124:124:99:2404,172,0
CP000253.1 400946 . A G 2344.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.5385;MLEAC=2;MLEAF=1.00;MQ=54.34;MQ0=4;QD=22.12;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2373,169,0
CP000253.1 400952 . G A 2405.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.816;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0903;MLEAC=2;MLEAF=1.00;MQ=54.34;MQ0=4;MQRankSum=1.214;QD=22.70;ReadPosRankSum=1.699;SOR=0.787 GT:AD:DP:GQ:PL 1/1:1,105:107:99:2434,172,0
CP000253.1 400991 . A G 2309.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0021;MLEAC=2;MLEAF=1.00;MQ=55.77;MQ0=2;QD=23.57;SOR=1.251 GT:AD:DP:GQ:PL 1/1:0,98:100:99:2338,169,0
CP000253.1 402564 . G T 585.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:614,42,0
CP000253.1 402978 . T C 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 403030 . A G 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 403032 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 403066 . C A 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 403081 . G A 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 403083 . T C 189.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:218,15,0
CP000253.1 403089 . G C 188.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:217,15,0
CP000253.1 403091 . T A 189.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:218,15,0
CP000253.1 403092 . C T 190.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:219,15,0
CP000253.1 403095 . C T 188.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:217,15,0
CP000253.1 403107 . G A 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 403116 . G A 189.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:218,15,0
CP000253.1 403122 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:4:6:85,6,0
CP000253.1 403123 . A C 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 403125 . A T 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 403128 . C T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 403131 . T C 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 403141 . G A 96.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:124,9,0
CP000253.1 403142 . T C 86.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:114,9,0
CP000253.1 403143 . T G 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 403150 . G A 96.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:124,9,0
CP000253.1 403152 . C T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 403164 . A G 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 403186 . A T 206.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:235,18,0
CP000253.1 403188 . T A 263.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:292,21,0
CP000253.1 403201 . C T 481.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:510,36,0
CP000253.1 403212 . G A 442.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:33:471,33,0
CP000253.1 403224 . G A 479.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:508,36,0
CP000253.1 403254 . T A 620.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:45:649,45,0
CP000253.1 403266 . A T 609.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:638,45,0
CP000253.1 403278 . T C 647.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:27:48:676,48,0
CP000253.1 403296 . A T 663.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=23.71;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:692,48,0
CP000253.1 403602 . C T 188.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:217,15,0
CP000253.1 403611 . T C 2398.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.70;MQ0=0;QD=23.99;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2427,169,0
CP000253.1 403617 . T C 2424.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.70;MQ0=0;QD=24.01;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2453,169,0
CP000253.1 403629 . A G 2414.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.70;MQ0=0;QD=23.91;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2443,169,0
CP000253.1 403632 . G A 2420.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.70;MQ0=0;QD=23.97;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2449,169,0
CP000253.1 403635 . T A 2422.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.70;MQ0=0;QD=23.99;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2451,169,0
CP000253.1 403644 . T G 2431.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.70;MQ0=0;QD=24.08;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2460,169,0
CP000253.1 403668 . A G 3455.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6546;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=23.04;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3484,238,0
CP000253.1 403687 . A T 3407.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,150:151:99:3436,238,0
CP000253.1 403699 . G A 3381.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3410,235,0
CP000253.1 403703 . T C 3363.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3392,235,0
CP000253.1 403728 . A T 3500.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3529,241,0
CP000253.1 403752 . G A 3157.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.334;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.24;ReadPosRankSum=1.113;SOR=0.509 GT:AD:DP:GQ:PL 1/1:3,139:142:99:3186,181,0
CP000253.1 403788 . G A 3010.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3207;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3039,208,0
CP000253.1 403809 . T C 2979.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8694;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3008,208,0
CP000253.1 403821 . T C 2842.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2871,199,0
CP000253.1 403830 . T A 2762.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2791,193,0
CP000253.1 403860 . C T 2088.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2117,147,0
CP000253.1 403866 . C G 1837.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1866,129,0
CP000253.1 403914 . C T 260.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:289,21,0
CP000253.1 403920 . G A 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 403921 . A G 51.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0
CP000253.1 403922 . C A 51.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0
CP000253.1 403925 . A G 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 403926 . T A 52.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0
CP000253.1 403932 . T A 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 403953 . A T 41.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0
CP000253.1 403954 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 403956 . G T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 403960 . T G 51.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0
CP000253.1 403963 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 403965 . A T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 403968 . A C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 403971 . A T 48.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:76,6,0
CP000253.1 403974 . A T 52.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0
CP000253.1 403975 . A G 39.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:67,6,0
CP000253.1 403977 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 403990 . G A 383.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:30:412,30,0
CP000253.1 403995 . C A 370.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.90;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:30:399,30,0
CP000253.1 404004 . C T 327.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.31;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:27:356,27,0
CP000253.1 404008 . A G 368.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:30:397,30,0
CP000253.1 404016 . C T 372.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:30:401,30,0
CP000253.1 404024 . C A 378.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.56;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:30:407,30,0
CP000253.1 404025 . G A 377.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.48;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:30:406,30,0
CP000253.1 404028 . A T 317.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:27:346,27,0
CP000253.1 404030 . G C 300.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:12:24:329,24,0
CP000253.1 404034 . C T 380.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:30:409,30,0
CP000253.1 404038 . G A 372.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:30:401,30,0
CP000253.1 404040 . T C 315.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:27:344,27,0
CP000253.1 404064 . G A 427.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.74;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:33:456,33,0
CP000253.1 404091 . C T 652.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.20;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:48:681,48,0
CP000253.1 404100 . G A 698.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:51:727,51,0
CP000253.1 404130 . G A 735.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:54:764,54,0
CP000253.1 404139 . T C 729.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:54:758,54,0
CP000253.1 404151 . T C 657.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:686,48,0
CP000253.1 404166 . T A 647.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:48:676,48,0
CP000253.1 404224 . T A 651.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.47;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:680,48,0
CP000253.1 404290 . G C 1341.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.53;MQ0=0;QD=23.13;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1370,96,0
CP000253.1 404295 . T A 1357.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.53;MQ0=0;QD=23.41;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1386,96,0
CP000253.1 404303 . T A 1347.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.52;MQ0=0;QD=23.65;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1376,96,0
CP000253.1 404304 . A G 1351.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.52;MQ0=0;QD=23.72;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1380,96,0
CP000253.1 404309 . A C 1352.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.52;MQ0=0;QD=23.73;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1381,96,0
CP000253.1 404313 . T G 1347.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.52;MQ0=0;QD=23.65;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1376,96,0
CP000253.1 404328 . A G 1290.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=23.05;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1319,93,0
CP000253.1 404337 . T A 1260.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.48;MQ0=0;QD=23.79;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1289,90,0
CP000253.1 404343 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 404589 . A G 714.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:743,51,0
CP000253.1 404661 . T C 362.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:391,27,0
CP000253.1 404693 . A C 362.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:16:27:391,27,0
CP000253.1 404694 . G A 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 404695 . G A 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 404700 . A T 403.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:432,30,0
CP000253.1 404770 . T A 1602.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1631,114,0
CP000253.1 404792 . G T 1939.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=64.6618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1968,135,0
CP000253.1 404798 . T C 1948.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=73.5738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1977,138,0
CP000253.1 404861 . T C 2513.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0169;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2542,175,0
CP000253.1 404969 . A G 3367.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3396,232,0
CP000253.1 404975 . A G 3314.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3343,229,0
CP000253.1 405002 . A G 2865.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,126:127:99:2894,199,0
CP000253.1 405083 . A T 2160.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2189,154,0
CP000253.1 405157 . C T 981.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1010,69,0
CP000253.1 405228 . G C 183.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:212,15,0
CP000253.1 405241 . T C 223.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:252,18,0
CP000253.1 405263 . T A 193.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:222,18,0
CP000253.1 405267 . A G 176.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:205,15,0
CP000253.1 405270 . C T 180.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:209,15,0
CP000253.1 405273 . G A 208.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:237,18,0
CP000253.1 405274 . A T 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 405287 . A C 205.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:234,18,0
CP000253.1 405342 . G A 92.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0
CP000253.1 405344 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 405349 . T C 82.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:110,9,0
CP000253.1 405480 . G A 372.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.248;DP=78;Dels=0.00;ExcessHet=3.0103;FS=2.333;HaplotypeScore=6.1260;MLEAC=1;MLEAF=0.500;MQ=59.94;MQ0=0;MQRankSum=0.578;QD=4.78;ReadPosRankSum=8.089;SOR=1.298 GT:AD:DP:GQ:PL 0/1:60,18:78:99:401,0,1300
CP000253.1 405492 . G A 1830.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.686;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.647;HaplotypeScore=50.5249;MLEAC=1;MLEAF=0.500;MQ=58.78;MQ0=0;MQRankSum=3.815;QD=12.63;ReadPosRankSum=10.625;SOR=0.910 GT:AD:DP:GQ:PL 0/1:62,83:145:99:1859,0,1142
CP000253.1 405493 . C T 1256.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.654;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=50.5249;MLEAC=1;MLEAF=0.500;MQ=58.78;MQ0=0;MQRankSum=2.688;QD=8.73;ReadPosRankSum=6.100;SOR=0.753 GT:AD:DP:GQ:PL 0/1:83,61:145:99:1285,0,1715
CP000253.1 405498 . G C 211.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.562;DP=157;Dels=0.00;ExcessHet=3.0103;FS=4.570;HaplotypeScore=74.3882;MLEAC=1;MLEAF=0.500;MQ=58.88;MQ0=0;MQRankSum=1.449;QD=1.37;ReadPosRankSum=6.202;SOR=1.210 GT:AD:DP:GQ:PL 0/1:135,20:157:99:240,0,2927
CP000253.1 405505 . T C 3056.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.945;DP=165;Dels=0.00;ExcessHet=3.0103;FS=3.068;HaplotypeScore=17.8275;MLEAC=1;MLEAF=0.500;MQ=58.93;MQ0=0;MQRankSum=-1.423;QD=18.53;ReadPosRankSum=-6.149;SOR=0.434 GT:AD:DP:GQ:PL 0/1:21,144:165:99:3085,0,294
CP000253.1 405512 . G A 229.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.261;DP=173;Dels=0.00;ExcessHet=3.0103;FS=1.968;HaplotypeScore=19.7512;MLEAC=1;MLEAF=0.500;MQ=58.96;MQ0=0;MQRankSum=1.516;QD=1.33;ReadPosRankSum=5.673;SOR=1.008 GT:AD:DP:GQ:PL 0/1:153,20:173:99:258,0,3310
CP000253.1 405513 . T C 225.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.757;DP=173;Dels=0.00;ExcessHet=3.0103;FS=1.974;HaplotypeScore=19.7512;MLEAC=1;MLEAF=0.500;MQ=58.96;MQ0=0;MQRankSum=1.532;QD=1.33;ReadPosRankSum=5.668;SOR=1.023 GT:AD:DP:GQ:PL 0/1:150,20:173:99:254,0,3260
CP000253.1 405516 . G T 210.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.975;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.902;HaplotypeScore=17.9011;MLEAC=1;MLEAF=0.500;MQ=59.00;MQ0=0;MQRankSum=1.475;QD=1.16;ReadPosRankSum=5.707;SOR=1.014 GT:AD:DP:GQ:PL 0/1:161,20:181:99:239,0,3473
CP000253.1 405520 . T G 220.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.131;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.907;HaplotypeScore=95.3108;MLEAC=1;MLEAF=0.500;MQ=59.00;MQ0=0;MQRankSum=0.779;QD=1.23;ReadPosRankSum=4.901;SOR=0.957 GT:AD:DP:GQ:PL 0/1:158,22:181:99:249,0,3447
CP000253.1 405530 . C T 872.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.355;DP=199;Dels=0.00;ExcessHet=3.0103;FS=1.267;HaplotypeScore=99.9770;MLEAC=1;MLEAF=0.500;MQ=59.09;MQ0=0;MQRankSum=-6.396;QD=4.41;ReadPosRankSum=-0.717;SOR=0.567 GT:AD:DP:GQ:PL 0/1:146,52:199:99:901,0,3103
CP000253.1 405531 . G A 1693.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.277;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=78.3865;MLEAC=1;MLEAF=0.500;MQ=59.09;MQ0=0;MQRankSum=-4.315;QD=8.60;ReadPosRankSum=0.282;SOR=0.785 GT:AD:DP:GQ:PL 0/1:113,84:197:99:1722,0,2267
CP000253.1 405533 . T C 1657.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.999;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.542;HaplotypeScore=76.4991;MLEAC=1;MLEAF=0.500;MQ=59.09;MQ0=0;MQRankSum=-4.325;QD=8.50;ReadPosRankSum=0.362;SOR=0.793 GT:AD:DP:GQ:PL 0/1:112,83:197:99:1686,0,2283
CP000253.1 405534 . A T 1623.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.790;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.533;HaplotypeScore=78.3911;MLEAC=1;MLEAF=0.500;MQ=59.09;MQ0=0;MQRankSum=-4.315;QD=8.24;ReadPosRankSum=0.292;SOR=0.785 GT:AD:DP:GQ:PL 0/1:113,84:197:99:1652,0,2312
CP000253.1 405536 . G A 511.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.388;DP=197;Dels=0.00;ExcessHet=3.0103;FS=2.376;HaplotypeScore=80.3338;MLEAC=1;MLEAF=0.500;MQ=59.09;MQ0=0;MQRankSum=1.284;QD=2.60;ReadPosRankSum=1.042;SOR=0.941 GT:AD:DP:GQ:PL 0/1:162,35:197:99:540,0,3457
CP000253.1 405546 . T G 1748.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.668;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=159.0403;MLEAC=1;MLEAF=0.500;MQ=59.11;MQ0=0;MQRankSum=-4.195;QD=8.61;ReadPosRankSum=0.423;SOR=0.870 GT:AD:DP:GQ:PL 0/1:114,89:203:99:1777,0,2267
CP000253.1 405549 . G A 775.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.715;DP=203;Dels=0.00;ExcessHet=3.0103;FS=1.280;HaplotypeScore=162.2895;MLEAC=1;MLEAF=0.500;MQ=59.11;MQ0=0;MQRankSum=-6.683;QD=3.82;ReadPosRankSum=0.103;SOR=0.561 GT:AD:DP:GQ:PL 0/1:153,50:203:99:804,0,3298
CP000253.1 405550 . C T 1793.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.906;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=162.3870;MLEAC=1;MLEAF=0.500;MQ=59.11;MQ0=0;MQRankSum=-4.242;QD=8.84;ReadPosRankSum=0.298;SOR=0.828 GT:AD:DP:GQ:PL 0/1:115,88:203:99:1822,0,2338
CP000253.1 405551 . G T 626.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.014;DP=205;Dels=0.00;ExcessHet=3.0103;FS=4.338;HaplotypeScore=161.5549;MLEAC=1;MLEAF=0.500;MQ=59.12;MQ0=0;MQRankSum=1.983;QD=3.06;ReadPosRankSum=0.348;SOR=1.130 GT:AD:DP:GQ:PL 0/1:167,38:205:99:655,0,3479
CP000253.1 405552 . A G 811.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.057;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.580;HaplotypeScore=213.1568;MLEAC=1;MLEAF=0.500;MQ=59.23;MQ0=0;MQRankSum=-6.840;QD=3.45;ReadPosRankSum=1.558;SOR=0.601 GT:AD:DP:GQ:PL 0/1:183,52:235:99:840,0,3903
CP000253.1 405557 . A T 1180.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.423;DP=250;Dels=0.00;ExcessHet=3.0103;FS=2.490;HaplotypeScore=154.6954;MLEAC=1;MLEAF=0.500;MQ=59.24;MQ0=0;MQRankSum=2.992;QD=4.76;ReadPosRankSum=-3.318;SOR=0.912 GT:AD:DP:GQ:PL 0/1:183,65:250:99:1209,0,3885
CP000253.1 405566 . C T 714.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.733;DP=250;Dels=0.00;ExcessHet=3.0103;FS=6.283;HaplotypeScore=65.1019;MLEAC=1;MLEAF=0.500;MQ=58.96;MQ0=0;MQRankSum=-5.744;QD=2.91;ReadPosRankSum=4.407;SOR=1.079 GT:AD:DP:GQ:PL 0/1:204,42:250:99:743,0,4758
CP000253.1 405570 . G A 2429.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.120;DP=250;Dels=0.00;ExcessHet=3.0103;FS=4.374;HaplotypeScore=108.2942;MLEAC=1;MLEAF=0.500;MQ=58.82;MQ0=0;MQRankSum=-2.327;QD=9.72;ReadPosRankSum=10.822;SOR=0.906 GT:AD:DP:GQ:PL 0/1:151,99:250:99:2458,0,3210
CP000253.1 405573 . A G 2211.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.245;DP=250;Dels=0.00;ExcessHet=3.0103;FS=1.628;HaplotypeScore=108.6216;MLEAC=1;MLEAF=0.500;MQ=58.65;MQ0=0;MQRankSum=-1.306;QD=8.85;ReadPosRankSum=10.880;SOR=0.891 GT:AD:DP:GQ:PL 0/1:159,91:250:99:2240,0,3512
CP000253.1 405580 . C T 1695.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.353;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=128.2314;MLEAC=1;MLEAF=0.500;MQ=58.20;MQ0=0;MQRankSum=3.609;QD=6.84;ReadPosRankSum=0.809;SOR=0.704 GT:AD:DP:GQ:PL 0/1:161,87:250:99:1724,0,3911
CP000253.1 405589 . A G 1273.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.530;DP=250;Dels=0.00;ExcessHet=3.0103;FS=1.143;HaplotypeScore=120.4199;MLEAC=1;MLEAF=0.500;MQ=57.99;MQ0=0;MQRankSum=2.966;QD=5.10;ReadPosRankSum=8.182;SOR=0.765 GT:AD:DP:GQ:PL 0/1:189,61:250:99:1302,0,4294
CP000253.1 405590 . T C 1730.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.755;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=208.8116;MLEAC=1;MLEAF=0.500;MQ=58.05;MQ0=0;MQRankSum=3.858;QD=6.95;ReadPosRankSum=3.373;SOR=0.716 GT:AD:DP:GQ:PL 0/1:162,87:250:99:1759,0,3786
CP000253.1 405591 . T G 1767.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.828;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=298.3317;MLEAC=1;MLEAF=0.500;MQ=58.05;MQ0=0;MQRankSum=3.788;QD=7.13;ReadPosRankSum=3.642;SOR=0.704 GT:AD:DP:GQ:PL 0/1:161,87:250:99:1796,0,3520
CP000253.1 405593 . A C 895.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.261;DP=249;Dels=0.00;ExcessHet=3.0103;FS=5.022;HaplotypeScore=314.8796;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-0.520;QD=3.60;ReadPosRankSum=9.142;SOR=1.017 GT:AD:DP:GQ:PL 0/1:206,43:249:99:924,0,4634
CP000253.1 405596 . G A 3885.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.751;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=311.4712;MLEAC=1;MLEAF=0.500;MQ=57.93;MQ0=0;MQRankSum=-3.927;QD=15.54;ReadPosRankSum=-3.602;SOR=0.683 GT:AD:DP:GQ:PL 0/1:87,163:250:99:3914,0,1805
CP000253.1 405600 . G A 1156.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=277.6784;MLEAC=1;MLEAF=0.500;MQ=57.93;MQ0=0;MQRankSum=-0.333;QD=4.63;ReadPosRankSum=-8.034;SOR=0.750 GT:AD:DP:GQ:PL 0/1:180,70:250:99:1185,0,4341
CP000253.1 405601 . A C 1162.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.263;DP=250;Dels=0.00;ExcessHet=3.0103;FS=2.431;HaplotypeScore=262.0733;MLEAC=1;MLEAF=0.500;MQ=57.93;MQ0=0;MQRankSum=-0.509;QD=4.65;ReadPosRankSum=-7.933;SOR=0.718 GT:AD:DP:GQ:PL 0/1:183,67:250:99:1191,0,4360
CP000253.1 405608 . C T 625.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.219;DP=250;Dels=0.00;ExcessHet=3.0103;FS=4.740;HaplotypeScore=78.4817;MLEAC=1;MLEAF=0.500;MQ=57.95;MQ0=0;MQRankSum=-3.450;QD=2.51;ReadPosRankSum=4.930;SOR=0.984 GT:AD:DP:GQ:PL 0/1:211,38:250:99:654,0,4832
CP000253.1 405629 . A G 6635.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.641;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5783;MLEAC=2;MLEAF=1.00;MQ=57.70;MQ0=2;MQRankSum=3.303;QD=26.65;ReadPosRankSum=1.604;SOR=0.751 GT:AD:DP:GQ:PL 1/1:2,247:250:99:6664,449,0
CP000253.1 405641 . T C 541.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.318;DP=247;Dels=0.00;ExcessHet=3.0103;FS=4.638;HaplotypeScore=72.5753;MLEAC=1;MLEAF=0.500;MQ=56.85;MQ0=4;MQRankSum=-3.564;QD=2.23;ReadPosRankSum=4.597;SOR=1.271 GT:AD:DP:GQ:PL 0/1:204,39:247:99:570,0,4836
CP000253.1 405647 . T C 2669.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.428;DP=247;Dels=0.00;ExcessHet=3.0103;FS=1.613;HaplotypeScore=82.9986;MLEAC=1;MLEAF=0.500;MQ=57.29;MQ0=4;MQRankSum=5.405;QD=10.81;ReadPosRankSum=2.975;SOR=0.543 GT:AD:DP:GQ:PL 0/1:131,116:247:99:2698,0,2973
CP000253.1 405650 . G A 2952.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.882;DP=250;Dels=0.00;ExcessHet=3.0103;FS=2.942;HaplotypeScore=84.2517;MLEAC=1;MLEAF=0.500;MQ=57.31;MQ0=4;MQRankSum=4.301;QD=11.86;ReadPosRankSum=2.082;SOR=0.506 GT:AD:DP:GQ:PL 0/1:127,122:250:99:2981,0,2902
CP000253.1 405662 . C T 1040.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.276;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=218.3414;MLEAC=1;MLEAF=0.500;MQ=57.34;MQ0=4;MQRankSum=-6.694;QD=4.35;ReadPosRankSum=-4.253;SOR=0.700 GT:AD:DP:GQ:PL 0/1:176,63:250:99:1069,0,4412
CP000253.1 405663 . T C 2346.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.224;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.474;HaplotypeScore=221.2380;MLEAC=1;MLEAF=0.500;MQ=57.41;MQ0=4;MQRankSum=3.775;QD=9.39;ReadPosRankSum=0.749;SOR=0.760 GT:AD:DP:GQ:PL 0/1:145,105:250:99:2375,0,3433
CP000253.1 405668 . C T 4898.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.007;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=214.8912;MLEAC=1;MLEAF=0.500;MQ=57.41;MQ0=4;MQRankSum=5.429;QD=19.67;ReadPosRankSum=3.380;SOR=0.713 GT:AD:DP:GQ:PL 0/1:57,192:250:99:4927,0,1037
CP000253.1 405671 . C T 3937.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.632;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=230.3455;MLEAC=1;MLEAF=0.500;MQ=57.37;MQ0=4;MQRankSum=0.920;QD=16.48;ReadPosRankSum=2.276;SOR=0.665 GT:AD:DP:GQ:PL 0/1:81,158:241:99:3966,0,1716
CP000253.1 405683 . C T 3736.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.960;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=66.8716;MLEAC=1;MLEAF=0.500;MQ=57.55;MQ0=4;MQRankSum=2.559;QD=15.64;ReadPosRankSum=1.121;SOR=0.677 GT:AD:DP:GQ:PL 0/1:84,155:240:99:3765,0,1735
CP000253.1 405686 . A T 1669.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.987;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=67.7911;MLEAC=1;MLEAF=0.500;MQ=57.84;MQ0=4;MQRankSum=-3.426;QD=7.08;ReadPosRankSum=-1.571;SOR=0.712 GT:AD:DP:GQ:PL 0/1:149,87:236:99:1698,0,4032
CP000253.1 405690 . G A 411.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.742;DP=237;Dels=0.00;ExcessHet=3.0103;FS=2.496;HaplotypeScore=86.5833;MLEAC=1;MLEAF=0.500;MQ=57.85;MQ0=4;MQRankSum=-0.906;QD=1.75;ReadPosRankSum=-2.228;SOR=0.588 GT:AD:DP:GQ:PL 0/1:204,31:236:99:440,0,5221
CP000253.1 405699 . A G 54.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.282;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=95.1965;MLEAC=1;MLEAF=0.500;MQ=57.74;MQ0=4;MQRankSum=1.097;QD=0.23;ReadPosRankSum=-3.829;SOR=0.702 GT:AD:DP:GQ:PL 0/1:221,20:241:83:83,0,5833
CP000253.1 405704 . G A 3162.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.090;DP=240;Dels=0.00;ExcessHet=3.0103;FS=1.032;HaplotypeScore=117.0252;MLEAC=1;MLEAF=0.500;MQ=57.73;MQ0=4;MQRankSum=2.274;QD=13.18;ReadPosRankSum=-0.207;SOR=0.569 GT:AD:DP:GQ:PL 0/1:108,132:240:99:3191,0,2663
CP000253.1 405705 . G A 346.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.362;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.747;HaplotypeScore=116.1057;MLEAC=1;MLEAF=0.500;MQ=57.74;MQ0=4;MQRankSum=-0.861;QD=1.44;ReadPosRankSum=-1.355;SOR=0.512 GT:AD:DP:GQ:PL 0/1:211,30:241:99:375,0,5467
CP000253.1 405710 . T C 4740.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.570;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=177.3886;MLEAC=1;MLEAF=0.500;MQ=57.79;MQ0=4;MQRankSum=7.265;QD=19.92;ReadPosRankSum=2.810;SOR=0.734 GT:AD:DP:GQ:PL 0/1:60,178:239:99:4769,0,1026
CP000253.1 405716 . G A 1113.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.857;DP=218;Dels=0.00;ExcessHet=3.0103;FS=1.235;HaplotypeScore=100.7020;MLEAC=1;MLEAF=0.500;MQ=58.52;MQ0=4;MQRankSum=2.623;QD=5.13;ReadPosRankSum=1.009;SOR=0.554 GT:AD:DP:GQ:PL 0/1:159,58:218:99:1142,0,4052
CP000253.1 405718 . T C 465.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.337;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=148.0789;MLEAC=1;MLEAF=0.500;MQ=59.85;MQ0=0;MQRankSum=-5.131;QD=2.62;ReadPosRankSum=-0.226;SOR=0.695 GT:AD:DP:GQ:PL 0/1:150,28:178:99:494,0,3887
CP000253.1 405719 . G A 449.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.559;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=148.0789;MLEAC=1;MLEAF=0.500;MQ=59.85;MQ0=0;MQRankSum=-5.131;QD=2.53;ReadPosRankSum=-0.126;SOR=0.695 GT:AD:DP:GQ:PL 0/1:150,28:178:99:478,0,3929
CP000253.1 405725 . G T 1233.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.924;DP=177;Dels=0.00;ExcessHet=3.0103;FS=1.251;HaplotypeScore=141.8143;MLEAC=1;MLEAF=0.500;MQ=59.85;MQ0=0;MQRankSum=1.908;QD=6.97;ReadPosRankSum=0.109;SOR=0.568 GT:AD:DP:GQ:PL 0/1:118,59:177:99:1262,0,3167
CP000253.1 405728 . A T 1679.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.365;DP=181;Dels=0.00;ExcessHet=3.0103;FS=1.925;HaplotypeScore=120.8028;MLEAC=1;MLEAF=0.500;MQ=59.76;MQ0=0;MQRankSum=1.046;QD=9.33;ReadPosRankSum=1.004;SOR=0.949 GT:AD:DP:GQ:PL 0/1:109,71:181:99:1708,0,2751
CP000253.1 405731 . T C 2578.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.272;DP=176;Dels=0.00;ExcessHet=3.0103;FS=2.660;HaplotypeScore=83.9953;MLEAC=1;MLEAF=0.500;MQ=59.75;MQ0=0;MQRankSum=-1.999;QD=14.74;ReadPosRankSum=0.696;SOR=0.894 GT:AD:DP:GQ:PL 0/1:77,98:176:99:2607,0,1750
CP000253.1 405740 . C T 638.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.545;DP=149;Dels=0.00;ExcessHet=3.0103;FS=2.469;HaplotypeScore=53.2444;MLEAC=1;MLEAF=0.500;MQ=59.71;MQ0=0;MQRankSum=1.745;QD=4.29;ReadPosRankSum=1.739;SOR=0.676 GT:AD:DP:GQ:PL 0/1:113,36:149:99:667,0,3018
CP000253.1 405743 . C T 1370.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.896;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.615;HaplotypeScore=31.5187;MLEAC=1;MLEAF=0.500;MQ=59.71;MQ0=0;MQRankSum=-1.551;QD=9.26;ReadPosRankSum=2.379;SOR=0.627 GT:AD:DP:GQ:PL 0/1:88,60:149:99:1399,0,2275
CP000253.1 405754 . A G 797.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.864;DP=116;Dels=0.00;ExcessHet=3.0103;FS=5.039;HaplotypeScore=70.7259;MLEAC=1;MLEAF=0.500;MQ=59.63;MQ0=0;MQRankSum=0.480;QD=6.88;ReadPosRankSum=-0.265;SOR=1.205 GT:AD:DP:GQ:PL 0/1:81,35:116:99:826,0,2056
CP000253.1 405757 . A C 1330.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.174;DP=87;Dels=0.00;ExcessHet=3.0103;FS=1.870;HaplotypeScore=94.3331;MLEAC=1;MLEAF=0.500;MQ=59.62;MQ0=0;MQRankSum=-1.424;QD=15.30;ReadPosRankSum=0.165;SOR=0.900 GT:AD:DP:GQ:PL 0/1:35,52:87:99:1359,0,769
CP000253.1 405758 . A G 396.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.303;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.925;HaplotypeScore=114.3551;MLEAC=1;MLEAF=0.500;MQ=59.62;MQ0=0;MQRankSum=-0.340;QD=4.56;ReadPosRankSum=-0.601;SOR=0.555 GT:AD:DP:GQ:PL 0/1:65,22:87:99:425,0,1695
CP000253.1 405763 . G T 643.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.800;DP=85;Dels=0.00;ExcessHet=3.0103;FS=3.582;HaplotypeScore=111.9732;MLEAC=1;MLEAF=0.500;MQ=59.61;MQ0=0;MQRankSum=-1.594;QD=10.06;ReadPosRankSum=0.440;SOR=1.118 GT:AD:DP:GQ:PL 0/1:36,28:85:99:672,0,834
CP000253.1 405765 . T C 369.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.159;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=111.0251;MLEAC=1;MLEAF=0.500;MQ=59.61;MQ0=0;MQRankSum=-0.367;QD=4.35;ReadPosRankSum=0.800;SOR=0.659 GT:AD:DP:GQ:PL 0/1:64,21:85:99:398,0,1627
CP000253.1 405767 . G A 1272.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.521;DP=85;Dels=0.00;ExcessHet=3.0103;FS=3.055;HaplotypeScore=110.0255;MLEAC=1;MLEAF=0.500;MQ=59.61;MQ0=0;MQRankSum=-1.467;QD=15.15;ReadPosRankSum=0.772;SOR=0.900 GT:AD:DP:GQ:PL 0/1:35,49:85:99:1301,0,792
CP000253.1 405768 . A G 625.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.467;DP=85;Dels=0.00;ExcessHet=3.0103;FS=3.234;HaplotypeScore=89.0351;MLEAC=1;MLEAF=0.500;MQ=59.61;MQ0=0;MQRankSum=-1.214;QD=7.36;ReadPosRankSum=0.061;SOR=1.158 GT:AD:DP:GQ:PL 0/1:57,28:85:99:654,0,1424
CP000253.1 405769 . G A 650.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.624;DP=85;Dels=0.00;ExcessHet=3.0103;FS=3.099;HaplotypeScore=89.1505;MLEAC=1;MLEAF=0.500;MQ=59.61;MQ0=0;MQRankSum=-1.214;QD=7.66;ReadPosRankSum=0.023;SOR=1.158 GT:AD:DP:GQ:PL 0/1:57,28:85:99:679,0,1412
CP000253.1 405779 . T C 422.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.073;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=44.7402;MLEAC=1;MLEAF=0.500;MQ=59.58;MQ0=0;MQRankSum=-0.299;QD=5.28;ReadPosRankSum=1.472;SOR=0.619 GT:AD:DP:GQ:PL 0/1:59,21:80:99:451,0,1532
CP000253.1 405785 . C T 508.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.590;DP=75;Dels=0.00;ExcessHet=3.0103;FS=3.528;HaplotypeScore=44.7402;MLEAC=1;MLEAF=0.500;MQ=59.55;MQ0=0;MQRankSum=-1.367;QD=6.88;ReadPosRankSum=-0.367;SOR=1.329 GT:AD:DP:GQ:PL 0/1:52,22:75:99:537,0,1323
CP000253.1 405788 . A G 443.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.494;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=44.7402;MLEAC=1;MLEAF=0.500;MQ=59.55;MQ0=0;MQRankSum=-0.211;QD=6.00;ReadPosRankSum=1.668;SOR=0.602 GT:AD:DP:GQ:PL 0/1:53,21:74:99:472,0,1366
CP000253.1 405789 . T A 509.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.765;DP=76;Dels=0.00;ExcessHet=3.0103;FS=5.018;HaplotypeScore=44.7402;MLEAC=1;MLEAF=0.500;MQ=59.56;MQ0=0;MQRankSum=-1.341;QD=6.71;ReadPosRankSum=-0.057;SOR=1.409 GT:AD:DP:GQ:PL 0/1:53,23:76:99:538,0,1305
CP000253.1 405791 . C T 466.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.277;DP=76;Dels=0.00;ExcessHet=3.0103;FS=3.518;HaplotypeScore=24.6466;MLEAC=1;MLEAF=0.500;MQ=59.56;MQ0=0;MQRankSum=-1.341;QD=6.14;ReadPosRankSum=-0.192;SOR=1.409 GT:AD:DP:GQ:PL 0/1:53,23:76:99:495,0,1346
CP000253.1 405794 . A G 538.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.855;DP=63;Dels=0.00;ExcessHet=3.0103;FS=5.153;HaplotypeScore=34.8680;MLEAC=1;MLEAF=0.500;MQ=59.47;MQ0=0;MQRankSum=-1.045;QD=8.55;ReadPosRankSum=-1.229;SOR=1.426 GT:AD:DP:GQ:PL 0/1:40,23:63:99:567,0,1000
CP000253.1 405803 . T C 458.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.759;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.6519;MLEAC=1;MLEAF=0.500;MQ=59.43;MQ0=0;MQRankSum=0.062;QD=7.78;ReadPosRankSum=2.258;SOR=0.586 GT:AD:DP:GQ:PL 0/1:38,21:59:99:487,0,972
CP000253.1 405809 . G A 430.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.074;DP=40;Dels=0.00;ExcessHet=3.0103;FS=8.042;HaplotypeScore=23.7643;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=12.31;ReadPosRankSum=-0.167;SOR=1.626 GT:AD:DP:GQ:PL 0/1:15,20:40:99:459,0,320
CP000253.1 405812 . T G 444.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.042;DP=40;Dels=0.00;ExcessHet=3.0103;FS=7.834;HaplotypeScore=27.7632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=13.08;ReadPosRankSum=-0.937;SOR=1.502 GT:AD:DP:GQ:PL 0/1:15,19:40:99:473,0,339
CP000253.1 405815 . A C 470.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.437;DP=40;Dels=0.00;ExcessHet=3.0103;FS=7.834;HaplotypeScore=27.6587;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=13.85;ReadPosRankSum=-1.042;SOR=1.502 GT:AD:DP:GQ:PL 0/1:15,19:40:99:499,0,341
CP000253.1 405821 . A G 17.84 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.439;DP=38;Dels=0.00;ExcessHet=3.0103;FS=1.941;HaplotypeScore=26.4458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=0.47;ReadPosRankSum=3.501;SOR=0.850 GT:AD:DP:GQ:PL 0/1:33,5:38:46:46,0,855
CP000253.1 405822 . C T 516.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.933;DP=36;Dels=0.00;ExcessHet=3.0103;FS=7.558;HaplotypeScore=27.1798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.225;SOR=1.388 GT:AD:DP:GQ:PL 0/1:15,21:36:99:545,0,311
CP000253.1 405824 . T C 54.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.302;DP=36;Dels=0.00;ExcessHet=3.0103;FS=1.926;HaplotypeScore=22.2949;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=1.52;ReadPosRankSum=3.479;SOR=0.842 GT:AD:DP:GQ:PL 0/1:31,5:36:83:83,0,809
CP000253.1 405827 . T C 46.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.027;DP=35;Dels=0.00;ExcessHet=3.0103;FS=1.926;HaplotypeScore=17.2964;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=1.34;ReadPosRankSum=3.420;SOR=0.868 GT:AD:DP:GQ:PL 0/1:30,5:35:75:75,0,782
CP000253.1 405833 . T C 61.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.303;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=3.43;ReadPosRankSum=2.963;SOR=0.582 GT:AD:DP:GQ:PL 0/1:13,5:18:90:90,0,343
CP000253.1 405835 . A G 97.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.752;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=5.43;ReadPosRankSum=2.963;SOR=0.582 GT:AD:DP:GQ:PL 0/1:13,5:18:99:126,0,343
CP000253.1 405839 . A G 83.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.724;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=5.24;ReadPosRankSum=2.838;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,5:16:99:112,0,301
CP000253.1 405842 . C T 86.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.629;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=5.42;ReadPosRankSum=2.557;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,5:16:99:115,0,301
CP000253.1 405846 . A C 90.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.853;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.48;ReadPosRankSum=2.115;SOR=0.458 GT:AD:DP:GQ:PL 0/1:9,5:14:99:119,0,258
CP000253.1 405847 . A G 58.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.576;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=4.20;ReadPosRankSum=2.115;SOR=0.458 GT:AD:DP:GQ:PL 0/1:9,5:14:87:87,0,262
CP000253.1 405848 . T C 96.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.139;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.91;ReadPosRankSum=2.115;SOR=0.458 GT:AD:DP:GQ:PL 0/1:9,5:14:99:125,0,259
CP000253.1 405853 . G A 92.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.377;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=5.80;ReadPosRankSum=2.384;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,5:16:99:121,0,301
CP000253.1 405854 . C T 100.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.30;ReadPosRankSum=2.386;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,5:16:99:129,0,299
CP000253.1 405860 . C A 102.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.847;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.42;ReadPosRankSum=1.930;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,5:16:99:131,0,263
CP000253.1 405863 . A T 48.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.161;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=3.05;ReadPosRankSum=1.930;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,5:16:77:77,0,304
CP000253.1 405908 . C T 14.91 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.224;DP=21;Dels=0.00;ExcessHet=3.0103;FS=2.570;HaplotypeScore=5.8655;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=0.71;ReadPosRankSum=-1.767;SOR=0.991 GT:AD:DP:GQ:PL 0/1:18,3:21:43:43,0,457
CP000253.1 405917 . T C 263.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.268;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9981;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=11.99;ReadPosRankSum=-1.721;SOR=0.646 GT:AD:DP:GQ:PL 0/1:10,12:22:99:292,0,242
CP000253.1 405920 . A G 221.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.680;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7325;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=9.64;ReadPosRankSum=-1.297;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,12:23:99:250,0,320
CP000253.1 405930 . A C 217.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.632;DP=22;Dels=0.00;ExcessHet=3.0103;FS=1.808;HaplotypeScore=13.9937;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=10.37;ReadPosRankSum=-0.355;SOR=0.327 GT:AD:DP:GQ:PL 0/1:11,10:22:99:246,0,322
CP000253.1 405931 . C T 295.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=15.57;ReadPosRankSum=0.249;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,11:22:99:324,0,203
CP000253.1 405968 . T C 369.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.207;DP=30;Dels=0.00;ExcessHet=3.0103;FS=1.415;HaplotypeScore=4.5973;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=12.33;ReadPosRankSum=-0.271;SOR=0.446 GT:AD:DP:GQ:PL 0/1:14,16:30:99:398,0,349
CP000253.1 405983 . C T 979.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4318;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.99;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,35:36:72:1008,72,0
CP000253.1 406001 . C T 622.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.519;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8644;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=16.39;ReadPosRankSum=-1.295;SOR=0.627 GT:AD:DP:GQ:PL 0/1:10,28:39:99:651,0,221
CP000253.1 406006 . A G 832.28 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.185;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8644;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.90;ReadPosRankSum=-1.342;SOR=0.927 GT:AD:DP:GQ:PL 0/1:2,36:38:9:860,0,9
CP000253.1 406051 . C T 29.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.547;DP=59;Dels=0.00;ExcessHet=3.0103;FS=1.915;HaplotypeScore=15.4871;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=0.51;ReadPosRankSum=0.563;SOR=1.202 GT:AD:DP:GQ:PL 0/1:52,6:59:58:58,0,1258
CP000253.1 406052 . A G 361.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.192;DP=59;Dels=0.00;ExcessHet=3.0103;FS=2.410;HaplotypeScore=15.4871;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-2.649;SOR=0.595 GT:AD:DP:GQ:PL 0/1:42,17:59:99:390,0,967
CP000253.1 406057 . T A 66.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.979;DP=60;Dels=0.00;ExcessHet=3.0103;FS=3.881;HaplotypeScore=17.0877;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=1.13;ReadPosRankSum=0.779;SOR=1.245 GT:AD:DP:GQ:PL 0/1:53,6:60:95:95,0,1243
CP000253.1 406067 . C T 280.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.514;DP=59;Dels=0.00;ExcessHet=3.0103;FS=1.167;HaplotypeScore=10.3875;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=4.84;ReadPosRankSum=-1.218;SOR=0.645 GT:AD:DP:GQ:PL 0/1:43,15:59:99:309,0,1030
CP000253.1 406100 . T C 307.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.926;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7348;MLEAC=1;MLEAF=0.500;MQ=58.18;MQ0=0;MQRankSum=-5.982;QD=3.14;ReadPosRankSum=-1.584;SOR=0.607 GT:AD:DP:GQ:PL 0/1:77,21:99:99:336,0,1786
CP000253.1 406109 . T C 227.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.846;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.871;HaplotypeScore=25.4832;MLEAC=1;MLEAF=0.500;MQ=58.79;MQ0=0;MQRankSum=-8.857;QD=1.46;ReadPosRankSum=1.505;SOR=0.532 GT:AD:DP:GQ:PL 0/1:134,22:156:99:256,0,3070
CP000253.1 406125 . G T 369.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.494;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.770;HaplotypeScore=71.3201;MLEAC=1;MLEAF=0.500;MQ=58.80;MQ0=0;MQRankSum=1.935;QD=2.10;ReadPosRankSum=0.374;SOR=0.604 GT:AD:DP:GQ:PL 0/1:145,31:176:99:398,0,3260
CP000253.1 406127 . A T 238.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.885;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=61.3224;MLEAC=1;MLEAF=0.500;MQ=58.81;MQ0=0;MQRankSum=-10.325;QD=1.34;ReadPosRankSum=1.071;SOR=0.627 GT:AD:DP:GQ:PL 0/1:153,25:178:99:267,0,3417
CP000253.1 406130 . G A 261.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.508;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=61.3224;MLEAC=1;MLEAF=0.500;MQ=58.81;MQ0=0;MQRankSum=-10.008;QD=1.56;ReadPosRankSum=1.087;SOR=0.618 GT:AD:DP:GQ:PL 0/1:143,25:178:99:290,0,3250
CP000253.1 406131 . G A 496.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.218;DP=187;Dels=0.00;ExcessHet=3.0103;FS=1.442;HaplotypeScore=62.2382;MLEAC=1;MLEAF=0.500;MQ=58.87;MQ0=0;MQRankSum=-8.386;QD=2.66;ReadPosRankSum=0.784;SOR=0.569 GT:AD:DP:GQ:PL 0/1:150,37:187:99:525,0,3418
CP000253.1 406154 . T G 392.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.776;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=113.4124;MLEAC=1;MLEAF=0.500;MQ=58.93;MQ0=0;MQRankSum=-8.142;QD=1.97;ReadPosRankSum=1.652;SOR=0.570 GT:AD:DP:GQ:PL 0/1:165,34:200:99:421,0,3689
CP000253.1 406155 . A G 3819.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.349;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=113.4124;MLEAC=1;MLEAF=0.500;MQ=58.93;MQ0=0;MQRankSum=-0.677;QD=19.19;ReadPosRankSum=-0.805;SOR=0.825 GT:AD:DP:GQ:PL 0/1:24,175:200:99:3848,0,247
CP000253.1 406157 . T C 392.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.635;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=143.6068;MLEAC=1;MLEAF=0.500;MQ=58.94;MQ0=0;MQRankSum=-8.366;QD=1.94;ReadPosRankSum=2.155;SOR=0.646 GT:AD:DP:GQ:PL 0/1:169,33:202:99:421,0,3733
CP000253.1 406160 . G A 121.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.925;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=143.4557;MLEAC=1;MLEAF=0.500;MQ=58.95;MQ0=0;MQRankSum=-10.943;QD=0.60;ReadPosRankSum=2.715;SOR=0.693 GT:AD:DP:GQ:PL 0/1:182,21:203:99:150,0,3992
CP000253.1 406166 . A C 386.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.221;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=124.8411;MLEAC=1;MLEAF=0.500;MQ=58.97;MQ0=0;MQRankSum=-8.485;QD=1.87;ReadPosRankSum=2.539;SOR=0.682 GT:AD:DP:GQ:PL 0/1:174,33:207:99:415,0,3805
CP000253.1 406172 . T C 667.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.133;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=78.9951;MLEAC=1;MLEAF=0.500;MQ=58.97;MQ0=0;MQRankSum=-7.847;QD=3.21;ReadPosRankSum=3.457;SOR=0.678 GT:AD:DP:GQ:PL 0/1:165,43:208:99:696,0,3553
CP000253.1 406175 . G T 686.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.091;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=132.9400;MLEAC=1;MLEAF=0.500;MQ=58.99;MQ0=0;MQRankSum=-7.422;QD=3.45;ReadPosRankSum=3.536;SOR=0.684 GT:AD:DP:GQ:PL 0/1:154,45:211:99:715,0,3318
CP000253.1 406178 . T A 633.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.334;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=100.8519;MLEAC=1;MLEAF=0.500;MQ=59.00;MQ0=0;MQRankSum=-7.959;QD=2.98;ReadPosRankSum=3.750;SOR=0.691 GT:AD:DP:GQ:PL 0/1:170,43:213:99:662,0,3627
CP000253.1 406179 . T G 178.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.302;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=101.7988;MLEAC=1;MLEAF=0.500;MQ=59.00;MQ0=0;MQRankSum=0.502;QD=0.84;ReadPosRankSum=1.839;SOR=0.643 GT:AD:DP:GQ:PL 0/1:191,22:213:99:207,0,4106
CP000253.1 406183 . A G 461.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.897;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=109.4593;MLEAC=1;MLEAF=0.500;MQ=59.00;MQ0=0;MQRankSum=1.033;QD=2.17;ReadPosRankSum=2.194;SOR=0.661 GT:AD:DP:GQ:PL 0/1:179,34:214:99:490,0,3836
CP000253.1 406184 . A G 111.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.268;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=107.8313;MLEAC=1;MLEAF=0.500;MQ=59.00;MQ0=0;MQRankSum=0.497;QD=0.52;ReadPosRankSum=2.068;SOR=0.653 GT:AD:DP:GQ:PL 0/1:192,22:214:99:140,0,4124
CP000253.1 406190 . G A 937.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.166;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=71.0663;MLEAC=1;MLEAF=0.500;MQ=59.02;MQ0=0;MQRankSum=-6.865;QD=4.32;ReadPosRankSum=4.256;SOR=0.704 GT:AD:DP:GQ:PL 0/1:162,55:217:99:966,0,3415
CP000253.1 406196 . T A 60.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.704;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=61.7555;MLEAC=1;MLEAF=0.500;MQ=59.07;MQ0=0;MQRankSum=-11.038;QD=0.28;ReadPosRankSum=4.864;SOR=0.793 GT:AD:DP:GQ:PL 0/1:200,19:220:89:89,0,4344
CP000253.1 406199 . C T 171.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.595;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=61.7281;MLEAC=1;MLEAF=0.500;MQ=59.09;MQ0=0;MQRankSum=0.300;QD=0.77;ReadPosRankSum=2.648;SOR=0.683 GT:AD:DP:GQ:PL 0/1:201,22:223:99:200,0,4233
CP000253.1 406205 . A G 178.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.518;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.5203;MLEAC=1;MLEAF=0.500;MQ=59.08;MQ0=0;MQRankSum=0.305;QD=0.81;ReadPosRankSum=2.158;SOR=0.693 GT:AD:DP:GQ:PL 0/1:200,22:222:99:207,0,4238
CP000253.1 406209 . G C 165.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.365;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8518;MLEAC=1;MLEAF=0.500;MQ=59.03;MQ0=0;MQRankSum=0.374;QD=0.79;ReadPosRankSum=1.551;SOR=0.683 GT:AD:DP:GQ:PL 0/1:187,22:210:99:194,0,4000
CP000253.1 406213 . G A 4412.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1964;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=22.98;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,192:192:99:4441,304,0
CP000253.1 406217 . A T 226.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.194;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=1;MLEAF=0.500;MQ=59.92;MQ0=0;MQRankSum=-2.763;QD=1.18;ReadPosRankSum=1.839;SOR=0.670 GT:AD:DP:GQ:PL 0/1:170,22:192:99:255,0,3572
CP000253.1 406221 . G C 228.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.889;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0908;MLEAC=1;MLEAF=0.500;MQ=59.92;MQ0=0;MQRankSum=-2.755;QD=1.20;ReadPosRankSum=1.391;SOR=0.659 GT:AD:DP:GQ:PL 0/1:169,22:191:99:257,0,3582
CP000253.1 406226 . G A 231.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.376;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9135;MLEAC=1;MLEAF=0.500;MQ=59.92;MQ0=0;MQRankSum=-2.755;QD=1.21;ReadPosRankSum=0.915;SOR=0.659 GT:AD:DP:GQ:PL 0/1:169,22:191:99:260,0,3578
CP000253.1 406244 . G A 3344.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.437;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8085;MLEAC=1;MLEAF=0.500;MQ=59.92;MQ0=0;MQRankSum=2.705;QD=18.48;ReadPosRankSum=1.451;SOR=0.731 GT:AD:DP:GQ:PL 0/1:22,159:181:99:3373,0,271
CP000253.1 406245 . A G 247.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.276;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8085;MLEAC=1;MLEAF=0.500;MQ=59.92;MQ0=0;MQRankSum=-2.671;QD=1.37;ReadPosRankSum=-1.581;SOR=0.657 GT:AD:DP:GQ:PL 0/1:159,22:181:99:276,0,3388
CP000253.1 406249 . T A 252.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.454;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1262;MLEAC=1;MLEAF=0.500;MQ=59.91;MQ0=0;MQRankSum=-2.620;QD=1.44;ReadPosRankSum=-2.193;SOR=0.655 GT:AD:DP:GQ:PL 0/1:153,22:177:99:281,0,3255
CP000253.1 406256 . G A 252.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.273;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6505;MLEAC=1;MLEAF=0.500;MQ=59.91;MQ0=0;MQRankSum=-2.637;QD=1.43;ReadPosRankSum=-2.689;SOR=0.656 GT:AD:DP:GQ:PL 0/1:155,22:177:99:281,0,3270
CP000253.1 406265 . A G 4162.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6175;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=23.00;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4191,289,0
CP000253.1 406334 . T A 3513.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1315;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3542,244,0
CP000253.1 406338 . T C 3391.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3420,238,0
CP000253.1 406355 . C T 3316.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3345,232,0
CP000253.1 406360 . T C 3318.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=89.0652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3347,232,0
CP000253.1 406361 . T A 3337.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=91.8441;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3366,232,0
CP000253.1 406377 . G A 2300.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2329,163,0
CP000253.1 406378 . A G 2287.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2316,163,0
CP000253.1 406388 . C T 2490.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.57;MQ0=0;QD=25.42;SOR=1.122 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2519,178,0
CP000253.1 406390 . T C 2476.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=59.57;MQ0=0;QD=25.53;SOR=1.099 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2505,175,0
CP000253.1 406397 . T C 2328.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.485;DP=133;Dels=0.00;ExcessHet=3.0103;FS=4.930;HaplotypeScore=32.0469;MLEAC=1;MLEAF=0.500;MQ=54.32;MQ0=0;MQRankSum=10.709;QD=17.51;ReadPosRankSum=8.239;SOR=1.076 GT:AD:DP:GQ:PL 0/1:33,100:133:99:2357,0,258
CP000253.1 406400 . A C 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.350;DP=133;Dels=0.00;ExcessHet=3.0103;FS=2.780;HaplotypeScore=44.9504;MLEAC=1;MLEAF=0.500;MQ=54.32;MQ0=0;MQRankSum=-6.204;QD=0.08;ReadPosRankSum=-4.516;SOR=0.736 GT:AD:DP:GQ:PL 0/1:117,16:133:39:39,0,2641
CP000253.1 406415 . C T 27.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.415;DP=130;Dels=0.00;ExcessHet=3.0103;FS=1.211;HaplotypeScore=57.2063;MLEAC=1;MLEAF=0.500;MQ=52.05;MQ0=3;MQRankSum=-5.674;QD=0.22;ReadPosRankSum=-4.915;SOR=0.392 GT:AD:DP:GQ:PL 0/1:111,18:130:56:56,0,2446
CP000253.1 406424 . C T 1987.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.716;DP=129;Dels=0.00;ExcessHet=3.0103;FS=2.464;HaplotypeScore=30.5133;MLEAC=1;MLEAF=0.500;MQ=51.46;MQ0=3;MQRankSum=10.161;QD=15.53;ReadPosRankSum=4.489;SOR=0.994 GT:AD:DP:GQ:PL 0/1:45,83:129:99:2016,0,431
CP000253.1 406434 . A T 652.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.050;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3017;MLEAC=1;MLEAF=0.500;MQ=45.01;MQ0=3;MQRankSum=6.834;QD=8.48;ReadPosRankSum=6.851;SOR=0.693 GT:AD:DP:GQ:PL 0/1:45,32:78:99:681,0,470
CP000253.1 406436 . G T 622.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.154;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.894;HaplotypeScore=3.6737;MLEAC=1;MLEAF=0.500;MQ=44.78;MQ0=3;MQRankSum=6.787;QD=8.09;ReadPosRankSum=7.098;SOR=0.639 GT:AD:DP:GQ:PL 0/1:46,31:77:99:651,0,506
CP000253.1 406442 . T C 653.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.015;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5342;MLEAC=1;MLEAF=0.500;MQ=45.29;MQ0=3;MQRankSum=6.898;QD=8.83;ReadPosRankSum=6.727;SOR=0.557 GT:AD:DP:GQ:PL 0/1:42,32:74:99:682,0,523
CP000253.1 406444 . T A 675.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.378;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5426;MLEAC=1;MLEAF=0.500;MQ=46.60;MQ0=3;MQRankSum=6.607;QD=10.73;ReadPosRankSum=6.119;SOR=0.693 GT:AD:DP:GQ:PL 0/1:31,32:63:99:704,0,268
CP000253.1 406445 . C G 1133.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5426;MLEAC=2;MLEAF=1.00;MQ=47.62;MQ0=3;QD=18.90;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,60:60:81:1162,81,0
CP000253.1 406448 . C T 707.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.212;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5433;MLEAC=1;MLEAF=0.500;MQ=49.24;MQ0=3;MQRankSum=5.750;QD=13.11;ReadPosRankSum=5.095;SOR=0.752 GT:AD:DP:GQ:PL 0/1:18,36:54:99:736,0,152
CP000253.1 406453 . T C 682.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.730;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5433;MLEAC=1;MLEAF=0.500;MQ=48.34;MQ0=3;MQRankSum=6.294;QD=11.98;ReadPosRankSum=5.890;SOR=0.693 GT:AD:DP:GQ:PL 0/1:25,32:57:99:711,0,236
CP000253.1 406455 . A G 622.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.000;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6492;MLEAC=1;MLEAF=0.500;MQ=48.34;MQ0=3;MQRankSum=6.294;QD=10.93;ReadPosRankSum=5.890;SOR=0.693 GT:AD:DP:GQ:PL 0/1:25,32:57:99:651,0,239
CP000253.1 406457 . G A 672.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.010;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8248;MLEAC=1;MLEAF=0.500;MQ=48.34;MQ0=3;MQRankSum=6.294;QD=11.80;ReadPosRankSum=5.885;SOR=0.693 GT:AD:DP:GQ:PL 0/1:22,35:57:99:701,0,236
CP000253.1 406463 . C A 681.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.100;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7148;MLEAC=1;MLEAF=0.500;MQ=48.78;MQ0=3;MQRankSum=5.939;QD=11.75;ReadPosRankSum=6.115;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,32:59:99:710,0,263
CP000253.1 406466 . G A 681.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.157;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6784;MLEAC=1;MLEAF=0.500;MQ=48.78;MQ0=3;MQRankSum=5.939;QD=11.56;ReadPosRankSum=5.712;SOR=0.693 GT:AD:DP:GQ:PL 0/1:27,32:59:99:710,0,278
CP000253.1 406467 . G A 22.79 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.217;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6784;MLEAC=1;MLEAF=0.500;MQ=49.27;MQ0=3;MQRankSum=-1.310;QD=0.36;ReadPosRankSum=-3.393;SOR=0.693 GT:AD:DP:GQ:PL 0/1:57,6:63:51:51,0,976
CP000253.1 406469 . T G 663.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.117;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.5305;MLEAC=1;MLEAF=0.500;MQ=49.98;MQ0=3;MQRankSum=5.558;QD=9.91;ReadPosRankSum=6.311;SOR=0.693 GT:AD:DP:GQ:PL 0/1:35,32:67:99:692,0,438
CP000253.1 406470 . T C 186.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.475;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=50.5079;MLEAC=1;MLEAF=0.500;MQ=50.59;MQ0=3;MQRankSum=0.747;QD=2.63;ReadPosRankSum=-5.368;SOR=0.693 GT:AD:DP:GQ:PL 0/1:57,14:71:99:215,0,993
CP000253.1 406472 . A T 617.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.693;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=50.5079;MLEAC=1;MLEAF=0.500;MQ=50.59;MQ0=3;MQRankSum=5.114;QD=8.70;ReadPosRankSum=6.561;SOR=0.693 GT:AD:DP:GQ:PL 0/1:39,32:71:99:646,0,532
CP000253.1 406475 . C T 968.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.490;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=50.5079;MLEAC=1;MLEAF=0.500;MQ=50.78;MQ0=3;MQRankSum=6.157;QD=13.27;ReadPosRankSum=2.718;SOR=0.693 GT:AD:DP:GQ:PL 0/1:27,46:73:99:997,0,246
CP000253.1 406478 . C T 1000.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.088;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=49.4044;MLEAC=1;MLEAF=0.500;MQ=51.15;MQ0=3;MQRankSum=-1.002;QD=13.52;ReadPosRankSum=5.020;SOR=0.729 GT:AD:DP:GQ:PL 0/1:18,56:75:99:1029,0,254
CP000253.1 406490 . T C 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.557;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4325;MLEAC=1;MLEAF=0.500;MQ=54.14;MQ0=3;MQRankSum=-6.362;QD=0.12;ReadPosRankSum=1.460;SOR=0.642 GT:AD:DP:GQ:PL 0/1:77,12:89:39:39,0,1562
CP000253.1 406491 . C A 948.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.445;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4325;MLEAC=1;MLEAF=0.500;MQ=54.14;MQ0=3;MQRankSum=5.374;QD=10.66;ReadPosRankSum=2.560;SOR=0.776 GT:AD:DP:GQ:PL 0/1:41,48:89:99:977,0,633
CP000253.1 406493 . A T 469.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.781;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4325;MLEAC=1;MLEAF=0.500;MQ=54.14;MQ0=3;MQRankSum=-4.018;QD=5.28;ReadPosRankSum=-1.785;SOR=0.624 GT:AD:DP:GQ:PL 0/1:57,32:89:99:498,0,1107
CP000253.1 406499 . C A 1086.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.727;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4302;MLEAC=1;MLEAF=0.500;MQ=54.14;MQ0=3;MQRankSum=3.983;QD=12.35;ReadPosRankSum=1.557;SOR=0.730 GT:AD:DP:GQ:PL 0/1:34,54:89:99:1115,0,494
CP000253.1 406506 . A G 981.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.477;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8919;MLEAC=1;MLEAF=0.500;MQ=54.27;MQ0=3;MQRankSum=5.484;QD=10.79;ReadPosRankSum=1.296;SOR=0.773 GT:AD:DP:GQ:PL 0/1:41,50:91:99:1010,0,630
CP000253.1 406513 . A G 305.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.562;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.24;MQ0=2;MQRankSum=-2.295;QD=4.13;ReadPosRankSum=-1.637;SOR=0.622 GT:AD:DP:GQ:PL 0/1:52,22:74:99:334,0,1082
CP000253.1 406523 . T G 1744.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=58.16;MQ0=0;QD=22.66;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1773,120,0
CP000253.1 406583 . A G 1365.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:96:1394,96,0
CP000253.1 406593 . T A 1373.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:60:96:1402,96,0
CP000253.1 406629 . C A 992.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.58;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:69:1021,69,0
CP000253.1 406691 . A G 544.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:25:39:573,39,0
CP000253.1 406734 . C T 309.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:338,24,0
CP000253.1 406739 . C T 275.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.22;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:304,21,0
CP000253.1 406745 . C T 270.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:299,21,0
CP000253.1 406766 . C T 177.41 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.334;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6611;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=14.78;ReadPosRankSum=0.000;SOR=0.477 GT:AD:DP:GQ:PL 0/1:1,11:12:8:205,0,8
CP000253.1 406778 . C A 320.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5416;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:349,24,0
CP000253.1 406859 . T A 504.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.19;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:36:533,36,0
CP000253.1 406869 . A C 548.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8741;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.32;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:39:577,39,0
CP000253.1 406895 . C T 630.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:659,45,0
CP000253.1 406901 . T A 401.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:21:30:430,30,0
CP000253.1 406904 . A G 412.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.66;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:30:441,30,0
CP000253.1 406911 . A C 419.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.99;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:30:448,30,0
CP000253.1 406913 . G T 419.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.99;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:30:448,30,0
CP000253.1 407019 . A G 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 407027 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 407058 . A G 97.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:125,9,0
CP000253.1 407088 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 407097 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 407100 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 407111 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 407220 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 407252 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 407353 . T A 406.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8874;MLEAC=2;MLEAF=1.00;MQ=57.54;MQ0=0;QD=21.41;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:435,30,0
CP000253.1 407368 . G A 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.54;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 407370 . A C 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.54;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 407372 . C A 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.54;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 407374 . A T 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.54;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 407377 . G A 452.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.66;MQ0=0;QD=22.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:481,33,0
CP000253.1 407399 . G A 939.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.152;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.562;HaplotypeScore=157.9332;MLEAC=1;MLEAF=0.500;MQ=52.22;MQ0=1;MQRankSum=-7.910;QD=4.00;ReadPosRankSum=4.379;SOR=0.604 GT:AD:DP:GQ:PL 0/1:170,65:235:99:968,0,3518
CP000253.1 407400 . A C 2641.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.763;DP=235;Dels=0.00;ExcessHet=3.0103;FS=1.607;HaplotypeScore=157.9332;MLEAC=1;MLEAF=0.500;MQ=52.22;MQ0=1;MQRankSum=-8.206;QD=11.24;ReadPosRankSum=-7.945;SOR=0.812 GT:AD:DP:GQ:PL 0/1:94,141:235:99:2670,0,1735
CP000253.1 407402 . C A 92.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.630;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.856;HaplotypeScore=158.9610;MLEAC=1;MLEAF=0.500;MQ=51.91;MQ0=1;MQRankSum=3.878;QD=0.39;ReadPosRankSum=8.285;SOR=0.735 GT:AD:DP:GQ:PL 0/1:217,21:239:99:121,0,4455
CP000253.1 407407 . C T 1417.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.181;DP=248;Dels=0.00;ExcessHet=3.0103;FS=1.663;HaplotypeScore=184.2361;MLEAC=1;MLEAF=0.500;MQ=51.55;MQ0=1;MQRankSum=-0.564;QD=5.79;ReadPosRankSum=-10.789;SOR=0.814 GT:AD:DP:GQ:PL 0/1:166,79:248:99:1446,0,3157
CP000253.1 407416 . T C 2686.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.033;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.993;HaplotypeScore=43.0749;MLEAC=1;MLEAF=0.500;MQ=51.19;MQ0=1;MQRankSum=-0.905;QD=10.79;ReadPosRankSum=7.914;SOR=0.611 GT:AD:DP:GQ:PL 0/1:99,150:249:99:2715,0,1931
CP000253.1 407420 . G T 1514.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.234;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=39.1591;MLEAC=1;MLEAF=0.500;MQ=51.12;MQ0=1;MQRankSum=-0.018;QD=6.11;ReadPosRankSum=-9.758;SOR=0.610 GT:AD:DP:GQ:PL 0/1:160,88:249:99:1543,0,3083
CP000253.1 407449 . G A 1087.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.750;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.509;HaplotypeScore=169.0959;MLEAC=1;MLEAF=0.500;MQ=51.02;MQ0=1;MQRankSum=-7.918;QD=4.49;ReadPosRankSum=2.185;SOR=0.674 GT:AD:DP:GQ:PL 0/1:166,76:244:99:1116,0,3559
CP000253.1 407455 . C T 947.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.543;DP=245;Dels=0.00;ExcessHet=3.0103;FS=1.111;HaplotypeScore=194.8196;MLEAC=1;MLEAF=0.500;MQ=51.02;MQ0=1;MQRankSum=-6.621;QD=3.88;ReadPosRankSum=4.313;SOR=0.723 GT:AD:DP:GQ:PL 0/1:177,67:245:99:976,0,3655
CP000253.1 407459 . G A 1513.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.286;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.498;HaplotypeScore=184.6196;MLEAC=1;MLEAF=0.500;MQ=50.98;MQ0=1;MQRankSum=-1.082;QD=6.26;ReadPosRankSum=-7.456;SOR=0.768 GT:AD:DP:GQ:PL 0/1:161,81:244:99:1542,0,3226
CP000253.1 407462 . T C 1720.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.662;DP=240;Dels=0.00;ExcessHet=3.0103;FS=1.707;HaplotypeScore=163.6189;MLEAC=1;MLEAF=0.500;MQ=51.23;MQ0=1;MQRankSum=-0.846;QD=7.17;ReadPosRankSum=-7.377;SOR=0.825 GT:AD:DP:GQ:PL 0/1:148,92:240:99:1749,0,2776
CP000253.1 407467 . C T 1743.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.554;DP=242;Dels=0.00;ExcessHet=3.0103;FS=3.095;HaplotypeScore=102.9699;MLEAC=1;MLEAF=0.500;MQ=51.31;MQ0=1;MQRankSum=-0.906;QD=7.24;ReadPosRankSum=-6.871;SOR=0.801 GT:AD:DP:GQ:PL 0/1:150,91:242:99:1772,0,2883
CP000253.1 407470 . C T 765.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.215;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=101.1779;MLEAC=1;MLEAF=0.500;MQ=51.37;MQ0=1;MQRankSum=-7.513;QD=3.32;ReadPosRankSum=3.143;SOR=0.741 GT:AD:DP:GQ:PL 0/1:172,59:236:99:794,0,3753
CP000253.1 407483 . C A 1439.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.827;DP=227;Dels=0.00;ExcessHet=3.0103;FS=1.757;HaplotypeScore=152.3756;MLEAC=1;MLEAF=0.500;MQ=51.17;MQ0=1;MQRankSum=9.053;QD=6.34;ReadPosRankSum=3.615;SOR=0.669 GT:AD:DP:GQ:PL 0/1:150,77:227:99:1468,0,2959
CP000253.1 407485 . A T 1518.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.590;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=149.5980;MLEAC=1;MLEAF=0.500;MQ=51.17;MQ0=1;MQRankSum=-1.573;QD=6.72;ReadPosRankSum=-3.980;SOR=0.778 GT:AD:DP:GQ:PL 0/1:144,82:227:99:1547,0,2844
CP000253.1 407491 . T C 1790.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.350;DP=202;Dels=0.00;ExcessHet=3.0103;FS=1.276;HaplotypeScore=116.9758;MLEAC=1;MLEAF=0.500;MQ=51.41;MQ0=1;MQRankSum=-9.201;QD=11.55;ReadPosRankSum=-4.866;SOR=0.656 GT:AD:DP:GQ:PL 0/1:65,90:202:99:1819,0,1276
CP000253.1 407494 . G A 4563.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=82.0543;MLEAC=2;MLEAF=1.00;MQ=51.41;MQ0=1;QD=22.59;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,202:202:99:4592,319,0
CP000253.1 407503 . A G 1359.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.195;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.600;HaplotypeScore=14.4655;MLEAC=1;MLEAF=0.500;MQ=54.33;MQ0=0;MQRankSum=9.375;QD=8.55;ReadPosRankSum=5.094;SOR=0.693 GT:AD:DP:GQ:PL 0/1:91,68:160:99:1388,0,1829
CP000253.1 407506 . C T 1666.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.275;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.614;HaplotypeScore=12.7830;MLEAC=1;MLEAF=0.500;MQ=54.66;MQ0=0;MQRankSum=-9.390;QD=11.04;ReadPosRankSum=-3.965;SOR=0.718 GT:AD:DP:GQ:PL 0/1:70,81:152:99:1695,0,1348
CP000253.1 407512 . A G 1341.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.733;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.606;HaplotypeScore=14.6774;MLEAC=1;MLEAF=0.500;MQ=54.64;MQ0=0;MQRankSum=9.781;QD=8.89;ReadPosRankSum=3.293;SOR=0.688 GT:AD:DP:GQ:PL 0/1:83,68:151:99:1370,0,1752
CP000253.1 407515 . T G 1538.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.241;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7871;MLEAC=2;MLEAF=1.00;MQ=58.72;MQ0=0;MQRankSum=4.907;QD=21.37;ReadPosRankSum=2.151;SOR=0.423 GT:AD:DP:GQ:PL 1/1:3,69:72:50:1567,50,0
CP000253.1 407518 . G T 1549.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.833;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6145;MLEAC=2;MLEAF=1.00;MQ=59.04;MQ0=0;MQRankSum=-0.257;QD=22.46;ReadPosRankSum=1.858;SOR=0.273 GT:AD:DP:GQ:PL 1/1:1,68:70:75:1578,75,0
CP000253.1 407525 . A T 1495.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.022;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3523;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;MQRankSum=-0.222;QD=21.37;ReadPosRankSum=1.813;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,69:70:74:1524,74,0
CP000253.1 407530 . T C 1560.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2757;MLEAC=2;MLEAF=1.00;MQ=59.19;MQ0=0;QD=22.62;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1589,108,0
CP000253.1 407534 . G A 1580.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2482;MLEAC=2;MLEAF=1.00;MQ=59.19;MQ0=0;QD=23.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1609,111,0
CP000253.1 407557 . A G 1296.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6000;MLEAC=2;MLEAF=1.00;MQ=59.49;MQ0=0;QD=22.75;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1325,93,0
CP000253.1 407560 . A T 1331.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6000;MLEAC=2;MLEAF=1.00;MQ=59.49;MQ0=0;QD=23.36;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1360,93,0
CP000253.1 407562 . T A 1322.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6000;MLEAC=2;MLEAF=1.00;MQ=59.49;MQ0=0;QD=23.21;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1351,93,0
CP000253.1 407564 . T A 1335.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6000;MLEAC=2;MLEAF=1.00;MQ=59.50;MQ0=0;MQRankSum=-0.156;QD=23.03;ReadPosRankSum=-0.777;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,57:58:93:1364,93,0
CP000253.1 407572 . T C 1294.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.50;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1323,93,0
CP000253.1 407584 . G T 1304.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3113;MLEAC=2;MLEAF=1.00;MQ=59.48;MQ0=0;QD=23.30;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1333,93,0
CP000253.1 407593 . T A 706.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.09;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:51:735,51,0
CP000253.1 407639 . G A 146.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:174,12,0
CP000253.1 407665 . T G 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 407680 . T C 153.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;DP=10;Dels=0.00;ExcessHet=3.0103;FS=3.310;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.95;MQ0=0;MQRankSum=2.287;QD=15.38;ReadPosRankSum=2.287;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,8:10:59:182,0,59
CP000253.1 407690 . C T 30.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;DP=10;Dels=0.00;ExcessHet=3.0103;FS=3.310;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.95;MQ0=0;MQRankSum=-2.287;QD=3.08;ReadPosRankSum=-2.287;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,2:10:59:59,0,190
CP000253.1 407692 . A T 259.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.95;MQ0=0;QD=25.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:288,21,0
CP000253.1 407698 . T C 29.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.980;DP=11;Dels=0.00;ExcessHet=3.0103;FS=3.090;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.14;MQ0=0;MQRankSum=-2.362;QD=2.71;ReadPosRankSum=-0.660;SOR=1.981 GT:AD:DP:GQ:PL 0/1:9,2:11:58:58,0,198
CP000253.1 407707 . T A 27.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.560;DP=13;Dels=0.00;ExcessHet=3.0103;FS=3.123;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.43;MQ0=0;MQRankSum=-3.295;QD=2.14;ReadPosRankSum=0.693;SOR=2.030 GT:AD:DP:GQ:PL 0/1:11,2:13:56:56,0,240
CP000253.1 407708 . G A 211.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.619;DP=13;Dels=0.00;ExcessHet=3.0103;FS=3.123;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.43;MQ0=0;MQRankSum=3.609;QD=16.29;ReadPosRankSum=-0.496;SOR=0.141 GT:AD:DP:GQ:PL 0/1:2,11:13:56:240,0,56
CP000253.1 407713 . T A 27.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.739;DP=13;Dels=0.00;ExcessHet=3.0103;FS=3.090;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=58.43;MQ0=0;MQRankSum=-3.295;QD=2.14;ReadPosRankSum=0.693;SOR=2.030 GT:AD:DP:GQ:PL 0/1:11,2:13:56:56,0,231
CP000253.1 407719 . T C 27.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.557;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=58.43;MQ0=0;MQRankSum=-3.295;QD=2.14;ReadPosRankSum=0.693;SOR=2.030 GT:AD:DP:GQ:PL 0/1:11,2:13:56:56,0,223
CP000253.1 407722 . T A 27.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.896;DP=12;Dels=0.00;ExcessHet=3.0103;FS=3.282;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=58.29;MQ0=0;MQRankSum=-3.138;QD=2.31;ReadPosRankSum=0.539;SOR=2.303 GT:AD:DP:GQ:PL 0/1:10,2:12:56:56,0,231
CP000253.1 407731 . C T 27.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.231;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.14;MQ0=0;MQRankSum=-2.362;QD=2.52;ReadPosRankSum=0.230;SOR=1.981 GT:AD:DP:GQ:PL 0/1:9,2:11:56:56,0,225
CP000253.1 407732 . A G 300.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.14;MQ0=0;QD=27.34;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:329,24,0
CP000253.1 407737 . A T 21.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.623;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.95;MQ0=0;MQRankSum=-2.287;QD=2.18;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:8,2:10:50:50,0,207
CP000253.1 407782 . T C 244.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;QD=24.48;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:273,21,0
CP000253.1 407817 . A G 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 407836 . C T 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 407845 . C A 174.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:203,15,0
CP000253.1 407855 . C G 262.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.86;MQ0=0;QD=21.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:291,21,0
CP000253.1 407857 . A G 42.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.823;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.21;MQ0=0;MQRankSum=-2.823;QD=4.28;ReadPosRankSum=-1.803;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,4:10:71:71,0,151
CP000253.1 407860 . T C 228.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.21;MQ0=0;QD=22.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:257,18,0
CP000253.1 407864 . A T 86.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.981;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=55.78;MQ0=0;MQRankSum=2.655;QD=9.64;ReadPosRankSum=2.655;SOR=1.022 GT:AD:DP:GQ:PL 0/1:4,5:9:74:115,0,74
CP000253.1 407865 . T G 41.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.264;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=55.78;MQ0=0;MQRankSum=-2.655;QD=4.64;ReadPosRankSum=-2.655;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,4:9:70:70,0,113
CP000253.1 407869 . C T 227.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.28;MQ0=0;QD=20.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:256,18,0
CP000253.1 407879 . A G 331.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.634;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=55.11;MQ0=0;MQRankSum=-4.005;QD=13.82;ReadPosRankSum=-0.536;SOR=0.582 GT:AD:DP:GQ:PL 0/1:7,17:24:99:360,0,136
CP000253.1 407880 . A C,G 547.77 . AC=1,1;AF=0.500,0.500;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=55.50;MQ0=0;QD=21.07;SOR=0.846 GT:AD:DP:GQ:PL 1/2:0,7,19:26:99:576,413,401,163,0,133
CP000253.1 407902 . A T 57.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.037;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=55.32;MQ0=0;MQRankSum=3.116;QD=2.31;ReadPosRankSum=1.175;SOR=1.022 GT:AD:DP:GQ:PL 0/1:20,5:25:86:86,0,409
CP000253.1 407904 . T A 375.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.206;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=55.32;MQ0=0;MQRankSum=-3.044;QD=15.03;ReadPosRankSum=-1.104;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,20:25:90:404,0,90
CP000253.1 407905 . T G 375.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.689;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=55.32;MQ0=0;MQRankSum=-3.044;QD=15.03;ReadPosRankSum=-1.104;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,20:25:90:404,0,90
CP000253.1 407908 . T C 370.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.445;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=55.32;MQ0=0;MQRankSum=-3.044;QD=14.83;ReadPosRankSum=-1.104;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,20:25:91:399,0,91
CP000253.1 407920 . T G 93.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:121,9,0
CP000253.1 407923 . T A 95.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:123,9,0
CP000253.1 407926 . C G 100.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:128,9,0
CP000253.1 407927 . T G 95.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:123,9,0
CP000253.1 407934 . A T 93.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:5:9:121,9,0
CP000253.1 407935 . T A 95.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:123,9,0
CP000253.1 407936 . C T 100.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:128,9,0
CP000253.1 407941 . A G 86.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:114,9,0
CP000253.1 407945 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 407971 . C T 179.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:208,15,0
CP000253.1 407977 . A T 226.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:255,18,0
CP000253.1 407983 . T C 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 408012 . A T 224.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:253,18,0
CP000253.1 408018 . G A 217.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:246,18,0
CP000253.1 408046 . G A 178.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:207,15,0
CP000253.1 408055 . A G 130.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.67;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:12:158,12,0
CP000253.1 408283 . C A 836.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0728;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:63:865,63,0
CP000253.1 408335 . C T 917.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:41:66:946,66,0
CP000253.1 408354 . T A 1053.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4089;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.95;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:75:1082,75,0
CP000253.1 408361 . A G 1062.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5067;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.14;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:75:1091,75,0
CP000253.1 408557 . A T 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 408590 . A T 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 408649 . C A 255.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:284,21,0
CP000253.1 408683 . T A 164.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:193,15,0
CP000253.1 408686 . A G 177.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.65;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:206,15,0
CP000253.1 408692 . A G 166.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:195,15,0
CP000253.1 409128 . A G 763.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.987;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.46;ReadPosRankSum=-1.020;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,33:34:54:792,54,0
CP000253.1 409480 . A T 679.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.93;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:708,48,0
CP000253.1 409708 . G A 398.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:427,30,0
CP000253.1 409764 . C A 584.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.66;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:613,42,0
CP000253.1 409840 . T C 710.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:739,51,0
CP000253.1 409846 . C T 668.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:697,48,0
CP000253.1 409847 . A T 685.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:714,51,0
CP000253.1 409879 . C T 795.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3659;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:57:824,57,0
CP000253.1 409921 . A G 908.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:66:937,66,0
CP000253.1 409939 . A G 915.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:66:944,66,0
CP000253.1 409987 . T C 975.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:69:1004,69,0
CP000253.1 410002 . C A 979.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:69:1008,69,0
CP000253.1 410020 . C T 842.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:871,60,0
CP000253.1 410026 . G A 711.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:51:740,51,0
CP000253.1 410032 . C T 406.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:435,30,0
CP000253.1 410033 . C T 404.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:433,30,0
CP000253.1 410135 . A T 1167.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1196,84,0
CP000253.1 410141 . C T 1174.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1203,84,0
CP000253.1 410174 . T C 2001.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2030,141,0
CP000253.1 410182 . T A 2128.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2157,151,0
CP000253.1 410195 . A C 2383.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3345;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2412,169,0
CP000253.1 410227 . G A 2530.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.903;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7193;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.22;ReadPosRankSum=2.285;SOR=0.830 GT:AD:DP:GQ:PL 1/1:2,107:109:99:2559,143,0
CP000253.1 410228 . A T 2491.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.655;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7015;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.86;ReadPosRankSum=2.285;SOR=0.830 GT:AD:DP:GQ:PL 1/1:2,107:109:99:2520,136,0
CP000253.1 410230 . C T 2575.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.966;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7015;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.85;ReadPosRankSum=1.502;SOR=0.280 GT:AD:DP:GQ:PL 1/1:1,107:109:99:2604,181,0
CP000253.1 410237 . G C 2503.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.514;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0249;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.97;ReadPosRankSum=2.233;SOR=0.830 GT:AD:DP:GQ:PL 1/1:2,107:109:99:2532,139,0
CP000253.1 410238 . T A 2534.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.500;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.25;ReadPosRankSum=2.233;SOR=0.830 GT:AD:DP:GQ:PL 1/1:2,107:109:99:2563,139,0
CP000253.1 410251 . A C 2525.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.811;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=113.4177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.96;ReadPosRankSum=1.985;SOR=0.808 GT:AD:DP:GQ:PL 1/1:2,108:110:99:2554,144,0
CP000253.1 410267 . T C 2999.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3570;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3028,208,0
CP000253.1 410279 . T C 3079.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3674;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3108,214,0
CP000253.1 410325 . T C 2628.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.453;DP=121;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.6054;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.28;ReadPosRankSum=-1.098;SOR=0.728 GT:AD:DP:GQ:PL 1/1:2,116:119:99:2657,145,0
CP000253.1 410328 . C T 2593.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.629;DP=121;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.98;ReadPosRankSum=1.108;SOR=0.728 GT:AD:DP:GQ:PL 1/1:2,116:119:99:2622,172,0
CP000253.1 410329 . T A 2619.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.608;DP=121;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.01;ReadPosRankSum=1.099;SOR=0.710 GT:AD:DP:GQ:PL 1/1:2,117:119:99:2648,182,0
CP000253.1 410330 . C G 2590.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.380;DP=121;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.77;ReadPosRankSum=1.037;SOR=0.710 GT:AD:DP:GQ:PL 1/1:2,117:119:99:2619,184,0
CP000253.1 410335 . C T 2732.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6042;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2761,190,0
CP000253.1 410337 . T A 2702.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,118:121:99:2731,187,0
CP000253.1 410379 . G A 2345.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.368;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8805;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=-0.114;QD=22.13;ReadPosRankSum=-0.534;SOR=0.430 GT:AD:DP:GQ:PL 1/1:3,103:107:99:2374,124,0
CP000253.1 410418 . A G 1820.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.568;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.20;ReadPosRankSum=-0.436;SOR=0.850 GT:AD:DP:GQ:PL 1/1:2,80:82:88:1849,88,0
CP000253.1 410424 . G A 1845.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7840;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1874,129,0
CP000253.1 410430 . G T 1777.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.199;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.68;ReadPosRankSum=-0.105;SOR=0.850 GT:AD:DP:GQ:PL 1/1:2,80:82:88:1806,88,0
CP000253.1 410442 . A T 1455.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.919;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.73;ReadPosRankSum=0.682;SOR=0.854 GT:AD:DP:GQ:PL 1/1:2,65:67:64:1484,64,0
CP000253.1 410457 . T A 1422.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.319;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.95;ReadPosRankSum=1.056;SOR=0.906 GT:AD:DP:GQ:PL 1/1:2,60:63:99:1451,102,0
CP000253.1 410463 . A C 1242.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.427;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9557;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.80;ReadPosRankSum=1.454;SOR=0.884 GT:AD:DP:GQ:PL 1/1:2,55:57:52:1271,52,0
CP000253.1 410469 . T A 1261.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.939;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.94;ReadPosRankSum=1.507;SOR=0.981 GT:AD:DP:GQ:PL 1/1:2,53:56:52:1290,52,0
CP000253.1 410484 . G T 1201.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.281;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1307;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.56;ReadPosRankSum=1.918;SOR=1.112 GT:AD:DP:GQ:PL 1/1:2,49:51:49:1230,49,0
CP000253.1 410502 . A G 808.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,32:32:60:837,60,0
CP000253.1 410506 . G A 781.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,30:30:57:810,57,0
CP000253.1 410508 . A G 738.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:54:767,54,0
CP000253.1 410561 . C A 269.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:298,21,0
CP000253.1 410597 . C T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 410678 . A G 178.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.88;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:207,15,0
CP000253.1 410772 . G A 1856.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1885,135,0
CP000253.1 410778 . G A 1912.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.359;DP=79;Dels=0.00;ExcessHet=3.0103;FS=3.736;HaplotypeScore=9.6075;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.52;ReadPosRankSum=1.191;SOR=0.785 GT:AD:DP:GQ:PL 1/1:1,77:79:99:1941,104,0
CP000253.1 410805 . A T 2157.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=1.030 GT:AD:DP:GQ:PL 1/1:0,87:88:99:2186,157,0
CP000253.1 410850 . A T 2408.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4735;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2437,172,0
CP000253.1 410919 . T C 3015.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.300;DP=131;Dels=0.00;ExcessHet=3.0103;FS=3.460;HaplotypeScore=12.4063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.38;ReadPosRankSum=-0.334;SOR=0.594 GT:AD:DP:GQ:PL 1/1:2,127:131:99:3044,180,0
CP000253.1 410952 . C T 3762.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=1.045 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3791,268,0
CP000253.1 411129 . G T 3161.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,125:128:99:3190,229,0
CP000253.1 411198 . C T 2668.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2883;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.91;ReadPosRankSum=0.808;SOR=0.543 GT:AD:DP:GQ:PL 1/1:1,102:103:99:2697,190,0
CP000253.1 411210 . G A 2545.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2574,184,0
CP000253.1 411300 . A T 1308.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:96:1337,96,0
CP000253.1 411303 . G A 1303.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3023;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:96:1332,96,0
CP000253.1 411316 . A G 1452.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1481,108,0
CP000253.1 411336 . G T 1565.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.318;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=1.273;SOR=0.374 GT:AD:DP:GQ:PL 1/1:1,63:64:99:1594,117,0
CP000253.1 411338 . C T 1664.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1693,123,0
CP000253.1 411390 . G A 2008.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:76:99:2037,144,0
CP000253.1 411456 . T G 2110.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.459;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6393;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.26;ReadPosRankSum=0.368;SOR=0.110 GT:AD:DP:GQ:PL 1/1:2,85:87:99:2139,128,0
CP000253.1 411462 . G T 2344.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2373,169,0
CP000253.1 411477 . A G 2597.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2626,184,0
CP000253.1 411498 . T C 2814.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2843,202,0
CP000253.1 411507 . G A 2908.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2937,205,0
CP000253.1 411571 . C T 3778.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,160:160:99:3807,268,0
CP000253.1 411607 . C T 3887.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,164:164:99:3916,271,0
CP000253.1 411624 . C T 3544.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.667;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.87;ReadPosRankSum=0.944;SOR=0.138 GT:AD:DP:GQ:PL 1/1:2,153:155:99:3573,250,0
CP000253.1 411669 . T C 3714.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5688;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,160:160:99:3743,262,0
CP000253.1 411837 . C T 3380.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5852;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3409,241,0
CP000253.1 411999 . G A 1316.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4374;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1345,96,0
CP000253.1 412011 . T A 1250.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.02;ReadPosRankSum=1.352;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,49:50:90:1279,90,0
CP000253.1 412118 . A G 2470.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0355;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2499,178,0
CP000253.1 412134 . G A 2374.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6818;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2403,169,0
CP000253.1 412135 . C T 2462.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2491,178,0
CP000253.1 412164 . G A 2390.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3323;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2419,172,0
CP000253.1 412172 . C T 2745.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2774,199,0
CP000253.1 412183 . A G 2781.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.482;DP=108;Dels=0.00;ExcessHet=3.0103;FS=3.666;HaplotypeScore=11.4365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.00;ReadPosRankSum=-0.778;SOR=0.726 GT:AD:DP:GQ:PL 1/1:1,106:108:99:2810,204,0
CP000253.1 412206 . A T 2970.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.06;ReadPosRankSum=0.183;SOR=0.725 GT:AD:DP:GQ:PL 1/1:1,113:114:99:2999,217,0
CP000253.1 412229 . A C 3069.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.93;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3098,220,0
CP000253.1 412230 . C T 2915.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,109:110:99:2944,211,0
CP000253.1 412231 . A G 2985.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=1.138 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3014,217,0
CP000253.1 412237 . G A 3473.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.926;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.14;ReadPosRankSum=1.733;SOR=1.010 GT:AD:DP:GQ:PL 1/1:1,127:128:99:3502,250,0
CP000253.1 412256 . T A 3751.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0473;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,147:149:99:3780,265,0
CP000253.1 412271 . C A 3765.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.508;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.45;ReadPosRankSum=1.732;SOR=0.537 GT:AD:DP:GQ:PL 1/1:2,152:154:99:3794,268,0
CP000253.1 412277 . C T 3850.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.849;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5642;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.00;ReadPosRankSum=0.945;SOR=0.545 GT:AD:DP:GQ:PL 1/1:1,153:156:99:3879,271,0
CP000253.1 412283 . T C 3769.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.568;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.86;ReadPosRankSum=-1.338;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,157:159:99:3798,245,0
CP000253.1 412302 . T C 4391.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.525;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0377;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.67;ReadPosRankSum=-2.313;SOR=0.917 GT:AD:DP:GQ:PL 1/1:2,176:183:99:4420,316,0
CP000253.1 412309 . T A 4513.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,188:189:99:4542,319,0
CP000253.1 412313 . A G 4542.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4571,322,0
CP000253.1 412331 . T C 4690.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.2061;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,197:199:99:4719,328,0
CP000253.1 412350 . C T 4428.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.381;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8836;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.81;ReadPosRankSum=1.044;SOR=0.831 GT:AD:DP:GQ:PL 1/1:2,184:189:99:4457,313,0
CP000253.1 412354 . A C 4400.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.051;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.1823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.41;ReadPosRankSum=1.557;SOR=0.537 GT:AD:DP:GQ:PL 1/1:3,185:188:99:4429,310,0
CP000253.1 412355 . C T 4576.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.582;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.9422;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.96;ReadPosRankSum=1.949;SOR=0.769 GT:AD:DP:GQ:PL 1/1:2,189:191:99:4605,322,0
CP000253.1 412424 . G T 4948.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7131;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.45;ReadPosRankSum=1.503;SOR=0.273 GT:AD:DP:GQ:PL 1/1:1,210:211:99:4977,349,0
CP000253.1 412427 . T C 5042.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6462;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,210:211:99:5071,355,0
CP000253.1 412430 . C A 5183.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,211:211:99:5212,361,0
CP000253.1 412435 . T C 5361.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0429;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,225:225:99:5390,376,0
CP000253.1 412442 . G A 5600.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,233:234:99:5629,394,0
CP000253.1 412457 . C T 5654.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2669;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,236:238:99:5683,397,0
CP000253.1 412484 . T A 5499.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.954;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.60;ReadPosRankSum=-0.714;SOR=0.293 GT:AD:DP:GQ:PL 1/1:1,232:233:99:5528,382,0
CP000253.1 412694 . C T 1530.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1559,108,0
CP000253.1 413142 . A G 760.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6432;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:34:57:789,57,0
CP000253.1 413757 . C T 3754.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.618;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.61;ReadPosRankSum=-1.291;SOR=0.158 GT:AD:DP:GQ:PL 1/1:2,157:159:99:3783,265,0
CP000253.1 413904 . T G 4195.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.524;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.98;ReadPosRankSum=0.624;SOR=0.777 GT:AD:DP:GQ:PL 1/1:4,171:175:99:4224,277,0
CP000253.1 413923 . T C 4346.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4375,307,0
CP000253.1 414048 . C T 4160.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,167:169:99:4189,298,0
CP000253.1 414075 . T A 4043.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.695;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2378;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=-1.689;SOR=0.367 GT:AD:DP:GQ:PL 1/1:1,157:160:99:4072,295,0
CP000253.1 414336 . A G 3155.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.859;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6915;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.05;ReadPosRankSum=-0.963;SOR=0.403 GT:AD:DP:GQ:PL 1/1:1,125:126:99:3184,226,0
CP000253.1 414351 . T C 3005.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3034,214,0
CP000253.1 414355 . C A 2973.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3629;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3002,214,0
CP000253.1 414357 . C A 2961.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.907;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.98;ReadPosRankSum=0.487;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,113:114:99:2990,214,0
CP000253.1 414360 . A G 3146.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,121:122:99:3175,226,0
CP000253.1 414647 . G C 4326.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.437;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2105;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.45;ReadPosRankSum=0.152;SOR=0.115 GT:AD:DP:GQ:PL 1/1:2,168:172:99:4355,313,0
CP000253.1 414675 . A G 3899.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,152:153:99:3928,283,0
CP000253.1 414696 . A G 3580.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.640;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0390;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=-0.969;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,142:145:99:3609,265,0
CP000253.1 414711 . T G 3683.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.688;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.58;ReadPosRankSum=1.672;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,143:144:99:3712,268,0
CP000253.1 414717 . T C 3626.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3072;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.09;ReadPosRankSum=-1.346;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,138:141:99:3655,262,0
CP000253.1 414735 . C T 3633.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.870;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.2993;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.41;ReadPosRankSum=-0.969;SOR=0.405 GT:AD:DP:GQ:PL 1/1:1,142:143:99:3662,262,0
CP000253.1 414762 . T C 3415.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3444,244,0
CP000253.1 414776 . C A 3204.83 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.473;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.65;ReadPosRankSum=0.506;SOR=0.242 GT:AD:DP:GQ:PL 1/1:1,129:131:99:3235,229,0
CP000253.1 414810 . G A 3766.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9969;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,147:148:99:3795,274,0
CP000253.1 414843 . T C 4022.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.658;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.99;ReadPosRankSum=0.043;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,160:163:99:4051,269,0
CP000253.1 414885 . G T 4143.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.924;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2040;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.74;ReadPosRankSum=0.721;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,160:161:99:4172,301,0
CP000253.1 414902 . C G 4338.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3121;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4367,310,0
CP000253.1 415077 . A G 4225.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0205;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4254,298,0
CP000253.1 415098 . A T 4022.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4051,283,0
CP000253.1 415101 . T C 3863.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,162:163:99:3892,277,0
CP000253.1 415104 . A C 3893.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,162:163:99:3922,280,0
CP000253.1 415158 . T C 3692.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3721,265,0
CP000253.1 415164 . A C 3632.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.38;ReadPosRankSum=1.407;SOR=0.769 GT:AD:DP:GQ:PL 1/1:1,148:149:99:3661,259,0
CP000253.1 415696 . C T 4222.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7377;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4251,295,0
CP000253.1 415885 . G A 3480.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.754;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=1.135;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,138:139:99:3509,209,0
CP000253.1 415940 . G T 3405.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3434,244,0
CP000253.1 416245 . A G 2742.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2771,199,0
CP000253.1 416355 . C T 3290.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2211;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=25.12;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,131:132:99:3319,238,0
CP000253.1 416544 . C T 3312.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7824;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.93;SOR=1.046 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3341,244,0
CP000253.1 416592 . A G 4337.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.4347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=1.026 GT:AD:DP:GQ:PL 1/1:0,164:165:99:4366,316,0
CP000253.1 416658 . G A 4282.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6153;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4311,307,0
CP000253.1 416685 . G A 4591.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9319;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4620,328,0
CP000253.1 416999 . T C 4191.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4220,304,0
CP000253.1 417060 . T A 4344.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4999;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.82;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4373,313,0
CP000253.1 417061 . T G 4255.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5334;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.27;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4284,307,0
CP000253.1 417064 . A T 4192.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6448;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=25.88;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4221,301,0
CP000253.1 417066 . T A 4322.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5389;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.85;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,161:162:99:4351,310,0
CP000253.1 417070 . T C 4304.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4056;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.25;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,164:165:99:4333,310,0
CP000253.1 417120 . C A 4891.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.748;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.7084;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=1.591;SOR=0.273 GT:AD:DP:GQ:PL 1/1:1,193:194:99:4920,349,0
CP000253.1 417186 . G A 4950.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,192:193:99:4979,352,0
CP000253.1 417198 . G A 4700.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4190;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,190:192:99:4729,337,0
CP000253.1 417231 . A C 4363.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.2291;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,189:191:99:4392,316,0
CP000253.1 417344 . C A 3677.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.86;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3706,268,0
CP000253.1 417348 . A G 3669.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9915;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.39;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3698,271,0
CP000253.1 417375 . A G 3485.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.8995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,134:137:99:3514,259,0
CP000253.1 417612 . A T 3000.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1641;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=24.80;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3029,217,0
CP000253.1 417619 . C T 2841.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5543;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=24.93;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2870,205,0
CP000253.1 417741 . C T 1631.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1660,120,0
CP000253.1 418028 . T A 4169.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,169:170:99:4198,295,0
CP000253.1 418040 . A G 4523.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3402;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4552,316,0
CP000253.1 418062 . T C 4844.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0824;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,205:205:99:4873,340,0
CP000253.1 418128 . T C 4897.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8249;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,215:216:99:4926,340,0
CP000253.1 418163 . T C 5459.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6617;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,229:230:99:5488,382,0
CP000253.1 418427 . G A 3330.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3359,232,0
CP000253.1 418515 . T A 1811.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1840,129,0
CP000253.1 418635 . T C 378.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:407,30,0
CP000253.1 418740 . A G 302.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:331,24,0
CP000253.1 419005 . A G 1568.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=1.092 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1597,111,0
CP000253.1 419118 . C T 2431.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.442;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.33;ReadPosRankSum=-1.811;SOR=1.203 GT:AD:DP:GQ:PL 1/1:2,94:96:99:2460,136,0
CP000253.1 419172 . C A 3274.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6448;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3303,232,0
CP000253.1 419280 . A T 5213.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,214:214:99:5242,367,0
CP000253.1 419334 . G A 5776.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7382;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,246:247:99:5805,403,0
CP000253.1 419395 . C G 6184.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2169;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6213,436,0
CP000253.1 419431 . T C 5639.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.1329;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,230:234:99:5668,403,0
CP000253.1 419433 . G A 5967.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.5928;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,241:243:99:5996,421,0
CP000253.1 419658 . G T 5363.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.740;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6068;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.95;ReadPosRankSum=2.077;SOR=0.300 GT:AD:DP:GQ:PL 1/1:2,222:226:99:5392,376,0
CP000253.1 419800 . T C 4633.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4662,325,0
CP000253.1 419946 . A G 2758.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,115:116:99:2787,193,0
CP000253.1 419952 . T C 2650.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.917;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1479;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.32;ReadPosRankSum=0.986;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,108:109:99:2679,187,0
CP000253.1 419955 . T G 2567.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2596,181,0
CP000253.1 419994 . G A 2398.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8224;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2427,169,0
CP000253.1 420000 . C T 2430.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2459,172,0
CP000253.1 420129 . A G 1046.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1075,75,0
CP000253.1 420174 . G T 485.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:514,36,0
CP000253.1 420206 . C A 788.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:35:57:817,57,0
CP000253.1 420303 . G A 871.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:63:900,63,0
CP000253.1 420381 . A T 851.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:63:880,63,0
CP000253.1 420458 . C A 1283.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8216;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:93:1312,93,0
CP000253.1 420459 . T C 1321.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8216;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1350,96,0
CP000253.1 420554 . C T 550.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.87;MQ0=0;QD=23.95;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:42:579,42,0
CP000253.1 420647 . A T 2133.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.983;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7784;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.53;ReadPosRankSum=0.730;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,86:88:99:2162,151,0
CP000253.1 420686 . T C 2818.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3426;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2847,199,0
CP000253.1 420702 . C A 2816.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5202;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2845,199,0
CP000253.1 420707 . T C 2899.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6535;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2928,205,0
CP000253.1 421109 . A C 2288.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.513;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5363;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.72;ReadPosRankSum=0.153;SOR=0.562 GT:AD:DP:GQ:PL 1/1:2,87:89:99:2317,166,0
CP000253.1 421259 . C T 6120.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3022;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6149,436,0
CP000253.1 421377 . G A 6677.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,247:248:99:6706,479,0
CP000253.1 421409 . C T 6373.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.739;DP=240;Dels=0.00;ExcessHet=3.0103;FS=3.321;HaplotypeScore=27.1101;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.78;ReadPosRankSum=1.285;SOR=0.382 GT:AD:DP:GQ:PL 1/1:2,236:240:99:6402,426,0
CP000253.1 421411 . T C 6607.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.3833;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=0.858 GT:AD:DP:GQ:PL 1/1:0,247:250:99:6636,487,0
CP000253.1 421622 . T C 4200.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.343;DP=174;Dels=0.00;ExcessHet=3.0103;FS=3.644;HaplotypeScore=19.7129;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.28;ReadPosRankSum=-0.092;SOR=0.598 GT:AD:DP:GQ:PL 1/1:2,171:174:99:4229,305,0
CP000253.1 421640 . T G 4108.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9243;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4137,289,0
CP000253.1 422016 . G A 737.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8687;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:54:766,54,0
CP000253.1 422083 . G A 334.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:363,27,0
CP000253.1 422226 . T G 446.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.27;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:475,33,0
CP000253.1 422696 . A T 3775.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=1.139 GT:AD:DP:GQ:PL 1/1:0,143:146:99:3804,271,0
CP000253.1 423227 . T C 2624.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2653,193,0
CP000253.1 423270 . A G 1635.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.82;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:62:99:1664,120,0
CP000253.1 423273 . A T 1478.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1507,108,0
CP000253.1 423279 . C T 1566.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:60:99:1595,114,0
CP000253.1 423300 . T C 1577.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1606,114,0
CP000253.1 423306 . G A 1638.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1667,120,0
CP000253.1 423315 . A G 1622.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.695;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.17;ReadPosRankSum=-0.299;SOR=0.583 GT:AD:DP:GQ:PL 1/1:2,60:62:99:1651,120,0
CP000253.1 423321 . T C 1820.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.924;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.01;ReadPosRankSum=0.099;SOR=0.650 GT:AD:DP:GQ:PL 1/1:1,69:70:99:1849,132,0
CP000253.1 423333 . C A 1879.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1368;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1908,135,0
CP000253.1 423339 . A T 1980.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=1.164 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2009,144,0
CP000253.1 423457 . A G 3058.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8598;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3087,220,0
CP000253.1 423486 . A G 3348.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6424;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3377,241,0
CP000253.1 423507 . A T 3546.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5242;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.956 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3575,253,0
CP000253.1 423540 . A T 4115.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4390;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,167:168:99:4144,295,0
CP000253.1 423780 . T C 6237.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.836;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5338;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;MQRankSum=0.000;QD=25.36;ReadPosRankSum=-1.324;SOR=0.449 GT:AD:DP:GQ:PL 1/1:1,245:248:99:6266,448,0
CP000253.1 423831 . T C 6149.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4310;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.84;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,238:238:99:6178,436,0
CP000253.1 423846 . A G 6184.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7895;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,239:241:99:6213,442,0
CP000253.1 424041 . C T 5343.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3396;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,206:208:99:5372,382,0
CP000253.1 424410 . T G 3921.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1733;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.82;ReadPosRankSum=1.667;SOR=0.713 GT:AD:DP:GQ:PL 1/1:1,157:158:99:3950,277,0
CP000253.1 424411 . T C 3937.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1733;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=1.060 GT:AD:DP:GQ:PL 1/1:0,157:158:99:3966,280,0
CP000253.1 424431 . G A 3057.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3967;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.27;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3086,217,0
CP000253.1 424443 . G A 1766.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5604;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.61;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1795,126,0
CP000253.1 424446 . T A 1810.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4600;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.87;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1839,129,0
CP000253.1 424452 . G T 1698.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3541;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.13;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1727,123,0
CP000253.1 424454 . T A 1633.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5933;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=25.13;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1662,117,0
CP000253.1 424455 . T A 1690.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5933;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.01;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1719,123,0
CP000253.1 424456 . G A 1686.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5933;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.36;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,64:65:99:1715,120,0
CP000253.1 424460 . T A 1745.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4874;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.45;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1774,126,0
CP000253.1 424462 . C T 1724.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3195;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.13;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1753,123,0
CP000253.1 424468 . T A 1748.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.50;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1777,126,0
CP000253.1 424498 . A C 1449.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=28.43;SOR=1.436 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1478,105,0
CP000253.1 424499 . T A 1318.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=28.06;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,47:47:96:1347,96,0
CP000253.1 424502 . A C 1316.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=28.02;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,47:47:96:1345,96,0
CP000253.1 424505 . A G 1320.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=28.10;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,47:47:96:1349,96,0
CP000253.1 424510 . C A 1321.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=28.12;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,47:47:96:1350,96,0
CP000253.1 424514 . G A 1359.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=28.33;SOR=1.298 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1388,99,0
CP000253.1 424521 . A T 1330.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=27.72;SOR=1.298 GT:AD:DP:GQ:PL 1/1:0,48:48:96:1359,96,0
CP000253.1 424535 . T G 1359.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3471;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=28.33;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1388,99,0
CP000253.1 424578 . G A 450.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.17;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:36:479,36,0
CP000253.1 424597 . C A 290.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:319,24,0
CP000253.1 424727 . G A 1951.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1980,138,0
CP000253.1 424730 . A T 1872.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.41;ReadPosRankSum=0.608;SOR=0.233 GT:AD:DP:GQ:PL 1/1:1,79:80:99:1901,132,0
CP000253.1 424736 . G A 1861.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.57;ReadPosRankSum=1.341;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,78:80:99:1890,132,0
CP000253.1 424737 . A T 1917.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1946,135,0
CP000253.1 424739 . C A 1921.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1950,135,0
CP000253.1 424743 . A C 1943.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1972,138,0
CP000253.1 424748 . A G 1944.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:80:99:1973,138,0
CP000253.1 424751 . G A 1977.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2006,141,0
CP000253.1 424759 . A C 2451.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2480,175,0
CP000253.1 424931 . T A 3459.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.100;DP=130;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7127;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;MQRankSum=11.402;QD=26.82;ReadPosRankSum=-0.215;SOR=0.402 GT:AD:DP:GQ:PL 1/1:1,128:129:99:3488,247,0
CP000253.1 424935 . A G 3320.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.788;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1364;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=0.000;QD=25.94;ReadPosRankSum=-1.124;SOR=0.415 GT:AD:DP:GQ:PL 1/1:1,127:128:99:3349,206,0
CP000253.1 424936 . T G 3401.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2423;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=26.58;SOR=1.135 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3430,244,0
CP000253.1 424937 . G C 3359.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.654;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4815;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=0.000;QD=26.25;ReadPosRankSum=-1.096;SOR=0.415 GT:AD:DP:GQ:PL 1/1:1,127:128:99:3388,206,0
CP000253.1 424941 . A C 3419.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5150;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=26.72;SOR=1.135 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3448,247,0
CP000253.1 424943 . G A 3370.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6818;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=26.33;SOR=1.135 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3399,241,0
CP000253.1 424946 . T A 3457.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4702;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=26.60;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3486,247,0
CP000253.1 425003 . C G 3608.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8390;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=24.55;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3637,256,0
CP000253.1 425361 . A C 4685.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.696;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2588;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.53;ReadPosRankSum=1.216;SOR=0.359 GT:AD:DP:GQ:PL 1/1:1,190:193:99:4714,334,0
CP000253.1 425500 . A G 5116.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.7892;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,222:224:99:5145,358,0
CP000253.1 425660 . G A 2599.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2628,184,0
CP000253.1 425675 . A T 2504.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.813;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5885;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.80;ReadPosRankSum=0.841;SOR=0.936 GT:AD:DP:GQ:PL 1/1:2,99:101:99:2533,178,0
CP000253.1 425793 . C T 2430.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2459,172,0
CP000253.1 426035 . A T 2718.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4009;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2747,190,0
CP000253.1 426170 . T G 3003.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.977;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1123;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=1.327;SOR=0.460 GT:AD:DP:GQ:PL 1/1:1,123:124:99:3032,211,0
CP000253.1 426179 . G A 2977.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3614;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3006,208,0
CP000253.1 426371 . T C 1896.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.911;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.32;ReadPosRankSum=-1.622;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,77:78:99:1925,135,0
CP000253.1 426492 . G A 4142.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9395;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4171,292,0
CP000253.1 426608 . A C 5495.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.935;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=1.253;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,219:220:99:5524,385,0
CP000253.1 426638 . T C 5990.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6019,418,0
CP000253.1 426689 . A G 7040.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7299;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.28;ReadPosRankSum=0.488;SOR=0.542 GT:AD:DP:GQ:PL 1/1:1,248:250:99:7069,512,0
CP000253.1 426695 . A G 6863.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.46;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6892,500,0
CP000253.1 426701 . G A 6109.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,224:224:99:6138,445,0
CP000253.1 426728 . A G 6092.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.3502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,235:236:99:6121,439,0
CP000253.1 426827 . G A 5983.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3628;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6012,418,0
CP000253.1 426905 . C T 5772.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3259;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,236:236:99:5801,406,0
CP000253.1 426908 . G A 5572.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,227:227:99:5601,391,0
CP000253.1 426974 . A G 4650.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6080;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=24.22;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,192:192:99:4679,331,0
CP000253.1 427013 . C T 4665.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.36;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,184:184:99:4694,337,0
CP000253.1 427085 . A T 3855.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5343;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3884,274,0
CP000253.1 427334 . G T 998.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1027,72,0
CP000253.1 427337 . G C 995.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1024,72,0
CP000253.1 427367 . T A 464.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:36:493,36,0
CP000253.1 427451 . A G 144.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:8:12:172,12,0
CP000253.1 428073 . T C 2203.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5406;MLEAC=2;MLEAF=1.00;MQ=59.44;MQ0=0;QD=23.70;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:94:99:2232,160,0
CP000253.1 428076 . C T 2210.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.789;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3505;MLEAC=2;MLEAF=1.00;MQ=59.43;MQ0=0;MQRankSum=-0.162;QD=24.56;ReadPosRankSum=0.925;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,89:92:99:2239,160,0
CP000253.1 428088 . T C 2445.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5047;MLEAC=2;MLEAF=1.00;MQ=59.49;MQ0=0;QD=23.75;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2474,175,0
CP000253.1 428121 . T C 2077.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2490;MLEAC=2;MLEAF=1.00;MQ=59.66;MQ0=0;QD=23.61;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2106,147,0
CP000253.1 428187 . A T 2479.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2668;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2508,175,0
CP000253.1 428250 . G T 2855.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2884,199,0
CP000253.1 428253 . A G 2852.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0883;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2881,202,0
CP000253.1 428469 . C T 2822.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2851,196,0
CP000253.1 428687 . T C 2025.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8335;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.02;ReadPosRankSum=1.503;SOR=0.332 GT:AD:DP:GQ:PL 1/1:1,87:88:99:2054,141,0
CP000253.1 428740 . T A 2345.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2374,163,0
CP000253.1 428810 . T C 2693.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2722,187,0
CP000253.1 429302 . G A 1286.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,52:52:93:1315,93,0
CP000253.1 429323 . G A 1297.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,52:52:93:1326,93,0
CP000253.1 429402 . G A 2041.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,76:77:99:2070,147,0
CP000253.1 429587 . T G 6111.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.933;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.55;ReadPosRankSum=-1.218;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,248:249:99:6140,427,0
CP000253.1 430045 . G A 2262.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2291,160,0
CP000253.1 430165 . T C 1302.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:57:93:1331,93,0
CP000253.1 430177 . C A 1636.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1665,117,0
CP000253.1 430555 . C T 2853.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,121:122:99:2882,199,0
CP000253.1 430564 . C T 2725.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2754,193,0
CP000253.1 430603 . T C 3103.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3132,217,0
CP000253.1 430747 . C A 4192.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4221,289,0
CP000253.1 431115 . A G 1153.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:44:87:1182,87,0
CP000253.1 431172 . T A 1129.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:42:84:1158,84,0
CP000253.1 431178 . G T 1234.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,47:47:90:1263,90,0
CP000253.1 432762 . T C 3873.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.909;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5621;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.21;ReadPosRankSum=0.499;SOR=0.365 GT:AD:DP:GQ:PL 1/1:1,159:160:99:3902,271,0
CP000253.1 432771 . T A 3966.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3121;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,165:165:99:3995,277,0
CP000253.1 433170 . A G 1416.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:58:99:1445,102,0
CP000253.1 433314 . A G 586.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:45:615,45,0
CP000253.1 433651 . T C 5331.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.480;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.2089;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.59;ReadPosRankSum=2.097;SOR=0.105 GT:AD:DP:GQ:PL 1/1:2,224:230:99:5360,376,0
CP000253.1 433789 . A G 5551.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.7807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,231:232:99:5580,394,0
CP000253.1 434192 . C T 3428.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.963;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4784;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.32;ReadPosRankSum=0.648;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,146:148:99:3457,238,0
CP000253.1 434253 . T C 3037.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5551;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,127:128:99:3066,214,0
CP000253.1 434279 . T C 2997.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.586;DP=129;Dels=0.00;ExcessHet=3.0103;FS=3.081;HaplotypeScore=8.3366;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.42;ReadPosRankSum=-1.110;SOR=0.401 GT:AD:DP:GQ:PL 1/1:1,127:129:99:3026,182,0
CP000253.1 435161 . T C 4637.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.400;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.5936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.05;ReadPosRankSum=0.000;SOR=0.289 GT:AD:DP:GQ:PL 1/1:1,177:180:99:4666,330,0
CP000253.1 435500 . G T 6431.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.899;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8846;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.15;ReadPosRankSum=-0.768;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,245:247:99:6460,457,0
CP000253.1 435578 . T G 6787.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7418;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.40;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,239:239:99:6816,497,0
CP000253.1 435662 . C T 6740.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3389;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.96;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6769,491,0
CP000253.1 436184 . G A 4009.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4180;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,153:154:99:4038,286,0
CP000253.1 436424 . C T 4708.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8012;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,190:192:99:4737,334,0
CP000253.1 437000 . G A 4699.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2856;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,188:188:99:4728,337,0
CP000253.1 437051 . G A 5491.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,211:212:99:5520,400,0
CP000253.1 437310 . A G 6482.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3540;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,245:245:99:6511,475,0
CP000253.1 437396 . C T 6431.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,245:246:99:6460,460,0
CP000253.1 437414 . T C 6479.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.677;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.34;ReadPosRankSum=-1.572;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,245:247:99:6508,473,0
CP000253.1 437801 . T C 5591.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.2249;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=25.89;SOR=0.916 GT:AD:DP:GQ:PL 1/1:0,216:219:99:5620,406,0
CP000253.1 437980 . A G 6038.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.761;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.2269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.16;ReadPosRankSum=1.170;SOR=0.427 GT:AD:DP:GQ:PL 1/1:1,239:243:99:6067,436,0
CP000253.1 438344 . G A 5712.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3272;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=26.09;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,219:219:99:5741,412,0
CP000253.1 438382 . A G 5765.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.0885;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=26.45;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5794,412,0
CP000253.1 438436 . G A 5930.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5524;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,230:230:99:5959,424,0
CP000253.1 438445 . A G 5964.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.732;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.3800;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.96;ReadPosRankSum=-1.044;SOR=0.291 GT:AD:DP:GQ:PL 1/1:1,238:241:99:5993,433,0
CP000253.1 438523 . C A 5907.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.471;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.8771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=-0.278;SOR=0.309 GT:AD:DP:GQ:PL 1/1:1,236:237:99:5936,421,0
CP000253.1 438526 . T C 5609.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.625;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.5868;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.87;ReadPosRankSum=1.239;SOR=0.465 GT:AD:DP:GQ:PL 1/1:2,233:236:99:5638,397,0
CP000253.1 438674 . T C 5130.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7070;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,198:201:99:5159,367,0
CP000253.1 438700 . A T 4767.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.678;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=1.205;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,186:188:99:4796,322,0
CP000253.1 439294 . T G 4164.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4152;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4193,295,0
CP000253.1 439349 . A T 3408.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,137:139:99:3437,241,0
CP000253.1 439371 . A T 3228.29 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8214;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.983 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3256,229,0
CP000253.1 439441 . A C 2096.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:88:99:2125,147,0
CP000253.1 439692 . T A 1860.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1889,132,0
CP000253.1 439733 . A G 3208.76 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7691;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3237,226,0
CP000253.1 439763 . A T 2907.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9131;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,121:122:99:2936,205,0
CP000253.1 439764 . A T 2962.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9131;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,124:124:99:2991,208,0
CP000253.1 439769 . T A 2728.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.738;DP=126;Dels=0.00;ExcessHet=3.0103;FS=2.075;HaplotypeScore=15.1657;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.83;ReadPosRankSum=1.355;SOR=0.243 GT:AD:DP:GQ:PL 1/1:4,121:126:99:2757,140,0
CP000253.1 439771 . A C 2868.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.250;DP=126;Dels=0.00;ExcessHet=3.0103;FS=3.035;HaplotypeScore=24.7082;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.14;ReadPosRankSum=0.944;SOR=0.119 GT:AD:DP:GQ:PL 1/1:2,122:126:99:2897,155,0
CP000253.1 439786 . A G 3372.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.787;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.26;ReadPosRankSum=-0.622;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,144:145:99:3401,238,0
CP000253.1 439878 . A G 3861.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7625;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,163:165:99:3890,274,0
CP000253.1 439974 . A C 3910.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.573;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8171;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.14;ReadPosRankSum=2.056;SOR=0.127 GT:AD:DP:GQ:PL 1/1:2,160:163:99:3939,280,0
CP000253.1 440019 . T C 3932.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.455;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4364;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=-0.056;QD=24.58;ReadPosRankSum=-1.451;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,159:161:99:3961,248,0
CP000253.1 440020 . C T 3888.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4364;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=-0.057;QD=25.09;ReadPosRankSum=-1.409;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,154:157:99:3917,274,0
CP000253.1 440032 . G A 3263.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8990;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3292,232,0
CP000253.1 440037 . G A 3120.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5479;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3149,223,0
CP000253.1 440041 . A G 2951.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.566;DP=125;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.5925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.80;ReadPosRankSum=0.065;SOR=0.492 GT:AD:DP:GQ:PL 1/1:3,121:124:99:2980,200,0
CP000253.1 440042 . C T 3089.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=152.3262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3118,220,0
CP000253.1 440043 . C A 3027.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.787;DP=125;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=153.3192;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.62;ReadPosRankSum=-0.042;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,122:123:99:3056,217,0
CP000253.1 440044 . C T 3079.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.882;DP=125;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=147.3312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=0.000;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,122:124:99:3108,220,0
CP000253.1 440050 . A C 3150.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=132.7611;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3179,226,0
CP000253.1 440071 . T A 3999.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,164:166:99:4028,286,0
CP000253.1 440181 . C G 4473.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4502,322,0
CP000253.1 440248 . G T 5063.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.561;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.7808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=-0.157;SOR=0.130 GT:AD:DP:GQ:PL 1/1:2,193:196:99:5092,367,0
CP000253.1 440251 . G A 5056.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.7681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,196:196:99:5085,364,0
CP000253.1 440260 . T C 4901.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.7771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,194:197:99:4930,352,0
CP000253.1 440311 . T C 4894.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.994;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.2261;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.04;ReadPosRankSum=1.604;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,187:190:99:4923,323,0
CP000253.1 440434 . A G 5762.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2343;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;MQRankSum=0.000;QD=25.84;ReadPosRankSum=-1.422;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,222:224:99:5791,412,0
CP000253.1 440435 . C A 5737.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.381;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3402;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=-0.047;QD=24.95;ReadPosRankSum=-1.746;SOR=0.729 GT:AD:DP:GQ:PL 1/1:2,228:230:99:5766,415,0
CP000253.1 440473 . G A 6255.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=41.2294;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,246:250:99:6284,448,0
CP000253.1 440530 . A G 6662.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8692;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6691,479,0
CP000253.1 440593 . A G 6746.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.471;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.31;ReadPosRankSum=1.233;SOR=0.840 GT:AD:DP:GQ:PL 1/1:2,245:247:99:6775,491,0
CP000253.1 440842 . A T 7253.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8392;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.37;SOR=1.102 GT:AD:DP:GQ:PL 1/1:0,247:247:99:7282,539,0
CP000253.1 440860 . C T 6989.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8912;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.53;SOR=1.128 GT:AD:DP:GQ:PL 1/1:0,245:248:99:7018,515,0
CP000253.1 440986 . G A 6594.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8915;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.83;SOR=1.268 GT:AD:DP:GQ:PL 1/1:0,237:238:99:6623,476,0
CP000253.1 441151 . C T 6567.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6596,470,0
CP000253.1 441310 . C T 6242.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.809;DP=244;Dels=0.00;ExcessHet=3.0103;FS=3.442;HaplotypeScore=22.3686;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.69;ReadPosRankSum=1.604;SOR=0.550 GT:AD:DP:GQ:PL 1/1:1,242:244:99:6271,424,0
CP000253.1 441316 . C T 6285.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2373;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6314,448,0
CP000253.1 441332 . C T 6396.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6425,455,0
CP000253.1 441730 . T C 1271.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:93:1300,93,0
CP000253.1 441808 . G T 3266.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2493;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3295,232,0
CP000253.1 441858 . A C 3639.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6307;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3668,256,0
CP000253.1 441901 . G T 3755.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3784,262,0
CP000253.1 441937 . C T 3468.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5276;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3497,244,0
CP000253.1 442370 . A G 6169.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.009;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4684;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=0.705;SOR=0.527 GT:AD:DP:GQ:PL 1/1:1,238:239:99:6198,436,0
CP000253.1 442808 . T C 4644.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,181:184:99:4673,334,0
CP000253.1 442837 . G A 4460.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4489,319,0
CP000253.1 443253 . T A 5172.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.63;ReadPosRankSum=0.000;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,209:210:99:5201,346,0
CP000253.1 443674 . A G 4392.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4421,310,0
CP000253.1 444001 . T C 443.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:18:33:472,33,0
CP000253.1 444410 . A T 827.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9892;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.70;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:60:856,60,0
CP000253.1 446081 . A G 1165.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:84:1194,84,0
CP000253.1 446415 . C T 4538.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=1.249 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4567,331,0
CP000253.1 446455 . T C 4761.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.341;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=42.1772;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.46;ReadPosRankSum=0.296;SOR=0.213 GT:AD:DP:GQ:PL 1/1:2,185:191:99:4790,343,0
CP000253.1 446609 . T C 5399.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,218:219:99:5428,385,0
CP000253.1 446831 . A G 3309.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5394;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3338,235,0
CP000253.1 447397 . A G 4943.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9385;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,199:199:99:4972,355,0
CP000253.1 447595 . G A 5907.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.866;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.1142;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.41;ReadPosRankSum=1.432;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,241:243:99:5936,415,0
CP000253.1 447706 . G A 6261.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9701;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.986 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6290,445,0
CP000253.1 447768 . A G 5955.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2914;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=25.02;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,238:238:99:5984,421,0
CP000253.1 447991 . T A 1775.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1804,129,0
CP000253.1 448196 . C T 3521.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1081;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3550,247,0
CP000253.1 448199 . T C 3516.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.745;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1081;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.14;ReadPosRankSum=-1.391;SOR=0.460 GT:AD:DP:GQ:PL 1/1:1,151:153:99:3545,250,0
CP000253.1 448418 . T G 389.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.84;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:30:418,30,0
CP000253.1 448520 . G A 540.56 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.665;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.62;ReadPosRankSum=0.294;SOR=0.293 GT:AD:DP:GQ:PL 1/1:1,24:25:7:568,7,0
CP000253.1 448663 . A G 162.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.693;DP=25;Dels=0.00;ExcessHet=3.0103;FS=1.603;HaplotypeScore=0.8321;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.51;ReadPosRankSum=3.723;SOR=1.085 GT:AD:DP:GQ:PL 0/1:16,9:25:99:191,0,443
CP000253.1 448771 . T A 848.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=55.57;MQ0=0;QD=24.25;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:66:877,66,0
CP000253.1 448984 . T G 42.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.189;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1006;MLEAC=2;MLEAF=1.00;MQ=20.57;MQ0=1;MQRankSum=0.608;QD=5.34;ReadPosRankSum=0.328;SOR=2.494 GT:AD:DP:GQ:PL 1/1:3,5:9:6:70,6,0
CP000253.1 449156 . C T 33.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=4.71;MQ0=161;MQRankSum=-0.385;QD=0.20;ReadPosRankSum=-0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:124,41:167:62:62,0,68
CP000253.1 452158 . T A 24.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.587;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2203;MLEAC=1;MLEAF=0.500;MQ=5.29;MQ0=236;MQRankSum=-0.869;QD=0.10;ReadPosRankSum=-0.144;SOR=0.368 GT:AD:DP:GQ:PL 0/1:178,68:250:53:53,0,164
CP000253.1 453801 . A T 263.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9987;MLEAC=2;MLEAF=1.00;MQ=50.89;MQ0=1;QD=17.59;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,15:15:21:292,21,0
CP000253.1 453812 . C G 17.84 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.317;DP=18;Dels=0.00;ExcessHet=3.0103;FS=2.808;HaplotypeScore=2.6548;MLEAC=1;MLEAF=0.500;MQ=51.14;MQ0=1;MQRankSum=-1.828;QD=1.05;ReadPosRankSum=-1.739;SOR=1.863 GT:AD:DP:GQ:PL 0/1:14,3:18:46:46,0,315
CP000253.1 453881 . C T 261.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.386;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6792;MLEAC=1;MLEAF=0.500;MQ=44.67;MQ0=3;MQRankSum=2.703;QD=3.36;ReadPosRankSum=5.444;SOR=0.566 GT:AD:DP:GQ:PL 0/1:58,20:79:99:290,0,1104
CP000253.1 453901 . C T 1909.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3332;MLEAC=2;MLEAF=1.00;MQ=45.27;MQ0=5;QD=21.46;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,89:92:99:1938,147,0
CP000253.1 453923 . T C 466.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.330;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.973;HaplotypeScore=29.9146;MLEAC=1;MLEAF=0.500;MQ=45.64;MQ0=5;MQRankSum=2.620;QD=4.71;ReadPosRankSum=-6.131;SOR=0.631 GT:AD:DP:GQ:PL 0/1:67,32:103:99:495,0,1240
CP000253.1 453937 . A G 801.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.287;DP=120;Dels=0.00;ExcessHet=3.0103;FS=1.524;HaplotypeScore=47.5851;MLEAC=1;MLEAF=0.500;MQ=46.85;MQ0=6;MQRankSum=3.892;QD=6.68;ReadPosRankSum=-6.962;SOR=0.536 GT:AD:DP:GQ:PL 0/1:70,50:120:99:830,0,1392
CP000253.1 453977 . G A 1072.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.829;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.2313;MLEAC=1;MLEAF=0.500;MQ=47.90;MQ0=6;MQRankSum=5.179;QD=7.61;ReadPosRankSum=-2.468;SOR=0.660 GT:AD:DP:GQ:PL 0/1:85,56:142:99:1101,0,1435
CP000253.1 454072 . C T 1404.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=64.2400;MLEAC=1;MLEAF=0.500;MQ=52.32;MQ0=5;MQRankSum=-6.128;QD=7.51;ReadPosRankSum=0.264;SOR=0.678 GT:AD:DP:GQ:PL 0/1:111,76:190:99:1433,0,2368
CP000253.1 454073 . T C 1457.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.218;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=64.9807;MLEAC=1;MLEAF=0.500;MQ=52.32;MQ0=5;MQRankSum=-7.017;QD=7.71;ReadPosRankSum=0.835;SOR=0.678 GT:AD:DP:GQ:PL 0/1:107,82:190:99:1486,0,2161
CP000253.1 454080 . A T 1188.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.389;DP=200;Dels=0.00;ExcessHet=3.0103;FS=2.108;HaplotypeScore=82.9426;MLEAC=1;MLEAF=0.500;MQ=52.20;MQ0=5;MQRankSum=-5.013;QD=6.03;ReadPosRankSum=-0.643;SOR=0.921 GT:AD:DP:GQ:PL 0/1:125,72:200:99:1217,0,2544
CP000253.1 454091 . C A 2783.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.535;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=71.5401;MLEAC=1;MLEAF=0.500;MQ=52.11;MQ0=4;MQRankSum=4.650;QD=14.35;ReadPosRankSum=-0.495;SOR=0.586 GT:AD:DP:GQ:PL 0/1:66,128:206:99:2812,0,1211
CP000253.1 454129 . G A 689.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.174;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=72.0984;MLEAC=1;MLEAF=0.500;MQ=54.17;MQ0=2;MQRankSum=-1.556;QD=3.45;ReadPosRankSum=7.017;SOR=0.643 GT:AD:DP:GQ:PL 0/1:154,46:200:99:718,0,3284
CP000253.1 454140 . G A 3127.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.494;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=122.6933;MLEAC=1;MLEAF=0.500;MQ=53.87;MQ0=4;MQRankSum=1.292;QD=16.04;ReadPosRankSum=0.675;SOR=0.718 GT:AD:DP:GQ:PL 0/1:63,132:220:99:3156,0,1072
CP000253.1 454180 . T C 2957.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.908;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=169.1197;MLEAC=1;MLEAF=0.500;MQ=52.68;MQ0=6;MQRankSum=-0.780;QD=12.22;ReadPosRankSum=4.322;SOR=0.683 GT:AD:DP:GQ:PL 0/1:97,145:248:99:2986,0,1952
CP000253.1 454194 . A G 2853.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.525;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.485;HaplotypeScore=59.5923;MLEAC=1;MLEAF=0.500;MQ=51.00;MQ0=6;MQRankSum=-1.563;QD=11.65;ReadPosRankSum=4.297;SOR=0.645 GT:AD:DP:GQ:PL 0/1:99,146:247:99:2882,0,1923
CP000253.1 454244 . C T 1963.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;DP=240;Dels=0.00;ExcessHet=3.0103;FS=1.608;HaplotypeScore=73.7373;MLEAC=1;MLEAF=0.500;MQ=49.78;MQ0=7;MQRankSum=0.817;QD=8.29;ReadPosRankSum=-1.010;SOR=0.807 GT:AD:DP:GQ:PL 0/1:128,109:240:99:1992,0,2109
CP000253.1 454327 . G C 1453.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.864;DP=206;Dels=0.00;ExcessHet=3.0103;FS=5.972;HaplotypeScore=57.2084;MLEAC=1;MLEAF=0.500;MQ=48.25;MQ0=10;MQRankSum=7.492;QD=7.06;ReadPosRankSum=2.317;SOR=1.209 GT:AD:DP:GQ:PL 0/1:131,75:206:99:1482,0,2144
CP000253.1 454338 . G C 1551.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.147;DP=187;Dels=0.00;ExcessHet=3.0103;FS=6.319;HaplotypeScore=91.2387;MLEAC=1;MLEAF=0.500;MQ=47.84;MQ0=10;MQRankSum=-8.047;QD=8.53;ReadPosRankSum=0.094;SOR=0.375 GT:AD:DP:GQ:PL 0/1:78,104:187:99:1580,0,1808
CP000253.1 454341 . T A 1161.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.058;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=67.5114;MLEAC=1;MLEAF=0.500;MQ=47.84;MQ0=10;MQRankSum=-3.148;QD=6.28;ReadPosRankSum=2.188;SOR=0.770 GT:AD:DP:GQ:PL 0/1:113,72:187:99:1190,0,2264
CP000253.1 454348 . T A,C 3694.77 . AC=1,1;AF=0.500,0.500;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1301;MLEAC=1,1;MLEAF=0.500,0.500;MQ=47.54;MQ0=10;QD=20.30;SOR=1.165 GT:AD:DP:GQ:PL 1/2:0,82,100:183:99:3723,2316,2205,1407,0,1226
CP000253.1 454379 . T C 1008.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.039;DP=144;Dels=0.00;ExcessHet=3.0103;FS=5.326;HaplotypeScore=42.6558;MLEAC=1;MLEAF=0.500;MQ=49.93;MQ0=3;MQRankSum=-8.912;QD=7.10;ReadPosRankSum=1.504;SOR=0.373 GT:AD:DP:GQ:PL 0/1:73,69:144:99:1037,0,1716
CP000253.1 454382 . A G 990.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.983;DP=143;Dels=0.00;ExcessHet=3.0103;FS=3.124;HaplotypeScore=44.3090;MLEAC=1;MLEAF=0.500;MQ=49.88;MQ0=3;MQRankSum=-8.798;QD=6.98;ReadPosRankSum=0.892;SOR=0.475 GT:AD:DP:GQ:PL 0/1:75,67:143:99:1019,0,1769
CP000253.1 454389 . A G 808.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.530;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.2745;MLEAC=1;MLEAF=0.500;MQ=49.96;MQ0=3;MQRankSum=-5.505;QD=5.99;ReadPosRankSum=1.718;SOR=0.695 GT:AD:DP:GQ:PL 0/1:84,51:135:99:837,0,1907
CP000253.1 454392 . A G 1030.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.884;DP=134;Dels=0.00;ExcessHet=3.0103;FS=6.258;HaplotypeScore=37.7288;MLEAC=1;MLEAF=0.500;MQ=50.04;MQ0=3;MQRankSum=-9.354;QD=7.69;ReadPosRankSum=-0.281;SOR=0.327 GT:AD:DP:GQ:PL 0/1:66,68:134:99:1059,0,1612
CP000253.1 455757 . C T 2490.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1490;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2519,178,0
CP000253.1 457691 . A G 1818.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1847,129,0
CP000253.1 457805 . G A 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 457880 . T C 532.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:39:561,39,0
CP000253.1 459092 . T A 4761.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.199;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.8333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.23;ReadPosRankSum=-1.300;SOR=0.703 GT:AD:DP:GQ:PL 1/1:2,203:205:99:4790,298,0
CP000253.1 459579 . T A 816.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:60:845,60,0
CP000253.1 459702 . A G 1548.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:65:99:1577,111,0
CP000253.1 460119 . C T 3511.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3540,250,0
CP000253.1 460137 . G T 3039.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.990;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.56;ReadPosRankSum=-0.578;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,128:129:99:3068,214,0
CP000253.1 460212 . A G 1853.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9395;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1882,132,0
CP000253.1 460335 . A C 896.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1158;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:38:69:925,69,0
CP000253.1 460715 . A G 4172.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1002;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,168:169:99:4201,295,0
CP000253.1 461851 . C T 6717.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.1939;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.53;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,244:250:99:6746,500,0
CP000253.1 462664 . C T 6640.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.5699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.90;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,238:239:99:6669,482,0
CP000253.1 463000 . T A 6659.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,238:238:99:6688,482,0
CP000253.1 463180 . T A 5582.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8467;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.50;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,203:204:99:5611,403,0
CP000253.1 463233 . A C 6006.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.67;ReadPosRankSum=-0.170;SOR=0.404 GT:AD:DP:GQ:PL 1/1:1,233:234:99:6035,427,0
CP000253.1 463337 . A G 6348.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3047;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6377,451,0
CP000253.1 463943 . T C 5491.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.764;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7654;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.27;ReadPosRankSum=1.439;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,235:238:99:5520,382,0
CP000253.1 464344 . T C 2050.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2079,144,0
CP000253.1 464593 . G A 1084.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1113,78,0
CP000253.1 464600 . G C 1566.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1595,114,0
CP000253.1 464608 . G A 2210.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2246;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2239,160,0
CP000253.1 465053 . T C 4108.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9032;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4137,286,0
CP000253.1 465387 . C T 1333.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1362,99,0
CP000253.1 465396 . A G 1157.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8636;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:45:84:1186,84,0
CP000253.1 465480 . A T 1313.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:53:96:1342,96,0
CP000253.1 465570 . T C 1966.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:85:99:1995,138,0
CP000253.1 465633 . G A 2112.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5140;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2141,147,0
CP000253.1 465732 . G A 2144.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6421;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2173,150,0
CP000253.1 466158 . T C 2243.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2272,157,0
CP000253.1 466487 . A G 342.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:27:371,27,0
CP000253.1 467169 . C T 2096.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2125,150,0
CP000253.1 467322 . T C 3017.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4768;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3046,217,0
CP000253.1 467520 . T G 1692.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.431;DP=67;Dels=0.00;ExcessHet=3.0103;FS=3.979;HaplotypeScore=9.6121;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.27;ReadPosRankSum=0.424;SOR=0.955 GT:AD:DP:GQ:PL 1/1:2,65:67:99:1721,101,0
CP000253.1 467746 . G A 1752.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1781,123,0
CP000253.1 467938 . A G 4239.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5010;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4268,298,0
CP000253.1 468187 . A G 4994.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.777;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.78;ReadPosRankSum=0.223;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,209:212:99:5023,352,0
CP000253.1 468582 . A G 1858.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8234;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1887,132,0
CP000253.1 468590 . A G 1687.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8318;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1716,120,0
CP000253.1 468591 . C A 1750.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8318;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1779,123,0
CP000253.1 468593 . T A 1769.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1798,126,0
CP000253.1 469342 . T G 23.79 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;DP=11;Dels=0.00;ExcessHet=3.0103;FS=3.522;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=2.16;ReadPosRankSum=-1.922;SOR=2.233 GT:AD:DP:GQ:PL 0/1:9,2:11:52:52,0,213
CP000253.1 469794 . G A 3439.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.722;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=-0.414;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,137:140:99:3468,247,0
CP000253.1 469909 . T A 4389.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4418,313,0
CP000253.1 469928 . C T 4366.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4395,313,0
CP000253.1 470216 . C G 4301.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,168:169:99:4330,310,0
CP000253.1 470356 . A T 3981.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=1.427;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,158:160:99:4010,286,0
CP000253.1 470537 . G T 3682.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.853;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3028;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.40;ReadPosRankSum=1.721;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,144:146:99:3711,265,0
CP000253.1 471619 . C T 5215.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,210:213:99:5244,370,0
CP000253.1 472647 . C T 3587.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.108 GT:AD:DP:GQ:PL 1/1:0,141:142:99:3616,256,0
CP000253.1 472713 . A T 2901.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2930,205,0
CP000253.1 472993 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 473100 . G A 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 473311 . C A 484.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:513,36,0
CP000253.1 473359 . T A 513.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:542,39,0
CP000253.1 474330 . G C 5868.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4383;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.923 GT:AD:DP:GQ:PL 1/1:0,239:243:99:5897,418,0
CP000253.1 474367 . G A 6253.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7765;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6282,442,0
CP000253.1 474423 . C T 4807.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.964 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4836,340,0
CP000253.1 474426 . C A 4721.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5998;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,185:187:99:4750,334,0
CP000253.1 474444 . A G 4667.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2201;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.31;ReadPosRankSum=1.642;SOR=0.587 GT:AD:DP:GQ:PL 1/1:1,191:194:99:4696,328,0
CP000253.1 474499 . T C 4143.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7901;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=1.017 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4172,292,0
CP000253.1 474567 . C T 3010.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3039,214,0
CP000253.1 474921 . T C 2873.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9669;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.17;SOR=1.519 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2902,211,0
CP000253.1 474930 . C T 3281.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.05;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,117:119:99:3310,238,0
CP000253.1 474957 . C T 3387.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.119;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3379;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.47;ReadPosRankSum=1.553;SOR=0.839 GT:AD:DP:GQ:PL 1/1:1,132:134:99:3416,241,0
CP000253.1 475443 . T A 4391.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4420,313,0
CP000253.1 475731 . G A 3741.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4122;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.988 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3770,265,0
CP000253.1 475845 . T G 3093.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=1.169 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3122,220,0
CP000253.1 475884 . A G 2763.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7784;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=27.64;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2792,199,0
CP000253.1 476091 . G C 2657.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2686,193,0
CP000253.1 476919 . C T 1264.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.013;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.32;ReadPosRankSum=1.069;SOR=0.669 GT:AD:DP:GQ:PL 1/1:1,51:52:90:1293,90,0
CP000253.1 477207 . T C 3690.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2394;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,163:164:99:3719,253,0
CP000253.1 477328 . C T 2696.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3389;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2725,187,0
CP000253.1 477463 . A G 1231.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.606;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3762;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.24;ReadPosRankSum=-1.376;SOR=0.467 GT:AD:DP:GQ:PL 1/1:1,52:53:90:1260,90,0
CP000253.1 477548 . G A 1573.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1602,111,0
CP000253.1 477574 . T A 1756.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1395;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1785,126,0
CP000253.1 477859 . C T 4919.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.9879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.24;ReadPosRankSum=-1.092;SOR=0.266 GT:AD:DP:GQ:PL 1/1:1,202:206:99:4948,346,0
CP000253.1 478306 . A T 2023.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.993;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.68;ReadPosRankSum=1.375;SOR=0.502 GT:AD:DP:GQ:PL 1/1:1,81:82:99:2052,144,0
CP000253.1 478496 . T C 2676.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2705,187,0
CP000253.1 478595 . A T 2558.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2587,178,0
CP000253.1 478930 . A G 4157.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4186,289,0
CP000253.1 478952 . T A 4422.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2492;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4451,307,0
CP000253.1 478953 . T C 4281.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.070;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3551;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.14;ReadPosRankSum=2.092;SOR=0.749 GT:AD:DP:GQ:PL 1/1:2,183:185:99:4310,262,0
CP000253.1 479103 . G T 5556.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.040;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5772;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.48;ReadPosRankSum=0.657;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,226:227:99:5585,388,0
CP000253.1 479195 . C T 4770.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4604;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4799,337,0
CP000253.1 479535 . A T 3925.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1838;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3954,277,0
CP000253.1 479899 . G T 1752.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.031;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4865;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.12;ReadPosRankSum=-0.268;SOR=0.110 GT:AD:DP:GQ:PL 1/1:2,81:84:99:1781,126,0
CP000253.1 480158 . T C 3162.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=1.027 GT:AD:DP:GQ:PL 1/1:0,129:134:99:3191,232,0
CP000253.1 480268 . C T 4091.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,155:155:99:4120,292,0
CP000253.1 480888 . A G 3985.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,163:164:99:4014,283,0
CP000253.1 481107 . A T 1948.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4116;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,78:79:99:1977,141,0
CP000253.1 481508 . C T 2169.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2198,151,0
CP000253.1 481706 . A G 1109.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1138,81,0
CP000253.1 481860 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 482310 . A T 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 485549 . G A 170.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:15:199,15,0
CP000253.1 485574 . G A 117.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:145,12,0
CP000253.1 485683 . T A 293.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:322,24,0
CP000253.1 485755 . A G 1444.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=1.238 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1473,105,0
CP000253.1 486046 . G A 3550.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.029;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.01;ReadPosRankSum=0.366;SOR=0.253 GT:AD:DP:GQ:PL 1/1:1,141:142:99:3579,253,0
CP000253.1 486070 . G A 3821.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8424;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3850,271,0
CP000253.1 486974 . T C 5457.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,215:219:99:5486,388,0
CP000253.1 487175 . G A 5912.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.5453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,227:228:99:5941,427,0
CP000253.1 487773 . T A 276.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.737;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.77;ReadPosRankSum=1.242;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,13:14:21:305,21,0
CP000253.1 487818 . T C 303.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:332,24,0
CP000253.1 487852 . C T 317.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:346,24,0
CP000253.1 487868 . A C 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 488003 . T A 3417.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.59;ReadPosRankSum=0.898;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,138:139:99:3446,241,0
CP000253.1 488096 . T A 5995.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5865;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6024,421,0
CP000253.1 488111 . A C 6130.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1906;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6159,433,0
CP000253.1 488984 . G A 6771.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.723;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.31;ReadPosRankSum=1.015;SOR=0.134 GT:AD:DP:GQ:PL 1/1:2,246:249:99:6800,488,0
CP000253.1 489162 . A G 6333.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.959;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2672;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.96;ReadPosRankSum=1.392;SOR=0.233 GT:AD:DP:GQ:PL 1/1:1,243:244:99:6362,451,0
CP000253.1 489580 . T G 359.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:388,27,0
CP000253.1 489634 . T A 324.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:353,24,0
CP000253.1 489728 . A G 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 490706 . A C 1682.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1711,123,0
CP000253.1 490970 . G A 4998.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5027,346,0
CP000253.1 491072 . A G 3826.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6266;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3855,274,0
CP000253.1 491393 . A G 4287.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.945;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9341;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.18;ReadPosRankSum=1.517;SOR=0.232 GT:AD:DP:GQ:PL 1/1:1,184:187:99:4316,301,0
CP000253.1 491516 . C T 4666.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,198:199:99:4695,325,0
CP000253.1 491537 . A G 4595.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7499;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,197:197:99:4624,319,0
CP000253.1 491622 . C T 3280.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,136:137:99:3309,232,0
CP000253.1 491688 . G A 2244.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0511;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2273,157,0
CP000253.1 491923 . G A 726.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.07;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:25:54:755,54,0
CP000253.1 492053 . T C 1914.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1943,135,0
CP000253.1 492057 . T A 1914.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1943,135,0
CP000253.1 492106 . G A 2191.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2220,154,0
CP000253.1 492132 . A G 2312.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8486;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.969 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2341,163,0
CP000253.1 492893 . C T 3102.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8991;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3131,223,0
CP000253.1 493174 . C T 639.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=18.44;MQ0=168;QD=3.39;SOR=2.303 GT:AD:DP:GQ:PL 1/1:132,57:190:48:668,48,0
CP000253.1 494981 . A C 384.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.031;DP=168;Dels=0.01;ExcessHet=3.0103;FS=4.677;HaplotypeScore=47.6818;MLEAC=1;MLEAF=0.500;MQ=16.48;MQ0=127;MQRankSum=1.973;QD=2.30;ReadPosRankSum=1.698;SOR=0.569 GT:AD:DP:GQ:PL 0/1:117,50:167:99:413,0,376
CP000253.1 495005 . T G 364.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.606;DP=169;Dels=0.01;ExcessHet=3.0103;FS=2.709;HaplotypeScore=15.8338;MLEAC=1;MLEAF=0.500;MQ=16.72;MQ0=127;MQRankSum=2.068;QD=2.17;ReadPosRankSum=1.074;SOR=0.346 GT:AD:DP:GQ:PL 0/1:118,50:168:99:393,0,360
CP000253.1 495007 . G A 378.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.901;DP=169;Dels=0.01;ExcessHet=3.0103;FS=2.709;HaplotypeScore=14.2727;MLEAC=1;MLEAF=0.500;MQ=16.72;MQ0=127;MQRankSum=2.068;QD=2.25;ReadPosRankSum=0.458;SOR=0.346 GT:AD:DP:GQ:PL 0/1:117,51:168:99:407,0,294
CP000253.1 495278 . T C 129.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=19.09;MQ0=5;QD=12.99;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,10:10:15:158,15,0
CP000253.1 497999 . A T 1239.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.302;DP=143;Dels=0.00;ExcessHet=3.0103;FS=6.626;HaplotypeScore=43.7050;MLEAC=1;MLEAF=0.500;MQ=38.88;MQ0=44;MQRankSum=-4.700;QD=8.73;ReadPosRankSum=-1.531;SOR=1.708 GT:AD:DP:GQ:PL 0/1:80,62:143:99:1268,0,768
CP000253.1 498000 . T C 723.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.156;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.879;HaplotypeScore=43.7325;MLEAC=1;MLEAF=0.500;MQ=39.59;MQ0=44;MQRankSum=-0.916;QD=4.89;ReadPosRankSum=-1.423;SOR=0.972 GT:AD:DP:GQ:PL 0/1:107,41:148:99:752,0,1415
CP000253.1 498151 . A G 794.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.256;DP=250;Dels=0.00;ExcessHet=3.0103;FS=17.051;HaplotypeScore=70.8456;MLEAC=1;MLEAF=0.500;MQ=52.33;MQ0=2;MQRankSum=-4.634;QD=3.20;ReadPosRankSum=4.400;SOR=1.013 GT:AD:DP:GQ:PL 0/1:195,53:249:99:823,0,4440
CP000253.1 498203 . C T 4215.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.690;DP=240;Dels=0.00;ExcessHet=3.0103;FS=7.846;HaplotypeScore=256.5815;MLEAC=1;MLEAF=0.500;MQ=52.36;MQ0=1;MQRankSum=5.632;QD=17.86;ReadPosRankSum=-1.361;SOR=1.224 GT:AD:DP:GQ:PL 0/1:56,180:240:99:4244,0,908
CP000253.1 498204 . A T 2471.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.007;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=370.5962;MLEAC=1;MLEAF=0.500;MQ=52.36;MQ0=1;MQRankSum=6.528;QD=10.34;ReadPosRankSum=-2.872;SOR=0.665 GT:AD:DP:GQ:PL 0/1:121,118:240:99:2500,0,2758
CP000253.1 498217 . A G 875.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.596;DP=241;Dels=0.00;ExcessHet=3.0103;FS=3.589;HaplotypeScore=212.1601;MLEAC=1;MLEAF=0.500;MQ=52.78;MQ0=1;MQRankSum=-5.475;QD=3.66;ReadPosRankSum=0.071;SOR=0.471 GT:AD:DP:GQ:PL 0/1:185,54:241:99:904,0,4303
CP000253.1 498226 . G A 2864.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.097;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.474;HaplotypeScore=84.5845;MLEAC=1;MLEAF=0.500;MQ=52.87;MQ0=1;MQRankSum=6.961;QD=11.79;ReadPosRankSum=-1.085;SOR=0.630 GT:AD:DP:GQ:PL 0/1:115,128:244:99:2893,0,2657
CP000253.1 498257 . G A 813.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.723;DP=235;Dels=0.00;ExcessHet=3.0103;FS=7.558;HaplotypeScore=33.2802;MLEAC=1;MLEAF=0.500;MQ=52.95;MQ0=1;MQRankSum=-4.475;QD=3.48;ReadPosRankSum=-5.101;SOR=0.556 GT:AD:DP:GQ:PL 0/1:185,49:235:99:842,0,4323
CP000253.1 498266 . A G 5926.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2000;MLEAC=2;MLEAF=1.00;MQ=52.95;MQ0=1;QD=25.88;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,229:231:99:5955,448,0
CP000253.1 498299 . T C 5202.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7702;MLEAC=2;MLEAF=1.00;MQ=52.95;MQ0=1;QD=25.63;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,203:206:99:5231,394,0
CP000253.1 498311 . G A 2667.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.425;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.551;HaplotypeScore=31.5826;MLEAC=1;MLEAF=0.500;MQ=53.12;MQ0=1;MQRankSum=7.365;QD=13.82;ReadPosRankSum=5.044;SOR=0.772 GT:AD:DP:GQ:PL 0/1:74,119:195:99:2696,0,1485
CP000253.1 498352 . T C 115.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.245;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=56.1113;MLEAC=1;MLEAF=0.500;MQ=52.91;MQ0=0;MQRankSum=-5.241;QD=0.82;ReadPosRankSum=-5.040;SOR=0.589 GT:AD:DP:GQ:PL 0/1:126,15:142:99:144,0,3209
CP000253.1 498353 . C T 64.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.667;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=53.4391;MLEAC=1;MLEAF=0.500;MQ=52.86;MQ0=0;MQRankSum=-5.657;QD=0.46;ReadPosRankSum=-5.172;SOR=0.428 GT:AD:DP:GQ:PL 0/1:124,16:141:93:93,0,3259
CP000253.1 498360 . A T 144.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.844;DP=128;Dels=0.00;ExcessHet=3.0103;FS=1.256;HaplotypeScore=48.3579;MLEAC=1;MLEAF=0.500;MQ=52.81;MQ0=0;MQRankSum=-3.912;QD=1.14;ReadPosRankSum=-2.661;SOR=1.130 GT:AD:DP:GQ:PL 0/1:114,13:128:99:173,0,2823
CP000253.1 498361 . G C 378.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.955;DP=123;Dels=0.00;ExcessHet=3.0103;FS=3.765;HaplotypeScore=44.8648;MLEAC=1;MLEAF=0.500;MQ=53.60;MQ0=0;MQRankSum=-7.065;QD=3.08;ReadPosRankSum=-3.951;SOR=1.318 GT:AD:DP:GQ:PL 0/1:100,23:123:99:407,0,2501
CP000253.1 499471 . T C 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 499558 . G A 341.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:370,27,0
CP000253.1 499594 . C T 311.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:340,24,0
CP000253.1 499596 . G T 295.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:324,24,0
CP000253.1 499597 . C T 309.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:338,24,0
CP000253.1 499915 . A G 1423.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1452,102,0
CP000253.1 500251 . T A 3088.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6478;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=1.052 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3117,220,0
CP000253.1 500311 . T C 3459.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3488,244,0
CP000253.1 501421 . C G 5555.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9230;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5584,394,0
CP000253.1 501490 . T C 4259.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4288,307,0
CP000253.1 501716 . C A 506.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:535,39,0
CP000253.1 501733 . A C 739.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:768,54,0
CP000253.1 501773 . G A 1294.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:93:1323,93,0
CP000253.1 501914 . C A 2761.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2790,193,0
CP000253.1 501932 . G A 2914.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,123:123:99:2943,205,0
CP000253.1 502244 . G A 2260.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2289,163,0
CP000253.1 502574 . C T 1252.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1281,90,0
CP000253.1 503279 . C T 4039.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4068,277,0
CP000253.1 503783 . A G 2411.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2440,172,0
CP000253.1 503867 . A C 3263.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3292,229,0
CP000253.1 504387 . C T 6624.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.643;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.173;HaplotypeScore=28.4441;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.04;ReadPosRankSum=0.297;SOR=0.355 GT:AD:DP:GQ:PL 1/1:1,244:250:99:6653,460,0
CP000253.1 504504 . C T 6801.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3801;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.65;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6830,494,0
CP000253.1 504723 . G A 4811.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8002;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4840,340,0
CP000253.1 504924 . A T 2254.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4993;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2283,160,0
CP000253.1 505249 . G A 882.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:63:911,63,0
CP000253.1 505276 . C A 1051.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1080,75,0
CP000253.1 505840 . G A 6091.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5311;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,231:231:99:6120,439,0
CP000253.1 506128 . G A 4529.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.741;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8066;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.03;ReadPosRankSum=-1.369;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,180:182:99:4558,331,0
CP000253.1 507454 . A T 319.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:348,24,0
CP000253.1 509506 . T C 1263.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1292,90,0
CP000253.1 509879 . C T 273.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:302,21,0
CP000253.1 510122 . A G 2076.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2105,144,0
CP000253.1 510230 . C T 349.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:378,27,0
CP000253.1 510281 . G A 661.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:690,48,0
CP000253.1 510285 . T C 661.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:690,48,0
CP000253.1 510293 . A G 714.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:51:743,51,0
CP000253.1 510294 . T C 759.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:54:788,54,0
CP000253.1 510299 . A T 831.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:60:860,60,0
CP000253.1 510323 . A T 1508.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1537,105,0
CP000253.1 510461 . G A 3135.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3164,214,0
CP000253.1 510727 . T C 131.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:159,12,0
CP000253.1 510885 . C T 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 510922 . T C 208.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:237,18,0
CP000253.1 510981 . A T 355.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:384,27,0
CP000253.1 511015 . G T 315.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:344,24,0
CP000253.1 511133 . C T 360.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:389,27,0
CP000253.1 511230 . G T 1454.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1483,102,0
CP000253.1 514273 . G A 4088.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4117,286,0
CP000253.1 515019 . A G 4608.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4637,322,0
CP000253.1 515642 . C T 857.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:36:63:886,63,0
CP000253.1 515782 . T C 2631.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1703;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2660,190,0
CP000253.1 515816 . A G 3602.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0536;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,147:149:99:3631,253,0
CP000253.1 516548 . A G 4249.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1080;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,176:178:99:4278,301,0
CP000253.1 516849 . T C 750.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6927;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,30:30:57:779,57,0
CP000253.1 516858 . C T 643.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:48:672,48,0
CP000253.1 516898 . G T 534.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:23:39:563,39,0
CP000253.1 520340 . C T 2687.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,109:110:99:2716,193,0
CP000253.1 521515 . C T 1633.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.75;ReadPosRankSum=1.681;SOR=0.894 GT:AD:DP:GQ:PL 1/1:1,65:67:99:1662,117,0
CP000253.1 522768 . C T 5089.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3175;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,214:215:99:5118,355,0
CP000253.1 524049 . T C 4518.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.5842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,177:178:99:4547,325,0
CP000253.1 524133 . T A 4606.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.836;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.78;ReadPosRankSum=1.027;SOR=0.355 GT:AD:DP:GQ:PL 1/1:1,171:173:99:4635,337,0
CP000253.1 524172 . G A 4665.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,177:178:99:4694,334,0
CP000253.1 524232 . T A 5899.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.925;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.1263;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.22;ReadPosRankSum=0.839;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,224:225:99:5928,427,0
CP000253.1 524943 . A G 5902.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,226:227:99:5931,433,0
CP000253.1 525384 . T C 4315.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.31;SOR=1.074 GT:AD:DP:GQ:PL 1/1:0,158:159:99:4344,319,0
CP000253.1 526228 . A G 5462.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,213:214:99:5491,394,0
CP000253.1 526855 . T C 4547.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1323;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,187:188:99:4576,322,0
CP000253.1 527188 . C T 3185.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.579;DP=130;Dels=0.00;ExcessHet=3.0103;FS=3.479;HaplotypeScore=8.2243;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.51;ReadPosRankSum=1.400;SOR=0.660 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3214,195,0
CP000253.1 529565 . T A 1806.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1835,129,0
CP000253.1 530675 . C T 3398.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.250;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.10;ReadPosRankSum=-0.297;SOR=0.829 GT:AD:DP:GQ:PL 1/1:2,139:141:99:3427,202,0
CP000253.1 531373 . T A 3970.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,158:159:99:3999,283,0
CP000253.1 532156 . T G 5493.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.79;ReadPosRankSum=1.456;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,212:215:99:5522,391,0
CP000253.1 532690 . T C 4128.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.34;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,151:152:99:4157,301,0
CP000253.1 534244 . C T 3921.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,164:165:99:3950,274,0
CP000253.1 534463 . T C 1924.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1953,138,0
CP000253.1 534594 . G A 523.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:552,39,0
CP000253.1 534764 . T C 380.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:409,30,0
CP000253.1 534826 . T A 575.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:42:604,42,0
CP000253.1 535246 . G A 3123.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1350;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3152,220,0
CP000253.1 535401 . A T 3357.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3386,235,0
CP000253.1 536465 . A G 4327.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8363;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4356,304,0
CP000253.1 536891 . T C 4749.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9939;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,193:195:99:4778,337,0
CP000253.1 537045 . A G 2350.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2379,169,0
CP000253.1 537400 . G T 264.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:293,21,0
CP000253.1 537405 . T A 303.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:332,24,0
CP000253.1 537477 . T A 180.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:209,15,0
CP000253.1 537513 . C T 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 537781 . C A 2658.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.532;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.12;ReadPosRankSum=1.188;SOR=0.822 GT:AD:DP:GQ:PL 1/1:2,113:115:99:2687,190,0
CP000253.1 538516 . G A 647.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:48:676,48,0
CP000253.1 538637 . T G 1805.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1834,126,0
CP000253.1 538751 . G A 1082.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:75:1111,75,0
CP000253.1 538870 . A T 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 538949 . C T 589.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:618,42,0
CP000253.1 539018 . G A 547.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:42:576,42,0
CP000253.1 539120 . G A 679.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0913;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:51:708,51,0
CP000253.1 539356 . C T 1682.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,69:71:99:1711,120,0
CP000253.1 539364 . A G 1722.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2241;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1751,126,0
CP000253.1 539372 . T C 1697.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.441;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6164;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.34;ReadPosRankSum=-1.543;SOR=0.804 GT:AD:DP:GQ:PL 1/1:2,74:76:85:1726,85,0
CP000253.1 539408 . A G 2622.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6157;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2651,190,0
CP000253.1 539677 . A C 2849.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.606;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.36;ReadPosRankSum=-0.158;SOR=0.710 GT:AD:DP:GQ:PL 1/1:2,115:118:99:2878,205,0
CP000253.1 540101 . C T 1538.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3614;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1567,108,0
CP000253.1 540357 . T C 214.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:243,18,0
CP000253.1 540443 . T C 472.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:36:501,36,0
CP000253.1 540635 . C T 4046.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3517;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,168:170:99:4075,289,0
CP000253.1 540659 . T C 4270.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0445;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=1.034 GT:AD:DP:GQ:PL 1/1:0,174:175:99:4299,304,0
CP000253.1 540731 . T A 5525.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.817;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3267;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.46;ReadPosRankSum=1.348;SOR=1.096 GT:AD:DP:GQ:PL 1/1:2,215:217:99:5554,364,0
CP000253.1 541193 . T C 3432.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2724;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,152:153:99:3461,238,0
CP000253.1 541262 . C A 2872.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,125:126:99:2901,202,0
CP000253.1 541280 . C T 2904.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8642;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2933,205,0
CP000253.1 541542 . T A 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 541707 . G A 54.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:82,6,0
CP000253.1 542145 . T A 2341.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7962;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:102:99:2370,163,0
CP000253.1 542295 . A G 1604.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.20;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1633,117,0
CP000253.1 542409 . T A 1962.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.89;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1991,141,0
CP000253.1 542493 . C T 3457.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9064;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3486,241,0
CP000253.1 542514 . C A 3539.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3568,244,0
CP000253.1 542892 . C T 181.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:210,15,0
CP000253.1 543524 . C T 5889.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=1.076 GT:AD:DP:GQ:PL 1/1:0,237:238:99:5918,418,0
CP000253.1 543844 . A T 252.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:21:281,21,0
CP000253.1 543845 . A G 262.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.20;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:21:291,21,0
CP000253.1 543854 . A G 231.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:18:260,18,0
CP000253.1 543958 . T C 937.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:66:966,66,0
CP000253.1 544178 . A T 1351.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1380,96,0
CP000253.1 544415 . G A 1272.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.94;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:90:1301,90,0
CP000253.1 544892 . A G 97.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.21;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:125,9,0
CP000253.1 546553 . A T 2598.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,107:108:99:2627,184,0
CP000253.1 546560 . T G 2598.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4380;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2627,184,0
CP000253.1 547440 . T G 124.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:152,12,0
CP000253.1 547514 . T A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 547591 . T G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 547608 . C G 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 547973 . A G 3290.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3319,229,0
CP000253.1 548109 . A G 2263.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2292,163,0
CP000253.1 548123 . A C 1849.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.687;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.00;ReadPosRankSum=-1.405;SOR=0.310 GT:AD:DP:GQ:PL 1/1:1,73:74:99:1878,135,0
CP000253.1 548207 . G A 1226.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:50:90:1255,90,0
CP000253.1 548209 . T C 1330.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1359,96,0
CP000253.1 548244 . C A 1622.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1651,117,0
CP000253.1 548249 . A G 1700.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1729,123,0
CP000253.1 548324 . T A 1798.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.229;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.48;ReadPosRankSum=0.879;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,78:80:88:1827,88,0
CP000253.1 548326 . A G 1832.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.91;ReadPosRankSum=0.455;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,79:80:99:1861,129,0
CP000253.1 548329 . T C 1972.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6814;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2001,138,0
CP000253.1 548335 . C T 2249.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8938;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2278,157,0
CP000253.1 548363 . C A 2371.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2400,166,0
CP000253.1 548365 . G A 2299.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2328,163,0
CP000253.1 548368 . T A 2332.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2361,166,0
CP000253.1 548371 . T A 2305.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.955;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.29;ReadPosRankSum=1.681;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,98:99:99:2334,160,0
CP000253.1 548374 . T A 2321.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2350,166,0
CP000253.1 548377 . A T 2400.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2429,169,0
CP000253.1 548422 . A G 2524.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.053;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.16;ReadPosRankSum=-1.049;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,108:109:99:2553,178,0
CP000253.1 548497 . A T 2079.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2108,147,0
CP000253.1 548500 . A T 2056.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2085,147,0
CP000253.1 548569 . T C 973.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=1.483 GT:AD:DP:GQ:PL 1/1:0,35:35:72:1002,72,0
CP000253.1 548577 . C A 638.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.03;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,22:22:48:667,48,0
CP000253.1 548584 . C T 631.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.47;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:48:660,48,0
CP000253.1 548593 . A G 606.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:45:635,45,0
CP000253.1 548608 . C T 614.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:643,45,0
CP000253.1 548623 . T C 659.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:48:688,48,0
CP000253.1 548635 . A C 647.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:48:676,48,0
CP000253.1 548653 . T C 664.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:693,51,0
CP000253.1 548669 . A G 732.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:54:761,54,0
CP000253.1 548692 . A T 722.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:54:751,54,0
CP000253.1 548734 . C T 426.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:455,33,0
CP000253.1 548735 . G A 471.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:36:500,36,0
CP000253.1 548740 . A T 421.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:33:450,33,0
CP000253.1 548741 . A G 432.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.05;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:33:461,33,0
CP000253.1 548762 . A C 508.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:39:537,39,0
CP000253.1 548769 . C G 432.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.05;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:33:461,33,0
CP000253.1 548770 . A T 391.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:30:420,30,0
CP000253.1 548775 . C A 391.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:30:420,30,0
CP000253.1 548776 . G A 390.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:30:419,30,0
CP000253.1 548785 . A G 384.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:30:413,30,0
CP000253.1 548794 . C T 379.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:30:408,30,0
CP000253.1 548803 . C T 389.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.84;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:30:418,30,0
CP000253.1 548815 . A G 416.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:33:445,33,0
CP000253.1 548818 . G A 506.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.15;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:19:39:535,39,0
CP000253.1 548832 . C T 559.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:588,42,0
CP000253.1 548833 . A T 555.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:584,42,0
CP000253.1 548854 . T G 562.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:42:591,42,0
CP000253.1 548857 . A C 566.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:42:595,42,0
CP000253.1 548863 . T A 533.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:562,39,0
CP000253.1 548867 . C G 556.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:585,42,0
CP000253.1 548872 . G A 525.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.91;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:554,39,0
CP000253.1 548878 . T A 579.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:608,42,0
CP000253.1 548881 . T A 580.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:609,42,0
CP000253.1 548893 . A T 661.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:690,48,0
CP000253.1 548909 . A G 667.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:696,48,0
CP000253.1 548914 . A T 670.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:699,48,0
CP000253.1 548974 . T A 782.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7286;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:57:811,57,0
CP000253.1 549003 . A G 747.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:54:776,54,0
CP000253.1 549037 . A G 682.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:711,51,0
CP000253.1 549040 . A G 642.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.16;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:671,48,0
CP000253.1 549043 . T G 701.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.905;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.20;ReadPosRankSum=-1.317;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,28:29:51:730,51,0
CP000253.1 549049 . C A 699.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:728,51,0
CP000253.1 549056 . A T 731.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:760,54,0
CP000253.1 549061 . A T 692.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:51:721,51,0
CP000253.1 549064 . C T 650.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:679,48,0
CP000253.1 549068 . A T 651.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:27:48:680,48,0
CP000253.1 549070 . A T 695.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:51:724,51,0
CP000253.1 549073 . C T 679.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:51:708,51,0
CP000253.1 549076 . C T 659.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:688,48,0
CP000253.1 549077 . A G 689.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:51:718,51,0
CP000253.1 549085 . A G 1919.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1948,138,0
CP000253.1 549136 . A G 2390.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2419,172,0
CP000253.1 549157 . C A 2285.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=93.6206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=1.030 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2314,163,0
CP000253.1 549173 . T A 2222.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.118;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=92.3710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.55;ReadPosRankSum=-1.017;SOR=0.389 GT:AD:DP:GQ:PL 1/1:1,86:88:99:2251,131,0
CP000253.1 549174 . A G 2191.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=87.7862;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.91;ReadPosRankSum=-0.359;SOR=0.800 GT:AD:DP:GQ:PL 1/1:1,87:88:99:2220,157,0
CP000253.1 549187 . T C 2817.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.08;ReadPosRankSum=0.283;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,116:117:99:2846,199,0
CP000253.1 549220 . T A 2823.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2852,199,0
CP000253.1 549247 . A T 233.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.193;DP=145;Dels=0.00;ExcessHet=3.0103;FS=1.952;HaplotypeScore=8.7116;MLEAC=1;MLEAF=0.500;MQ=59.59;MQ0=0;MQRankSum=-4.227;QD=1.61;ReadPosRankSum=-5.893;SOR=0.627 GT:AD:DP:GQ:PL 0/1:124,21:145:99:262,0,2727
CP000253.1 549285 . A T 220.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.233;DP=161;Dels=0.00;ExcessHet=3.0103;FS=6.185;HaplotypeScore=10.7076;MLEAC=1;MLEAF=0.500;MQ=59.48;MQ0=0;MQRankSum=-5.351;QD=1.37;ReadPosRankSum=-0.654;SOR=1.023 GT:AD:DP:GQ:PL 0/1:141,20:161:99:249,0,3210
CP000253.1 549286 . A C 215.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.602;DP=161;Dels=0.00;ExcessHet=3.0103;FS=6.185;HaplotypeScore=11.6017;MLEAC=1;MLEAF=0.500;MQ=59.48;MQ0=0;MQRankSum=-5.351;QD=1.34;ReadPosRankSum=-0.592;SOR=1.023 GT:AD:DP:GQ:PL 0/1:141,20:161:99:244,0,3188
CP000253.1 549295 . C T 231.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.357;DP=161;Dels=0.00;ExcessHet=3.0103;FS=4.715;HaplotypeScore=13.5124;MLEAC=1;MLEAF=0.500;MQ=59.48;MQ0=0;MQRankSum=-5.313;QD=1.46;ReadPosRankSum=-0.205;SOR=1.008 GT:AD:DP:GQ:PL 0/1:139,20:161:99:260,0,3157
CP000253.1 549468 . T C 4407.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2222;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4436,310,0
CP000253.1 549742 . T C 676.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.859;DP=245;Dels=0.00;ExcessHet=3.0103;FS=1.299;HaplotypeScore=19.5679;MLEAC=1;MLEAF=0.500;MQ=58.81;MQ0=0;MQRankSum=-9.240;QD=2.77;ReadPosRankSum=-6.335;SOR=0.638 GT:AD:DP:GQ:PL 0/1:199,45:245:99:705,0,4610
CP000253.1 549760 . C T 894.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.189;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6264;MLEAC=1;MLEAF=0.500;MQ=58.68;MQ0=0;MQRankSum=-8.259;QD=3.76;ReadPosRankSum=-5.463;SOR=0.653 GT:AD:DP:GQ:PL 0/1:183,55:240:99:923,0,4302
CP000253.1 549769 . A G 6063.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.9214;MLEAC=2;MLEAF=1.00;MQ=58.67;MQ0=0;QD=25.37;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,239:239:99:6092,433,0
CP000253.1 549773 . G A 1044.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.426;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5280;MLEAC=1;MLEAF=0.500;MQ=58.56;MQ0=0;MQRankSum=-8.466;QD=4.35;ReadPosRankSum=-3.267;SOR=0.673 GT:AD:DP:GQ:PL 0/1:182,58:240:99:1073,0,4319
CP000253.1 549778 . C T 4320.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.875;DP=250;Dels=0.00;ExcessHet=3.0103;FS=1.780;HaplotypeScore=20.4274;MLEAC=1;MLEAF=0.500;MQ=58.56;MQ0=0;MQRankSum=8.326;QD=17.35;ReadPosRankSum=3.008;SOR=0.741 GT:AD:DP:GQ:PL 0/1:64,185:250:99:4349,0,1128
CP000253.1 549784 . T A 1335.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.043;DP=250;Dels=0.00;ExcessHet=3.0103;FS=2.432;HaplotypeScore=19.4278;MLEAC=1;MLEAF=0.500;MQ=58.56;MQ0=0;MQRankSum=-7.905;QD=5.36;ReadPosRankSum=-2.254;SOR=0.687 GT:AD:DP:GQ:PL 0/1:180,69:250:99:1364,0,4176
CP000253.1 549910 . C T 2463.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.064;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2561;MLEAC=1;MLEAF=0.500;MQ=56.26;MQ0=1;MQRankSum=2.372;QD=11.68;ReadPosRankSum=-5.817;SOR=0.613 GT:AD:DP:GQ:PL 0/1:105,106:213:99:2492,0,2342
CP000253.1 549922 . T G 5336.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.626;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.9780;MLEAC=2;MLEAF=1.00;MQ=55.77;MQ0=1;MQRankSum=3.864;QD=25.66;ReadPosRankSum=2.952;SOR=0.853 GT:AD:DP:GQ:PL 1/1:3,205:216:99:5365,370,0
CP000253.1 549943 . T C 2072.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.611;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=51.9827;MLEAC=1;MLEAF=0.500;MQ=54.98;MQ0=1;MQRankSum=-0.195;QD=9.73;ReadPosRankSum=4.016;SOR=0.764 GT:AD:DP:GQ:PL 0/1:114,99:215:99:2101,0,2518
CP000253.1 549949 . C T 2069.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.465;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.547;HaplotypeScore=70.6576;MLEAC=1;MLEAF=0.500;MQ=54.69;MQ0=1;MQRankSum=0.137;QD=9.86;ReadPosRankSum=3.634;SOR=0.779 GT:AD:DP:GQ:PL 0/1:112,98:213:99:2098,0,2348
CP000253.1 549955 . T C 2144.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.455;DP=203;Dels=0.00;ExcessHet=3.0103;FS=1.109;HaplotypeScore=117.9026;MLEAC=1;MLEAF=0.500;MQ=54.41;MQ0=1;MQRankSum=-1.462;QD=10.89;ReadPosRankSum=0.352;SOR=0.803 GT:AD:DP:GQ:PL 0/1:93,104:203:99:2173,0,1898
CP000253.1 549964 . C T 2880.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.506;DP=189;Dels=0.00;ExcessHet=3.0103;FS=1.272;HaplotypeScore=173.7047;MLEAC=1;MLEAF=0.500;MQ=54.13;MQ0=1;MQRankSum=3.680;QD=15.57;ReadPosRankSum=-0.224;SOR=0.595 GT:AD:DP:GQ:PL 0/1:53,132:189:99:2909,0,572
CP000253.1 549967 . C T 1740.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.682;DP=190;Dels=0.00;ExcessHet=3.0103;FS=1.236;HaplotypeScore=179.7222;MLEAC=1;MLEAF=0.500;MQ=54.00;MQ0=1;MQRankSum=1.103;QD=9.26;ReadPosRankSum=1.745;SOR=0.870 GT:AD:DP:GQ:PL 0/1:99,89:190:99:1769,0,2102
CP000253.1 549985 . T C 1585.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.104;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=551.9543;MLEAC=1;MLEAF=0.500;MQ=52.17;MQ0=3;MQRankSum=1.490;QD=9.61;ReadPosRankSum=1.818;SOR=0.768 GT:AD:DP:GQ:PL 0/1:94,71:167:99:1614,0,1674
CP000253.1 550003 . C T 1054.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.278;DP=137;Dels=0.01;ExcessHet=3.0103;FS=1.592;HaplotypeScore=166.6394;MLEAC=1;MLEAF=0.500;MQ=50.31;MQ0=4;MQRankSum=3.205;QD=7.99;ReadPosRankSum=-0.538;SOR=0.761 GT:AD:DP:GQ:PL 0/1:78,54:136:99:1083,0,1416
CP000253.1 550012 . C T 1808.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.497;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=156.2112;MLEAC=1;MLEAF=0.500;MQ=49.53;MQ0=4;MQRankSum=2.583;QD=13.60;ReadPosRankSum=0.726;SOR=0.716 GT:AD:DP:GQ:PL 0/1:46,87:136:99:1837,0,641
CP000253.1 550021 . T C 77.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.710;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=165.0809;MLEAC=1;MLEAF=0.500;MQ=49.53;MQ0=4;MQRankSum=0.937;QD=0.58;ReadPosRankSum=-0.227;SOR=0.676 GT:AD:DP:GQ:PL 0/1:119,14:136:99:106,0,2302
CP000253.1 550024 . A G 476.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.092;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.751;HaplotypeScore=123.0160;MLEAC=1;MLEAF=0.500;MQ=49.53;MQ0=4;MQRankSum=-0.794;QD=3.91;ReadPosRankSum=3.405;SOR=0.667 GT:AD:DP:GQ:PL 0/1:87,35:136:99:505,0,1912
CP000253.1 550039 . C T 543.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.744;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=102.6895;MLEAC=1;MLEAF=0.500;MQ=48.17;MQ0=5;MQRankSum=-2.528;QD=4.32;ReadPosRankSum=4.700;SOR=0.990 GT:AD:DP:GQ:PL 0/1:82,44:129:99:572,0,1565
CP000253.1 550045 . C T 872.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.124;DP=116;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=141.5851;MLEAC=1;MLEAF=0.500;MQ=47.15;MQ0=5;MQRankSum=3.379;QD=8.01;ReadPosRankSum=-5.888;SOR=0.703 GT:AD:DP:GQ:PL 0/1:64,45:111:99:901,0,852
CP000253.1 550069 . C T 385.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.116;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.889;HaplotypeScore=86.3257;MLEAC=1;MLEAF=0.500;MQ=43.21;MQ0=5;MQRankSum=-0.828;QD=4.59;ReadPosRankSum=-1.852;SOR=0.804 GT:AD:DP:GQ:PL 0/1:53,31:88:99:414,0,986
CP000253.1 550075 . C T 271.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.576;DP=86;Dels=0.00;ExcessHet=3.0103;FS=1.132;HaplotypeScore=79.0537;MLEAC=1;MLEAF=0.500;MQ=42.82;MQ0=5;MQRankSum=0.121;QD=3.31;ReadPosRankSum=-2.681;SOR=0.791 GT:AD:DP:GQ:PL 0/1:60,22:86:99:300,0,948
CP000253.1 550081 . T C 359.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.285;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=73.1630;MLEAC=1;MLEAF=0.500;MQ=43.90;MQ0=5;MQRankSum=-2.105;QD=4.55;ReadPosRankSum=2.276;SOR=0.999 GT:AD:DP:GQ:PL 0/1:51,28:79:99:388,0,857
CP000253.1 550087 . C T 477.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.847;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.988;HaplotypeScore=58.7072;MLEAC=1;MLEAF=0.500;MQ=43.83;MQ0=5;MQRankSum=-0.144;QD=7.35;ReadPosRankSum=-1.908;SOR=0.724 GT:AD:DP:GQ:PL 0/1:31,34:70:99:506,0,565
CP000253.1 550096 . G A 796.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.206;DP=51;Dels=0.00;ExcessHet=3.0103;FS=4.201;HaplotypeScore=39.7137;MLEAC=1;MLEAF=0.500;MQ=39.45;MQ0=6;MQRankSum=-0.555;QD=15.94;ReadPosRankSum=0.787;SOR=0.185 GT:AD:DP:GQ:PL 0/1:6,44:51:95:825,0,95
CP000253.1 550099 . T C 330.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.580;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.5882;MLEAC=1;MLEAF=0.500;MQ=39.45;MQ0=6;MQRankSum=0.210;QD=6.49;ReadPosRankSum=1.218;SOR=0.910 GT:AD:DP:GQ:PL 0/1:31,20:51:99:359,0,550
CP000253.1 550102 . C T 53.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.526;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=42.2826;MLEAC=1;MLEAF=0.500;MQ=38.93;MQ0=6;MQRankSum=-0.658;QD=1.08;ReadPosRankSum=0.664;SOR=0.473 GT:AD:DP:GQ:PL 0/1:35,15:50:82:82,0,771
CP000253.1 550105 . C T 117.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.301;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.7108;MLEAC=1;MLEAF=0.500;MQ=39.02;MQ0=6;MQRankSum=1.146;QD=2.22;ReadPosRankSum=-1.629;SOR=0.544 GT:AD:DP:GQ:PL 0/1:46,7:53:99:146,0,666
CP000253.1 550111 . C T 247.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.433;DP=51;Dels=0.00;ExcessHet=3.0103;FS=7.356;HaplotypeScore=42.2429;MLEAC=1;MLEAF=0.500;MQ=39.71;MQ0=6;MQRankSum=1.145;QD=4.96;ReadPosRankSum=0.743;SOR=2.080 GT:AD:DP:GQ:PL 0/1:35,15:51:99:276,0,604
CP000253.1 550117 . T C 629.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.775;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9693;MLEAC=1;MLEAF=0.500;MQ=38.81;MQ0=6;MQRankSum=1.268;QD=14.99;ReadPosRankSum=0.209;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,32:42:98:658,0,98
CP000253.1 550123 . T C 105.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.428;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.9674;MLEAC=1;MLEAF=0.500;MQ=38.32;MQ0=6;MQRankSum=1.810;QD=2.86;ReadPosRankSum=-0.071;SOR=0.765 GT:AD:DP:GQ:PL 0/1:30,7:37:99:134,0,460
CP000253.1 550129 . T A 90.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.031;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4835;MLEAC=1;MLEAF=0.500;MQ=36.68;MQ0=6;MQRankSum=-0.737;QD=3.13;ReadPosRankSum=1.846;SOR=0.782 GT:AD:DP:GQ:PL 0/1:16,13:34:99:119,0,283
CP000253.1 550135 . T C 319.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.601;DP=32;Dels=0.00;ExcessHet=3.0103;FS=1.527;HaplotypeScore=23.4138;MLEAC=1;MLEAF=0.500;MQ=37.74;MQ0=5;MQRankSum=0.659;QD=9.99;ReadPosRankSum=-1.627;SOR=1.179 GT:AD:DP:GQ:PL 0/1:19,13:32:99:348,0,229
CP000253.1 550138 . C T 89.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.058;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.2939;MLEAC=1;MLEAF=0.500;MQ=39.47;MQ0=3;MQRankSum=-0.885;QD=3.32;ReadPosRankSum=1.617;SOR=0.732 GT:AD:DP:GQ:PL 0/1:17,10:28:99:118,0,417
CP000253.1 550141 . T C 427.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.873;DP=28;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.1051;MLEAC=1;MLEAF=0.500;MQ=39.47;MQ0=3;MQRankSum=0.117;QD=15.84;ReadPosRankSum=-1.279;SOR=0.892 GT:AD:DP:GQ:PL 0/1:6,21:27:62:456,0,62
CP000253.1 550144 . G A,C 510.77 . AC=1,1;AF=0.500,0.500;AN=2;DP=27;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2200;MLEAC=1,1;MLEAF=0.500,0.500;MQ=40.20;MQ0=2;QD=19.64;SOR=0.859 GT:AD:DP:GQ:PL 1/2:0,15,11:26:89:539,125,89,414,0,405
CP000253.1 550147 . C T 269.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.180;DP=27;Dels=0.00;ExcessHet=3.0103;FS=1.740;HaplotypeScore=33.9655;MLEAC=1;MLEAF=0.500;MQ=40.20;MQ0=2;MQRankSum=-0.727;QD=9.99;ReadPosRankSum=1.859;SOR=0.936 GT:AD:DP:GQ:PL 0/1:10,17:27:99:298,0,256
CP000253.1 550153 . C T 27.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.794;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.2881;MLEAC=1;MLEAF=0.500;MQ=38.17;MQ0=2;MQRankSum=-0.046;QD=1.11;ReadPosRankSum=-2.695;SOR=1.179 GT:AD:DP:GQ:PL 0/1:22,3:25:56:56,0,413
CP000253.1 550156 . T C 197.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.715;DP=22;Dels=0.05;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.7539;MLEAC=1;MLEAF=0.500;MQ=37.75;MQ0=2;MQRankSum=-0.399;QD=9.42;ReadPosRankSum=-0.834;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,15:21:99:226,0,120
CP000253.1 550165 . T A 71.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.449;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.5563;MLEAC=1;MLEAF=0.500;MQ=34.97;MQ0=2;MQRankSum=1.090;QD=3.99;ReadPosRankSum=-0.054;SOR=0.412 GT:AD:DP:GQ:PL 0/1:11,7:20:99:100,0,192
CP000253.1 550192 . T A 68.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1063;MLEAC=1;MLEAF=0.500;MQ=29.51;MQ0=0;MQRankSum=-1.068;QD=9.83;ReadPosRankSum=1.465;SOR=1.108 GT:AD:DP:GQ:PL 0/1:1,6:11:24:97,0,24
CP000253.1 550195 . C T 25.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.026;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2988;MLEAC=1;MLEAF=0.500;MQ=29.51;MQ0=0;MQRankSum=0.192;QD=2.58;ReadPosRankSum=2.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,4:11:52:54,0,52
CP000253.1 550225 . C T 308.18 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.717;DP=24;Dels=0.00;ExcessHet=3.0103;FS=7.726;HaplotypeScore=26.8323;MLEAC=1;MLEAF=0.500;MQ=29.24;MQ0=0;MQRankSum=0.837;QD=13.40;ReadPosRankSum=-1.419;SOR=1.447 GT:AD:DP:GQ:PL 0/1:7,16:24:10:336,0,10
CP000253.1 550234 . T C 51.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.303;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.2939;MLEAC=1;MLEAF=0.500;MQ=28.38;MQ0=2;MQRankSum=-1.763;QD=2.07;ReadPosRankSum=0.811;SOR=0.802 GT:AD:DP:GQ:PL 0/1:16,9:30:80:80,0,262
CP000253.1 550237 . T C 274.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.445;DP=36;Dels=0.00;ExcessHet=3.0103;FS=7.968;HaplotypeScore=32.8628;MLEAC=1;MLEAF=0.500;MQ=29.24;MQ0=2;MQRankSum=2.220;QD=8.08;ReadPosRankSum=-0.304;SOR=1.274 GT:AD:DP:GQ:PL 0/1:18,16:36:99:303,0,199
CP000253.1 550243 . T C 440.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.864;DP=44;Dels=0.00;ExcessHet=3.0103;FS=2.837;HaplotypeScore=36.2366;MLEAC=1;MLEAF=0.500;MQ=30.40;MQ0=3;MQRankSum=1.577;QD=10.02;ReadPosRankSum=0.557;SOR=0.600 GT:AD:DP:GQ:PL 0/1:17,27:44:99:469,0,137
CP000253.1 550249 . C T 71.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.811;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.7063;MLEAC=1;MLEAF=0.500;MQ=30.40;MQ0=3;MQRankSum=-1.933;QD=1.67;ReadPosRankSum=2.036;SOR=0.806 GT:AD:DP:GQ:PL 0/1:31,12:44:99:100,0,448
CP000253.1 550261 . T C 35.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.610;DP=49;Dels=0.00;ExcessHet=3.0103;FS=5.293;HaplotypeScore=29.2909;MLEAC=1;MLEAF=0.500;MQ=30.70;MQ0=3;MQRankSum=-2.044;QD=0.75;ReadPosRankSum=0.889;SOR=1.589 GT:AD:DP:GQ:PL 0/1:38,10:49:64:64,0,659
CP000253.1 550267 . T C 487.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.684;DP=49;Dels=0.00;ExcessHet=3.0103;FS=6.107;HaplotypeScore=31.0369;MLEAC=1;MLEAF=0.500;MQ=30.70;MQ0=3;MQRankSum=1.512;QD=10.16;ReadPosRankSum=-0.836;SOR=0.530 GT:AD:DP:GQ:PL 0/1:19,29:49:99:516,0,180
CP000253.1 550273 . C T 426.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.049;DP=49;Dels=0.00;ExcessHet=3.0103;FS=1.189;HaplotypeScore=40.2196;MLEAC=1;MLEAF=0.500;MQ=30.70;MQ0=3;MQRankSum=1.310;QD=9.08;ReadPosRankSum=-0.208;SOR=0.495 GT:AD:DP:GQ:PL 0/1:17,30:49:99:455,0,171
CP000253.1 550279 . C T 468.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.030;DP=48;Dels=0.00;ExcessHet=3.0103;FS=2.788;HaplotypeScore=37.7110;MLEAC=1;MLEAF=0.500;MQ=30.91;MQ0=3;MQRankSum=1.063;QD=10.19;ReadPosRankSum=-0.331;SOR=0.368 GT:AD:DP:GQ:PL 0/1:14,32:48:99:497,0,170
CP000253.1 550282 . A G 230.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.805;DP=47;Dels=0.00;ExcessHet=3.0103;FS=6.374;HaplotypeScore=32.1705;MLEAC=1;MLEAF=0.500;MQ=31.23;MQ0=3;MQRankSum=2.842;QD=5.02;ReadPosRankSum=-0.765;SOR=0.610 GT:AD:DP:GQ:PL 0/1:26,20:47:99:259,0,341
CP000253.1 550291 . C T 233.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.109;DP=48;Dels=0.00;ExcessHet=3.0103;FS=11.642;HaplotypeScore=26.2956;MLEAC=1;MLEAF=0.500;MQ=31.52;MQ0=3;MQRankSum=-3.214;QD=4.97;ReadPosRankSum=1.783;SOR=1.793 GT:AD:DP:GQ:PL 0/1:29,18:48:99:262,0,534
CP000253.1 550315 . C T 61.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.252;DP=47;Dels=0.00;ExcessHet=3.0103;FS=6.805;HaplotypeScore=57.9217;MLEAC=1;MLEAF=0.500;MQ=31.39;MQ0=2;MQRankSum=-1.351;QD=1.31;ReadPosRankSum=0.463;SOR=2.464 GT:AD:DP:GQ:PL 0/1:36,11:47:90:90,0,523
CP000253.1 550323 . A G 261.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.184;DP=48;Dels=0.00;ExcessHet=3.0103;FS=23.263;HaplotypeScore=42.3714;MLEAC=1;MLEAF=0.500;MQ=32.08;MQ0=2;MQRankSum=-2.564;QD=6.09;ReadPosRankSum=1.149;SOR=2.472 GT:AD:DP:GQ:PL 0/1:23,20:48:99:290,0,386
CP000253.1 550327 . C T 81.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.174;DP=53;Dels=0.00;ExcessHet=3.0103;FS=3.998;HaplotypeScore=43.6567;MLEAC=1;MLEAF=0.500;MQ=32.11;MQ0=3;MQRankSum=-1.082;QD=1.60;ReadPosRankSum=0.884;SOR=2.486 GT:AD:DP:GQ:PL 0/1:40,11:53:99:110,0,656
CP000253.1 550336 . A T 236.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.604;DP=55;Dels=0.00;ExcessHet=3.0103;FS=20.923;HaplotypeScore=70.9811;MLEAC=1;MLEAF=0.500;MQ=31.69;MQ0=3;MQRankSum=2.365;QD=4.74;ReadPosRankSum=0.094;SOR=1.691 GT:AD:DP:GQ:PL 0/1:28,22:55:99:265,0,327
CP000253.1 550339 . T C 472.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.384;DP=54;Dels=0.00;ExcessHet=3.0103;FS=8.090;HaplotypeScore=64.4189;MLEAC=1;MLEAF=0.500;MQ=31.89;MQ0=3;MQRankSum=0.797;QD=8.75;ReadPosRankSum=0.445;SOR=0.424 GT:AD:DP:GQ:PL 0/1:24,30:54:99:501,0,152
CP000253.1 550351 . T C 505.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.733;DP=57;Dels=0.00;ExcessHet=3.0103;FS=11.676;HaplotypeScore=54.1103;MLEAC=1;MLEAF=0.500;MQ=32.57;MQ0=4;MQRankSum=1.801;QD=9.20;ReadPosRankSum=0.932;SOR=0.434 GT:AD:DP:GQ:PL 0/1:24,31:57:99:534,0,194
CP000253.1 550357 . T C 25.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.845;DP=59;Dels=0.00;ExcessHet=3.0103;FS=7.302;HaplotypeScore=36.5767;MLEAC=1;MLEAF=0.500;MQ=32.72;MQ0=4;MQRankSum=1.116;QD=0.44;ReadPosRankSum=-0.033;SOR=2.147 GT:AD:DP:GQ:PL 0/1:47,11:59:54:54,0,731
CP000253.1 550372 . G A 521.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.273;DP=50;Dels=0.00;ExcessHet=3.0103;FS=7.707;HaplotypeScore=34.4124;MLEAC=1;MLEAF=0.500;MQ=33.04;MQ0=4;MQRankSum=1.558;QD=10.87;ReadPosRankSum=-0.028;SOR=0.105 GT:AD:DP:GQ:PL 0/1:11,37:50:99:550,0,116
CP000253.1 550381 . T C 350.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.256;DP=48;Dels=0.00;ExcessHet=3.0103;FS=16.916;HaplotypeScore=38.4276;MLEAC=1;MLEAF=0.500;MQ=32.34;MQ0=4;MQRankSum=-1.738;QD=7.63;ReadPosRankSum=1.287;SOR=0.177 GT:AD:DP:GQ:PL 0/1:17,29:48:99:379,0,260
CP000253.1 550387 . C T 110.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.434;DP=50;Dels=0.00;ExcessHet=3.0103;FS=12.378;HaplotypeScore=35.4834;MLEAC=1;MLEAF=0.500;MQ=32.57;MQ0=4;MQRankSum=0.387;QD=2.31;ReadPosRankSum=-0.913;SOR=3.412 GT:AD:DP:GQ:PL 0/1:34,14:50:99:139,0,493
CP000253.1 550393 . T C 31.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.042;DP=50;Dels=0.00;ExcessHet=3.0103;FS=5.497;HaplotypeScore=30.6949;MLEAC=1;MLEAF=0.500;MQ=33.56;MQ0=4;MQRankSum=-1.055;QD=0.64;ReadPosRankSum=-2.038;SOR=1.751 GT:AD:DP:GQ:PL 0/1:40,10:50:60:60,0,546
CP000253.1 550399 . T C 153.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.564;DP=43;Dels=0.02;ExcessHet=3.0103;FS=22.822;HaplotypeScore=24.3501;MLEAC=1;MLEAF=0.500;MQ=34.45;MQ0=4;MQRankSum=-0.398;QD=3.66;ReadPosRankSum=-2.068;SOR=3.361 GT:AD:DP:GQ:PL 0/1:23,19:42:99:182,0,299
CP000253.1 550405 . C T 319.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.175;DP=47;Dels=0.00;ExcessHet=3.0103;FS=4.200;HaplotypeScore=20.4178;MLEAC=1;MLEAF=0.500;MQ=36.47;MQ0=5;MQRankSum=0.309;QD=6.95;ReadPosRankSum=-0.120;SOR=0.120 GT:AD:DP:GQ:PL 0/1:20,26:47:99:348,0,204
CP000253.1 550417 . T C 136.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.516;DP=48;Dels=0.00;ExcessHet=3.0103;FS=10.024;HaplotypeScore=23.0562;MLEAC=1;MLEAF=0.500;MQ=38.28;MQ0=6;MQRankSum=-1.507;QD=2.91;ReadPosRankSum=1.761;SOR=0.036 GT:AD:DP:GQ:PL 0/1:28,19:48:99:165,0,377
CP000253.1 550423 . T C 164.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.638;DP=54;Dels=0.00;ExcessHet=3.0103;FS=12.067;HaplotypeScore=44.2843;MLEAC=1;MLEAF=0.500;MQ=39.62;MQ0=7;MQRankSum=-1.840;QD=3.23;ReadPosRankSum=1.850;SOR=3.912 GT:AD:DP:GQ:PL 0/1:39,12:54:99:193,0,530
CP000253.1 550429 . T C 106.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.569;DP=52;Dels=0.00;ExcessHet=3.0103;FS=11.420;HaplotypeScore=36.0124;MLEAC=1;MLEAF=0.500;MQ=39.91;MQ0=7;MQRankSum=-1.793;QD=2.05;ReadPosRankSum=1.542;SOR=0.277 GT:AD:DP:GQ:PL 0/1:36,16:52:99:135,0,486
CP000253.1 550435 . C T 319.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.163;DP=52;Dels=0.00;ExcessHet=3.0103;FS=14.348;HaplotypeScore=43.2173;MLEAC=1;MLEAF=0.500;MQ=40.89;MQ0=7;MQRankSum=1.747;QD=6.27;ReadPosRankSum=-0.213;SOR=0.042 GT:AD:DP:GQ:PL 0/1:23,28:52:99:348,0,287
CP000253.1 550441 . C T 404.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.684;DP=57;Dels=0.00;ExcessHet=3.0103;FS=6.066;HaplotypeScore=62.3827;MLEAC=1;MLEAF=0.500;MQ=41.27;MQ0=7;MQRankSum=1.671;QD=7.36;ReadPosRankSum=0.876;SOR=0.130 GT:AD:DP:GQ:PL 0/1:23,32:57:99:433,0,253
CP000253.1 550471 . T C 716.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.456;DP=61;Dels=0.03;ExcessHet=3.0103;FS=1.683;HaplotypeScore=31.7482;MLEAC=1;MLEAF=0.500;MQ=43.50;MQ0=6;MQRankSum=3.851;QD=12.15;ReadPosRankSum=-0.422;SOR=1.186 GT:AD:DP:GQ:PL 0/1:20,39:59:99:745,0,192
CP000253.1 550477 . T C 633.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.900;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5738;MLEAC=1;MLEAF=0.500;MQ=45.68;MQ0=6;MQRankSum=3.939;QD=9.46;ReadPosRankSum=-1.692;SOR=0.883 GT:AD:DP:GQ:PL 0/1:29,38:69:99:662,0,349
CP000253.1 550489 . C T 883.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.495;DP=62;Dels=0.02;ExcessHet=3.0103;FS=4.286;HaplotypeScore=34.8940;MLEAC=1;MLEAF=0.500;MQ=47.79;MQ0=3;MQRankSum=4.045;QD=14.98;ReadPosRankSum=-1.905;SOR=2.067 GT:AD:DP:GQ:PL 0/1:16,43:61:37:912,0,37
CP000253.1 550495 . T C 931.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.488;DP=60;Dels=0.00;ExcessHet=3.0103;FS=1.379;HaplotypeScore=81.4211;MLEAC=1;MLEAF=0.500;MQ=48.18;MQ0=2;MQRankSum=2.320;QD=15.79;ReadPosRankSum=-0.607;SOR=1.061 GT:AD:DP:GQ:PL 0/1:12,47:60:24:960,0,24
CP000253.1 550501 . T C 41.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.998;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=175.0271;MLEAC=1;MLEAF=0.500;MQ=48.18;MQ0=2;MQRankSum=-1.881;QD=0.70;ReadPosRankSum=1.410;SOR=0.471 GT:AD:DP:GQ:PL 0/1:49,11:60:70:70,0,913
CP000253.1 550521 . A G 1642.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.408;DP=65;Dels=0.00;ExcessHet=3.0103;FS=5.206;HaplotypeScore=20.6270;MLEAC=2;MLEAF=1.00;MQ=51.47;MQ0=1;MQRankSum=0.976;QD=25.67;ReadPosRankSum=-1.544;SOR=1.768 GT:AD:DP:GQ:PL 1/1:1,63:65:99:1671,120,0
CP000253.1 550525 . C T 1406.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.423;DP=65;Dels=0.00;ExcessHet=3.0103;FS=12.188;HaplotypeScore=11.4390;MLEAC=2;MLEAF=1.00;MQ=51.47;MQ0=1;MQRankSum=2.366;QD=21.64;ReadPosRankSum=1.374;SOR=2.128 GT:AD:DP:GQ:PL 1/1:8,57:65:73:1435,73,0
CP000253.1 550534 . A G 1380.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.967;DP=65;Dels=0.00;ExcessHet=3.0103;FS=8.564;HaplotypeScore=12.7720;MLEAC=2;MLEAF=1.00;MQ=51.77;MQ0=1;MQRankSum=3.493;QD=21.57;ReadPosRankSum=0.242;SOR=2.215 GT:AD:DP:GQ:PL 1/1:5,59:65:75:1409,75,0
CP000253.1 550574 . G A 1680.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7605;MLEAC=2;MLEAF=1.00;MQ=54.59;MQ0=0;QD=28.01;SOR=2.080 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1709,126,0
CP000253.1 550827 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 550838 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 550889 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 550918 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 551140 . G A 1047.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1076,75,0
CP000253.1 551161 . A C 1835.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.880;DP=118;Dels=0.00;ExcessHet=3.0103;FS=4.912;HaplotypeScore=5.3371;MLEAC=1;MLEAF=0.500;MQ=58.00;MQ0=0;MQRankSum=-3.753;QD=15.56;ReadPosRankSum=-10.307;SOR=1.242 GT:AD:DP:GQ:PL 0/1:44,74:118:99:1864,0,885
CP000253.1 551167 . T C 1858.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.451;DP=122;Dels=0.00;ExcessHet=3.0103;FS=4.702;HaplotypeScore=3.5489;MLEAC=1;MLEAF=0.500;MQ=58.07;MQ0=0;MQRankSum=-3.710;QD=15.24;ReadPosRankSum=-9.857;SOR=1.152 GT:AD:DP:GQ:PL 0/1:45,77:122:99:1887,0,918
CP000253.1 551188 . C T 1806.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.211;DP=137;Dels=0.00;ExcessHet=3.0103;FS=3.312;HaplotypeScore=8.5910;MLEAC=1;MLEAF=0.500;MQ=58.28;MQ0=0;MQRankSum=-4.086;QD=13.29;ReadPosRankSum=-5.488;SOR=1.118 GT:AD:DP:GQ:PL 0/1:57,79:137:99:1835,0,1143
CP000253.1 551191 . A T 1846.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.802;DP=142;Dels=0.00;ExcessHet=3.0103;FS=2.243;HaplotypeScore=5.2005;MLEAC=1;MLEAF=0.500;MQ=58.35;MQ0=0;MQRankSum=-4.221;QD=13.01;ReadPosRankSum=-4.247;SOR=0.970 GT:AD:DP:GQ:PL 0/1:62,80:142:99:1875,0,1286
CP000253.1 551194 . G A 1794.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.620;DP=144;Dels=0.00;ExcessHet=3.0103;FS=2.199;HaplotypeScore=4.3683;MLEAC=1;MLEAF=0.500;MQ=58.37;MQ0=0;MQRankSum=-4.285;QD=12.46;ReadPosRankSum=-3.794;SOR=0.979 GT:AD:DP:GQ:PL 0/1:64,80:144:99:1823,0,1275
CP000253.1 551200 . A T 1848.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.527;DP=144;Dels=0.00;ExcessHet=3.0103;FS=3.045;HaplotypeScore=4.4303;MLEAC=1;MLEAF=0.500;MQ=58.37;MQ0=0;MQRankSum=-4.285;QD=12.84;ReadPosRankSum=-3.794;SOR=0.979 GT:AD:DP:GQ:PL 0/1:64,80:144:99:1877,0,1334
CP000253.1 551206 . A G 1853.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.687;DP=147;Dels=0.00;ExcessHet=3.0103;FS=2.984;HaplotypeScore=4.4085;MLEAC=1;MLEAF=0.500;MQ=58.40;MQ0=0;MQRankSum=-4.377;QD=12.61;ReadPosRankSum=-3.157;SOR=0.956 GT:AD:DP:GQ:PL 0/1:67,80:147:99:1882,0,1366
CP000253.1 551221 . A G 1802.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.798;DP=154;Dels=0.00;ExcessHet=3.0103;FS=2.900;HaplotypeScore=9.6402;MLEAC=1;MLEAF=0.500;MQ=58.48;MQ0=0;MQRankSum=-4.119;QD=11.71;ReadPosRankSum=-0.988;SOR=0.966 GT:AD:DP:GQ:PL 0/1:75,79:154:99:1831,0,1517
CP000253.1 551227 . A G 1832.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.241;DP=156;Dels=0.00;ExcessHet=3.0103;FS=3.804;HaplotypeScore=10.5343;MLEAC=1;MLEAF=0.500;MQ=58.50;MQ0=0;MQRankSum=-4.643;QD=11.75;ReadPosRankSum=-0.332;SOR=1.027 GT:AD:DP:GQ:PL 0/1:76,80:156:99:1861,0,1572
CP000253.1 551239 . G A 1842.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.607;DP=160;Dels=0.00;ExcessHet=3.0103;FS=2.822;HaplotypeScore=11.5992;MLEAC=1;MLEAF=0.500;MQ=58.42;MQ0=0;MQRankSum=-4.897;QD=11.52;ReadPosRankSum=1.084;SOR=0.955 GT:AD:DP:GQ:PL 0/1:78,82:160:99:1871,0,1550
CP000253.1 551433 . T C 2256.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2285,163,0
CP000253.1 551568 . C G 2256.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1002;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2285,157,0
CP000253.1 551586 . A T 2351.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2380,163,0
CP000253.1 551647 . C G 1864.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.94;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,85:85:99:1893,129,0
CP000253.1 551700 . A C 1050.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1079,75,0
CP000253.1 551783 . C A 264.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:293,21,0
CP000253.1 551806 . A G 313.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:342,24,0
CP000253.1 551813 . G A 311.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:340,24,0
CP000253.1 551818 . G A 307.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:336,24,0
CP000253.1 551822 . T A 226.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:255,18,0
CP000253.1 551823 . C A 230.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:259,18,0
CP000253.1 551824 . A C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 551833 . G T 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 551834 . G T 222.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:251,18,0
CP000253.1 551896 . A T 273.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:302,21,0
CP000253.1 551898 . A G 275.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:304,21,0
CP000253.1 551902 . T A 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 551904 . A C 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 551905 . A G 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 551908 . C T 271.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:300,21,0
CP000253.1 552157 . T A 308.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:337,24,0
CP000253.1 552161 . C A 315.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:344,24,0
CP000253.1 552169 . A T 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 552178 . T C 315.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:344,24,0
CP000253.1 552196 . T A 352.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.39;MQ0=0;QD=23.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:381,27,0
CP000253.1 552652 . T A 48.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:76,6,0
CP000253.1 553285 . T A 1579.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1608,111,0
CP000253.1 553879 . C T 2838.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,125:126:99:2867,196,0
CP000253.1 554107 . C T 1300.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.671;DP=140;Dels=0.00;ExcessHet=3.0103;FS=2.143;HaplotypeScore=6.9055;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=9.29;ReadPosRankSum=0.482;SOR=0.683 GT:AD:DP:GQ:PL 0/1:77,63:140:99:1329,0,1749
CP000253.1 554146 . T C 1549.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.238;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8097;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.981;SOR=0.769 GT:AD:DP:GQ:PL 0/1:52,66:118:99:1578,0,1191
CP000253.1 554188 . C T 1507.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.806;DP=119;Dels=0.00;ExcessHet=3.0103;FS=1.529;HaplotypeScore=6.2256;MLEAC=1;MLEAF=0.500;MQ=59.98;MQ0=0;MQRankSum=1.096;QD=12.67;ReadPosRankSum=2.336;SOR=0.963 GT:AD:DP:GQ:PL 0/1:55,64:119:99:1536,0,1239
CP000253.1 554232 . C T 1042.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.650;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5771;MLEAC=1;MLEAF=0.500;MQ=59.77;MQ0=0;MQRankSum=-1.668;QD=9.66;ReadPosRankSum=-0.708;SOR=0.700 GT:AD:DP:GQ:PL 0/1:63,45:109:99:1071,0,1538
CP000253.1 554293 . C T 1791.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.795;DP=120;Dels=0.00;ExcessHet=3.0103;FS=1.544;HaplotypeScore=8.1662;MLEAC=1;MLEAF=0.500;MQ=59.14;MQ0=0;MQRankSum=3.719;QD=15.18;ReadPosRankSum=-0.821;SOR=0.528 GT:AD:DP:GQ:PL 0/1:45,73:120:99:1820,0,1051
CP000253.1 554294 . T C 3223.52 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1662;MLEAC=2;MLEAF=1.00;MQ=59.13;MQ0=0;QD=27.09;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3252,238,0
CP000253.1 554296 . C T 1794.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.270;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.722;HaplotypeScore=8.1662;MLEAC=1;MLEAF=0.500;MQ=59.13;MQ0=0;MQRankSum=3.743;QD=15.08;ReadPosRankSum=-0.820;SOR=0.547 GT:AD:DP:GQ:PL 0/1:45,74:119:99:1823,0,1021
CP000253.1 554299 . T C 1794.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.539;DP=121;Dels=0.00;ExcessHet=3.0103;FS=1.530;HaplotypeScore=8.1662;MLEAC=1;MLEAF=0.500;MQ=59.15;MQ0=0;MQRankSum=3.743;QD=15.08;ReadPosRankSum=-0.946;SOR=0.547 GT:AD:DP:GQ:PL 0/1:45,74:121:99:1823,0,1026
CP000253.1 554345 . G A 775.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.713;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7288;MLEAC=1;MLEAF=0.500;MQ=59.25;MQ0=0;MQRankSum=-4.679;QD=5.66;ReadPosRankSum=1.275;SOR=0.761 GT:AD:DP:GQ:PL 0/1:99,38:137:99:804,0,2367
CP000253.1 554364 . T G 642.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.600;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9751;MLEAC=1;MLEAF=0.500;MQ=59.16;MQ0=0;MQRankSum=-4.260;QD=4.66;ReadPosRankSum=0.887;SOR=0.649 GT:AD:DP:GQ:PL 0/1:104,34:139:99:671,0,2474
CP000253.1 554395 . A C 3639.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.815;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0661;MLEAC=2;MLEAF=1.00;MQ=58.98;MQ0=0;MQRankSum=-0.262;QD=25.45;ReadPosRankSum=1.527;SOR=0.459 GT:AD:DP:GQ:PL 1/1:1,142:144:99:3668,271,0
CP000253.1 554413 . C T 421.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.597;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.847;HaplotypeScore=12.3890;MLEAC=1;MLEAF=0.500;MQ=58.94;MQ0=0;MQRankSum=-5.643;QD=3.03;ReadPosRankSum=-3.283;SOR=0.492 GT:AD:DP:GQ:PL 0/1:113,26:139:99:450,0,2852
CP000253.1 554452 . C T 80.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.205;DP=123;Dels=0.00;ExcessHet=3.0103;FS=2.721;HaplotypeScore=12.8411;MLEAC=1;MLEAF=0.500;MQ=58.31;MQ0=0;MQRankSum=-3.012;QD=0.66;ReadPosRankSum=-3.991;SOR=0.545 GT:AD:DP:GQ:PL 0/1:110,13:123:99:109,0,2798
CP000253.1 554482 . C T 2550.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.267;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=82.4634;MLEAC=2;MLEAF=1.00;MQ=58.11;MQ0=0;MQRankSum=3.047;QD=27.14;ReadPosRankSum=1.183;SOR=1.082 GT:AD:DP:GQ:PL 1/1:3,91:94:99:2579,128,0
CP000253.1 554503 . C T 131.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.547;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.1983;MLEAC=1;MLEAF=0.500;MQ=55.26;MQ0=3;MQRankSum=-2.700;QD=1.34;ReadPosRankSum=-5.110;SOR=0.618 GT:AD:DP:GQ:PL 0/1:82,16:99:99:160,0,1982
CP000253.1 554512 . C T 405.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.773;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=43.5186;MLEAC=1;MLEAF=0.500;MQ=53.77;MQ0=3;MQRankSum=-0.923;QD=4.23;ReadPosRankSum=-2.463;SOR=0.628 GT:AD:DP:GQ:PL 0/1:69,27:99:99:434,0,1556
CP000253.1 554515 . C T 387.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.669;DP=100;Dels=0.00;ExcessHet=3.0103;FS=5.183;HaplotypeScore=40.4351;MLEAC=1;MLEAF=0.500;MQ=53.83;MQ0=3;MQRankSum=-2.478;QD=3.96;ReadPosRankSum=-1.838;SOR=1.440 GT:AD:DP:GQ:PL 0/1:69,29:100:99:416,0,1489
CP000253.1 554521 . C T 1208.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.217;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=63.7893;MLEAC=1;MLEAF=0.500;MQ=52.79;MQ0=4;MQRankSum=3.591;QD=11.74;ReadPosRankSum=4.172;SOR=0.717 GT:AD:DP:GQ:PL 0/1:44,59:104:99:1237,0,812
CP000253.1 554527 . C T 112.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.241;DP=108;Dels=0.00;ExcessHet=3.0103;FS=5.133;HaplotypeScore=47.4329;MLEAC=1;MLEAF=0.500;MQ=52.39;MQ0=5;MQRankSum=-2.249;QD=1.05;ReadPosRankSum=-2.392;SOR=1.841 GT:AD:DP:GQ:PL 0/1:95,12:108:99:141,0,1980
CP000253.1 554530 . C T 864.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.019;DP=102;Dels=0.00;ExcessHet=3.0103;FS=1.851;HaplotypeScore=70.3059;MLEAC=1;MLEAF=0.500;MQ=51.91;MQ0=5;MQRankSum=2.944;QD=8.65;ReadPosRankSum=5.329;SOR=0.448 GT:AD:DP:GQ:PL 0/1:58,42:102:99:893,0,924
CP000253.1 554533 . C T 881.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.237;DP=105;Dels=0.00;ExcessHet=3.0103;FS=2.810;HaplotypeScore=69.2344;MLEAC=1;MLEAF=0.500;MQ=51.35;MQ0=6;MQRankSum=3.439;QD=8.64;ReadPosRankSum=5.775;SOR=0.409 GT:AD:DP:GQ:PL 0/1:56,46:105:99:910,0,883
CP000253.1 554539 . C T 348.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.730;DP=109;Dels=0.00;ExcessHet=3.0103;FS=4.657;HaplotypeScore=69.5405;MLEAC=1;MLEAF=0.500;MQ=50.21;MQ0=8;MQRankSum=0.323;QD=3.20;ReadPosRankSum=-2.980;SOR=1.316 GT:AD:DP:GQ:PL 0/1:84,25:109:99:377,0,1552
CP000253.1 554545 . C T 1138.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.246;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=64.5713;MLEAC=1;MLEAF=0.500;MQ=49.84;MQ0=8;MQRankSum=1.028;QD=11.06;ReadPosRankSum=3.392;SOR=0.609 GT:AD:DP:GQ:PL 0/1:46,57:104:99:1167,0,684
CP000253.1 554548 . T C 1202.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.458;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=74.9838;MLEAC=1;MLEAF=0.500;MQ=49.73;MQ0=8;MQRankSum=1.667;QD=11.79;ReadPosRankSum=3.699;SOR=0.869 GT:AD:DP:GQ:PL 0/1:46,56:103:99:1231,0,659
CP000253.1 554551 . T C 143.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.064;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=59.0767;MLEAC=1;MLEAF=0.500;MQ=49.73;MQ0=8;MQRankSum=-2.140;QD=1.41;ReadPosRankSum=1.157;SOR=0.682 GT:AD:DP:GQ:PL 0/1:76,26:103:99:172,0,1499
CP000253.1 554557 . T C 480.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.563;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=68.7200;MLEAC=1;MLEAF=0.500;MQ=48.27;MQ0=8;MQRankSum=-0.009;QD=4.76;ReadPosRankSum=-1.933;SOR=0.669 GT:AD:DP:GQ:PL 0/1:68,33:104:99:509,0,1251
CP000253.1 554563 . C T 37.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.087;DP=101;Dels=0.00;ExcessHet=3.0103;FS=1.369;HaplotypeScore=51.5078;MLEAC=1;MLEAF=0.500;MQ=47.76;MQ0=8;MQRankSum=-0.332;QD=0.38;ReadPosRankSum=-0.386;SOR=1.300 GT:AD:DP:GQ:PL 0/1:83,17:101:66:66,0,1602
CP000253.1 554569 . C T 207.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.767;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=53.7277;MLEAC=1;MLEAF=0.500;MQ=46.45;MQ0=8;MQRankSum=-1.961;QD=2.26;ReadPosRankSum=2.219;SOR=0.520 GT:AD:DP:GQ:PL 0/1:69,23:96:99:236,0,1297
CP000253.1 554575 . T C 1114.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.206;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=71.3651;MLEAC=1;MLEAF=0.500;MQ=44.91;MQ0=9;MQRankSum=1.827;QD=11.86;ReadPosRankSum=-0.891;SOR=0.776 GT:AD:DP:GQ:PL 0/1:37,57:97:99:1143,0,150
CP000253.1 554581 . T C 113.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.053;DP=99;Dels=0.01;ExcessHet=3.0103;FS=7.472;HaplotypeScore=57.2423;MLEAC=1;MLEAF=0.500;MQ=42.86;MQ0=13;MQRankSum=-2.632;QD=1.19;ReadPosRankSum=-0.216;SOR=1.878 GT:AD:DP:GQ:PL 0/1:72,24:98:99:142,0,1194
CP000253.1 554593 . T C 359.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.710;DP=91;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=83.3027;MLEAC=1;MLEAF=0.500;MQ=39.54;MQ0=14;MQRankSum=4.099;QD=4.09;ReadPosRankSum=0.942;SOR=0.674 GT:AD:DP:GQ:PL 0/1:64,24:90:99:388,0,768
CP000253.1 554596 . G A 667.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.459;DP=89;Dels=0.02;ExcessHet=3.0103;FS=3.349;HaplotypeScore=86.0753;MLEAC=1;MLEAF=0.500;MQ=39.46;MQ0=14;MQRankSum=1.331;QD=8.24;ReadPosRankSum=1.394;SOR=0.385 GT:AD:DP:GQ:PL 0/1:39,42:87:99:696,0,452
CP000253.1 554602 . C T 298.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.233;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=85.6923;MLEAC=1;MLEAF=0.500;MQ=38.96;MQ0=15;MQRankSum=1.562;QD=3.18;ReadPosRankSum=1.947;SOR=0.568 GT:AD:DP:GQ:PL 0/1:72,22:95:99:327,0,941
CP000253.1 554605 . T C 439.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.660;DP=98;Dels=0.00;ExcessHet=3.0103;FS=2.336;HaplotypeScore=85.0165;MLEAC=1;MLEAF=0.500;MQ=38.40;MQ0=16;MQRankSum=3.035;QD=4.58;ReadPosRankSum=2.108;SOR=0.329 GT:AD:DP:GQ:PL 0/1:65,31:98:99:468,0,832
CP000253.1 554611 . C T 90.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.031;DP=101;Dels=0.00;ExcessHet=3.0103;FS=3.064;HaplotypeScore=79.7737;MLEAC=1;MLEAF=0.500;MQ=37.88;MQ0=16;MQRankSum=-1.562;QD=0.92;ReadPosRankSum=-1.255;SOR=1.721 GT:AD:DP:GQ:PL 0/1:79,20:101:99:119,0,1384
CP000253.1 554617 . T C 232.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.499;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=56.2333;MLEAC=1;MLEAF=0.500;MQ=37.20;MQ0=16;MQRankSum=-0.716;QD=2.40;ReadPosRankSum=-1.205;SOR=0.675 GT:AD:DP:GQ:PL 0/1:69,28:101:99:261,0,1044
CP000253.1 554623 . C T 135.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.824;DP=100;Dels=0.00;ExcessHet=3.0103;FS=1.171;HaplotypeScore=70.7664;MLEAC=1;MLEAF=0.500;MQ=36.62;MQ0=16;MQRankSum=-0.275;QD=1.39;ReadPosRankSum=-1.205;SOR=0.439 GT:AD:DP:GQ:PL 0/1:78,20:100:99:164,0,1260
CP000253.1 554629 . T C 201.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.124;DP=106;Dels=0.00;ExcessHet=3.0103;FS=5.472;HaplotypeScore=90.8994;MLEAC=1;MLEAF=0.500;MQ=35.31;MQ0=20;MQRankSum=0.460;QD=1.92;ReadPosRankSum=-1.351;SOR=2.413 GT:AD:DP:GQ:PL 0/1:78,27:106:99:230,0,934
CP000253.1 554635 . T C 674.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.726;DP=110;Dels=0.02;ExcessHet=3.0103;FS=4.249;HaplotypeScore=127.4618;MLEAC=1;MLEAF=0.500;MQ=34.42;MQ0=22;MQRankSum=2.444;QD=6.55;ReadPosRankSum=2.168;SOR=0.358 GT:AD:DP:GQ:PL 0/1:59,44:108:99:703,0,553
CP000253.1 554638 . C T 147.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.013;DP=106;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=157.1051;MLEAC=1;MLEAF=0.500;MQ=34.78;MQ0=22;MQRankSum=-0.875;QD=1.51;ReadPosRankSum=-1.853;SOR=0.727 GT:AD:DP:GQ:PL 0/1:75,23:103:99:176,0,1100
CP000253.1 554641 . T C 177.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.537;DP=111;Dels=0.04;ExcessHet=3.0103;FS=2.209;HaplotypeScore=138.1198;MLEAC=1;MLEAF=0.500;MQ=34.76;MQ0=22;MQRankSum=1.293;QD=1.74;ReadPosRankSum=1.144;SOR=0.990 GT:AD:DP:GQ:PL 0/1:78,24:107:99:206,0,1014
CP000253.1 554647 . C T 366.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.343;DP=114;Dels=0.03;ExcessHet=3.0103;FS=0.938;HaplotypeScore=149.5860;MLEAC=1;MLEAF=0.500;MQ=34.58;MQ0=24;MQRankSum=-0.206;QD=3.49;ReadPosRankSum=-2.271;SOR=0.515 GT:AD:DP:GQ:PL 0/1:69,36:111:99:395,0,927
CP000253.1 554653 . C T 533.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.751;DP=115;Dels=0.01;ExcessHet=3.0103;FS=1.071;HaplotypeScore=135.4771;MLEAC=1;MLEAF=0.500;MQ=33.78;MQ0=25;MQRankSum=2.228;QD=5.08;ReadPosRankSum=0.623;SOR=0.481 GT:AD:DP:GQ:PL 0/1:71,34:114:99:562,0,762
CP000253.1 554656 . C T 30.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.256;DP=113;Dels=0.01;ExcessHet=3.0103;FS=1.122;HaplotypeScore=136.1229;MLEAC=1;MLEAF=0.500;MQ=33.77;MQ0=25;MQRankSum=-1.519;QD=0.28;ReadPosRankSum=0.363;SOR=0.894 GT:AD:DP:GQ:PL 0/1:93,18:112:59:59,0,1297
CP000253.1 554659 . C T 184.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.239;DP=113;Dels=0.01;ExcessHet=3.0103;FS=1.228;HaplotypeScore=159.0083;MLEAC=1;MLEAF=0.500;MQ=33.77;MQ0=25;MQRankSum=-2.449;QD=1.71;ReadPosRankSum=1.458;SOR=0.354 GT:AD:DP:GQ:PL 0/1:77,31:112:99:213,0,900
CP000253.1 554665 . T C 28.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.008;DP=115;Dels=0.01;ExcessHet=3.0103;FS=3.847;HaplotypeScore=227.1970;MLEAC=1;MLEAF=0.500;MQ=33.49;MQ0=25;MQRankSum=-1.497;QD=0.25;ReadPosRankSum=0.016;SOR=1.315 GT:AD:DP:GQ:PL 0/1:91,23:114:57:57,0,1175
CP000253.1 554689 . C T 242.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.170;DP=127;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=156.0116;MLEAC=1;MLEAF=0.500;MQ=31.09;MQ0=25;MQRankSum=2.128;QD=2.04;ReadPosRankSum=-1.169;SOR=0.554 GT:AD:DP:GQ:PL 0/1:95,24:126:99:271,0,1202
CP000253.1 554692 . C T 68.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.119;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.868;HaplotypeScore=154.2354;MLEAC=1;MLEAF=0.500;MQ=31.13;MQ0=24;MQRankSum=-2.349;QD=0.57;ReadPosRankSum=0.157;SOR=0.889 GT:AD:DP:GQ:PL 0/1:90,31:125:97:97,0,1142
CP000253.1 554695 . T C 409.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.326;DP=126;Dels=0.00;ExcessHet=3.0103;FS=2.802;HaplotypeScore=117.6044;MLEAC=1;MLEAF=0.500;MQ=31.35;MQ0=24;MQRankSum=0.173;QD=3.30;ReadPosRankSum=-0.213;SOR=1.001 GT:AD:DP:GQ:PL 0/1:83,41:126:99:438,0,793
CP000253.1 554701 . C T 367.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.568;DP=138;Dels=0.00;ExcessHet=3.0103;FS=1.077;HaplotypeScore=148.9872;MLEAC=1;MLEAF=0.500;MQ=31.13;MQ0=25;MQRankSum=0.631;QD=2.85;ReadPosRankSum=1.949;SOR=0.584 GT:AD:DP:GQ:PL 0/1:86,43:138:99:396,0,1010
CP000253.1 554707 . T C 337.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.554;DP=138;Dels=0.00;ExcessHet=3.0103;FS=5.466;HaplotypeScore=132.1056;MLEAC=1;MLEAF=0.500;MQ=31.89;MQ0=24;MQRankSum=-0.055;QD=2.62;ReadPosRankSum=-1.422;SOR=1.125 GT:AD:DP:GQ:PL 0/1:86,43:138:99:366,0,1033
CP000253.1 554710 . C T 50.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.409;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.891;HaplotypeScore=160.3555;MLEAC=1;MLEAF=0.500;MQ=32.14;MQ0=23;MQRankSum=-0.526;QD=0.37;ReadPosRankSum=0.660;SOR=0.849 GT:AD:DP:GQ:PL 0/1:111,25:139:79:79,0,1223
CP000253.1 554719 . C T 276.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.902;DP=157;Dels=0.00;ExcessHet=3.0103;FS=7.658;HaplotypeScore=174.0229;MLEAC=1;MLEAF=0.500;MQ=32.73;MQ0=23;MQRankSum=0.740;QD=1.86;ReadPosRankSum=2.592;SOR=1.177 GT:AD:DP:GQ:PL 0/1:112,37:157:99:305,0,1368
CP000253.1 554725 . C T 686.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.443;DP=153;Dels=0.00;ExcessHet=3.0103;FS=3.211;HaplotypeScore=178.7296;MLEAC=1;MLEAF=0.500;MQ=33.16;MQ0=20;MQRankSum=1.687;QD=4.67;ReadPosRankSum=0.771;SOR=0.741 GT:AD:DP:GQ:PL 0/1:75,72:153:99:715,0,847
CP000253.1 554728 . C T 249.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.837;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=202.8385;MLEAC=1;MLEAF=0.500;MQ=32.51;MQ0=20;MQRankSum=0.048;QD=1.68;ReadPosRankSum=-1.775;SOR=0.615 GT:AD:DP:GQ:PL 0/1:109,40:154:99:278,0,1276
CP000253.1 554731 . C T 318.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.121;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=186.1759;MLEAC=1;MLEAF=0.500;MQ=32.18;MQ0=20;MQRankSum=0.889;QD=2.11;ReadPosRankSum=0.066;SOR=0.672 GT:AD:DP:GQ:PL 0/1:108,43:159:99:347,0,1075
CP000253.1 554737 . T C 333.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.171;DP=167;Dels=0.02;ExcessHet=3.0103;FS=2.192;HaplotypeScore=193.1557;MLEAC=1;MLEAF=0.500;MQ=32.02;MQ0=20;MQRankSum=0.403;QD=2.20;ReadPosRankSum=1.016;SOR=0.762 GT:AD:DP:GQ:PL 0/1:113,39:163:99:362,0,1351
CP000253.1 554743 . T C 983.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.409;DP=168;Dels=0.02;ExcessHet=3.0103;FS=0.625;HaplotypeScore=176.2420;MLEAC=1;MLEAF=0.500;MQ=32.27;MQ0=19;MQRankSum=0.006;QD=6.19;ReadPosRankSum=1.008;SOR=0.797 GT:AD:DP:GQ:PL 0/1:86,73:164:99:1012,0,589
CP000253.1 554746 . C T 45.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.092;DP=165;Dels=0.02;ExcessHet=3.0103;FS=1.345;HaplotypeScore=201.7166;MLEAC=1;MLEAF=0.500;MQ=32.53;MQ0=18;MQRankSum=-0.366;QD=0.29;ReadPosRankSum=-0.408;SOR=1.022 GT:AD:DP:GQ:PL 0/1:136,21:161:74:74,0,1816
CP000253.1 554749 . T C 225.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.244;DP=167;Dels=0.02;ExcessHet=3.0103;FS=1.046;HaplotypeScore=165.8867;MLEAC=1;MLEAF=0.500;MQ=33.04;MQ0=18;MQRankSum=0.683;QD=1.44;ReadPosRankSum=0.165;SOR=0.995 GT:AD:DP:GQ:PL 0/1:121,36:163:99:254,0,1416
CP000253.1 554752 . G A 2348.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.756;DP=165;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=177.2462;MLEAC=2;MLEAF=1.00;MQ=33.06;MQ0=17;MQRankSum=1.068;QD=15.87;ReadPosRankSum=-0.273;SOR=0.652 GT:AD:DP:GQ:PL 1/1:10,138:161:99:2377,136,0
CP000253.1 554755 . C T 227.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.148;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=188.4059;MLEAC=1;MLEAF=0.500;MQ=33.51;MQ0=20;MQRankSum=-0.519;QD=1.29;ReadPosRankSum=0.467;SOR=0.793 GT:AD:DP:GQ:PL 0/1:135,41:179:99:256,0,1671
CP000253.1 554761 . T C 543.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.098;DP=192;Dels=0.00;ExcessHet=3.0103;FS=3.050;HaplotypeScore=163.4228;MLEAC=1;MLEAF=0.500;MQ=33.47;MQ0=24;MQRankSum=0.965;QD=2.94;ReadPosRankSum=-0.934;SOR=0.864 GT:AD:DP:GQ:PL 0/1:140,45:192:99:572,0,1578
CP000253.1 554764 . C T 558.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.168;DP=193;Dels=0.00;ExcessHet=3.0103;FS=1.806;HaplotypeScore=173.7642;MLEAC=1;MLEAF=0.500;MQ=33.66;MQ0=24;MQRankSum=2.111;QD=3.07;ReadPosRankSum=-0.791;SOR=0.623 GT:AD:DP:GQ:PL 0/1:137,45:193:99:587,0,1595
CP000253.1 554767 . C T 233.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.290;DP=198;Dels=0.00;ExcessHet=3.0103;FS=1.523;HaplotypeScore=196.1481;MLEAC=1;MLEAF=0.500;MQ=34.33;MQ0=24;MQRankSum=0.535;QD=1.23;ReadPosRankSum=0.600;SOR=0.535 GT:AD:DP:GQ:PL 0/1:150,40:198:99:262,0,1903
CP000253.1 554773 . T C 305.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.434;DP=209;Dels=0.00;ExcessHet=3.0103;FS=6.187;HaplotypeScore=208.5379;MLEAC=1;MLEAF=0.500;MQ=34.06;MQ0=25;MQRankSum=1.343;QD=1.54;ReadPosRankSum=-2.435;SOR=0.790 GT:AD:DP:GQ:PL 0/1:162,37:208:99:334,0,1874
CP000253.1 554776 . A G 149.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.704;DP=213;Dels=0.00;ExcessHet=3.0103;FS=1.410;HaplotypeScore=193.1379;MLEAC=1;MLEAF=0.500;MQ=33.87;MQ0=25;MQRankSum=-0.283;QD=0.74;ReadPosRankSum=3.652;SOR=0.571 GT:AD:DP:GQ:PL 0/1:160,43:213:99:178,0,2027
CP000253.1 554785 . T C 191.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.052;DP=217;Dels=0.00;ExcessHet=3.0103;FS=5.430;HaplotypeScore=176.7033;MLEAC=1;MLEAF=0.500;MQ=33.94;MQ0=28;MQRankSum=-0.451;QD=0.91;ReadPosRankSum=-0.351;SOR=0.467 GT:AD:DP:GQ:PL 0/1:158,53:217:99:220,0,2146
CP000253.1 554791 . C T 379.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.164;DP=224;Dels=0.00;ExcessHet=3.0103;FS=1.944;HaplotypeScore=175.9348;MLEAC=1;MLEAF=0.500;MQ=34.37;MQ0=28;MQRankSum=1.280;QD=1.79;ReadPosRankSum=-2.748;SOR=0.657 GT:AD:DP:GQ:PL 0/1:173,39:224:99:408,0,2200
CP000253.1 554809 . T C 262.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.181;DP=235;Dels=0.00;ExcessHet=3.0103;FS=11.859;HaplotypeScore=189.4181;MLEAC=1;MLEAF=0.500;MQ=36.11;MQ0=26;MQRankSum=0.226;QD=1.17;ReadPosRankSum=-2.012;SOR=0.857 GT:AD:DP:GQ:PL 0/1:173,52:235:99:291,0,2516
CP000253.1 554812 . A G 270.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.977;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.737;HaplotypeScore=258.3886;MLEAC=1;MLEAF=0.500;MQ=36.12;MQ0=26;MQRankSum=1.321;QD=1.17;ReadPosRankSum=-1.002;SOR=0.556 GT:AD:DP:GQ:PL 0/1:198,34:235:99:299,0,3013
CP000253.1 554818 . C T 1268.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.910;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.689;HaplotypeScore=234.1024;MLEAC=1;MLEAF=0.500;MQ=36.52;MQ0=25;MQRankSum=4.042;QD=5.96;ReadPosRankSum=-1.513;SOR=1.130 GT:AD:DP:GQ:PL 0/1:124,89:224:99:1297,0,1155
CP000253.1 554821 . T C 496.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.303;DP=224;Dels=0.00;ExcessHet=3.0103;FS=1.250;HaplotypeScore=193.4388;MLEAC=1;MLEAF=0.500;MQ=36.65;MQ0=25;MQRankSum=-1.560;QD=2.34;ReadPosRankSum=1.723;SOR=0.844 GT:AD:DP:GQ:PL 0/1:142,70:224:99:525,0,1969
CP000253.1 554827 . C T 459.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.260;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=201.0226;MLEAC=1;MLEAF=0.500;MQ=36.63;MQ0=25;MQRankSum=-0.106;QD=2.20;ReadPosRankSum=-1.943;SOR=0.692 GT:AD:DP:GQ:PL 0/1:151,58:225:99:488,0,2132
CP000253.1 554833 . T C 17.84 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.802;DP=222;Dels=0.00;ExcessHet=3.0103;FS=2.301;HaplotypeScore=216.5520;MLEAC=1;MLEAF=0.500;MQ=36.61;MQ0=24;MQRankSum=0.508;QD=0.08;ReadPosRankSum=-0.582;SOR=1.089 GT:AD:DP:GQ:PL 0/1:182,38:222:46:46,0,2538
CP000253.1 554839 . C T 186.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.178;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=367.4053;MLEAC=1;MLEAF=0.500;MQ=37.73;MQ0=21;MQRankSum=-2.160;QD=0.95;ReadPosRankSum=-0.216;SOR=0.767 GT:AD:DP:GQ:PL 0/1:156,41:202:99:215,0,2547
CP000253.1 554863 . T C 475.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.567;DP=207;Dels=0.01;ExcessHet=3.0103;FS=0.815;HaplotypeScore=303.2137;MLEAC=1;MLEAF=0.500;MQ=43.55;MQ0=17;MQRankSum=-3.363;QD=2.37;ReadPosRankSum=2.907;SOR=0.977 GT:AD:DP:GQ:PL 0/1:147,54:205:99:504,0,2156
CP000253.1 554869 . C T 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.313;DP=198;Dels=0.00;ExcessHet=3.0103;FS=8.294;HaplotypeScore=122.4690;MLEAC=1;MLEAF=0.500;MQ=45.39;MQ0=15;MQRankSum=-2.565;QD=0.06;ReadPosRankSum=2.616;SOR=0.391 GT:AD:DP:GQ:PL 0/1:156,38:198:39:39,0,3045
CP000253.1 554875 . C T 787.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.164;DP=191;Dels=0.00;ExcessHet=3.0103;FS=2.631;HaplotypeScore=115.7634;MLEAC=1;MLEAF=0.500;MQ=46.06;MQ0=11;MQRankSum=-0.807;QD=4.43;ReadPosRankSum=0.914;SOR=1.270 GT:AD:DP:GQ:PL 0/1:115,63:191:99:816,0,1728
CP000253.1 554881 . C T 186.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.204;DP=196;Dels=0.00;ExcessHet=3.0103;FS=1.500;HaplotypeScore=134.7224;MLEAC=1;MLEAF=0.500;MQ=47.16;MQ0=11;MQRankSum=-4.013;QD=0.99;ReadPosRankSum=1.409;SOR=0.842 GT:AD:DP:GQ:PL 0/1:149,40:196:99:215,0,2773
CP000253.1 554890 . C T 513.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.380;DP=182;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=148.8991;MLEAC=1;MLEAF=0.500;MQ=48.37;MQ0=9;MQRankSum=1.684;QD=2.99;ReadPosRankSum=-1.324;SOR=0.656 GT:AD:DP:GQ:PL 0/1:128,44:181:99:542,0,2256
CP000253.1 554902 . G A 402.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.827;DP=179;Dels=0.01;ExcessHet=3.0103;FS=0.850;HaplotypeScore=153.2992;MLEAC=1;MLEAF=0.500;MQ=50.10;MQ0=6;MQRankSum=-4.922;QD=2.30;ReadPosRankSum=0.308;SOR=0.266 GT:AD:DP:GQ:PL 0/1:129,46:178:99:431,0,2207
CP000253.1 554911 . C T 1022.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.581;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=109.7727;MLEAC=1;MLEAF=0.500;MQ=51.04;MQ0=6;MQRankSum=-0.119;QD=5.98;ReadPosRankSum=-0.176;SOR=0.698 GT:AD:DP:GQ:PL 0/1:105,66:175:99:1051,0,2049
CP000253.1 554920 . T A 4037.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.231;DP=168;Dels=0.00;ExcessHet=3.0103;FS=4.867;HaplotypeScore=72.7066;MLEAC=2;MLEAF=1.00;MQ=51.98;MQ0=4;MQRankSum=2.305;QD=25.24;ReadPosRankSum=-1.276;SOR=1.414 GT:AD:DP:GQ:PL 1/1:2,158:168:99:4066,293,0
CP000253.1 554956 . C T 1134.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.281;DP=166;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=133.3249;MLEAC=1;MLEAF=0.500;MQ=55.90;MQ0=0;MQRankSum=-0.419;QD=6.96;ReadPosRankSum=0.809;SOR=0.656 GT:AD:DP:GQ:PL 0/1:103,60:165:99:1163,0,2543
CP000253.1 554962 . A G 2455.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.155;DP=169;Dels=0.00;ExcessHet=3.0103;FS=2.172;HaplotypeScore=130.9262;MLEAC=1;MLEAF=0.500;MQ=55.97;MQ0=0;MQRankSum=0.893;QD=14.79;ReadPosRankSum=-0.470;SOR=0.896 GT:AD:DP:GQ:PL 0/1:66,100:169:99:2484,0,1218
CP000253.1 554968 . G A 1270.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.988;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.0024;MLEAC=1;MLEAF=0.500;MQ=56.08;MQ0=0;MQRankSum=-0.373;QD=7.52;ReadPosRankSum=0.580;SOR=0.674 GT:AD:DP:GQ:PL 0/1:103,66:170:99:1299,0,2491
CP000253.1 554977 . A T 1319.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.502;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3099;MLEAC=1;MLEAF=0.500;MQ=56.59;MQ0=0;MQRankSum=-0.787;QD=7.81;ReadPosRankSum=0.121;SOR=0.719 GT:AD:DP:GQ:PL 0/1:103,66:169:99:1348,0,2614
CP000253.1 554980 . A G 1303.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.403;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6483;MLEAC=1;MLEAF=0.500;MQ=56.67;MQ0=0;MQRankSum=-0.900;QD=7.54;ReadPosRankSum=0.499;SOR=0.752 GT:AD:DP:GQ:PL 0/1:107,66:173:99:1332,0,2663
CP000253.1 554983 . T C 1273.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.350;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2305;MLEAC=1;MLEAF=0.500;MQ=56.67;MQ0=0;MQRankSum=-0.844;QD=7.45;ReadPosRankSum=0.401;SOR=0.667 GT:AD:DP:GQ:PL 0/1:105,66:173:99:1302,0,2655
CP000253.1 555054 . G A 1370.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.075;DP=175;Dels=0.00;ExcessHet=3.0103;FS=2.066;HaplotypeScore=20.6128;MLEAC=1;MLEAF=0.500;MQ=59.73;MQ0=0;MQRankSum=-2.249;QD=7.88;ReadPosRankSum=-0.955;SOR=0.958 GT:AD:DP:GQ:PL 0/1:109,65:175:99:1399,0,2436
CP000253.1 555063 . A G 1397.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.854;DP=175;Dels=0.00;ExcessHet=3.0103;FS=5.749;HaplotypeScore=16.1513;MLEAC=1;MLEAF=0.500;MQ=59.73;MQ0=0;MQRankSum=-2.267;QD=8.08;ReadPosRankSum=-1.275;SOR=1.108 GT:AD:DP:GQ:PL 0/1:109,64:175:99:1426,0,2369
CP000253.1 555064 . C T 1135.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.901;DP=169;Dels=0.00;ExcessHet=3.0103;FS=2.130;HaplotypeScore=17.0454;MLEAC=1;MLEAF=0.500;MQ=59.85;MQ0=0;MQRankSum=-1.371;QD=6.72;ReadPosRankSum=-0.710;SOR=0.966 GT:AD:DP:GQ:PL 0/1:111,58:169:99:1164,0,2450
CP000253.1 555091 . T C 987.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.025;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.644;HaplotypeScore=13.5504;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.54;ReadPosRankSum=-3.116;SOR=0.772 GT:AD:DP:GQ:PL 0/1:98,53:152:99:1016,0,2260
CP000253.1 555100 . T C 1017.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.181;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.644;HaplotypeScore=15.1464;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.83;ReadPosRankSum=-3.426;SOR=0.758 GT:AD:DP:GQ:PL 0/1:97,52:149:99:1046,0,2233
CP000253.1 555112 . T A 1023.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.854;DP=144;Dels=0.00;ExcessHet=3.0103;FS=2.280;HaplotypeScore=12.8249;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=7.16;ReadPosRankSum=-3.401;SOR=0.954 GT:AD:DP:GQ:PL 0/1:93,50:144:99:1052,0,2059
CP000253.1 555136 . C T 660.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.469;DP=112;Dels=0.00;ExcessHet=3.0103;FS=2.852;HaplotypeScore=13.0478;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=5.95;ReadPosRankSum=-2.792;SOR=1.092 GT:AD:DP:GQ:PL 0/1:77,34:112:99:689,0,1684
CP000253.1 555148 . C T 651.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.099;DP=112;Dels=0.00;ExcessHet=3.0103;FS=1.731;HaplotypeScore=5.5055;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=5.82;ReadPosRankSum=-3.278;SOR=1.041 GT:AD:DP:GQ:PL 0/1:79,33:112:99:680,0,1715
CP000253.1 555194 . A G 1129.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:47:81:1158,81,0
CP000253.1 555641 . T C 329.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:358,24,0
CP000253.1 555800 . T C 981.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.31;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1010,69,0
CP000253.1 555815 . G A 986.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:44:69:1015,69,0
CP000253.1 555857 . T G 673.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:48:702,48,0
CP000253.1 555996 . A G 297.94 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.686;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.53;ReadPosRankSum=-0.718;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,16:17:14:326,0,14
CP000253.1 556029 . G A 301.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.56;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:330,24,0
CP000253.1 556064 . G A 206.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.029;DP=13;Dels=0.00;ExcessHet=3.0103;FS=3.123;HaplotypeScore=7.3613;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=15.91;ReadPosRankSum=-0.298;SOR=0.141 GT:AD:DP:GQ:PL 0/1:2,11:13:45:235,0,45
CP000253.1 556110 . A C 434.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:33:463,33,0
CP000253.1 556286 . A G 1365.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.919;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.55;ReadPosRankSum=0.299;SOR=0.742 GT:AD:DP:GQ:PL 1/1:1,57:58:99:1394,99,0
CP000253.1 556539 . G A 4013.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8282;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,175:176:99:4042,277,0
CP000253.1 556550 . T G 3534.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.66;ReadPosRankSum=-0.355;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,155:157:99:3563,247,0
CP000253.1 556596 . C A 3506.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3535,241,0
CP000253.1 556631 . C T 3068.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3975;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3097,214,0
CP000253.1 556670 . A G 2613.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5439;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.956 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2642,184,0
CP000253.1 556791 . C A 703.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:51:732,51,0
CP000253.1 556792 . T A 709.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:51:738,51,0
CP000253.1 556836 . T C 223.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:252,18,0
CP000253.1 556840 . A T 212.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:241,18,0
CP000253.1 556846 . G A 223.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:252,18,0
CP000253.1 556860 . A G 304.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:333,24,0
CP000253.1 556929 . T C 805.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:57:834,57,0
CP000253.1 556962 . C T 884.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:63:913,63,0
CP000253.1 557049 . T A 543.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:572,39,0
CP000253.1 557051 . A G 531.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.27;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:560,39,0
CP000253.1 557052 . A C 543.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:572,39,0
CP000253.1 557060 . G A 553.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:39:582,39,0
CP000253.1 557166 . C T 576.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:605,42,0
CP000253.1 557169 . A G 572.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:601,42,0
CP000253.1 557172 . G A 577.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:42:606,42,0
CP000253.1 557181 . A G 649.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:48:678,48,0
CP000253.1 557192 . C T 614.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:45:643,45,0
CP000253.1 557211 . G A 555.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:42:584,42,0
CP000253.1 557465 . C T 2006.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.05;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2035,138,0
CP000253.1 557655 . C T 1521.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1550,108,0
CP000253.1 557679 . G A 1485.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1514,105,0
CP000253.1 557691 . A G 822.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8583;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:60:851,60,0
CP000253.1 557985 . T C 310.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:339,24,0
CP000253.1 558309 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 558429 . A T 82.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:110,9,0
CP000253.1 558536 . A C 279.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.52;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:308,21,0
CP000253.1 558884 . A G 1355.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.871;DP=59;Dels=0.00;ExcessHet=3.0103;FS=3.254;HaplotypeScore=10.5840;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.38;ReadPosRankSum=-0.329;SOR=0.504 GT:AD:DP:GQ:PL 1/1:1,57:59:65:1384,65,0
CP000253.1 558907 . C T 1183.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.723;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4826;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.76;ReadPosRankSum=-1.067;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,51:52:50:1212,50,0
CP000253.1 559118 . A G 3240.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6007;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3269,229,0
CP000253.1 559253 . G A 2311.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1775;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.69;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2340,166,0
CP000253.1 559913 . A G 2962.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6062;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,112:113:99:2991,214,0
CP000253.1 559973 . G A 3547.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,137:142:99:3576,256,0
CP000253.1 560118 . T C 4737.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.5057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,195:195:99:4766,337,0
CP000253.1 560298 . C T 5686.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9198;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,232:232:99:5715,397,0
CP000253.1 560417 . T C 4326.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8912;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4355,301,0
CP000253.1 560436 . A T 3985.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1263;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4014,280,0
CP000253.1 560998 . G A 722.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:51:751,51,0
CP000253.1 562283 . G A 2346.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4938;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2375,166,0
CP000253.1 563470 . G T 2242.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7551;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2271,157,0
CP000253.1 563488 . G A 1724.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1753,120,0
CP000253.1 563506 . A G 1641.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,70:71:99:1670,114,0
CP000253.1 563511 . G A 1603.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1632,114,0
CP000253.1 563519 . A G 1339.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1368,96,0
CP000253.1 563521 . G A 1317.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1346,93,0
CP000253.1 563523 . A C 1356.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1385,96,0
CP000253.1 563533 . T A 1300.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=1.077 GT:AD:DP:GQ:PL 1/1:0,53:53:93:1329,93,0
CP000253.1 563536 . C A 1196.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.01;ReadPosRankSum=-1.168;SOR=0.354 GT:AD:DP:GQ:PL 1/1:1,51:52:87:1225,87,0
CP000253.1 563539 . T A 1260.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.656;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.25;ReadPosRankSum=0.214;SOR=1.051 GT:AD:DP:GQ:PL 1/1:2,50:52:90:1289,90,0
CP000253.1 563545 . T A 1305.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.965;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1775;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.64;ReadPosRankSum=-1.277;SOR=0.374 GT:AD:DP:GQ:PL 1/1:1,52:54:93:1334,93,0
CP000253.1 563581 . G A 717.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:746,51,0
CP000253.1 563590 . T A 704.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:733,51,0
CP000253.1 563593 . T C 695.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:724,51,0
CP000253.1 563617 . C A 313.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:342,24,0
CP000253.1 563629 . C T 146.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:12:174,12,0
CP000253.1 563687 . T A 173.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:202,15,0
CP000253.1 563716 . T G 130.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:158,12,0
CP000253.1 563736 . A T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 563737 . C A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 563740 . T C 52.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0
CP000253.1 563741 . A G 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 563744 . A T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 563747 . T G 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 563758 . A G 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 563767 . C T 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 563776 . A C 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 563790 . A C 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 563807 . T A 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 563808 . G A 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 563829 . T C 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 563832 . G A 92.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0
CP000253.1 563844 . A T 86.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:114,9,0
CP000253.1 563849 . C T 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 563854 . T A 92.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0
CP000253.1 563855 . C G 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 563860 . A G 88.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:116,9,0
CP000253.1 563862 . G A 92.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0
CP000253.1 563864 . C T 84.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:112,9,0
CP000253.1 563875 . C G 228.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:257,18,0
CP000253.1 564010 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 564361 . C G 3154.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7116;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3183,220,0
CP000253.1 564568 . C G 2621.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2650,187,0
CP000253.1 564571 . A G 2651.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.02;ReadPosRankSum=0.000;SOR=0.438 GT:AD:DP:GQ:PL 1/1:1,105:106:99:2680,190,0
CP000253.1 564661 . T A 2589.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:109:99:2618,181,0
CP000253.1 564727 . C T 2115.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2144,147,0
CP000253.1 564772 . G T 1836.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.084;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5694;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.85;ReadPosRankSum=1.735;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,76:77:99:1865,129,0
CP000253.1 564818 . A C 1498.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1527,108,0
CP000253.1 564823 . T C 1426.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=1.047 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1455,102,0
CP000253.1 564874 . A G 834.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:60:863,60,0
CP000253.1 564907 . A G 785.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8858;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:57:814,57,0
CP000253.1 565099 . C T 912.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:66:941,66,0
CP000253.1 565486 . T C 939.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.649;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.92;ReadPosRankSum=0.466;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,40:41:69:968,69,0
CP000253.1 566035 . T G 469.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.36;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,16:16:36:498,36,0
CP000253.1 567987 . T C 1786.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7549;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1815,132,0
CP000253.1 568064 . C T 1853.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,72:74:99:1882,135,0
CP000253.1 568124 . G A 1720.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9393;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1749,123,0
CP000253.1 568935 . G A 3018.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8568;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3047,208,0
CP000253.1 571750 . T G 3993.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3472;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4022,283,0
CP000253.1 571982 . T C 2452.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2481,175,0
CP000253.1 572173 . A T 1257.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.858;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.16;ReadPosRankSum=-0.624;SOR=0.687 GT:AD:DP:GQ:PL 1/1:1,49:50:90:1286,90,0
CP000253.1 572310 . T A 1124.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1153,81,0
CP000253.1 572586 . A C 578.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:607,42,0
CP000253.1 573816 . A T 3485.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3364;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.21;ReadPosRankSum=-1.492;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,143:146:99:3514,247,0
CP000253.1 573882 . T A 4004.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,161:162:99:4033,280,0
CP000253.1 574062 . G A 2513.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2542,181,0
CP000253.1 574077 . A G 2045.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4476;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2074,144,0
CP000253.1 574252 . A T 1158.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.974;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.19;ReadPosRankSum=1.322;SOR=0.324 GT:AD:DP:GQ:PL 1/1:1,45:46:84:1187,84,0
CP000253.1 574349 . A T 2456.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3463;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=1.053 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2485,175,0
CP000253.1 574474 . A T 3792.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,165:165:99:3821,262,0
CP000253.1 574477 . C T 4100.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4129,286,0
CP000253.1 574482 . G A 4244.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,178:181:99:4273,295,0
CP000253.1 574501 . A G 4534.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,192:194:99:4563,319,0
CP000253.1 574546 . G T 5179.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6562;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,219:219:99:5208,361,0
CP000253.1 574552 . A T 5099.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,213:213:99:5128,358,0
CP000253.1 574720 . C T 4815.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=1.083 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4844,343,0
CP000253.1 575029 . A G 4916.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4945,352,0
CP000253.1 575101 . G A 4957.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,188:190:99:4986,352,0
CP000253.1 575110 . A G 4746.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7581;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4775,337,0
CP000253.1 575284 . C T 4093.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4122,289,0
CP000253.1 575314 . G A 3802.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,160:161:99:3831,268,0
CP000253.1 575347 . A C 3696.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.466;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8705;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.70;ReadPosRankSum=0.355;SOR=0.312 GT:AD:DP:GQ:PL 1/1:1,155:156:99:3725,264,0
CP000253.1 575737 . C T 138.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:166,12,0
CP000253.1 575779 . A G 51.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0
CP000253.1 576197 . T G 2720.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6319;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2749,190,0
CP000253.1 577462 . C A 3789.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.43;ReadPosRankSum=-1.291;SOR=0.408 GT:AD:DP:GQ:PL 1/1:1,148:150:99:3818,277,0
CP000253.1 578112 . T C 6390.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,242:243:99:6419,466,0
CP000253.1 578452 . A G 6719.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.290;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.8760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.10;ReadPosRankSum=2.057;SOR=0.673 GT:AD:DP:GQ:PL 1/1:3,245:250:99:6748,491,0
CP000253.1 578811 . A C 872.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:63:901,63,0
CP000253.1 578886 . T C 431.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:33:460,33,0
CP000253.1 579976 . G A 3588.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,147:149:99:3617,259,0
CP000253.1 580015 . A T 4159.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,163:164:99:4188,298,0
CP000253.1 580048 . A G 4048.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4712;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4077,289,0
CP000253.1 580078 . C T 4040.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,155:158:99:4069,295,0
CP000253.1 580163 . T C 4408.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4437,319,0
CP000253.1 580285 . C T 3127.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.106;DP=130;Dels=0.00;ExcessHet=3.0103;FS=3.487;HaplotypeScore=14.2116;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.06;ReadPosRankSum=1.892;SOR=0.387 GT:AD:DP:GQ:PL 1/1:2,128:130:99:3156,192,0
CP000253.1 580348 . A G 2910.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2939,205,0
CP000253.1 580381 . T A 2732.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7289;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.916 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2761,196,0
CP000253.1 580679 . A T 3162.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.801;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=0.550;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,125:126:99:3191,229,0
CP000253.1 580730 . G A 3263.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3292,235,0
CP000253.1 580772 . G A 3626.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3655,256,0
CP000253.1 580779 . A T 3579.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3777;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,142:145:99:3608,253,0
CP000253.1 580882 . G A 3311.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8526;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.92;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3340,241,0
CP000253.1 581000 . A G 2596.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8054;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=1.059 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2625,187,0
CP000253.1 581132 . G A 2235.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2264,163,0
CP000253.1 581153 . A G 2079.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6296;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.00;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:81:99:2108,150,0
CP000253.1 581174 . A T 2221.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,81:82:99:2250,163,0
CP000253.1 581210 . T C 1876.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1905,138,0
CP000253.1 581234 . G A 1849.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,73:75:99:1878,135,0
CP000253.1 581252 . A G 1747.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5692;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1776,126,0
CP000253.1 581264 . A T 1706.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2146;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:69:99:1735,123,0
CP000253.1 581931 . C T 2214.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.900;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.06;ReadPosRankSum=0.020;SOR=0.394 GT:AD:DP:GQ:PL 1/1:1,84:86:99:2243,160,0
CP000253.1 582185 . A G 2379.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2408,169,0
CP000253.1 582341 . C T 1085.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1114,78,0
CP000253.1 582545 . T C 125.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:153,12,0
CP000253.1 583002 . G A 1990.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.784;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.88;ReadPosRankSum=-0.845;SOR=0.391 GT:AD:DP:GQ:PL 1/1:1,79:80:99:2019,144,0
CP000253.1 583097 . C T 1022.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,38:38:75:1051,75,0
CP000253.1 583268 . A G 991.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:72:1020,72,0
CP000253.1 583394 . G A 2146.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2305;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2175,154,0
CP000253.1 583517 . C T 2933.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9569;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2962,205,0
CP000253.1 583525 . T A 2942.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.92;ReadPosRankSum=1.366;SOR=0.314 GT:AD:DP:GQ:PL 1/1:1,122:123:99:2971,208,0
CP000253.1 583535 . A T 3028.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3057,214,0
CP000253.1 583562 . G A 3124.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6099;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,127:128:99:3153,220,0
CP000253.1 583565 . G A 3168.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.952;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.38;ReadPosRankSum=0.560;SOR=0.553 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3197,223,0
CP000253.1 583598 . A G 3056.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5613;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3085,217,0
CP000253.1 583599 . T G 2956.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2985,211,0
CP000253.1 583601 . C T 3019.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3048,214,0
CP000253.1 583652 . A G 3385.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7419;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3414,244,0
CP000253.1 583658 . G A 3264.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9426;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.33;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:126:99:3293,235,0
CP000253.1 583661 . G A 3363.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2171;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.70;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3392,241,0
CP000253.1 583665 . T C 3388.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4040;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3417,241,0
CP000253.1 583684 . T C 4376.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4427;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4405,313,0
CP000253.1 583755 . C G 5418.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.713;DP=223;Dels=0.00;ExcessHet=3.0103;FS=3.232;HaplotypeScore=19.5305;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=0.000;QD=24.52;ReadPosRankSum=0.463;SOR=0.400 GT:AD:DP:GQ:PL 1/1:1,220:223:99:5447,388,0
CP000253.1 583759 . A G 5425.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2786;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=24.78;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,219:219:99:5454,379,0
CP000253.1 583799 . G A 5746.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3527;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=24.99;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,230:230:99:5775,403,0
CP000253.1 583862 . G A 6260.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1122;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,242:243:99:6289,448,0
CP000253.1 583889 . G A 6353.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9179;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,243:243:99:6382,457,0
CP000253.1 583925 . C T 6263.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2284;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,242:242:99:6292,448,0
CP000253.1 583937 . G A 6200.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,244:245:99:6229,439,0
CP000253.1 583961 . A T 6063.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.451;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.8502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.26;ReadPosRankSum=-0.458;SOR=0.510 GT:AD:DP:GQ:PL 1/1:3,247:250:99:6092,397,0
CP000253.1 583975 . C T 6003.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.016;DP=247;Dels=0.00;ExcessHet=3.0103;FS=3.435;HaplotypeScore=30.6752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.31;ReadPosRankSum=1.115;SOR=0.545 GT:AD:DP:GQ:PL 1/1:1,246:247:99:6032,393,0
CP000253.1 584034 . T C 5650.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.623;DP=232;Dels=0.00;ExcessHet=3.0103;FS=3.342;HaplotypeScore=15.0208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.46;ReadPosRankSum=-0.795;SOR=0.479 GT:AD:DP:GQ:PL 1/1:1,230:232:99:5679,366,0
CP000253.1 584039 . T C 5705.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,232:232:99:5734,400,0
CP000253.1 584092 . G A 5505.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.781;DP=224;Dels=0.00;ExcessHet=3.0103;FS=3.444;HaplotypeScore=13.8112;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.91;ReadPosRankSum=-1.591;SOR=0.553 GT:AD:DP:GQ:PL 1/1:1,220:224:99:5534,354,0
CP000253.1 584240 . G A 3536.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.343;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.58;ReadPosRankSum=0.066;SOR=0.720 GT:AD:DP:GQ:PL 1/1:2,148:150:99:3565,211,0
CP000253.1 584255 . T G 2311.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.691;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.1000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.12;ReadPosRankSum=-0.172;SOR=0.776 GT:AD:DP:GQ:PL 1/1:2,98:100:99:2340,128,0
CP000253.1 584269 . G A 2143.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.017;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.57;ReadPosRankSum=-1.624;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2172,121,0
CP000253.1 584312 . G A 1883.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.871;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1641;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.85;ReadPosRankSum=1.558;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,78:80:99:1912,132,0
CP000253.1 584425 . C T 992.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:75:1021,75,0
CP000253.1 585542 . T C 3771.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,161:162:99:3800,262,0
CP000253.1 585773 . G A 3230.05 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3258,226,0
CP000253.1 585775 . A C 3242.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.004;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=-0.893;SOR=0.242 GT:AD:DP:GQ:PL 1/1:1,131:132:99:3271,229,0
CP000253.1 585841 . G A 2824.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.986;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.94;ReadPosRankSum=0.882;SOR=0.259 GT:AD:DP:GQ:PL 1/1:1,117:118:99:2853,199,0
CP000253.1 585878 . G A 2096.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1339;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2125,150,0
CP000253.1 585884 . C T 2040.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0028;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2069,144,0
CP000253.1 585890 . G A 2035.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2064,144,0
CP000253.1 586013 . T A 1659.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=1.249 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1688,120,0
CP000253.1 586040 . C T 1499.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1528,108,0
CP000253.1 586185 . T A 598.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:627,45,0
CP000253.1 586211 . C T 461.98 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.610;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.00;ReadPosRankSum=-0.792;SOR=0.365 GT:AD:DP:GQ:PL 1/1:1,21:22:13:490,13,0
CP000253.1 586221 . A C 815.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5981;MLEAC=2;MLEAF=1.00;MQ=59.81;MQ0=0;QD=23.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:60:844,60,0
CP000253.1 586264 . A G 1414.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1385;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=23.58;SOR=0.986 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1443,102,0
CP000253.1 586328 . A C 2145.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7739;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.32;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2174,153,0
CP000253.1 586415 . C T 2414.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8188;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2443,169,0
CP000253.1 586421 . T G 2497.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2526,175,0
CP000253.1 586433 . T A 2470.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2499,172,0
CP000253.1 586466 . C T 2113.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2142,147,0
CP000253.1 586479 . G A 2210.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2239,154,0
CP000253.1 586499 . G A 2115.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2144,147,0
CP000253.1 586668 . A T 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=48.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 586669 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=48.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 586676 . A C 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=48.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 586677 . T A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=48.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 586691 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=48.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 586699 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=48.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 586703 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=48.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 589872 . C A 40.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.44;MQ0=0;QD=20.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0
CP000253.1 589941 . G A 182.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.09;MQ0=0;QD=20.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:211,15,0
CP000253.1 590022 . G T 369.78 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.31;MQ0=2;QD=19.46;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,19:19:27:398,27,0
CP000253.1 590058 . A T 413.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=55.97;MQ0=2;QD=18.81;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:30:442,30,0
CP000253.1 590059 . G A 410.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=55.97;MQ0=2;QD=18.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:30:439,30,0
CP000253.1 590100 . A G 494.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:523,36,0
CP000253.1 590102 . A T 499.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:528,36,0
CP000253.1 590126 . G A 446.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:475,33,0
CP000253.1 590142 . T C 450.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:479,33,0
CP000253.1 590151 . T C 359.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:388,27,0
CP000253.1 590153 . T C 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 590174 . C T 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 590238 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 590244 . T C 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 590277 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.20;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:3:45,3,0
CP000253.1 590286 . T C 54.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:82,6,0
CP000253.1 590287 . A G 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 590294 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 590301 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 590307 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:6:90,6,0
CP000253.1 590391 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590459 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590462 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590463 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590464 . A G 12.77 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:39,3,0
CP000253.1 590468 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590484 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590490 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590496 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590499 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590509 . C T 12.77 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:2:3:39,3,0
CP000253.1 590510 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590514 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590519 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590525 . C G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590532 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590538 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 590630 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:175,12,0
CP000253.1 590657 . T A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 590666 . T C 142.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.75;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:170,12,0
CP000253.1 590681 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 590699 . C T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 590816 . C T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 591038 . T G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 591062 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 591104 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 591116 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 591135 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 595407 . T C 321.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.45;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:350,24,0
CP000253.1 595435 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 595438 . T C 273.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:302,21,0
CP000253.1 595444 . G A 325.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:354,24,0
CP000253.1 595449 . C T 398.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.15;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:427,30,0
CP000253.1 595453 . T A 521.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:550,39,0
CP000253.1 595462 . T C 572.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:601,42,0
CP000253.1 595464 . A T 577.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:606,42,0
CP000253.1 595472 . G A 657.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,26:26:48:686,48,0
CP000253.1 595474 . T C 828.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:34:60:857,60,0
CP000253.1 595773 . A G 1995.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:88:99:2024,141,0
CP000253.1 595941 . G T 1466.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1495,105,0
CP000253.1 595945 . A G 1588.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1617,114,0
CP000253.1 596013 . A C 2096.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:86:99:2125,153,0
CP000253.1 596106 . T C 2707.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1909;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,110:111:99:2736,196,0
CP000253.1 596127 . A G 2939.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.91;ReadPosRankSum=1.586;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,117:119:99:2968,214,0
CP000253.1 596147 . A T 3519.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6424;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;QD=26.27;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3548,253,0
CP000253.1 596163 . A T 3647.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1748;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=25.51;SOR=0.956 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3676,262,0
CP000253.1 596252 . A T 3791.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1829;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=25.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3820,271,0
CP000253.1 596256 . A T 3407.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5186;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;QD=25.82;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,132:134:99:3436,244,0
CP000253.1 596262 . A T 3403.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9651;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;QD=25.21;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3432,244,0
CP000253.1 596271 . A G 3386.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.660;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7258;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=0.408;SOR=0.296 GT:AD:DP:GQ:PL 1/1:1,135:136:99:3415,206,0
CP000253.1 596302 . A C 3365.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.9922;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;QD=25.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,134:136:99:3394,238,0
CP000253.1 596410 . G A 3133.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2023;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3162,223,0
CP000253.1 596473 . C T 2093.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.92;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2122,153,0
CP000253.1 596481 . G A 1922.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7129;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1951,141,0
CP000253.1 597829 . G C 835.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:60:864,60,0
CP000253.1 597978 . C T 670.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:699,51,0
CP000253.1 598354 . G T 5149.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5178,364,0
CP000253.1 598839 . T C 2586.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8225;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,98:100:99:2615,193,0
CP000253.1 598992 . T G 1880.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=1.209 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1909,138,0
CP000253.1 599177 . C T 252.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.09;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:21:281,21,0
CP000253.1 599661 . A T 415.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:21:30:444,30,0
CP000253.1 599735 . A T 317.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:346,24,0
CP000253.1 599839 . G T 62.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:6:90,6,0
CP000253.1 599854 . T A 45.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:73,6,0
CP000253.1 600135 . G A 177.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:8:15:206,15,0
CP000253.1 600204 . T A 336.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:365,27,0
CP000253.1 600219 . A C 351.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:380,27,0
CP000253.1 600348 . G A 4808.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.956;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8684;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-1.528;SOR=0.315 GT:AD:DP:GQ:PL 1/1:1,202:203:99:4837,337,0
CP000253.1 600372 . C T 5537.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,232:232:99:5566,388,0
CP000253.1 600471 . G A 5820.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.026;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.76;ReadPosRankSum=1.429;SOR=0.464 GT:AD:DP:GQ:PL 1/1:1,244:245:99:5849,406,0
CP000253.1 600753 . A T 4413.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3307;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,171:172:99:4442,322,0
CP000253.1 600849 . C T 4812.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4841,340,0
CP000253.1 600888 . T A 4421.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.5013;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,183:186:99:4450,316,0
CP000253.1 601043 . C T 3480.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3319;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3509,250,0
CP000253.1 601044 . C T 3412.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5372;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3441,247,0
CP000253.1 601098 . T C 3111.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=1.208 GT:AD:DP:GQ:PL 1/1:0,117:118:99:3140,226,0
CP000253.1 602769 . A C 2581.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.812;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8860;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.59;ReadPosRankSum=1.634;SOR=0.408 GT:AD:DP:GQ:PL 1/1:1,104:105:99:2610,187,0
CP000253.1 602943 . A T 4155.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,165:166:99:4184,295,0
CP000253.1 603363 . T A 6449.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7628;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6478,455,0
CP000253.1 603441 . G A 5954.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4345;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=25.13;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,237:237:99:5983,418,0
CP000253.1 603459 . T C 5620.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,229:230:99:5649,397,0
CP000253.1 603471 . T C 5830.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5705;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,229:233:99:5859,412,0
CP000253.1 603474 . A G 5614.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,225:227:99:5643,397,0
CP000253.1 603478 . T G 5621.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.7112;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,230:231:99:5650,400,0
CP000253.1 603690 . T A 3307.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.465;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=141.5084;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.87;ReadPosRankSum=1.582;SOR=0.316 GT:AD:DP:GQ:PL 1/1:4,129:133:99:3336,200,0
CP000253.1 603743 . A G 2525.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2554,181,0
CP000253.1 603746 . A G 2513.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.979;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2540;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.92;ReadPosRankSum=0.375;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,96:97:99:2542,181,0
CP000253.1 604036 . A G 1258.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.28;MQ0=0;QD=25.18;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1287,90,0
CP000253.1 604043 . G T 1098.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;QD=24.42;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1127,81,0
CP000253.1 604045 . T G 1135.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;MQRankSum=-0.178;QD=25.24;ReadPosRankSum=1.891;SOR=0.820 GT:AD:DP:GQ:PL 1/1:1,44:45:81:1164,81,0
CP000253.1 604052 . G A 1137.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;QD=25.28;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1166,81,0
CP000253.1 604053 . A G 1105.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;QD=25.13;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:45:81:1134,81,0
CP000253.1 604054 . A G 1099.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6809;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;QD=24.99;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:45:81:1128,81,0
CP000253.1 604058 . C A 1136.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6518;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;QD=25.26;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1165,81,0
CP000253.1 604060 . C G 1128.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6183;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;QD=25.08;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1157,81,0
CP000253.1 604066 . A G 1039.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.499;DP=45;Dels=0.00;ExcessHet=3.0103;FS=3.745;HaplotypeScore=5.7900;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;MQRankSum=-0.178;QD=23.11;ReadPosRankSum=-0.511;SOR=0.820 GT:AD:DP:GQ:PL 1/1:1,44:45:78:1068,78,0
CP000253.1 604070 . T A 1134.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2396;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;QD=25.79;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:44:81:1163,81,0
CP000253.1 604071 . T A 1125.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2266;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;QD=25.59;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:44:81:1154,81,0
CP000253.1 604100 . A C 1634.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5922;MLEAC=2;MLEAF=1.00;MQ=59.48;MQ0=0;QD=23.69;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1663,117,0
CP000253.1 604192 . A C 1069.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1098,78,0
CP000253.1 604265 . T A 470.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:499,36,0
CP000253.1 604836 . T C 48.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=39.01;MQ0=0;MQRankSum=0.000;QD=6.10;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,4:8:69:77,0,69
CP000253.1 604840 . T C 48.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=39.01;MQ0=0;MQRankSum=0.000;QD=6.10;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,4:8:69:77,0,69
CP000253.1 604856 . A G 48.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=39.01;MQ0=0;MQRankSum=0.000;QD=6.10;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,4:8:69:77,0,69
CP000253.1 605028 . G A 1882.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1911,132,0
CP000253.1 605117 . A G 1830.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1859,129,0
CP000253.1 605258 . A G 2471.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7236;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2500,175,0
CP000253.1 605437 . T A 4090.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.941;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6207;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.60;ReadPosRankSum=-2.226;SOR=0.774 GT:AD:DP:GQ:PL 1/1:2,179:181:99:4119,241,0
CP000253.1 605662 . G T 888.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:63:917,63,0
CP000253.1 605785 . A G 553.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:39:582,39,0
CP000253.1 606145 . C G 459.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:488,33,0
CP000253.1 606235 . T A 766.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.91;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:54:795,54,0
CP000253.1 606244 . C T 812.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.97;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:57:841,57,0
CP000253.1 606310 . C T 903.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:63:932,63,0
CP000253.1 606484 . G A 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 606554 . C T 309.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:338,24,0
CP000253.1 606565 . T C 304.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:333,24,0
CP000253.1 606595 . T C 415.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:33:444,33,0
CP000253.1 606623 . T C 648.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,26:26:48:677,48,0
CP000253.1 606805 . G A 3777.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,166:166:99:3806,262,0
CP000253.1 606859 . A G 3926.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.31;ReadPosRankSum=0.463;SOR=0.228 GT:AD:DP:GQ:PL 1/1:1,175:177:99:3955,271,0
CP000253.1 606870 . C T 3979.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4008,274,0
CP000253.1 606917 . T C 3633.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5749;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3662,253,0
CP000253.1 606943 . T C 2869.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:121:99:2898,202,0
CP000253.1 606949 . C T 2842.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2871,199,0
CP000253.1 607020 . C T 846.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:63:875,63,0
CP000253.1 607896 . G C 406.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:435,30,0
CP000253.1 608021 . T C 698.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:51:727,51,0
CP000253.1 608113 . C T 975.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:69:1004,69,0
CP000253.1 608267 . C T 1521.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1460;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:63:99:1550,111,0
CP000253.1 608423 . A G 2172.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.684;DP=97;Dels=0.00;ExcessHet=3.0103;FS=3.055;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.40;ReadPosRankSum=0.375;SOR=0.289 GT:AD:DP:GQ:PL 1/1:1,96:97:99:2201,151,0
CP000253.1 608535 . G T 1488.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1517,105,0
CP000253.1 608903 . G T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 609574 . G A 141.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:169,12,0
CP000253.1 609739 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 609952 . G C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 611029 . A T 227.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:256,18,0
CP000253.1 611232 . G A 419.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:448,30,0
CP000253.1 611970 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 612235 . C A 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 612518 . C T 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 612830 . G A 1156.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.83;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:81:1185,81,0
CP000253.1 612907 . G T 658.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.633;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.95;ReadPosRankSum=0.718;SOR=0.892 GT:AD:DP:GQ:PL 1/1:2,31:33:9:686,9,0
CP000253.1 612937 . C T 701.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.578;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9216;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.24;ReadPosRankSum=-0.793;SOR=0.756 GT:AD:DP:GQ:PL 1/1:2,31:33:12:729,12,0
CP000253.1 612995 . A T 660.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:689,48,0
CP000253.1 613055 . T G 433.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:462,33,0
CP000253.1 613199 . T G 757.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.65;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:54:786,54,0
CP000253.1 613596 . A G 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 613597 . T A 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 613598 . T A 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 613665 . T C 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 613667 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 614022 . C T 1416.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1445,99,0
CP000253.1 614226 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.78;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:12:179,12,0
CP000253.1 614307 . T A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 614798 . T C 2424.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5334;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2453,172,0
CP000253.1 615504 . C T 1287.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1316,90,0
CP000253.1 615510 . A T 1207.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1236,84,0
CP000253.1 615513 . G C 1255.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:87:1284,87,0
CP000253.1 615748 . G A 1945.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,79:82:99:1974,138,0
CP000253.1 615759 . T C 1945.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.782;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3011;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.32;ReadPosRankSum=0.717;SOR=0.771 GT:AD:DP:GQ:PL 1/1:1,79:81:99:1974,138,0
CP000253.1 615798 . T C 2014.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2625;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,83:85:99:2043,144,0
CP000253.1 615828 . T A 2136.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8691;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2165,150,0
CP000253.1 615837 . G A 2264.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1083;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,92:94:99:2293,160,0
CP000253.1 615840 . C T 2262.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9918;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:94:99:2291,160,0
CP000253.1 615843 . T A 2221.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2991;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2250,157,0
CP000253.1 615858 . T A 2244.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2273,160,0
CP000253.1 615861 . G A 2258.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2287,160,0
CP000253.1 615873 . T A 2087.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2116,147,0
CP000253.1 615879 . G C 2063.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6911;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2092,144,0
CP000253.1 615885 . A C 2194.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2223,154,0
CP000253.1 615891 . C T 2278.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2307,160,0
CP000253.1 616245 . G T 574.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:603,42,0
CP000253.1 616249 . G A 599.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:45:628,45,0
CP000253.1 616272 . A T 399.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:428,30,0
CP000253.1 616281 . A T 433.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:462,33,0
CP000253.1 616299 . A T 376.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:30:405,30,0
CP000253.1 616314 . G A 709.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:54:738,54,0
CP000253.1 616317 . T G 766.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:57:795,57,0
CP000253.1 616362 . A C 1507.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.671;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.13;ReadPosRankSum=0.000;SOR=0.607 GT:AD:DP:GQ:PL 1/1:1,59:60:99:1536,108,0
CP000253.1 616404 . A G 3204.83 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.064 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3234,229,0
CP000253.1 616436 . T C 3618.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,158:160:99:3647,253,0
CP000253.1 616448 . C G 3845.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,166:166:99:3874,268,0
CP000253.1 616478 . A C 3900.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1910;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,171:172:99:3929,271,0
CP000253.1 616627 . A G 4175.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4204,289,0
CP000253.1 616629 . C G 4124.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,179:183:99:4153,289,0
CP000253.1 616954 . C T 2288.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2317,160,0
CP000253.1 617031 . G A 1170.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6297;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1199,84,0
CP000253.1 617428 . G C 1712.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1741,120,0
CP000253.1 617638 . A G 689.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:51:718,51,0
CP000253.1 617908 . C T 1101.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:78:1130,78,0
CP000253.1 618313 . A G 1369.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1398,99,0
CP000253.1 619096 . T C 826.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:855,60,0
CP000253.1 619877 . T G 165.41 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=16.54;ReadPosRankSum=0.524;SOR=0.525 GT:AD:DP:GQ:PL 0/1:1,9:10:8:193,0,8
CP000253.1 620720 . G A 1025.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1054,72,0
CP000253.1 622270 . G T 2137.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.04;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2166,147,0
CP000253.1 622913 . G A 1997.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2725;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2026,138,0
CP000253.1 623305 . G T 1212.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:47:87:1241,87,0
CP000253.1 623321 . G A 1312.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1341,96,0
CP000253.1 623327 . T A 1799.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8720;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1828,129,0
CP000253.1 623334 . T C 1801.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1830,129,0
CP000253.1 623832 . C T 3073.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7737;MLEAC=2;MLEAF=1.00;MQ=58.81;MQ0=0;QD=24.01;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3102,217,0
CP000253.1 623914 . T C 1932.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8598;MLEAC=2;MLEAF=1.00;MQ=58.06;MQ0=0;QD=24.47;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1961,138,0
CP000253.1 624495 . G A 2895.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=1.035 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2924,205,0
CP000253.1 625070 . G A 1104.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1133,81,0
CP000253.1 628355 . A T 1126.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.756;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.67;ReadPosRankSum=-1.470;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,51:52:44:1155,44,0
CP000253.1 628718 . T G 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 629378 . G A 2730.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.909;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.95;ReadPosRankSum=-0.844;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,118:119:99:2759,190,0
CP000253.1 629546 . C A 620.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:45:649,45,0
CP000253.1 629612 . A G 336.03 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.510;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5707;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.00;ReadPosRankSum=-0.719;SOR=0.976 GT:AD:DP:GQ:PL 0/1:2,14:16:12:364,0,12
CP000253.1 629669 . G A 638.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.643;DP=27;Dels=0.00;ExcessHet=3.0103;FS=3.098;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.53;ReadPosRankSum=-1.378;SOR=2.030 GT:AD:DP:GQ:PL 1/1:2,23:27:9:666,9,0
CP000253.1 629678 . A G 1041.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.16;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,37:37:78:1070,78,0
CP000253.1 629688 . C T 1047.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.459;DP=41;Dels=0.00;ExcessHet=3.0103;FS=2.968;HaplotypeScore=3.3873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.56;ReadPosRankSum=-1.922;SOR=1.923 GT:AD:DP:GQ:PL 1/1:2,39:41:40:1076,40,0
CP000253.1 629759 . A C 1835.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.12;ReadPosRankSum=-2.358;SOR=0.546 GT:AD:DP:GQ:PL 1/1:3,80:83:98:1864,98,0
CP000253.1 629922 . T G 3886.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,171:171:99:3915,280,0
CP000253.1 630644 . G T 216.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.98;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:18:245,18,0
CP000253.1 632102 . G A 1863.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5853;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,77:78:99:1892,135,0
CP000253.1 632180 . C A 2209.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2238,160,0
CP000253.1 632700 . C A 1164.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1193,81,0
CP000253.1 632702 . G A 1160.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1189,81,0
CP000253.1 632897 . T C 438.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:467,33,0
CP000253.1 633166 . A T 2462.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8692;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,103:105:99:2491,175,0
CP000253.1 633211 . T A 2012.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.860;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1961;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.40;ReadPosRankSum=1.028;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,85:86:99:2041,144,0
CP000253.1 633313 . C T 3946.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5413;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,170:170:99:3975,274,0
CP000253.1 633564 . C T 594.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.03;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:23:45:623,45,0
CP000253.1 633685 . C T 518.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:39:547,39,0
CP000253.1 633959 . C T 3481.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3510,238,0
CP000253.1 634601 . T C 1004.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1033,72,0
CP000253.1 635067 . C A 6196.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9101;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6225,439,0
CP000253.1 635261 . T A 6587.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.9874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.78;ReadPosRankSum=-0.831;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,245:248:99:6616,479,0
CP000253.1 635373 . A T 6264.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.7075;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=1.004 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6293,451,0
CP000253.1 637349 . C T 2763.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2792,193,0
CP000253.1 637514 . T A 2743.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,109:110:99:2772,196,0
CP000253.1 638131 . G A 269.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:298,21,0
CP000253.1 638329 . C T 296.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:24:325,24,0
CP000253.1 638862 . G C 3959.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4476;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,164:167:99:3988,277,0
CP000253.1 641125 . T C 172.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.61;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:201,15,0
CP000253.1 644058 . T A 830.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:60:859,60,0
CP000253.1 645480 . A G 2362.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8230;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2391,166,0
CP000253.1 645697 . A G 4517.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,181:183:99:4546,325,0
CP000253.1 647016 . G T 269.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.75;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:21:298,21,0
CP000253.1 647042 . A G 216.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:12:18:245,18,0
CP000253.1 647077 . A T 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 647109 . T A 308.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.07;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:337,24,0
CP000253.1 647509 . T C 1788.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.787;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0030;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.84;ReadPosRankSum=-0.217;SOR=0.637 GT:AD:DP:GQ:PL 1/1:1,71:72:99:1817,129,0
CP000253.1 647731 . A T 2066.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2095,147,0
CP000253.1 647932 . T A 2523.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.932;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.59;ReadPosRankSum=1.734;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,106:107:99:2552,178,0
CP000253.1 648055 . T A 1868.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,77:79:99:1897,132,0
CP000253.1 648381 . G T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 649126 . G T 1040.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1069,75,0
CP000253.1 649222 . T C 1346.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:93:1375,93,0
CP000253.1 649231 . C T 1398.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1427,99,0
CP000253.1 649447 . T C 583.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8899;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:612,42,0
CP000253.1 649486 . C T 548.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:39:577,39,0
CP000253.1 649522 . A G 588.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:617,42,0
CP000253.1 649607 . T C 445.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:474,33,0
CP000253.1 649616 . A G 446.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:475,33,0
CP000253.1 649642 . T G 378.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.04;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:407,30,0
CP000253.1 649706 . T C 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 649842 . T A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 650144 . G A 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 650340 . C T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 650361 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 650383 . T C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 650421 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 650426 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 650430 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 650435 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 650445 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 650497 . A G 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 650563 . A G 982.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.236 GT:AD:DP:GQ:PL 1/1:0,39:39:72:1011,72,0
CP000253.1 650857 . G A 2515.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2544,175,0
CP000253.1 650872 . C T 2448.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2477,172,0
CP000253.1 650911 . T C 1931.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.827;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.27;ReadPosRankSum=-1.023;SOR=0.312 GT:AD:DP:GQ:PL 1/1:1,82:83:99:1960,138,0
CP000253.1 650971 . G T 1380.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1409,99,0
CP000253.1 651236 . G A 434.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:463,33,0
CP000253.1 651535 . T C 1548.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6049;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1577,108,0
CP000253.1 651805 . T C 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 651853 . T C 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 652390 . G T 1395.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:96:1424,96,0
CP000253.1 652528 . T C 495.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:524,36,0
CP000253.1 652529 . C G 498.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:527,36,0
CP000253.1 652531 . G T 500.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:529,36,0
CP000253.1 652540 . C T 536.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:565,39,0
CP000253.1 652543 . G A 539.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:568,39,0
CP000253.1 652832 . C G 809.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:57:838,57,0
CP000253.1 652929 . T A 357.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:386,27,0
CP000253.1 653099 . G A 1270.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1299,90,0
CP000253.1 653165 . T C 1964.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,85:85:99:1993,138,0
CP000253.1 653210 . A G 2197.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6664;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2226,153,0
CP000253.1 653249 . A G 2502.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.931;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.15;ReadPosRankSum=1.257;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,112:113:99:2531,172,0
CP000253.1 653288 . T C 2494.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9311;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2523,172,0
CP000253.1 653425 . T C 1483.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:63:99:1512,105,0
CP000253.1 653453 . A G 1033.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3589;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.00;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:72:1062,72,0
CP000253.1 654274 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 654358 . T C 264.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:293,21,0
CP000253.1 654361 . C T 272.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.98;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:301,21,0
CP000253.1 654385 . G A 324.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:353,24,0
CP000253.1 654397 . A T 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 654403 . C A 407.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:436,30,0
CP000253.1 654409 . A G 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 654415 . A T 530.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:559,39,0
CP000253.1 654421 . G A 634.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:663,45,0
CP000253.1 654562 . C T 718.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.78;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:51:747,51,0
CP000253.1 654568 . A C 723.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:33:51:752,51,0
CP000253.1 654761 . G A 366.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.38;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:27:395,27,0
CP000253.1 654812 . T G 719.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:748,51,0
CP000253.1 654848 . A T 643.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:45:672,45,0
CP000253.1 655070 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 655190 . A C 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 655381 . C T 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 655832 . C T 243.94 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.133;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8661;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.76;ReadPosRankSum=1.484;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,12:13:14:272,0,14
CP000253.1 655859 . G A 481.89 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.517;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.90;ReadPosRankSum=0.159;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,21:22:2:508,2,0
CP000253.1 655871 . A G 496.22 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.784;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.57;ReadPosRankSum=-0.076;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,22:23:4:523,4,0
CP000253.1 655970 . T G 323.10 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.755;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.54;ReadPosRankSum=-1.510;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,14:15:11:351,0,11
CP000253.1 656072 . G A 252.10 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.071;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.01;ReadPosRankSum=0.996;SOR=0.283 GT:AD:DP:GQ:PL 0/1:1,13:14:11:280,0,11
CP000253.1 656143 . C T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 656169 . G A 92.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:120,9,0
CP000253.1 656282 . A T 259.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:288,21,0
CP000253.1 656327 . T A 430.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:33:459,33,0
CP000253.1 656616 . G A 275.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.22;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:304,21,0
CP000253.1 656855 . G T 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 656998 . C A 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 657819 . T A 135.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:163,12,0
CP000253.1 657861 . C T 190.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:219,15,0
CP000253.1 658374 . T A 1036.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:43:78:1065,78,0
CP000253.1 658482 . A G 983.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.93;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:75:1012,75,0
CP000253.1 659004 . G T 169.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:198,15,0
CP000253.1 659077 . A G 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 659083 . T A 93.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:121,9,0
CP000253.1 659084 . A G 93.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:121,9,0
CP000253.1 659093 . G T 172.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=59.75;MQ0=0;QD=21.61;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:201,15,0
CP000253.1 659111 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=59.75;MQ0=0;QD=18.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:12:175,12,0
CP000253.1 659133 . T A 136.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.61;MQ0=0;QD=27.21;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:164,12,0
CP000253.1 659139 . A C 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 659141 . C T 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 659412 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 660351 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 662348 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 662357 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 662369 . G A 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 662375 . T C 137.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:165,12,0
CP000253.1 662453 . A G 539.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:568,39,0
CP000253.1 662474 . G C 544.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:573,39,0
CP000253.1 662489 . G A 573.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:602,42,0
CP000253.1 662495 . T C 585.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:614,42,0
CP000253.1 662702 . A G 259.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.98;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:288,21,0
CP000253.1 663159 . A G 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 663563 . G T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 663615 . C T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 663698 . C T 336.90 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.543;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.72;ReadPosRankSum=0.071;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,16:18:15:365,0,15
CP000253.1 663707 . A T 409.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:438,30,0
CP000253.1 663708 . G A 409.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:438,30,0
CP000253.1 663734 . C T 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 663770 . A G 106.28 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.29;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:9:134,9,0
CP000253.1 663776 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 663851 . T C 226.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:255,18,0
CP000253.1 663854 . T G 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 663878 . A T 231.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:260,18,0
CP000253.1 663899 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 663932 . T C 171.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:200,15,0
CP000253.1 663938 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.34;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:12:175,12,0
CP000253.1 664091 . A C 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 664266 . T A 97.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:125,9,0
CP000253.1 664267 . G A 93.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:121,9,0
CP000253.1 665792 . C T 3780.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9838;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3809,265,0
CP000253.1 665927 . A T 2064.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,88:89:99:2093,144,0
CP000253.1 665938 . T A 2025.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2054,141,0
CP000253.1 666017 . G A 1189.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1218,84,0
CP000253.1 666041 . A G 690.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:719,51,0
CP000253.1 666044 . C T 647.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:48:676,48,0
CP000253.1 666068 . G A 651.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:48:680,48,0
CP000253.1 667011 . G A 259.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:288,21,0
CP000253.1 667083 . A G 552.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:581,42,0
CP000253.1 667381 . T C 2566.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2595,181,0
CP000253.1 667757 . G C 364.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.46;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:393,27,0
CP000253.1 667861 . C T 2029.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,88:90:99:2058,141,0
CP000253.1 667867 . A G 2057.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2086,144,0
CP000253.1 668107 . G T 566.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.07;MQ0=0;QD=25.76;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,22:22:42:595,42,0
CP000253.1 668115 . T C 553.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.97;MQ0=0;QD=26.37;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:42:582,42,0
CP000253.1 668745 . A T 1464.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1493,105,0
CP000253.1 669006 . A G 1641.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1670,120,0
CP000253.1 669093 . G T 3171.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,127:128:99:3200,223,0
CP000253.1 669192 . G A 3869.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5500;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,175:176:99:3898,268,0
CP000253.1 669276 . T C 3296.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2345;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,140:142:99:3325,232,0
CP000253.1 669451 . G A 794.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:57:823,57,0
CP000253.1 669567 . T C 1641.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1670,114,0
CP000253.1 669642 . T C 1400.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1429,99,0
CP000253.1 669656 . C G 1318.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1347,93,0
CP000253.1 670810 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 670921 . T C 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 670941 . T C 271.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:300,21,0
CP000253.1 671165 . A G 746.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.96;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:54:775,54,0
CP000253.1 671214 . A G 711.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:51:740,51,0
CP000253.1 671729 . G A 1669.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5658;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1698,117,0
CP000253.1 671774 . A T 1567.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1596,111,0
CP000253.1 671867 . T C 1914.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.194;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2696;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.26;ReadPosRankSum=2.427;SOR=0.843 GT:AD:DP:GQ:PL 1/1:2,84:87:99:1943,110,0
CP000253.1 671883 . A G 2189.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2218,154,0
CP000253.1 672598 . A T 2984.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3013,211,0
CP000253.1 672643 . A G 2997.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3026,211,0
CP000253.1 672709 . T C 2651.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0182;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2680,187,0
CP000253.1 672845 . G T 1596.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:68:99:1625,114,0
CP000253.1 672973 . A T 1080.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.71;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,39:39:84:1109,84,0
CP000253.1 673329 . C T 3138.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3167,223,0
CP000253.1 673616 . C T 1605.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1634,117,0
CP000253.1 674774 . A G 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 675070 . A G 1140.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1169,81,0
CP000253.1 675169 . A G 1638.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1667,117,0
CP000253.1 675184 . T C 1615.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5465;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1644,117,0
CP000253.1 675197 . C T 1697.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3538;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1726,120,0
CP000253.1 675208 . T C 1609.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.774;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4068;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.36;ReadPosRankSum=-1.285;SOR=0.811 GT:AD:DP:GQ:PL 1/1:2,70:72:82:1638,82,0
CP000253.1 675233 . G A 1646.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:71:99:1675,117,0
CP000253.1 675238 . G A 1653.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1682,117,0
CP000253.1 675241 . T C 1735.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8860;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1764,123,0
CP000253.1 675424 . A T 3345.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7392;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3374,232,0
CP000253.1 675484 . C T 3239.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.929;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0940;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.50;ReadPosRankSum=-0.879;SOR=0.335 GT:AD:DP:GQ:PL 1/1:1,143:144:99:3268,223,0
CP000253.1 675544 . C T 3193.69 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.910;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7129;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.98;ReadPosRankSum=-0.860;SOR=0.410 GT:AD:DP:GQ:PL 1/1:1,138:140:99:3222,223,0
CP000253.1 675592 . G A 2766.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2795,196,0
CP000253.1 675984 . A C 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 676242 . C T 2121.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1394;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2150,147,0
CP000253.1 677028 . C T 860.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:63:889,63,0
CP000253.1 677932 . C T 2446.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3211;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2475,172,0
CP000253.1 678019 . C T 1731.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2890;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1760,123,0
CP000253.1 678362 . G A 799.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:57:828,57,0
CP000253.1 678628 . T A 2605.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2634,184,0
CP000253.1 679159 . A C 1702.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1731,123,0
CP000253.1 679406 . C A 2036.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2065,144,0
CP000253.1 680702 . T A 1600.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1629,111,0
CP000253.1 680772 . G A 1139.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5981;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:81:1168,81,0
CP000253.1 681191 . A G 620.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:649,45,0
CP000253.1 681656 . C T 3579.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8999;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,155:157:99:3608,250,0
CP000253.1 681785 . G A 3694.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.012;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3864;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.81;ReadPosRankSum=0.834;SOR=0.282 GT:AD:DP:GQ:PL 1/1:1,161:162:99:3723,256,0
CP000253.1 681807 . C A 3495.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.525;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9759;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.00;ReadPosRankSum=1.472;SOR=0.775 GT:AD:DP:GQ:PL 1/1:2,150:153:99:3524,247,0
CP000253.1 682156 . G A 90.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:118,9,0
CP000253.1 682262 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 682428 . T C 223.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:252,18,0
CP000253.1 682566 . T G 585.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:614,42,0
CP000253.1 682812 . T G 2220.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1218;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2249,160,0
CP000253.1 682922 . T A 2395.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5386;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2424,172,0
CP000253.1 683676 . T G 5566.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8020;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,243:243:99:5595,388,0
CP000253.1 684063 . C T 337.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:366,27,0
CP000253.1 684433 . A G 1880.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1501;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1909,135,0
CP000253.1 684456 . C T 2057.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5135;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2086,147,0
CP000253.1 684532 . C T 3337.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6231;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3366,235,0
CP000253.1 684547 . G A 3496.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3525,244,0
CP000253.1 684550 . A T 3480.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.899;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5508;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.84;ReadPosRankSum=-0.119;SOR=0.264 GT:AD:DP:GQ:PL 1/1:1,145:146:99:3509,247,0
CP000253.1 684610 . T A 4061.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0657;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,173:176:99:4090,283,0
CP000253.1 684630 . A G 4294.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,185:187:99:4323,298,0
CP000253.1 684692 . A G 4558.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,190:191:99:4587,319,0
CP000253.1 684739 . A G 4237.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4066;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4266,298,0
CP000253.1 684755 . A G 3999.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4028,280,0
CP000253.1 684838 . A G 2800.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4190;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2829,199,0
CP000253.1 684938 . T C 1117.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.94;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:84:1146,84,0
CP000253.1 685003 . T A 1956.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.18;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1985,141,0
CP000253.1 685067 . G A 2232.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2261,160,0
CP000253.1 685703 . T A 220.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:249,18,0
CP000253.1 688296 . A G 733.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:54:762,54,0
CP000253.1 689106 . A G 956.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:66:985,66,0
CP000253.1 689267 . G T 329.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:358,24,0
CP000253.1 689407 . T A 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 689608 . T G 2270.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2299,160,0
CP000253.1 689612 . C G 2202.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1517;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2231,157,0
CP000253.1 689613 . A C 2192.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,91:93:99:2221,157,0
CP000253.1 689629 . C T 2347.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8061;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2376,166,0
CP000253.1 690033 . A G 1494.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1523,108,0
CP000253.1 690155 . A C 469.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:36:498,36,0
CP000253.1 690164 . A G 642.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:48:671,48,0
CP000253.1 690437 . G A 5394.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1783;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,236:236:99:5423,370,0
CP000253.1 691149 . G A 1632.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1661,117,0
CP000253.1 691520 . A T 1135.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:84:1164,84,0
CP000253.1 691961 . A G 3559.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6397;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3588,259,0
CP000253.1 692120 . C T 3818.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3847,277,0
CP000253.1 692132 . C G 3688.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3717,265,0
CP000253.1 692138 . G A 3751.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3780,268,0
CP000253.1 692153 . A T 3861.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.477;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2080;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.75;ReadPosRankSum=0.172;SOR=0.105 GT:AD:DP:GQ:PL 1/1:2,148:152:99:3890,280,0
CP000253.1 692162 . T C 3906.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0290;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3935,283,0
CP000253.1 692165 . G A 3744.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.567;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5688;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.13;ReadPosRankSum=-0.545;SOR=0.707 GT:AD:DP:GQ:PL 1/1:2,147:150:99:3773,271,0
CP000253.1 692168 . T C 4082.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4550;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.51;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4111,298,0
CP000253.1 692182 . C A 4200.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4229,304,0
CP000253.1 692186 . C T 4042.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1153;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:157:99:4071,292,0
CP000253.1 692195 . T C 3975.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3626;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,156:161:99:4004,286,0
CP000253.1 692204 . G A 4170.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,162:164:99:4199,298,0
CP000253.1 692219 . A T 3852.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.400;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7868;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.08;ReadPosRankSum=1.091;SOR=0.826 GT:AD:DP:GQ:PL 1/1:2,158:160:99:3881,280,0
CP000253.1 692222 . C T 4150.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7868;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4179,298,0
CP000253.1 692318 . T C 4178.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7369;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,161:163:99:4207,304,0
CP000253.1 692363 . C T 4080.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,160:161:99:4109,298,0
CP000253.1 692459 . T C 3857.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3121;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,147:148:99:3886,277,0
CP000253.1 692507 . C T 3287.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.73;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3316,238,0
CP000253.1 692510 . A G 3305.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5658;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3334,238,0
CP000253.1 692513 . T C 3258.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.49;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,123:124:99:3287,235,0
CP000253.1 692525 . T C 3510.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.414;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1140;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.63;ReadPosRankSum=-0.341;SOR=0.973 GT:AD:DP:GQ:PL 1/1:2,135:137:99:3539,217,0
CP000253.1 692537 . G A 3547.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3576,256,0
CP000253.1 692549 . A G 3760.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6697;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3789,271,0
CP000253.1 692579 . T C 3769.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5252;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,150:152:99:3798,274,0
CP000253.1 693018 . T C 5056.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.513;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.85;ReadPosRankSum=1.379;SOR=0.423 GT:AD:DP:GQ:PL 1/1:3,209:213:99:5085,329,0
CP000253.1 693257 . G A 2637.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8991;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=1.134 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2666,190,0
CP000253.1 693283 . C T 1777.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1806,129,0
CP000253.1 693536 . T C 2350.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2379,166,0
CP000253.1 693599 . A C 2536.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.644;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3575;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.93;ReadPosRankSum=-0.627;SOR=0.105 GT:AD:DP:GQ:PL 1/1:2,104:107:99:2565,181,0
CP000253.1 693710 . A T 1857.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.824;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.13;ReadPosRankSum=-1.148;SOR=0.655 GT:AD:DP:GQ:PL 1/1:1,76:77:99:1886,132,0
CP000253.1 693800 . C T 1658.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1687,120,0
CP000253.1 693824 . C T 1315.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1344,93,0
CP000253.1 693827 . T A 1340.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:96:1369,96,0
CP000253.1 693828 . T C 1337.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:96:1366,96,0
CP000253.1 693830 . A T 1360.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:96:1389,96,0
CP000253.1 693833 . C T 1317.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1346,93,0
CP000253.1 693938 . T A 648.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.21;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:24:48:677,48,0
CP000253.1 693966 . T C 417.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:33:446,33,0
CP000253.1 694041 . A G 212.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.41;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:18:241,18,0
CP000253.1 694301 . T G 2768.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2797,199,0
CP000253.1 694473 . G A 3859.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7117;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=1.026 GT:AD:DP:GQ:PL 1/1:0,157:158:99:3888,271,0
CP000253.1 694518 . G T 3716.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8698;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,154:155:99:3745,262,0
CP000253.1 694536 . T A 3755.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3784,265,0
CP000253.1 694714 . G A 3644.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1194;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.31;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,144:146:99:3673,262,0
CP000253.1 694747 . A G 3423.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.645;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2011;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=-0.062;QD=25.55;ReadPosRankSum=0.817;SOR=0.125 GT:AD:DP:GQ:PL 1/1:2,132:134:99:3452,247,0
CP000253.1 694815 . A G 3299.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.784;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.44;ReadPosRankSum=0.347;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,134:137:99:3328,235,0
CP000253.1 694836 . T C 3210.76 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3239,229,0
CP000253.1 694974 . T A 3174.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6308;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3203,226,0
CP000253.1 695866 . A G 3560.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0697;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3589,244,0
CP000253.1 695986 . T G 3287.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3316,229,0
CP000253.1 696836 . G A 2473.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2502,172,0
CP000253.1 697070 . A T 91.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:119,9,0
CP000253.1 697094 . T C 91.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:119,9,0
CP000253.1 697762 . G A 2340.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8937;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2369,163,0
CP000253.1 697948 . A G 485.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:514,36,0
CP000253.1 698276 . T A 2394.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2423,166,0
CP000253.1 698877 . T C 187.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.88;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:216,15,0
CP000253.1 698930 . G A 403.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:432,30,0
CP000253.1 699078 . C A 224.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:253,18,0
CP000253.1 699448 . C T 4685.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9421;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,208:208:99:4714,322,0
CP000253.1 699570 . T C 4675.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,201:203:99:4704,325,0
CP000253.1 699788 . A T 581.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:610,42,0
CP000253.1 700119 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 701545 . G A 538.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:567,39,0
CP000253.1 701666 . A T 117.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:145,12,0
CP000253.1 701700 . A T 179.90 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.200;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.99;ReadPosRankSum=0.967;SOR=1.609 GT:AD:DP:GQ:PL 1/1:2,7:9:15:208,15,0
CP000253.1 702109 . A G 1380.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1409,99,0
CP000253.1 702117 . C T 711.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:51:740,51,0
CP000253.1 702122 . G A 703.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:51:732,51,0
CP000253.1 702123 . T C 701.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:51:730,51,0
CP000253.1 702124 . T A 697.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:51:726,51,0
CP000253.1 702126 . T A 703.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:51:732,51,0
CP000253.1 702128 . A G 662.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.619;DP=28;Dels=0.00;ExcessHet=3.0103;FS=4.058;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=0.744;SOR=1.074 GT:AD:DP:GQ:PL 1/1:1,27:28:48:691,48,0
CP000253.1 702129 . T C 703.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.023;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.13;ReadPosRankSum=0.744;SOR=1.074 GT:AD:DP:GQ:PL 1/1:1,27:28:51:732,51,0
CP000253.1 702140 . G A 706.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:51:735,51,0
CP000253.1 702279 . G T 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.17;MQ0=0;MQRankSum=-0.967;QD=3.71;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:35:39,0,35
CP000253.1 702324 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 702344 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 702353 . A G 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 702356 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 702359 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 702432 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 702670 . G T 553.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:39:582,39,0
CP000253.1 703023 . C A 14.68 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=7.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:41,3,0
CP000253.1 703105 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 703146 . G A 664.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:48:693,48,0
CP000253.1 703389 . T G 5777.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.964 GT:AD:DP:GQ:PL 1/1:0,239:240:99:5806,406,0
CP000253.1 703617 . G A 4785.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.875;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.46;ReadPosRankSum=1.253;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,187:188:99:4814,343,0
CP000253.1 703872 . G A 4870.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9020;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=1.271;SOR=0.232 GT:AD:DP:GQ:PL 1/1:1,190:192:99:4899,346,0
CP000253.1 704175 . T A 2698.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1610;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2727,193,0
CP000253.1 704878 . G A 2589.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7214;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2618,181,0
CP000253.1 705138 . G A 208.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.81;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:237,18,0
CP000253.1 706070 . C T 2120.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2149,147,0
CP000253.1 706112 . C T 2475.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4498;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2504,172,0
CP000253.1 706183 . T C 2381.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4344;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2410,166,0
CP000253.1 706260 . C T 1895.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1924,135,0
CP000253.1 706581 . A G 3402.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.923;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5457;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.31;ReadPosRankSum=0.131;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,145:146:99:3431,238,0
CP000253.1 706703 . A C 1737.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.067;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.19;ReadPosRankSum=1.683;SOR=0.507 GT:AD:DP:GQ:PL 1/1:1,68:69:99:1766,123,0
CP000253.1 706800 . A T 1437.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1466,102,0
CP000253.1 706890 . C T 1126.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1155,81,0
CP000253.1 706971 . G A 1390.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1419,99,0
CP000253.1 707793 . C T 276.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:305,21,0
CP000253.1 707913 . T C 499.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.73;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:528,36,0
CP000253.1 708305 . T A 329.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:358,24,0
CP000253.1 708368 . G A 355.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:384,27,0
CP000253.1 708523 . T A 1191.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,46:46:87:1220,87,0
CP000253.1 708728 . C T 3412.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8380;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,150:151:99:3441,235,0
CP000253.1 708812 . A T 3284.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9687;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3313,232,0
CP000253.1 709150 . C A 3058.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.865;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.28;ReadPosRankSum=-0.100;SOR=0.665 GT:AD:DP:GQ:PL 1/1:1,120:121:99:3087,217,0
CP000253.1 709352 . G A 2954.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2983,208,0
CP000253.1 709400 . A G 2747.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7507;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2776,196,0
CP000253.1 709461 . C T 1820.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.408;DP=82;Dels=0.00;ExcessHet=3.0103;FS=3.302;HaplotypeScore=2.6254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.20;ReadPosRankSum=1.437;SOR=0.670 GT:AD:DP:GQ:PL 1/1:1,81:82:99:1849,104,0
CP000253.1 709482 . C T 1789.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.878;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0799;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.95;ReadPosRankSum=-0.067;SOR=0.431 GT:AD:DP:GQ:PL 1/1:1,77:78:99:1818,126,0
CP000253.1 709997 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 710632 . G A 514.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:543,39,0
CP000253.1 710798 . C T 960.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:69:989,69,0
CP000253.1 711430 . A G 1993.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2022,141,0
CP000253.1 711442 . A G 1950.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1979,138,0
CP000253.1 711487 . A G 1260.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.911;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8531;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.92;ReadPosRankSum=0.663;SOR=0.287 GT:AD:DP:GQ:PL 1/1:1,54:55:90:1289,90,0
CP000253.1 711643 . G A 3047.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.916;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.93;ReadPosRankSum=0.663;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,138:139:99:3076,211,0
CP000253.1 711781 . C T 1954.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5487;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.47;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,87:87:99:1983,135,0
CP000253.1 712097 . C T 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 712168 . T G 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 712200 . G A 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 712228 . A T 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 712471 . A G 2285.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2314,169,0
CP000253.1 712474 . A G 2297.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.959;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.41;ReadPosRankSum=0.400;SOR=1.108 GT:AD:DP:GQ:PL 1/1:1,86:88:99:2326,169,0
CP000253.1 712732 . G A 3242.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7034;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3271,229,0
CP000253.1 712987 . T A 2262.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7061;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2291,160,0
CP000253.1 713594 . A G 3679.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.795;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.14;ReadPosRankSum=-0.774;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,158:159:99:3708,259,0
CP000253.1 714006 . C A 342.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:371,27,0
CP000253.1 714158 . T C 2180.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2209,154,0
CP000253.1 714300 . G A 3994.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1131;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,167:168:99:4023,277,0
CP000253.1 714930 . C T 822.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:851,60,0
CP000253.1 715146 . C T 1546.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1575,108,0
CP000253.1 716046 . A G 1888.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1917,132,0
CP000253.1 716145 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:220,15,0
CP000253.1 716534 . A G 1119.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:46:81:1148,81,0
CP000253.1 716618 . A T 1252.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1281,90,0
CP000253.1 717020 . C T 3767.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4939;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,162:165:99:3796,262,0
CP000253.1 717118 . T A 3821.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6906;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,160:161:99:3850,268,0
CP000253.1 717315 . C T 3096.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0188;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3125,220,0
CP000253.1 717690 . A G 2608.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=1.008 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2637,184,0
CP000253.1 717762 . A G 1243.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,46:47:90:1272,90,0
CP000253.1 717765 . G A 1164.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.203 GT:AD:DP:GQ:PL 1/1:0,46:46:84:1193,84,0
CP000253.1 717900 . T C 307.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:24:336,24,0
CP000253.1 717969 . A T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 718047 . C G 482.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:511,36,0
CP000253.1 718083 . C T 524.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:39:553,39,0
CP000253.1 718104 . A G 488.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:517,36,0
CP000253.1 718950 . G A 362.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:391,27,0
CP000253.1 719144 . C T 2824.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4249;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,117:119:99:2853,199,0
CP000253.1 719282 . T A 3734.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.34;ReadPosRankSum=0.910;SOR=0.283 GT:AD:DP:GQ:PL 1/1:1,159:160:99:3763,262,0
CP000253.1 720029 . C T 962.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.098;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.39;ReadPosRankSum=-1.068;SOR=0.954 GT:AD:DP:GQ:PL 1/1:2,41:44:30:991,30,0
CP000253.1 720077 . G T 1423.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.181;DP=159;Dels=0.00;ExcessHet=3.0103;FS=3.784;HaplotypeScore=14.5187;MLEAC=1;MLEAF=0.500;MQ=51.02;MQ0=3;MQRankSum=7.689;QD=9.01;ReadPosRankSum=6.420;SOR=0.899 GT:AD:DP:GQ:PL 0/1:90,68:159:99:1452,0,1680
CP000253.1 720115 . T C 1379.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.028;DP=166;Dels=0.00;ExcessHet=3.0103;FS=1.239;HaplotypeScore=68.7185;MLEAC=1;MLEAF=0.500;MQ=49.79;MQ0=3;MQRankSum=8.037;QD=8.31;ReadPosRankSum=5.295;SOR=0.695 GT:AD:DP:GQ:PL 0/1:98,68:166:99:1408,0,1666
CP000253.1 720124 . A T 1265.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.255;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.602;HaplotypeScore=6.6080;MLEAC=1;MLEAF=0.500;MQ=49.22;MQ0=3;MQRankSum=7.775;QD=7.86;ReadPosRankSum=5.961;SOR=0.720 GT:AD:DP:GQ:PL 0/1:99,62:161:99:1294,0,1711
CP000253.1 720134 . C G 1305.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.894;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.604;HaplotypeScore=13.3549;MLEAC=1;MLEAF=0.500;MQ=49.38;MQ0=1;MQRankSum=7.879;QD=8.32;ReadPosRankSum=5.901;SOR=0.719 GT:AD:DP:GQ:PL 0/1:95,62:157:99:1334,0,1644
CP000253.1 720137 . T A 1241.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.380;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3549;MLEAC=1;MLEAF=0.500;MQ=49.38;MQ0=1;MQRankSum=7.801;QD=8.01;ReadPosRankSum=4.799;SOR=0.719 GT:AD:DP:GQ:PL 0/1:93,62:157:99:1270,0,1695
CP000253.1 720144 . T G 3541.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7044;MLEAC=2;MLEAF=1.00;MQ=49.45;MQ0=1;QD=22.00;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,161:161:99:3570,256,0
CP000253.1 720235 . T C 799.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.140;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5450;MLEAC=1;MLEAF=0.500;MQ=51.76;MQ0=4;MQRankSum=-8.289;QD=4.97;ReadPosRankSum=4.925;SOR=0.674 GT:AD:DP:GQ:PL 0/1:103,58:161:99:828,0,2051
CP000253.1 720245 . T A 583.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.536;DP=155;Dels=0.00;ExcessHet=3.0103;FS=1.377;HaplotypeScore=14.2072;MLEAC=1;MLEAF=0.500;MQ=52.65;MQ0=4;MQRankSum=-8.086;QD=3.77;ReadPosRankSum=4.220;SOR=0.844 GT:AD:DP:GQ:PL 0/1:107,48:155:99:612,0,2175
CP000253.1 720380 . C G 4025.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4054,286,0
CP000253.1 720607 . G A 5042.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3907;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,211:212:99:5071,349,0
CP000253.1 720608 . T C 5026.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,212:213:99:5055,349,0
CP000253.1 721113 . G C 642.94 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.128;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8602;MLEAC=2;MLEAF=1.00;MQ=54.35;MQ0=2;MQRankSum=3.046;QD=18.37;ReadPosRankSum=-0.028;SOR=0.250 GT:AD:DP:GQ:PL 1/1:6,29:35:14:671,14,0
CP000253.1 721129 . A G 727.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.356;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.49;MQ0=2;MQRankSum=3.827;QD=22.74;ReadPosRankSum=0.347;SOR=0.465 GT:AD:DP:GQ:PL 1/1:5,27:32:54:756,54,0
CP000253.1 721212 . G T 1024.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.28;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:78:1053,78,0
CP000253.1 721300 . T C 1716.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1745,123,0
CP000253.1 721543 . T C 3036.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3420;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3065,211,0
CP000253.1 721591 . G A 2812.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1059;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2841,196,0
CP000253.1 722220 . T A 1183.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1212,84,0
CP000253.1 722230 . G A 1113.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:78:1142,78,0
CP000253.1 722579 . A C 138.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:166,12,0
CP000253.1 722583 . A C 138.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:166,12,0
CP000253.1 722590 . T G 136.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:164,12,0
CP000253.1 722634 . T C 137.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.41;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:165,12,0
CP000253.1 722647 . T C 50.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:3:6:78,6,0
CP000253.1 723048 . A G 1849.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.052;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.41;ReadPosRankSum=1.733;SOR=0.386 GT:AD:DP:GQ:PL 1/1:1,78:79:99:1878,129,0
CP000253.1 723194 . G A 679.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:708,48,0
CP000253.1 723537 . A G 1798.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1827,129,0
CP000253.1 725230 . T C 2310.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3868;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2339,163,0
CP000253.1 725473 . T A 2531.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.44;ReadPosRankSum=-1.431;SOR=0.280 GT:AD:DP:GQ:PL 1/1:1,107:108:99:2560,178,0
CP000253.1 725827 . T A 357.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:27:386,27,0
CP000253.1 726087 . G C 231.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:260,18,0
CP000253.1 726571 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 727294 . C T 1160.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1189,84,0
CP000253.1 727406 . C T 1259.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1288,90,0
CP000253.1 730001 . C T 1740.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1769,123,0
CP000253.1 730417 . T C 48.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:76,6,0
CP000253.1 730870 . T C 41.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0
CP000253.1 731160 . G A 759.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3399;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:788,54,0
CP000253.1 732379 . C T 139.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:167,12,0
CP000253.1 732861 . G A 1248.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1277,90,0
CP000253.1 733116 . G T 473.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:502,36,0
CP000253.1 734389 . A T 489.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:518,36,0
CP000253.1 735026 . T C 2949.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.942;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.60;ReadPosRankSum=0.500;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,124:125:99:2978,205,0
CP000253.1 736157 . T A 2754.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2783,193,0
CP000253.1 736193 . A G 2849.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4271;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,127:127:99:2878,199,0
CP000253.1 736316 . G A 2654.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9054;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2683,187,0
CP000253.1 736652 . T C 759.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:54:788,54,0
CP000253.1 737841 . G A 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 738720 . A G 393.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:30:422,30,0
CP000253.1 738817 . C A 278.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:307,24,0
CP000253.1 738836 . T C 283.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:312,24,0
CP000253.1 738881 . A C 379.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:33:408,33,0
CP000253.1 739021 . A G 2558.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2587,181,0
CP000253.1 739327 . C T 4306.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4338;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,186:188:99:4335,301,0
CP000253.1 739604 . A C 2246.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2275,160,0
CP000253.1 740032 . G A 4861.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,203:205:99:4890,340,0
CP000253.1 740120 . G A 4070.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8615;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4099,286,0
CP000253.1 740246 . A T 3013.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.9027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3042,214,0
CP000253.1 740285 . G T 3233.06 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.991;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.49;ReadPosRankSum=1.195;SOR=0.345 GT:AD:DP:GQ:PL 1/1:1,131:132:99:3261,226,0
CP000253.1 740458 . G A 3490.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5560;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3519,250,0
CP000253.1 741314 . A G 2417.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2446,181,0
CP000253.1 741710 . T C 2403.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.919;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.57;ReadPosRankSum=1.734;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,101:102:99:2432,169,0
CP000253.1 741773 . C T 3524.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.957;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.34;ReadPosRankSum=-1.138;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,150:151:99:3553,244,0
CP000253.1 741920 . C T 2762.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7486;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2791,193,0
CP000253.1 742111 . G T 2011.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.843;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1380;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.95;ReadPosRankSum=-1.548;SOR=0.253 GT:AD:DP:GQ:PL 1/1:1,83:85:99:2040,144,0
CP000253.1 742273 . G A 2622.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2651,187,0
CP000253.1 742348 . G A 2277.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7994;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2306,163,0
CP000253.1 743407 . T A 1444.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.986 GT:AD:DP:GQ:PL 1/1:0,60:61:99:1473,105,0
CP000253.1 743626 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 744269 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 744893 . G A 2751.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6792;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2780,202,0
CP000253.1 745675 . T A 3436.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.951;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7291;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.22;ReadPosRankSum=-0.310;SOR=0.264 GT:AD:DP:GQ:PL 1/1:1,147:148:99:3465,238,0
CP000253.1 745875 . T C 2187.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:94:99:2216,157,0
CP000253.1 746495 . A T 1024.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.204;DP=181;Dels=0.00;ExcessHet=3.0103;FS=16.273;HaplotypeScore=1.6208;MLEAC=1;MLEAF=0.500;MQ=59.95;MQ0=0;MQRankSum=-1.502;QD=5.66;ReadPosRankSum=12.978;SOR=1.131 GT:AD:DP:GQ:PL 0/1:126,55:181:99:1053,0,2759
CP000253.1 746627 . C T 676.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.83;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:705,48,0
CP000253.1 746663 . T A 684.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:29:51:713,51,0
CP000253.1 746677 . C G 695.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:51:724,51,0
CP000253.1 746865 . C T 253.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:282,21,0
CP000253.1 746993 . T A 601.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.66;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:45:630,45,0
CP000253.1 747274 . A T 4591.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,196:197:99:4620,319,0
CP000253.1 747354 . A C 4577.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1093;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.24;ReadPosRankSum=-0.422;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,196:197:99:4606,319,0
CP000253.1 747355 . T G 4600.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2153;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,194:195:99:4629,319,0
CP000253.1 747386 . A G 4470.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4732;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,190:192:99:4499,310,0
CP000253.1 747473 . A T 4055.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,172:175:99:4084,283,0
CP000253.1 747509 . G A 4094.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.893;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.13;ReadPosRankSum=0.999;SOR=0.370 GT:AD:DP:GQ:PL 1/1:1,176:177:99:4123,283,0
CP000253.1 747592 . A G 3220.76 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0335;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3249,226,0
CP000253.1 747638 . A G 2864.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2893,202,0
CP000253.1 747773 . G T 571.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7860;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:600,42,0
CP000253.1 748113 . A G 2340.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.863;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.73;ReadPosRankSum=1.263;SOR=0.348 GT:AD:DP:GQ:PL 1/1:1,102:103:99:2369,163,0
CP000253.1 748142 . G A 2232.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0881;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.33;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2261,157,0
CP000253.1 748776 . T C 1404.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1433,99,0
CP000253.1 749481 . C A 3143.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3172,217,0
CP000253.1 749847 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 750731 . T C 5390.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.773;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3856;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.75;ReadPosRankSum=1.710;SOR=0.484 GT:AD:DP:GQ:PL 1/1:1,226:228:99:5419,382,0
CP000253.1 750897 . T C 3503.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,133:135:99:3532,256,0
CP000253.1 750947 . G A 3453.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.996;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5846;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=1.733;SOR=0.320 GT:AD:DP:GQ:PL 1/1:1,132:133:99:3482,247,0
CP000253.1 751490 . G A 3187.75 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.411;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.52;ReadPosRankSum=0.748;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,128:130:99:3216,229,0
CP000253.1 751943 . C T 3876.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.215;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7826;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.21;ReadPosRankSum=0.656;SOR=0.807 GT:AD:DP:GQ:PL 1/1:2,165:169:99:3905,235,0
CP000253.1 752183 . A G 2681.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2710,196,0
CP000253.1 752249 . T C 1380.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1409,99,0
CP000253.1 752658 . T A 179.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:208,15,0
CP000253.1 752742 . G A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 752767 . A T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 752782 . T G 177.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:206,15,0
CP000253.1 752885 . T C 380.77 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.29;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:13:30:409,30,0
CP000253.1 754127 . T C 397.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:426,30,0
CP000253.1 754128 . A G 399.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:428,30,0
CP000253.1 754314 . T A 3803.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=1.106 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3832,268,0
CP000253.1 754418 . T C 5615.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9068;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,225:225:99:5644,394,0
CP000253.1 754685 . A G 6154.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3923;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,244:245:99:6183,442,0
CP000253.1 754728 . A G 6176.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8184;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.91;ReadPosRankSum=0.363;SOR=0.728 GT:AD:DP:GQ:PL 1/1:1,247:250:99:6205,439,0
CP000253.1 754751 . C T 5871.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.827;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.0223;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.88;ReadPosRankSum=-0.426;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,235:238:99:5900,418,0
CP000253.1 754865 . T C 3862.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.672;DP=156;Dels=0.00;ExcessHet=3.0103;FS=3.552;HaplotypeScore=17.1359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.733;SOR=0.629 GT:AD:DP:GQ:PL 1/1:2,154:156:99:3891,245,0
CP000253.1 755006 . T C 2239.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2268,157,0
CP000253.1 755066 . T G 1060.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.289;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.22;ReadPosRankSum=-1.263;SOR=0.963 GT:AD:DP:GQ:PL 1/1:2,48:50:37:1089,37,0
CP000253.1 755440 . A T 928.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:66:957,66,0
CP000253.1 755473 . A T 1390.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5707;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:64:96:1419,96,0
CP000253.1 755527 . C T 1440.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1469,99,0
CP000253.1 756247 . T C 310.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:339,24,0
CP000253.1 756385 . A G 2026.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,83:84:99:2055,144,0
CP000253.1 756416 . A G 2184.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2213,154,0
CP000253.1 756541 . A G 3148.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1641;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,131:133:99:3177,223,0
CP000253.1 756553 . A T 3003.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3032,214,0
CP000253.1 756595 . T A 3236.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3265,229,0
CP000253.1 756667 . G A 3501.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3530,247,0
CP000253.1 756688 . A G 3674.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9045;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3703,262,0
CP000253.1 756769 . A T 3523.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.988;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2184;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.97;ReadPosRankSum=0.307;SOR=0.400 GT:AD:DP:GQ:PL 1/1:1,146:147:99:3552,247,0
CP000253.1 757075 . G T 3703.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.739;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1197;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=27.44;ReadPosRankSum=0.449;SOR=0.554 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3732,274,0
CP000253.1 757441 . A G 4244.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.68;SOR=1.260 GT:AD:DP:GQ:PL 1/1:0,143:144:99:4273,310,0
CP000253.1 757479 . G T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 758709 . G A 3443.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8698;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.77;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3472,253,0
CP000253.1 758769 . G A 4440.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4469,316,0
CP000253.1 758937 . G A 5812.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9211;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,240:240:99:5841,406,0
CP000253.1 758997 . A G 5890.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.964 GT:AD:DP:GQ:PL 1/1:0,239:239:99:5919,418,0
CP000253.1 759129 . T C 2634.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7743;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=1.072 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2663,187,0
CP000253.1 759252 . G A 1766.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6841;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1795,126,0
CP000253.1 760339 . C G 4510.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4539,319,0
CP000253.1 760369 . C T 3998.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4621;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,162:164:99:4027,286,0
CP000253.1 760867 . T C 4408.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.926 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4437,316,0
CP000253.1 760879 . C T 4571.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3583;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4600,325,0
CP000253.1 761099 . T C 3424.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5229;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3453,241,0
CP000253.1 761152 . A G 2403.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.833;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0283;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.78;ReadPosRankSum=1.554;SOR=0.394 GT:AD:DP:GQ:PL 1/1:1,96:97:99:2432,175,0
CP000253.1 761344 . T G 2349.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6288;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2378,169,0
CP000253.1 761368 . G A 2269.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8800;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2298,160,0
CP000253.1 761371 . G A 2324.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8800;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2353,163,0
CP000253.1 761386 . T G 2259.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.721;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.60;ReadPosRankSum=-0.208;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,99:100:99:2288,137,0
CP000253.1 761389 . T A 2335.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4324;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2364,163,0
CP000253.1 761458 . A C 2564.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.029;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.11;ReadPosRankSum=0.515;SOR=0.339 GT:AD:DP:GQ:PL 1/1:1,110:111:99:2593,181,0
CP000253.1 761534 . G A 2090.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1308;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;MQRankSum=0.000;QD=23.23;ReadPosRankSum=-1.541;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,89:93:99:2119,147,0
CP000253.1 761731 . A G 2133.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:89:99:2162,154,0
CP000253.1 762226 . T C 2824.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.176;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6032;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.74;ReadPosRankSum=-2.016;SOR=0.978 GT:AD:DP:GQ:PL 1/1:2,117:119:99:2853,160,0
CP000253.1 762232 . G A 2676.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5682;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,106:108:99:2705,190,0
CP000253.1 762262 . T C 1832.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4416;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1861,132,0
CP000253.1 762283 . C T 1427.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1456,102,0
CP000253.1 762304 . T C 1405.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.742;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=0.805;SOR=0.761 GT:AD:DP:GQ:PL 1/1:1,55:56:99:1434,102,0
CP000253.1 762361 . A C 1401.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1430,102,0
CP000253.1 762527 . A G 598.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.18;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:627,45,0
CP000253.1 762532 . A G 641.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:670,48,0
CP000253.1 762541 . T C 645.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:674,48,0
CP000253.1 762547 . G A 633.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2970;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:662,48,0
CP000253.1 762631 . A T 796.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.47;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:60:825,60,0
CP000253.1 762633 . T C 837.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.93;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,30:30:63:866,63,0
CP000253.1 762652 . G A 771.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.095;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.3157;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.70;ReadPosRankSum=-1.282;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,32:34:18:800,18,0
CP000253.1 762817 . G C 1316.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6775;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:93:1345,93,0
CP000253.1 762857 . T C 1452.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2520;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=1;QD=23.43;SOR=0.725 GT:AD:DP:GQ:PL 1/1:1,61:62:99:1481,102,0
CP000253.1 762859 . A G 1495.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2520;MLEAC=2;MLEAF=1.00;MQ=59.53;MQ0=1;QD=23.74;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1524,105,0
CP000253.1 762886 . T C 1423.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=59.53;MQ0=1;QD=22.25;SOR=0.724 GT:AD:DP:GQ:PL 1/1:1,63:64:99:1452,102,0
CP000253.1 762887 . T C 1446.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=59.53;MQ0=1;QD=22.61;SOR=0.724 GT:AD:DP:GQ:PL 1/1:1,63:64:99:1475,105,0
CP000253.1 762938 . C A 1539.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.15;MQ0=0;QD=26.10;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1568,111,0
CP000253.1 762973 . T A 926.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.26;SOR=1.418 GT:AD:DP:GQ:PL 1/1:0,34:34:69:955,69,0
CP000253.1 763271 . G A 3415.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3444,244,0
CP000253.1 764036 . G T 2907.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3423;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,129:129:99:2936,202,0
CP000253.1 764555 . T C 1299.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1328,93,0
CP000253.1 764953 . G T 760.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:54:789,54,0
CP000253.1 764960 . G A 751.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:54:780,54,0
CP000253.1 765140 . G A 386.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3804;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:30:415,30,0
CP000253.1 765843 . T C 5007.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.899;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3495;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=15.166;QD=21.87;ReadPosRankSum=-0.416;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,228:230:99:5036,343,0
CP000253.1 765978 . A C 5140.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.938;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.85;ReadPosRankSum=-1.009;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,224:225:99:5169,355,0
CP000253.1 766549 . T C 257.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:14:21:286,21,0
CP000253.1 766641 . A G 1072.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:75:1101,75,0
CP000253.1 766656 . T A 994.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.945;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.17;ReadPosRankSum=0.961;SOR=0.359 GT:AD:DP:GQ:PL 1/1:1,46:47:69:1023,69,0
CP000253.1 766684 . G T 1321.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:93:1350,93,0
CP000253.1 767274 . T C 2256.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3856;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2285,166,0
CP000253.1 767415 . T C 4675.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.913 GT:AD:DP:GQ:PL 1/1:0,189:191:99:4704,337,0
CP000253.1 767712 . A G 3735.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7846;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=1.037 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3764,268,0
CP000253.1 767733 . A G 3133.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1840;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3162,223,0
CP000253.1 767790 . C T 2603.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1192;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2632,184,0
CP000253.1 767895 . A G 1310.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=1.157 GT:AD:DP:GQ:PL 1/1:0,50:52:96:1339,96,0
CP000253.1 767915 . C T 945.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=1.236 GT:AD:DP:GQ:PL 1/1:0,39:39:69:974,69,0
CP000253.1 767921 . A G 1008.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=1.236 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1037,75,0
CP000253.1 767955 . A C 624.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.780;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.99;ReadPosRankSum=0.764;SOR=1.340 GT:AD:DP:GQ:PL 1/1:1,24:25:48:653,48,0
CP000253.1 767956 . G T 490.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.05;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:36:519,36,0
CP000253.1 767957 . C T 492.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.923;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.47;ReadPosRankSum=1.241;SOR=0.849 GT:AD:DP:GQ:PL 1/1:1,20:21:36:521,36,0
CP000253.1 768141 . A T 200.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.081;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=31.37;MQ0=0;MQRankSum=-0.756;QD=8.37;ReadPosRankSum=-1.048;SOR=0.569 GT:AD:DP:GQ:PL 0/1:4,20:25:21:229,0,21
CP000253.1 768245 . C A 86.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.620;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=23.07;MQ0=0;MQRankSum=-1.903;QD=3.62;ReadPosRankSum=2.143;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,22:24:30:115,0,30
CP000253.1 768258 . G C 925.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.531;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3857;MLEAC=1;MLEAF=0.500;MQ=32.91;MQ0=19;MQRankSum=4.117;QD=11.57;ReadPosRankSum=-6.378;SOR=0.639 GT:AD:DP:GQ:PL 0/1:40,40:81:77:954,0,77
CP000253.1 768284 . C T 1458.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.554;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8988;MLEAC=2;MLEAF=1.00;MQ=39.56;MQ0=19;MQRankSum=-0.115;QD=14.89;ReadPosRankSum=2.225;SOR=0.948 GT:AD:DP:GQ:PL 1/1:18,80:98:73:1487,73,0
CP000253.1 768337 . T C 1828.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.491;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6533;MLEAC=2;MLEAF=1.00;MQ=50.68;MQ0=4;MQRankSum=2.106;QD=23.75;ReadPosRankSum=1.934;SOR=0.722 GT:AD:DP:GQ:PL 1/1:4,73:78:99:1857,100,0
CP000253.1 768359 . C T 212.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.461;DP=106;Dels=0.00;ExcessHet=3.0103;FS=4.396;HaplotypeScore=17.4448;MLEAC=1;MLEAF=0.500;MQ=45.31;MQ0=4;MQRankSum=-6.353;QD=2.03;ReadPosRankSum=-7.696;SOR=1.205 GT:AD:DP:GQ:PL 0/1:79,26:106:99:241,0,1643
CP000253.1 768393 . T C 2176.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.074;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5859;MLEAC=2;MLEAF=1.00;MQ=46.18;MQ0=3;MQRankSum=1.002;QD=21.34;ReadPosRankSum=0.837;SOR=0.450 GT:AD:DP:GQ:PL 1/1:3,99:103:99:2205,109,0
CP000253.1 768396 . T C 2137.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.044;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5817;MLEAC=2;MLEAF=1.00;MQ=46.18;MQ0=3;MQRankSum=0.958;QD=20.76;ReadPosRankSum=0.806;SOR=0.464 GT:AD:DP:GQ:PL 1/1:3,100:103:99:2166,106,0
CP000253.1 768400 . C T 1575.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.413;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5560;MLEAC=1;MLEAF=0.500;MQ=46.18;MQ0=3;MQRankSum=6.235;QD=15.45;ReadPosRankSum=6.653;SOR=0.622 GT:AD:DP:GQ:PL 0/1:34,68:103:99:1604,0,346
CP000253.1 768402 . T A 203.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.781;DP=103;Dels=0.00;ExcessHet=3.0103;FS=3.069;HaplotypeScore=22.8220;MLEAC=1;MLEAF=0.500;MQ=46.18;MQ0=3;MQRankSum=-6.446;QD=1.98;ReadPosRankSum=-5.969;SOR=1.147 GT:AD:DP:GQ:PL 0/1:77,26:103:99:232,0,1787
CP000253.1 768418 . G C 1376.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.914;DP=92;Dels=0.00;ExcessHet=3.0103;FS=1.824;HaplotypeScore=8.8959;MLEAC=1;MLEAF=0.500;MQ=47.38;MQ0=0;MQRankSum=6.902;QD=15.13;ReadPosRankSum=6.834;SOR=0.484 GT:AD:DP:GQ:PL 0/1:31,60:92:99:1405,0,364
CP000253.1 768432 . T C 1272.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.952;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.973;HaplotypeScore=17.4628;MLEAC=1;MLEAF=0.500;MQ=47.72;MQ0=0;MQRankSum=6.982;QD=14.63;ReadPosRankSum=7.379;SOR=0.473 GT:AD:DP:GQ:PL 0/1:32,55:88:99:1301,0,394
CP000253.1 768442 . T C 233.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.805;DP=89;Dels=0.00;ExcessHet=3.0103;FS=3.118;HaplotypeScore=21.8719;MLEAC=1;MLEAF=0.500;MQ=47.39;MQ0=0;MQRankSum=-6.873;QD=2.63;ReadPosRankSum=-4.222;SOR=1.094 GT:AD:DP:GQ:PL 0/1:63,26:89:99:262,0,1403
CP000253.1 768445 . G T 233.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.260;DP=89;Dels=0.00;ExcessHet=3.0103;FS=3.153;HaplotypeScore=17.6277;MLEAC=1;MLEAF=0.500;MQ=47.39;MQ0=0;MQRankSum=-6.874;QD=2.66;ReadPosRankSum=-3.687;SOR=1.134 GT:AD:DP:GQ:PL 0/1:62,26:89:99:262,0,1414
CP000253.1 768446 . G A 1311.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-4.540;DP=89;Dels=0.00;ExcessHet=3.0103;FS=2.893;HaplotypeScore=17.6277;MLEAC=1;MLEAF=0.500;MQ=47.39;MQ0=0;MQRankSum=7.335;QD=14.91;ReadPosRankSum=5.287;SOR=0.446 GT:AD:DP:GQ:PL 0/1:32,56:89:99:1340,0,349
CP000253.1 768447 . A G 230.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.808;DP=89;Dels=0.00;ExcessHet=3.0103;FS=2.375;HaplotypeScore=19.4159;MLEAC=1;MLEAF=0.500;MQ=47.39;MQ0=0;MQRankSum=-6.873;QD=2.59;ReadPosRankSum=-2.956;SOR=1.094 GT:AD:DP:GQ:PL 0/1:63,26:89:99:259,0,1440
CP000253.1 768454 . T A 224.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.783;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.872;HaplotypeScore=26.5799;MLEAC=1;MLEAF=0.500;MQ=47.69;MQ0=0;MQRankSum=-6.929;QD=2.61;ReadPosRankSum=0.535;SOR=0.818 GT:AD:DP:GQ:PL 0/1:59,27:87:99:253,0,1471
CP000253.1 768519 . G T 1713.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.546;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6595;MLEAC=2;MLEAF=1.00;MQ=56.13;MQ0=0;MQRankSum=5.158;QD=21.69;ReadPosRankSum=3.156;SOR=0.660 GT:AD:DP:GQ:PL 1/1:5,74:79:85:1742,85,0
CP000253.1 768542 . C T 1698.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.193;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5345;MLEAC=2;MLEAF=1.00;MQ=57.21;MQ0=0;MQRankSum=2.871;QD=22.35;ReadPosRankSum=1.895;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,75:76:99:1727,123,0
CP000253.1 768549 . C T 1627.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.650;DP=76;Dels=0.00;ExcessHet=3.0103;FS=3.274;HaplotypeScore=78.0601;MLEAC=2;MLEAF=1.00;MQ=57.21;MQ0=0;MQRankSum=1.768;QD=21.42;ReadPosRankSum=0.893;SOR=0.493 GT:AD:DP:GQ:PL 1/1:2,74:76:99:1656,120,0
CP000253.1 768563 . T A 1536.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.995;DP=76;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.5026;MLEAC=2;MLEAF=1.00;MQ=57.21;MQ0=0;MQRankSum=0.947;QD=20.77;ReadPosRankSum=1.947;SOR=0.874 GT:AD:DP:GQ:PL 1/1:4,70:74:45:1565,45,0
CP000253.1 768566 . C G 1549.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.266;DP=76;Dels=0.03;ExcessHet=3.0103;FS=2.050;HaplotypeScore=35.5928;MLEAC=2;MLEAF=1.00;MQ=57.21;MQ0=0;MQRankSum=0.947;QD=20.94;ReadPosRankSum=0.901;SOR=0.299 GT:AD:DP:GQ:PL 1/1:4,70:74:81:1578,81,0
CP000253.1 768945 . C A 847.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:60:876,60,0
CP000253.1 769140 . C T 1494.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1523,105,0
CP000253.1 769215 . G A 1242.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,56:56:87:1271,87,0
CP000253.1 769260 . G C 768.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:797,54,0
CP000253.1 769266 . C T 669.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.692;DP=34;Dels=0.00;ExcessHet=3.0103;FS=3.144;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.70;ReadPosRankSum=1.393;SOR=0.320 GT:AD:DP:GQ:PL 1/1:2,32:34:25:698,25,0
CP000253.1 769443 . G A 698.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:727,51,0
CP000253.1 770381 . G C 2207.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2236,154,0
CP000253.1 770729 . C T 221.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:250,18,0
CP000253.1 770976 . A G 2209.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2238,154,0
CP000253.1 771129 . A G 653.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:682,48,0
CP000253.1 771255 . C T 1999.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,83:84:99:2028,141,0
CP000253.1 771579 . C A 4442.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4492;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,192:192:99:4471,307,0
CP000253.1 771792 . G T 2141.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=1.310 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2170,154,0
CP000253.1 771876 . C T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 771970 . T C 305.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:334,24,0
CP000253.1 771972 . A T 315.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:344,24,0
CP000253.1 771974 . G A 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 771992 . A G 392.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8614;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:18:30:421,30,0
CP000253.1 772062 . C A 683.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1962;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.06;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:712,48,0
CP000253.1 772108 . A T 952.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.16;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:66:981,66,0
CP000253.1 773025 . T A 4956.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.986;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.83;ReadPosRankSum=1.674;SOR=0.558 GT:AD:DP:GQ:PL 1/1:1,207:208:99:4985,346,0
CP000253.1 773052 . A G 4716.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9720;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,198:198:99:4745,328,0
CP000253.1 773065 . T A 4857.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4968;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,199:199:99:4886,340,0
CP000253.1 773252 . A G 683.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.06;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:712,48,0
CP000253.1 773408 . A G 874.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.051;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.02;ReadPosRankSum=-0.731;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,37:38:63:903,63,0
CP000253.1 773456 . T C 833.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:37:60:862,60,0
CP000253.1 773599 . C T 1320.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1349,93,0
CP000253.1 773648 . T C 1679.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1708,117,0
CP000253.1 773675 . T C 1702.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1731,120,0
CP000253.1 773744 . A T 1385.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1414,99,0
CP000253.1 773807 . A G 1791.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1820,129,0
CP000253.1 773823 . G A 2006.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1654;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2035,144,0
CP000253.1 773932 . A G 2990.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7230;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3019,208,0
CP000253.1 775270 . A T 3197.05 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.791;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6678;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.59;ReadPosRankSum=-1.399;SOR=0.300 GT:AD:DP:GQ:PL 1/1:1,129:131:99:3225,229,0
CP000253.1 775387 . C T 2247.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2276,163,0
CP000253.1 775658 . T C 561.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=58.75;MQ0=0;QD=29.57;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:21:45:590,45,0
CP000253.1 775679 . C T 269.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.722;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.58;MQ0=0;MQRankSum=1.548;QD=4.73;ReadPosRankSum=7.382;SOR=0.474 GT:AD:DP:GQ:PL 0/1:42,15:57:99:298,0,1031
CP000253.1 775680 . C G 290.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.341;DP=57;Dels=0.00;ExcessHet=3.0103;FS=1.165;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.58;MQ0=0;MQRankSum=1.548;QD=5.10;ReadPosRankSum=7.382;SOR=0.474 GT:AD:DP:GQ:PL 0/1:42,15:57:99:319,0,1012
CP000253.1 775690 . C T 1235.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.85;MQ0=0;QD=28.09;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1264,90,0
CP000253.1 775715 . G C 1154.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.85;MQ0=0;QD=26.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,43:44:87:1183,87,0
CP000253.1 775718 . A T 1211.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.85;MQ0=0;QD=27.54;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1240,90,0
CP000253.1 775750 . A G 1691.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=57.42;MQ0=0;QD=25.25;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1720,123,0
CP000253.1 775784 . T C 1899.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=58.46;MQ0=0;QD=26.39;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1928,135,0
CP000253.1 775807 . T C 1992.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0750;MLEAC=2;MLEAF=1.00;MQ=58.58;MQ0=0;QD=25.88;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,77:78:99:2021,144,0
CP000253.1 775824 . A T 2174.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6448;MLEAC=2;MLEAF=1.00;MQ=59.42;MQ0=0;QD=26.52;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2203,157,0
CP000253.1 775833 . C T 1977.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7276;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2006,144,0
CP000253.1 775861 . T G 1955.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.949;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5095;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.73;ReadPosRankSum=-1.601;SOR=0.615 GT:AD:DP:GQ:PL 1/1:1,75:77:99:1984,141,0
CP000253.1 775936 . A G 901.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:66:930,66,0
CP000253.1 776760 . T C 3429.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0374;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.66;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3458,250,0
CP000253.1 777463 . A G 6469.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.0936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6498,461,0
CP000253.1 778885 . C T 3704.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3733,262,0
CP000253.1 779718 . A G 5784.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3890;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.083 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5813,412,0
CP000253.1 779730 . C T 5901.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0763;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,226:232:99:5930,418,0
CP000253.1 780026 . A T 6282.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.597;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=50.8315;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.86;ReadPosRankSum=0.214;SOR=0.550 GT:AD:DP:GQ:PL 1/1:1,242:245:99:6311,454,0
CP000253.1 780152 . A G 6407.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.4385;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6436,469,0
CP000253.1 780775 . A G 5802.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,222:226:99:5831,421,0
CP000253.1 780865 . C T 5960.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=43.1792;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,232:237:99:5989,439,0
CP000253.1 780979 . T C 5832.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.3393;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,231:233:99:5861,433,0
CP000253.1 781195 . G A 5008.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,196:197:99:5037,355,0
CP000253.1 781288 . T C 3562.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.799;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7182;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.20;ReadPosRankSum=-1.707;SOR=0.630 GT:AD:DP:GQ:PL 1/1:1,130:134:99:3591,262,0
CP000253.1 781312 . C T 2938.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.464;DP=117;Dels=0.00;ExcessHet=3.0103;FS=3.090;HaplotypeScore=15.0990;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.33;ReadPosRankSum=-0.393;SOR=0.294 GT:AD:DP:GQ:PL 1/1:2,114:117:99:2967,193,0
CP000253.1 781372 . T A 2713.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.911;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6019;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.35;ReadPosRankSum=-0.151;SOR=0.348 GT:AD:DP:GQ:PL 1/1:1,102:103:99:2742,196,0
CP000253.1 781402 . C T 2901.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,108:111:99:2930,211,0
CP000253.1 781669 . A T 3086.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.815;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0467;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.50;ReadPosRankSum=-1.678;SOR=0.619 GT:AD:DP:GQ:PL 1/1:1,125:128:99:3115,217,0
CP000253.1 781675 . G C 2957.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.422;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9124;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.05;ReadPosRankSum=-0.720;SOR=1.015 GT:AD:DP:GQ:PL 1/1:4,119:126:99:2986,214,0
CP000253.1 781826 . A C 1775.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1804,126,0
CP000253.1 781897 . T C 939.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:38:69:968,69,0
CP000253.1 783363 . T C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 783364 . T A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 783366 . C T 49.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0
CP000253.1 783369 . T A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 783371 . T A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 783372 . A C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 783375 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 783378 . A G 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 783380 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 783384 . A C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 783411 . A T 328.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.92;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:357,27,0
CP000253.1 783423 . A G 321.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:15:24:350,24,0
CP000253.1 783431 . A T 317.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6433;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:15:24:346,24,0
CP000253.1 783464 . A G 312.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:341,24,0
CP000253.1 783465 . A T 279.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.99;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:21:308,21,0
CP000253.1 783473 . G A 318.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:347,24,0
CP000253.1 783522 . A T 219.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:248,18,0
CP000253.1 784081 . T C 1364.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7236;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1393,96,0
CP000253.1 784610 . G A 2750.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.956 GT:AD:DP:GQ:PL 1/1:0,109:110:99:2779,196,0
CP000253.1 784616 . T C 2782.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,115:116:99:2811,199,0
CP000253.1 784635 . C T 3105.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2536;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3134,220,0
CP000253.1 784643 . T A 3245.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.496;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7164;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.52;ReadPosRankSum=-0.677;SOR=0.424 GT:AD:DP:GQ:PL 1/1:2,136:140:99:3274,229,0
CP000253.1 784667 . T A 3298.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3327,229,0
CP000253.1 784694 . G A 3339.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3368,232,0
CP000253.1 784697 . A G 3289.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.33;ReadPosRankSum=1.708;SOR=0.268 GT:AD:DP:GQ:PL 1/1:1,140:142:99:3318,229,0
CP000253.1 784700 . T A 3409.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3438,238,0
CP000253.1 784706 . A T 3318.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3347,232,0
CP000253.1 784709 . A G 3390.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3419,235,0
CP000253.1 784718 . G A 3666.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3695,253,0
CP000253.1 784730 . C T 3536.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3565,247,0
CP000253.1 784748 . T G 3791.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,162:162:99:3820,262,0
CP000253.1 784922 . T A 2512.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9420;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2541,178,0
CP000253.1 784925 . T A 2507.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9106;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2536,178,0
CP000253.1 784970 . A G 2106.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.803;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1514;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.79;ReadPosRankSum=-0.347;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,84:85:99:2135,150,0
CP000253.1 784979 . C T 2024.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2053,144,0
CP000253.1 785004 . G A 1960.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,84:85:99:1989,138,0
CP000253.1 785093 . G T 2056.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2085,147,0
CP000253.1 785105 . A G 1757.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.25;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:80:99:1786,123,0
CP000253.1 785108 . G A 1854.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1883,132,0
CP000253.1 785111 . G T 1832.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1861,129,0
CP000253.1 785114 . T C 1751.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.884;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.90;ReadPosRankSum=1.603;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,79:80:99:1780,123,0
CP000253.1 785117 . T A 1890.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.119;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4648;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.34;ReadPosRankSum=1.733;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,80:81:99:1919,132,0
CP000253.1 785134 . C T 1999.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2623;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2028,141,0
CP000253.1 785205 . A G 1256.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1285,90,0
CP000253.1 785207 . T C 1297.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:93:1326,93,0
CP000253.1 785219 . C T 1143.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:49:81:1172,81,0
CP000253.1 785223 . G C 1157.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,46:47:84:1186,84,0
CP000253.1 785228 . T A 1107.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1136,81,0
CP000253.1 785255 . G A 470.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:499,36,0
CP000253.1 785366 . T A 2183.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=1.090 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2212,160,0
CP000253.1 785441 . C T 4900.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.914;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3412;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.02;ReadPosRankSum=0.391;SOR=0.531 GT:AD:DP:GQ:PL 1/1:1,203:205:99:4929,340,0
CP000253.1 785453 . G A 5338.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,225:225:99:5367,373,0
CP000253.1 785477 . T C 5694.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,238:240:99:5723,400,0
CP000253.1 785480 . G A 5776.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,240:240:99:5805,400,0
CP000253.1 785483 . G A 5882.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,243:243:99:5911,409,0
CP000253.1 785504 . C T 6053.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5648;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6082,424,0
CP000253.1 785528 . C T 5950.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,246:250:99:5979,424,0
CP000253.1 785545 . A C 5982.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6671;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.32;ReadPosRankSum=0.465;SOR=0.477 GT:AD:DP:GQ:PL 1/1:1,245:247:99:6011,424,0
CP000253.1 785546 . T A 6162.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.858 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6191,430,0
CP000253.1 785548 . G A 6143.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6172,430,0
CP000253.1 785555 . A T 6186.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6215,433,0
CP000253.1 785570 . A G 6184.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.927;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.74;ReadPosRankSum=-0.319;SOR=0.812 GT:AD:DP:GQ:PL 1/1:2,248:250:99:6213,398,0
CP000253.1 785651 . G A 5854.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,230:230:99:5883,412,0
CP000253.1 785654 . G A 5795.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,229:229:99:5824,409,0
CP000253.1 785672 . G A 5905.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.935;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4147;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.13;ReadPosRankSum=-0.760;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,234:235:99:5934,415,0
CP000253.1 785687 . T A 5934.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,238:238:99:5963,418,0
CP000253.1 785699 . C A 5610.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7589;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,220:220:99:5639,394,0
CP000253.1 785708 . A T 5885.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3869;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,234:237:99:5914,418,0
CP000253.1 785732 . C T 5302.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2725;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,220:221:99:5331,373,0
CP000253.1 785765 . T A 5585.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,217:217:99:5614,394,0
CP000253.1 785807 . T C 5321.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5962;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,209:209:99:5350,379,0
CP000253.1 785810 . C A 5039.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,208:209:99:5068,361,0
CP000253.1 785822 . G A 5288.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.031;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9849;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.67;ReadPosRankSum=1.531;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,205:206:99:5317,373,0
CP000253.1 785864 . T A 4919.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.793;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.49;ReadPosRankSum=-0.440;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,192:195:99:4948,352,0
CP000253.1 785876 . C T 5132.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1095;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,199:199:99:5161,364,0
CP000253.1 785882 . C A 5054.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,197:198:99:5083,361,0
CP000253.1 785888 . T G 5025.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.454;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.64;ReadPosRankSum=-1.705;SOR=0.123 GT:AD:DP:GQ:PL 1/1:2,194:197:99:5054,364,0
CP000253.1 785903 . A T 4838.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1654;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.935 GT:AD:DP:GQ:PL 1/1:0,191:191:99:4867,343,0
CP000253.1 785915 . G A 4829.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7334;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,191:193:99:4858,346,0
CP000253.1 786203 . A G 6056.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6085,430,0
CP000253.1 786206 . A G 6047.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9121;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,240:241:99:6076,427,0
CP000253.1 786230 . C T 5932.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7931;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,235:236:99:5961,421,0
CP000253.1 786242 . A T 5322.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.923;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.22;ReadPosRankSum=1.699;SOR=0.266 GT:AD:DP:GQ:PL 1/1:1,202:203:99:5351,376,0
CP000253.1 786247 . G A 5168.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,199:202:99:5197,367,0
CP000253.1 786251 . T A 5059.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7566;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,198:198:99:5088,358,0
CP000253.1 786254 . A T 5209.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,197:199:99:5238,370,0
CP000253.1 786257 . G A 5361.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5390,382,0
CP000253.1 786266 . G A 5354.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,209:211:99:5383,385,0
CP000253.1 786269 . A T 5578.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6114;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5607,397,0
CP000253.1 786308 . A G 5151.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5416;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5180,367,0
CP000253.1 786314 . A G 5061.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,202:206:99:5090,361,0
CP000253.1 786335 . T C 5047.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,205:205:99:5076,361,0
CP000253.1 786353 . G A 5145.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,201:203:99:5174,364,0
CP000253.1 786360 . A C 4967.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0396;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,197:199:99:4996,355,0
CP000253.1 786377 . T G 4683.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4712,334,0
CP000253.1 786378 . C T 4756.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7860;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4785,337,0
CP000253.1 786527 . T A 5960.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.517;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.5773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.94;ReadPosRankSum=1.747;SOR=0.207 GT:AD:DP:GQ:PL 1/1:2,247:249:99:5989,424,0
CP000253.1 786543 . C T 5921.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.1165;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,236:241:99:5950,418,0
CP000253.1 786646 . A T 5573.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9741;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5602,403,0
CP000253.1 786756 . G A 5299.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,204:207:99:5328,379,0
CP000253.1 786854 . T C 5370.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.770;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2974;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=0.653;SOR=0.313 GT:AD:DP:GQ:PL 1/1:1,214:216:99:5399,388,0
CP000253.1 786947 . G A 5517.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1160;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.31;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5546,388,0
CP000253.1 787481 . A T 3729.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3197;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,152:153:99:3758,262,0
CP000253.1 787484 . T A 3681.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3197;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3710,259,0
CP000253.1 787496 . G T 3460.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3489,244,0
CP000253.1 787505 . T C 3249.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3278,229,0
CP000253.1 787508 . A C 3021.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3050,214,0
CP000253.1 787517 . C A 3107.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5691;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3136,220,0
CP000253.1 787523 . G A 3030.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3059,214,0
CP000253.1 787524 . C A 3039.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3068,214,0
CP000253.1 787532 . G A 2818.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2847,199,0
CP000253.1 787535 . A G 2773.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.77;ReadPosRankSum=1.717;SOR=0.314 GT:AD:DP:GQ:PL 1/1:1,111:112:99:2802,196,0
CP000253.1 787544 . C T 2864.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2507;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,113:116:99:2893,205,0
CP000253.1 787556 . T C 2734.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5145;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,114:117:99:2763,193,0
CP000253.1 787562 . A T 2896.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.860;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8101;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.859;SOR=0.319 GT:AD:DP:GQ:PL 1/1:1,116:117:99:2925,205,0
CP000253.1 787574 . A G 2788.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9445;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2817,199,0
CP000253.1 787787 . G A 2621.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2650,187,0
CP000253.1 787832 . T C 3532.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3561,250,0
CP000253.1 787838 . G A 3736.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,150:151:99:3765,262,0
CP000253.1 787844 . C T 3732.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3761,262,0
CP000253.1 787859 . A G 3814.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3843,268,0
CP000253.1 787895 . T C 3958.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,159:160:99:3987,277,0
CP000253.1 788006 . C T 5048.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2897;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=23.93;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,211:212:99:5077,352,0
CP000253.1 788009 . G A 5111.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3433;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=24.11;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,212:212:99:5140,358,0
CP000253.1 788019 . A T 5226.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.790;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3702;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=14.833;QD=23.87;ReadPosRankSum=-1.195;SOR=0.282 GT:AD:DP:GQ:PL 1/1:1,218:219:99:5255,367,0
CP000253.1 788027 . G A 5102.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3575;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,212:212:99:5131,355,0
CP000253.1 788033 . T A 4955.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7314;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,205:207:99:4984,346,0
CP000253.1 788039 . A T 4765.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.532;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.48;ReadPosRankSum=0.363;SOR=0.786 GT:AD:DP:GQ:PL 1/1:2,201:203:99:4794,334,0
CP000253.1 788042 . T A 4799.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.797;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.88;ReadPosRankSum=-1.043;SOR=0.352 GT:AD:DP:GQ:PL 1/1:1,200:203:99:4828,340,0
CP000253.1 788045 . G A 4828.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.819;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0184;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=-0.535;SOR=0.366 GT:AD:DP:GQ:PL 1/1:1,203:205:99:4857,340,0
CP000253.1 788357 . T G 1818.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.731;DP=71;Dels=0.00;ExcessHet=3.0103;FS=3.337;HaplotypeScore=5.2386;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.98;ReadPosRankSum=0.149;SOR=0.551 GT:AD:DP:GQ:PL 1/1:1,69:71:99:1847,132,0
CP000253.1 788539 . A G 3358.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,145:148:99:3387,238,0
CP000253.1 788585 . A T 3390.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.699;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.91;ReadPosRankSum=-0.152;SOR=0.288 GT:AD:DP:GQ:PL 1/1:1,147:148:99:3419,241,0
CP000253.1 788626 . T C 3109.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2750;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,132:134:99:3138,220,0
CP000253.1 788672 . G A 3051.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.796;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.5272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.03;ReadPosRankSum=1.446;SOR=0.428 GT:AD:DP:GQ:PL 1/1:1,126:127:99:3080,220,0
CP000253.1 788682 . T A 2788.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.12;ReadPosRankSum=1.484;SOR=0.346 GT:AD:DP:GQ:PL 1/1:1,110:115:99:2817,202,0
CP000253.1 788686 . G A 2760.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.458;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=-0.943;SOR=0.313 GT:AD:DP:GQ:PL 1/1:1,113:114:99:2789,201,0
CP000253.1 788699 . T A 2813.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.651;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.68;ReadPosRankSum=-1.460;SOR=0.663 GT:AD:DP:GQ:PL 1/1:1,113:114:99:2842,205,0
CP000253.1 789280 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 789416 . T G 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 790118 . C T 161.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:190,15,0
CP000253.1 790223 . C T 634.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:45:663,45,0
CP000253.1 790847 . T C 177.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:206,15,0
CP000253.1 791249 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 791268 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 791340 . A G 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 791519 . G A 120.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.01;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:148,12,0
CP000253.1 791541 . C T 185.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:214,15,0
CP000253.1 791544 . T C 177.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:206,15,0
CP000253.1 791680 . G A 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 791799 . G T 444.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:33:473,33,0
CP000253.1 791802 . G T 482.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:511,36,0
CP000253.1 791830 . C A 348.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:377,27,0
CP000253.1 791910 . C T 446.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:475,33,0
CP000253.1 791917 . C T 460.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:489,36,0
CP000253.1 792234 . G T 2686.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2715,187,0
CP000253.1 792335 . C A 3359.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3198;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3388,232,0
CP000253.1 792343 . T A 3268.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.898;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.18;ReadPosRankSum=1.180;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,140:142:99:3297,229,0
CP000253.1 792363 . T C 3372.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3401,232,0
CP000253.1 792410 . A G 3028.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.579;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.95;ReadPosRankSum=-1.072;SOR=0.118 GT:AD:DP:GQ:PL 1/1:2,130:133:99:3057,211,0
CP000253.1 792411 . G A 2998.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3027,208,0
CP000253.1 792727 . C A 577.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:606,42,0
CP000253.1 792915 . G A 256.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.10;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:21:285,21,0
CP000253.1 793563 . G A 3594.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3623,256,0
CP000253.1 793593 . A G 3015.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7550;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3044,217,0
CP000253.1 793607 . A C 2973.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.78;ReadPosRankSum=0.534;SOR=0.358 GT:AD:DP:GQ:PL 1/1:1,119:121:99:3002,211,0
CP000253.1 793613 . G A 2977.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3006,211,0
CP000253.1 793665 . T C 2535.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3610;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2564,184,0
CP000253.1 793696 . G A 2562.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2591,184,0
CP000253.1 793697 . A G 2559.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2588,181,0
CP000253.1 793704 . C A 2562.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2591,184,0
CP000253.1 793709 . G A 2590.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2619,184,0
CP000253.1 793710 . G C 2605.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2634,187,0
CP000253.1 793954 . A T 564.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:593,42,0
CP000253.1 793955 . A G 570.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:599,42,0
CP000253.1 793959 . C A 552.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:581,42,0
CP000253.1 793966 . T A 563.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:592,42,0
CP000253.1 793967 . G A 522.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:551,39,0
CP000253.1 793974 . A C 571.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:600,42,0
CP000253.1 793978 . A T 569.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:598,42,0
CP000253.1 793980 . C A 570.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:599,42,0
CP000253.1 793982 . T A 572.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:601,42,0
CP000253.1 793984 . G T 556.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:585,42,0
CP000253.1 793987 . C T 573.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:602,42,0
CP000253.1 793993 . C A 1280.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,54:54:90:1309,90,0
CP000253.1 794019 . A C 1364.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1393,96,0
CP000253.1 794042 . G A 1238.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1267,87,0
CP000253.1 794044 . T A 1235.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1264,87,0
CP000253.1 794056 . T A 701.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:51:730,51,0
CP000253.1 794058 . G C 654.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:25:48:683,48,0
CP000253.1 794059 . T C 658.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:687,48,0
CP000253.1 794061 . C A 658.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:687,48,0
CP000253.1 794062 . A T 658.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:687,48,0
CP000253.1 794065 . A T 637.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:666,48,0
CP000253.1 794068 . A T 655.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:684,48,0
CP000253.1 794070 . A G 651.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:680,48,0
CP000253.1 794071 . C T 658.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:687,48,0
CP000253.1 794074 . A G 658.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:687,48,0
CP000253.1 794084 . G A 657.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:686,48,0
CP000253.1 794086 . A C 657.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:686,48,0
CP000253.1 794089 . T C 650.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:679,48,0
CP000253.1 794095 . A G 658.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:687,48,0
CP000253.1 794104 . T A 655.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:684,48,0
CP000253.1 794105 . A C 650.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:679,48,0
CP000253.1 794107 . G A 647.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:676,48,0
CP000253.1 794110 . T C 657.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:686,48,0
CP000253.1 794111 . T C 653.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:682,48,0
CP000253.1 794116 . C T 644.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:48:673,48,0
CP000253.1 794122 . T A 1239.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:87:1268,87,0
CP000253.1 794134 . A G 1338.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1367,93,0
CP000253.1 794140 . C T 1378.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:96:1407,96,0
CP000253.1 794170 . T C 1463.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1492,102,0
CP000253.1 794173 . G A 1474.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1503,102,0
CP000253.1 794194 . T C 1337.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:93:1366,93,0
CP000253.1 794428 . T C 1337.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.85;MQ0=0;QD=25.24;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:96:1366,96,0
CP000253.1 794449 . A T 1382.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3639;MLEAC=2;MLEAF=1.00;MQ=58.21;MQ0=0;QD=26.09;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1411,99,0
CP000253.1 794464 . T C 1291.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.44;MQ0=0;QD=26.36;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:49:93:1320,93,0
CP000253.1 794476 . G T 730.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.23;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:759,54,0
CP000253.1 794477 . A G 713.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.55;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:742,54,0
CP000253.1 794478 . A C 729.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.19;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:758,54,0
CP000253.1 794482 . C T 718.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.75;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:747,54,0
CP000253.1 794484 . A C 725.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.03;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:754,54,0
CP000253.1 794497 . T A 689.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.59;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:51:718,51,0
CP000253.1 794498 . T C 720.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.83;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:749,54,0
CP000253.1 794506 . A G 720.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.83;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:749,54,0
CP000253.1 794509 . T A 720.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.83;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:749,54,0
CP000253.1 794512 . A T 718.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.75;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:747,54,0
CP000253.1 794518 . G T 698.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.95;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:727,54,0
CP000253.1 794522 . A G 720.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.83;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:749,54,0
CP000253.1 794524 . C T 716.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.67;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:745,54,0
CP000253.1 794527 . G T 725.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.03;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:754,54,0
CP000253.1 794531 . A T 720.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.83;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:749,54,0
CP000253.1 794533 . A T 714.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.59;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:743,54,0
CP000253.1 794536 . T A 727.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.11;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:756,54,0
CP000253.1 794540 . C A 705.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.23;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:54:734,54,0
CP000253.1 794542 . C A 807.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.85;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,28:28:60:836,60,0
CP000253.1 794728 . G T 2536.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.716;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0074;MLEAC=2;MLEAF=1.00;MQ=59.53;MQ0=0;MQRankSum=-0.120;QD=26.70;ReadPosRankSum=1.715;SOR=0.793 GT:AD:DP:GQ:PL 1/1:1,94:97:99:2565,184,0
CP000253.1 794731 . T C 2480.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.8458;MLEAC=2;MLEAF=1.00;MQ=59.53;MQ0=0;QD=26.67;SOR=1.119 GT:AD:DP:GQ:PL 1/1:0,93:97:99:2509,187,0
CP000253.1 794767 . G A 320.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.257;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.946;HaplotypeScore=45.5393;MLEAC=1;MLEAF=0.500;MQ=48.45;MQ0=10;MQRankSum=-8.971;QD=2.15;ReadPosRankSum=-8.224;SOR=0.403 GT:AD:DP:GQ:PL 0/1:100,49:153:99:349,0,2206
CP000253.1 794770 . T C 150.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.415;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=51.8762;MLEAC=1;MLEAF=0.500;MQ=48.36;MQ0=10;MQRankSum=-2.981;QD=0.99;ReadPosRankSum=-4.309;SOR=0.525 GT:AD:DP:GQ:PL 0/1:134,18:152:99:179,0,2478
CP000253.1 794785 . A G 207.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.015;DP=154;Dels=0.00;ExcessHet=3.0103;FS=1.037;HaplotypeScore=29.9771;MLEAC=1;MLEAF=0.500;MQ=48.09;MQ0=11;MQRankSum=-3.373;QD=1.38;ReadPosRankSum=-4.450;SOR=0.457 GT:AD:DP:GQ:PL 0/1:128,23:154:99:236,0,2458
CP000253.1 794788 . T C 178.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.584;DP=150;Dels=0.00;ExcessHet=3.0103;FS=1.059;HaplotypeScore=42.2680;MLEAC=1;MLEAF=0.500;MQ=47.73;MQ0=11;MQRankSum=-3.383;QD=1.21;ReadPosRankSum=-4.913;SOR=0.387 GT:AD:DP:GQ:PL 0/1:126,22:150:99:207,0,2283
CP000253.1 794797 . C T 278.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.007;DP=149;Dels=0.00;ExcessHet=3.0103;FS=4.696;HaplotypeScore=58.0520;MLEAC=1;MLEAF=0.500;MQ=47.56;MQ0=11;MQRankSum=-6.755;QD=1.91;ReadPosRankSum=-5.059;SOR=0.671 GT:AD:DP:GQ:PL 0/1:94,52:149:99:307,0,2056
CP000253.1 794806 . T C 337.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=145;Dels=0.00;ExcessHet=3.0103;FS=1.945;HaplotypeScore=61.4192;MLEAC=1;MLEAF=0.500;MQ=47.12;MQ0=11;MQRankSum=-3.934;QD=2.36;ReadPosRankSum=-4.290;SOR=0.344 GT:AD:DP:GQ:PL 0/1:110,33:145:99:366,0,2111
CP000253.1 794821 . A G 292.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.291;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.9019;MLEAC=1;MLEAF=0.500;MQ=46.25;MQ0=11;MQRankSum=-3.900;QD=2.20;ReadPosRankSum=-3.268;SOR=0.418 GT:AD:DP:GQ:PL 0/1:103,30:137:99:321,0,1938
CP000253.1 794824 . C T 2507.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.479;DP=135;Dels=0.00;ExcessHet=3.0103;FS=6.755;HaplotypeScore=33.3916;MLEAC=2;MLEAF=1.00;MQ=46.02;MQ0=11;MQRankSum=5.365;QD=18.58;ReadPosRankSum=1.860;SOR=1.108 GT:AD:DP:GQ:PL 1/1:28,107:135:99:2536,118,0
CP000253.1 794830 . C A 360.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.695;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.0719;MLEAC=1;MLEAF=0.500;MQ=31.01;MQ0=11;MQRankSum=-1.385;QD=5.15;ReadPosRankSum=1.622;SOR=0.587 GT:AD:DP:GQ:PL 0/1:26,44:70:99:389,0,341
CP000253.1 794833 . C T 333.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.559;DP=70;Dels=0.00;ExcessHet=3.0103;FS=3.192;HaplotypeScore=56.0535;MLEAC=1;MLEAF=0.500;MQ=31.01;MQ0=11;MQRankSum=-2.182;QD=4.84;ReadPosRankSum=1.604;SOR=0.407 GT:AD:DP:GQ:PL 0/1:31,38:70:99:362,0,401
CP000253.1 794839 . G A 54.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.095;DP=68;Dels=0.00;ExcessHet=3.0103;FS=4.374;HaplotypeScore=41.3683;MLEAC=1;MLEAF=0.500;MQ=30.61;MQ0=10;MQRankSum=-0.057;QD=0.86;ReadPosRankSum=0.437;SOR=2.549 GT:AD:DP:GQ:PL 0/1:45,19:68:83:83,0,493
CP000253.1 794842 . C T 57.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.350;DP=70;Dels=0.00;ExcessHet=3.0103;FS=1.455;HaplotypeScore=51.4266;MLEAC=1;MLEAF=0.500;MQ=30.54;MQ0=11;MQRankSum=1.876;QD=0.83;ReadPosRankSum=-0.378;SOR=1.027 GT:AD:DP:GQ:PL 0/1:61,9:70:86:86,0,811
CP000253.1 794848 . C A 565.31 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.097;DP=42;Dels=0.05;ExcessHet=3.0103;FS=0.000;HaplotypeScore=42.9001;MLEAC=1;MLEAF=0.500;MQ=34.33;MQ0=7;MQRankSum=-0.495;QD=14.50;ReadPosRankSum=1.409;SOR=0.731 GT:AD:DP:GQ:PL 0/1:6,33:40:1:591,0,1
CP000253.1 794866 . G A 651.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.124;DP=39;Dels=0.00;ExcessHet=3.0103;FS=3.163;HaplotypeScore=62.6162;MLEAC=2;MLEAF=1.00;MQ=34.08;MQ0=7;MQRankSum=-0.060;QD=18.62;ReadPosRankSum=-0.352;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,34:39:31:680,31,0
CP000253.1 794872 . A C 354.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;DP=39;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.8048;MLEAC=1;MLEAF=0.500;MQ=34.08;MQ0=7;MQRankSum=1.200;QD=9.34;ReadPosRankSum=-0.407;SOR=0.527 GT:AD:DP:GQ:PL 0/1:13,25:38:99:383,0,115
CP000253.1 794884 . T C 479.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.302;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.1547;MLEAC=1;MLEAF=0.500;MQ=33.82;MQ0=7;MQRankSum=1.024;QD=14.54;ReadPosRankSum=1.370;SOR=0.172 GT:AD:DP:GQ:PL 0/1:6,27:41:20:442,0,20
CP000253.1 794893 . C T 369.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.720;DP=40;Dels=0.00;ExcessHet=3.0103;FS=2.350;HaplotypeScore=26.4694;MLEAC=1;MLEAF=0.500;MQ=34.23;MQ0=7;MQRankSum=0.339;QD=10.27;ReadPosRankSum=-0.114;SOR=0.929 GT:AD:DP:GQ:PL 0/1:11,25:40:46:398,0,46
CP000253.1 794896 . T C 439.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.445;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6518;MLEAC=1;MLEAF=0.500;MQ=34.40;MQ0=7;MQRankSum=2.566;QD=11.57;ReadPosRankSum=-1.211;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,30:39:25:468,0,25
CP000253.1 794899 . C T 76.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.440;DP=38;Dels=0.00;ExcessHet=3.0103;FS=1.664;HaplotypeScore=21.5716;MLEAC=1;MLEAF=0.500;MQ=34.68;MQ0=7;MQRankSum=-0.024;QD=2.07;ReadPosRankSum=0.945;SOR=1.087 GT:AD:DP:GQ:PL 0/1:26,11:38:99:105,0,443
CP000253.1 794908 . C A 516.22 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.437;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5185;MLEAC=1;MLEAF=0.500;MQ=34.91;MQ0=7;MQRankSum=2.428;QD=13.95;ReadPosRankSum=-0.892;SOR=0.544 GT:AD:DP:GQ:PL 0/1:6,31:37:4:543,0,4
CP000253.1 794914 . T C 287.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.917;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.6509;MLEAC=1;MLEAF=0.500;MQ=35.40;MQ0=7;MQRankSum=0.986;QD=8.46;ReadPosRankSum=-0.601;SOR=0.412 GT:AD:DP:GQ:PL 0/1:12,22:35:99:316,0,146
CP000253.1 794917 . C T 335.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.049;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.5025;MLEAC=1;MLEAF=0.500;MQ=37.84;MQ0=7;MQRankSum=0.263;QD=8.39;ReadPosRankSum=2.793;SOR=0.812 GT:AD:DP:GQ:PL 0/1:14,26:40:88:364,0,88
CP000253.1 794920 . A T 89.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.905;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=42.5466;MLEAC=1;MLEAF=0.500;MQ=37.55;MQ0=7;MQRankSum=-0.036;QD=2.24;ReadPosRankSum=2.432;SOR=1.128 GT:AD:DP:GQ:PL 0/1:24,16:43:99:118,0,264
CP000253.1 794923 . T C 103.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.891;DP=45;Dels=0.00;ExcessHet=3.0103;FS=1.344;HaplotypeScore=44.2800;MLEAC=1;MLEAF=0.500;MQ=37.86;MQ0=7;MQRankSum=0.084;QD=2.47;ReadPosRankSum=3.355;SOR=1.112 GT:AD:DP:GQ:PL 0/1:23,19:45:99:132,0,280
CP000253.1 794929 . T C 457.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.428;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=41.3370;MLEAC=1;MLEAF=0.500;MQ=39.49;MQ0=6;MQRankSum=1.860;QD=10.65;ReadPosRankSum=-1.108;SOR=0.652 GT:AD:DP:GQ:PL 0/1:11,32:47:70:486,0,70
CP000253.1 794938 . T C 44.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.606;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7242;MLEAC=1;MLEAF=0.500;MQ=40.26;MQ0=6;MQRankSum=-0.988;QD=1.12;ReadPosRankSum=1.421;SOR=0.807 GT:AD:DP:GQ:PL 0/1:31,9:47:73:73,0,412
CP000253.1 794953 . C T 78.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.049;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=53.9810;MLEAC=1;MLEAF=0.500;MQ=42.39;MQ0=4;MQRankSum=-0.324;QD=1.83;ReadPosRankSum=-1.594;SOR=0.858 GT:AD:DP:GQ:PL 0/1:31,12:43:99:107,0,501
CP000253.1 794974 . A C 200.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.064;DP=42;Dels=0.00;ExcessHet=3.0103;FS=3.053;HaplotypeScore=65.3668;MLEAC=1;MLEAF=0.500;MQ=42.52;MQ0=4;MQRankSum=1.810;QD=4.90;ReadPosRankSum=-0.585;SOR=1.061 GT:AD:DP:GQ:PL 0/1:27,14:42:99:229,0,459
CP000253.1 794977 . T C 274.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.509;DP=43;Dels=0.00;ExcessHet=3.0103;FS=4.773;HaplotypeScore=58.8121;MLEAC=1;MLEAF=0.500;MQ=42.22;MQ0=4;MQRankSum=1.033;QD=6.39;ReadPosRankSum=-1.758;SOR=1.127 GT:AD:DP:GQ:PL 0/1:24,19:43:99:303,0,400
CP000253.1 794980 . A C 117.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.865;DP=44;Dels=0.00;ExcessHet=3.0103;FS=4.084;HaplotypeScore=38.5431;MLEAC=1;MLEAF=0.500;MQ=41.74;MQ0=5;MQRankSum=-1.159;QD=2.74;ReadPosRankSum=0.354;SOR=1.469 GT:AD:DP:GQ:PL 0/1:29,14:44:99:146,0,406
CP000253.1 794983 . T C 189.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.043;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.8720;MLEAC=1;MLEAF=0.500;MQ=41.77;MQ0=4;MQRankSum=1.673;QD=4.52;ReadPosRankSum=0.362;SOR=0.928 GT:AD:DP:GQ:PL 0/1:29,13:42:99:218,0,433
CP000253.1 794986 . C T 196.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.828;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=43.4515;MLEAC=1;MLEAF=0.500;MQ=41.77;MQ0=4;MQRankSum=2.282;QD=4.68;ReadPosRankSum=-0.081;SOR=0.803 GT:AD:DP:GQ:PL 0/1:30,12:42:99:225,0,510
CP000253.1 794989 . T C 156.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.423;DP=42;Dels=0.00;ExcessHet=3.0103;FS=3.722;HaplotypeScore=48.1641;MLEAC=1;MLEAF=0.500;MQ=41.77;MQ0=4;MQRankSum=1.430;QD=3.73;ReadPosRankSum=-0.242;SOR=1.199 GT:AD:DP:GQ:PL 0/1:27,15:42:99:185,0,436
CP000253.1 794992 . A C 19.81 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.042;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=41.5609;MLEAC=1;MLEAF=0.500;MQ=41.77;MQ0=4;MQRankSum=1.496;QD=0.48;ReadPosRankSum=0.245;SOR=0.895 GT:AD:DP:GQ:PL 0/1:34,7:42:48:48,0,580
CP000253.1 794995 . T C 141.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.311;DP=42;Dels=0.00;ExcessHet=3.0103;FS=3.053;HaplotypeScore=41.6997;MLEAC=1;MLEAF=0.500;MQ=41.77;MQ0=4;MQRankSum=-0.093;QD=3.38;ReadPosRankSum=2.157;SOR=1.061 GT:AD:DP:GQ:PL 0/1:29,13:42:99:170,0,525
CP000253.1 794998 . C A 309.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.603;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=39.1936;MLEAC=1;MLEAF=0.500;MQ=41.03;MQ0=4;MQRankSum=-0.415;QD=7.94;ReadPosRankSum=2.527;SOR=0.593 GT:AD:DP:GQ:PL 0/1:21,18:40:99:338,0,362
CP000253.1 795001 . C T 125.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.471;DP=40;Dels=0.00;ExcessHet=3.0103;FS=1.515;HaplotypeScore=37.9407;MLEAC=1;MLEAF=0.500;MQ=41.03;MQ0=4;MQRankSum=1.693;QD=3.22;ReadPosRankSum=0.275;SOR=1.163 GT:AD:DP:GQ:PL 0/1:27,12:40:99:154,0,479
CP000253.1 795004 . T C 218.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;DP=40;Dels=0.00;ExcessHet=3.0103;FS=3.558;HaplotypeScore=36.8704;MLEAC=1;MLEAF=0.500;MQ=41.04;MQ0=3;MQRankSum=1.214;QD=5.47;ReadPosRankSum=-0.666;SOR=1.354 GT:AD:DP:GQ:PL 0/1:24,16:40:99:247,0,353
CP000253.1 795007 . T C 122.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.664;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.9423;MLEAC=1;MLEAF=0.500;MQ=41.04;MQ0=3;MQRankSum=-0.850;QD=3.07;ReadPosRankSum=0.376;SOR=0.616 GT:AD:DP:GQ:PL 0/1:24,16:40:99:151,0,444
CP000253.1 795010 . C A 291.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.076;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.1011;MLEAC=1;MLEAF=0.500;MQ=41.76;MQ0=3;MQRankSum=-1.056;QD=8.10;ReadPosRankSum=1.226;SOR=0.582 GT:AD:DP:GQ:PL 0/1:16,20:40:99:320,0,237
CP000253.1 795013 . C T 115.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.318;DP=39;Dels=0.00;ExcessHet=3.0103;FS=4.060;HaplotypeScore=32.2400;MLEAC=1;MLEAF=0.500;MQ=41.80;MQ0=3;MQRankSum=0.859;QD=3.13;ReadPosRankSum=1.641;SOR=1.472 GT:AD:DP:GQ:PL 0/1:24,13:39:99:144,0,434
CP000253.1 795016 . A C 31.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.399;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=58.1950;MLEAC=1;MLEAF=0.500;MQ=40.77;MQ0=3;MQRankSum=0.951;QD=0.77;ReadPosRankSum=1.735;SOR=0.841 GT:AD:DP:GQ:PL 0/1:32,9:41:60:60,0,512
CP000253.1 795019 . C T 225.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.225;DP=41;Dels=0.02;ExcessHet=3.0103;FS=7.025;HaplotypeScore=32.3133;MLEAC=1;MLEAF=0.500;MQ=40.77;MQ0=3;MQRankSum=0.355;QD=5.64;ReadPosRankSum=2.240;SOR=1.455 GT:AD:DP:GQ:PL 0/1:24,16:40:99:254,0,270
CP000253.1 795028 . T C 347.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.402;DP=45;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=113.3595;MLEAC=1;MLEAF=0.500;MQ=42.30;MQ0=3;MQRankSum=1.101;QD=12.42;ReadPosRankSum=-0.522;SOR=0.397 GT:AD:DP:GQ:PL 0/1:12,16:44:99:376,0,167
CP000253.1 795031 . C T 14.91 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.595;DP=48;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=111.5960;MLEAC=1;MLEAF=0.500;MQ=41.57;MQ0=4;MQRankSum=-2.365;QD=0.32;ReadPosRankSum=1.703;SOR=0.616 GT:AD:DP:GQ:PL 0/1:33,14:47:43:43,0,597
CP000253.1 795040 . T A 48.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.519;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.1796;MLEAC=1;MLEAF=0.500;MQ=40.78;MQ0=6;MQRankSum=1.019;QD=1.32;ReadPosRankSum=0.594;SOR=1.059 GT:AD:DP:GQ:PL 0/1:30,7:51:77:77,0,634
CP000253.1 795043 . T C 493.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.897;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=110.2033;MLEAC=1;MLEAF=0.500;MQ=40.79;MQ0=6;MQRankSum=1.377;QD=10.08;ReadPosRankSum=0.391;SOR=0.678 GT:AD:DP:GQ:PL 0/1:22,27:51:99:522,0,139
CP000253.1 795046 . C A 650.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.565;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.9520;MLEAC=1;MLEAF=0.500;MQ=40.79;MQ0=6;MQRankSum=-0.549;QD=12.76;ReadPosRankSum=0.889;SOR=0.534 GT:AD:DP:GQ:PL 0/1:12,39:51:97:679,0,97
CP000253.1 795055 . C T 624.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.641;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.7659;MLEAC=1;MLEAF=0.500;MQ=40.50;MQ0=6;MQRankSum=2.687;QD=12.75;ReadPosRankSum=-0.652;SOR=0.711 GT:AD:DP:GQ:PL 0/1:15,34:52:57:653,0,57
CP000253.1 795070 . C A 129.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.480;DP=60;Dels=0.00;ExcessHet=3.0103;FS=1.209;HaplotypeScore=32.8335;MLEAC=1;MLEAF=0.500;MQ=41.06;MQ0=7;MQRankSum=-1.251;QD=2.16;ReadPosRankSum=0.667;SOR=0.940 GT:AD:DP:GQ:PL 0/1:41,19:60:99:158,0,605
CP000253.1 795082 . C A 210.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.499;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.4378;MLEAC=1;MLEAF=0.500;MQ=41.52;MQ0=7;MQRankSum=-2.088;QD=3.24;ReadPosRankSum=-0.715;SOR=0.693 GT:AD:DP:GQ:PL 0/1:42,23:65:99:239,0,603
CP000253.1 795085 . C T 47.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.008;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=46.2085;MLEAC=1;MLEAF=0.500;MQ=41.76;MQ0=7;MQRankSum=-0.654;QD=0.70;ReadPosRankSum=-3.747;SOR=0.622 GT:AD:DP:GQ:PL 0/1:56,12:70:76:76,0,1051
CP000253.1 795091 . T C 16.86 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.290;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=55.6475;MLEAC=1;MLEAF=0.500;MQ=40.44;MQ0=8;MQRankSum=-2.324;QD=0.23;ReadPosRankSum=1.841;SOR=0.660 GT:AD:DP:GQ:PL 0/1:61,13:77:45:45,0,975
CP000253.1 795100 . C A 38.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.355;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=48.4055;MLEAC=1;MLEAF=0.500;MQ=39.93;MQ0=9;MQRankSum=-2.126;QD=0.53;ReadPosRankSum=2.247;SOR=0.622 GT:AD:DP:GQ:PL 0/1:56,17:79:67:67,0,1016
CP000253.1 795109 . T C 41.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.425;DP=85;Dels=0.00;ExcessHet=3.0103;FS=1.228;HaplotypeScore=55.3007;MLEAC=1;MLEAF=0.500;MQ=39.50;MQ0=11;MQRankSum=-0.696;QD=0.51;ReadPosRankSum=-3.033;SOR=0.808 GT:AD:DP:GQ:PL 0/1:69,13:85:70:70,0,1210
CP000253.1 795112 . C T 146.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.013;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.996;HaplotypeScore=39.6431;MLEAC=1;MLEAF=0.500;MQ=39.34;MQ0=11;MQRankSum=-1.907;QD=1.71;ReadPosRankSum=0.994;SOR=0.733 GT:AD:DP:GQ:PL 0/1:59,27:86:99:175,0,1174
CP000253.1 795127 . C T 14.91 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.497;DP=89;Dels=0.00;ExcessHet=3.0103;FS=1.153;HaplotypeScore=27.2461;MLEAC=1;MLEAF=0.500;MQ=38.05;MQ0=13;MQRankSum=-2.114;QD=0.18;ReadPosRankSum=-3.582;SOR=0.928 GT:AD:DP:GQ:PL 0/1:67,18:89:43:43,0,1245
CP000253.1 795148 . C T 159.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.413;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=60.3534;MLEAC=1;MLEAF=0.500;MQ=38.07;MQ0=13;MQRankSum=-2.686;QD=1.90;ReadPosRankSum=-1.439;SOR=0.805 GT:AD:DP:GQ:PL 0/1:55,29:84:99:188,0,1014
CP000253.1 795154 . A T 545.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.693;DP=68;Dels=0.00;ExcessHet=3.0103;FS=1.184;HaplotypeScore=47.2196;MLEAC=1;MLEAF=0.500;MQ=35.98;MQ0=11;MQRankSum=0.582;QD=10.92;ReadPosRankSum=2.173;SOR=0.871 GT:AD:DP:GQ:PL 0/1:23,27:68:99:574,0,174
CP000253.1 795157 . T C 967.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.503;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=42.4447;MLEAC=2;MLEAF=1.00;MQ=35.98;MQ0=11;MQRankSum=0.706;QD=14.89;ReadPosRankSum=-0.274;SOR=0.766 GT:AD:DP:GQ:PL 1/1:16,49:68:30:996,30,0
CP000253.1 795163 . T C 752.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.017;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=43.1687;MLEAC=1;MLEAF=0.500;MQ=35.98;MQ0=11;MQRankSum=2.492;QD=11.24;ReadPosRankSum=1.958;SOR=0.670 GT:AD:DP:GQ:PL 0/1:30,37:68:99:781,0,216
CP000253.1 795166 . C T 737.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.7903;MLEAC=1;MLEAF=0.500;MQ=35.98;MQ0=11;MQRankSum=2.537;QD=10.85;ReadPosRankSum=1.900;SOR=0.622 GT:AD:DP:GQ:PL 0/1:34,34:68:99:766,0,202
CP000253.1 795169 . T C 613.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.379;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.0061;MLEAC=1;MLEAF=0.500;MQ=35.98;MQ0=11;MQRankSum=2.142;QD=9.03;ReadPosRankSum=1.828;SOR=0.631 GT:AD:DP:GQ:PL 0/1:35,33:68:99:642,0,273
CP000253.1 795178 . C A 14.91 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.412;DP=54;Dels=0.00;ExcessHet=3.0103;FS=6.261;HaplotypeScore=24.8602;MLEAC=1;MLEAF=0.500;MQ=38.36;MQ0=6;MQRankSum=0.059;QD=0.28;ReadPosRankSum=-0.921;SOR=1.532 GT:AD:DP:GQ:PL 0/1:47,7:54:43:43,0,814
CP000253.1 795181 . C T 742.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.963;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0125;MLEAC=1;MLEAF=0.500;MQ=38.36;MQ0=6;MQRankSum=1.972;QD=14.28;ReadPosRankSum=1.349;SOR=0.760 GT:AD:DP:GQ:PL 0/1:19,33:54:99:771,0,110
CP000253.1 795184 . T C 740.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.390;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.4496;MLEAC=1;MLEAF=0.500;MQ=37.89;MQ0=6;MQRankSum=1.585;QD=13.98;ReadPosRankSum=1.654;SOR=0.546 GT:AD:DP:GQ:PL 0/1:18,35:53:99:769,0,155
CP000253.1 795187 . C T 792.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.520;DP=53;Dels=0.00;ExcessHet=3.0103;FS=1.297;HaplotypeScore=30.8544;MLEAC=1;MLEAF=0.500;MQ=37.89;MQ0=6;MQRankSum=1.755;QD=15.25;ReadPosRankSum=1.216;SOR=0.446 GT:AD:DP:GQ:PL 0/1:17,35:53:81:821,0,81
CP000253.1 795193 . T C 44.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.526;DP=49;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0732;MLEAC=1;MLEAF=0.500;MQ=38.57;MQ0=5;MQRankSum=-2.104;QD=0.93;ReadPosRankSum=-1.301;SOR=0.634 GT:AD:DP:GQ:PL 0/1:33,15:48:73:73,0,761
CP000253.1 795196 . C A 1073.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.8601;MLEAC=2;MLEAF=1.00;MQ=38.50;MQ0=5;QD=23.34;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,46:46:93:1102,93,0
CP000253.1 795205 . C T 615.79 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.605;DP=41;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.9712;MLEAC=2;MLEAF=1.00;MQ=37.88;MQ0=5;MQRankSum=0.078;QD=15.39;ReadPosRankSum=0.312;SOR=0.307 GT:AD:DP:GQ:PL 1/1:5,35:40:22:644,22,0
CP000253.1 795208 . G A 788.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.9657;MLEAC=2;MLEAF=1.00;MQ=37.88;MQ0=5;QD=20.76;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,38:40:69:817,69,0
CP000253.1 795211 . T C 576.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.762;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.7543;MLEAC=1;MLEAF=0.500;MQ=37.88;MQ0=5;MQRankSum=2.069;QD=14.07;ReadPosRankSum=0.890;SOR=0.716 GT:AD:DP:GQ:PL 0/1:16,25:41:76:605,0,76
CP000253.1 795232 . C A 88.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.042;DP=35;Dels=0.00;ExcessHet=3.0103;FS=5.792;HaplotypeScore=20.6810;MLEAC=1;MLEAF=0.500;MQ=37.69;MQ0=5;MQRankSum=-2.640;QD=2.54;ReadPosRankSum=0.374;SOR=1.879 GT:AD:DP:GQ:PL 0/1:16,19:35:99:117,0,257
CP000253.1 795247 . T C 88.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.859;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1698;MLEAC=1;MLEAF=0.500;MQ=31.54;MQ0=4;MQRankSum=1.806;QD=4.93;ReadPosRankSum=-0.128;SOR=1.675 GT:AD:DP:GQ:PL 0/1:13,5:19:65:117,0,65
CP000253.1 795250 . C A 130.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.493;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5162;MLEAC=2;MLEAF=1.00;MQ=30.65;MQ0=3;MQRankSum=0.672;QD=8.13;ReadPosRankSum=-0.401;SOR=0.593 GT:AD:DP:GQ:PL 1/1:2,14:16:12:158,12,0
CP000253.1 795253 . C T 22.79 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.180;DP=15;Dels=0.00;ExcessHet=3.0103;FS=3.979;HaplotypeScore=2.7554;MLEAC=1;MLEAF=0.500;MQ=31.52;MQ0=3;MQRankSum=-1.601;QD=1.52;ReadPosRankSum=0.852;SOR=1.029 GT:AD:DP:GQ:PL 0/1:6,9:15:51:51,0,78
CP000253.1 795256 . T C 54.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.473;DP=15;Dels=0.00;ExcessHet=3.0103;FS=3.979;HaplotypeScore=2.7554;MLEAC=1;MLEAF=0.500;MQ=31.52;MQ0=3;MQRankSum=0.871;QD=3.91;ReadPosRankSum=-0.156;SOR=3.601 GT:AD:DP:GQ:PL 0/1:8,6:15:48:83,0,48
CP000253.1 795259 . C T 19.82 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.299;DP=14;Dels=0.00;ExcessHet=3.0103;FS=3.979;HaplotypeScore=2.7602;MLEAC=1;MLEAF=0.500;MQ=32.14;MQ0=3;MQRankSum=1.308;QD=1.42;ReadPosRankSum=0.000;SOR=3.244 GT:AD:DP:GQ:PL 0/1:9,5:14:27:48,0,27
CP000253.1 795271 . C T 21.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3276;MLEAC=1;MLEAF=0.500;MQ=29.80;MQ0=3;MQRankSum=0.549;QD=1.68;ReadPosRankSum=-0.872;SOR=2.812 GT:AD:DP:GQ:PL 0/1:10,3:13:44:50,0,44
CP000253.1 795274 . T C 40.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.150;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1796;MLEAC=2;MLEAF=1.00;MQ=28.79;MQ0=3;MQRankSum=-0.887;QD=3.70;ReadPosRankSum=0.887;SOR=0.595 GT:AD:DP:GQ:PL 1/1:2,9:12:6:68,6,0
CP000253.1 795280 . G A 88.28 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8259;MLEAC=2;MLEAF=1.00;MQ=32.97;MQ0=2;QD=11.04;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,8:9:9:116,9,0
CP000253.1 795283 . T C 45.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.150;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8259;MLEAC=2;MLEAF=1.00;MQ=31.83;MQ0=2;MQRankSum=0.319;QD=9.15;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 1/1:1,4:8:6:73,6,0
CP000253.1 795288 . C A 46.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.674;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7934;MLEAC=2;MLEAF=1.00;MQ=31.83;MQ0=2;MQRankSum=0.210;QD=5.84;ReadPosRankSum=-0.674;SOR=0.941 GT:AD:DP:GQ:PL 1/1:2,6:8:6:74,6,0
CP000253.1 795289 . G C 71.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.282;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7934;MLEAC=2;MLEAF=1.00;MQ=31.83;MQ0=2;MQRankSum=0.524;QD=14.26;ReadPosRankSum=-0.524;SOR=1.981 GT:AD:DP:GQ:PL 1/1:1,4:8:9:99,9,0
CP000253.1 795298 . G A 70.28 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8152;MLEAC=2;MLEAF=1.00;MQ=31.83;MQ0=2;QD=14.06;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,5:8:9:98,9,0
CP000253.1 795316 . C A 10.90 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=23.35;MQ0=2;QD=2.18;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,5:5:3:37,3,0
CP000253.1 795349 . C T 28.75 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=26.08;MQ0=1;QD=9.58;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,3:3:6:56,6,0
CP000253.1 795358 . G A 35.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=26.08;MQ0=1;QD=11.91;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,3:3:6:63,6,0
CP000253.1 795364 . C T 23.76 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=26.08;MQ0=1;QD=7.92;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,3:3:6:51,6,0
CP000253.1 795382 . C T 619.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.821;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7866;MLEAC=2;MLEAF=1.00;MQ=42.12;MQ0=1;MQRankSum=-1.205;QD=18.78;ReadPosRankSum=3.426;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,32:34:51:648,51,0
CP000253.1 795385 . T C 566.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=42.12;MQ0=1;QD=16.67;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,34:34:45:595,45,0
CP000253.1 795388 . G A 633.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=42.12;MQ0=1;QD=19.21;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,33:34:51:662,51,0
CP000253.1 795397 . T C 865.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.360;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4695;MLEAC=2;MLEAF=1.00;MQ=44.83;MQ0=1;MQRankSum=-0.797;QD=18.42;ReadPosRankSum=3.019;SOR=0.080 GT:AD:DP:GQ:PL 1/1:4,43:47:52:894,52,0
CP000253.1 795415 . C T 1011.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.438;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9551;MLEAC=2;MLEAF=1.00;MQ=45.20;MQ0=1;MQRankSum=-0.303;QD=21.53;ReadPosRankSum=1.526;SOR=0.202 GT:AD:DP:GQ:PL 1/1:2,45:48:84:1040,84,0
CP000253.1 795418 . C T 995.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0884;MLEAC=2;MLEAF=1.00;MQ=45.20;MQ0=1;QD=21.19;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,47:48:84:1024,84,0
CP000253.1 795421 . T C 964.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.229;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0884;MLEAC=2;MLEAF=1.00;MQ=45.20;MQ0=1;MQRankSum=0.540;QD=20.10;ReadPosRankSum=0.492;SOR=0.216 GT:AD:DP:GQ:PL 1/1:2,46:48:78:993,78,0
CP000253.1 795424 . A C 1010.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2563;MLEAC=2;MLEAF=1.00;MQ=45.20;MQ0=1;QD=21.06;SOR=1.251 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1039,84,0
CP000253.1 795439 . C A 1069.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.812;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=48.9299;MLEAC=2;MLEAF=1.00;MQ=46.84;MQ0=1;MQRankSum=0.000;QD=20.18;ReadPosRankSum=2.541;SOR=0.120 GT:AD:DP:GQ:PL 1/1:3,50:54:84:1098,84,0
CP000253.1 795445 . C T 1406.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.934;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9270;MLEAC=2;MLEAF=1.00;MQ=49.74;MQ0=1;MQRankSum=0.607;QD=20.39;ReadPosRankSum=0.534;SOR=0.573 GT:AD:DP:GQ:PL 1/1:1,68:69:77:1435,77,0
CP000253.1 795454 . A C 1391.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.229;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8583;MLEAC=2;MLEAF=1.00;MQ=49.74;MQ0=1;MQRankSum=1.219;QD=20.17;ReadPosRankSum=0.514;SOR=0.284 GT:AD:DP:GQ:PL 1/1:2,67:69:99:1420,108,0
CP000253.1 795466 . T C 1711.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=50.36;MQ0=1;QD=23.45;SOR=1.577 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1740,129,0
CP000253.1 795469 . C T 1696.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=50.50;MQ0=1;QD=23.24;SOR=1.577 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1725,129,0
CP000253.1 795535 . A C 1532.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=56.52;MQ0=0;QD=28.92;SOR=1.938 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1561,117,0
CP000253.1 795564 . T G 1643.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=56.83;MQ0=0;QD=28.34;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1672,123,0
CP000253.1 795682 . A G 677.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.11;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:26:51:706,51,0
CP000253.1 795716 . A T 446.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:17:36:475,36,0
CP000253.1 795778 . G A 178.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:15:207,15,0
CP000253.1 796057 . G A 683.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.06;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:712,48,0
CP000253.1 796859 . C A 45.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:73,6,0
CP000253.1 796861 . C T 48.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:76,6,0
CP000253.1 796865 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 796868 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 796871 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 796873 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 796880 . G A 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 796889 . C G 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 797028 . A G 1305.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:93:1334,93,0
CP000253.1 797030 . A C 1304.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:93:1333,93,0
CP000253.1 797047 . A G 1329.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1358,96,0
CP000253.1 797051 . A T 1436.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1465,102,0
CP000253.1 797066 . T A 1609.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1638,114,0
CP000253.1 797095 . A T 2198.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2227,154,0
CP000253.1 797140 . T C 2026.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.785;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3236;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.52;ReadPosRankSum=1.330;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2055,141,0
CP000253.1 797141 . A G 2081.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.884;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3236;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.13;ReadPosRankSum=1.330;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2110,144,0
CP000253.1 797146 . T C 2058.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7798;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2087,144,0
CP000253.1 797149 . T A 2090.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2119,144,0
CP000253.1 797150 . G A 2081.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:89:99:2110,144,0
CP000253.1 797160 . A C 2218.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2247,154,0
CP000253.1 797164 . G A 2225.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2254,154,0
CP000253.1 797230 . C T 2184.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2213,156,0
CP000253.1 797353 . T C 1139.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1168,81,0
CP000253.1 797426 . A T 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 797503 . T C 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 797917 . A C 485.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:514,36,0
CP000253.1 797922 . G C 451.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:480,33,0
CP000253.1 798080 . C T 1146.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1175,81,0
CP000253.1 798090 . T C 1194.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:52:84:1223,84,0
CP000253.1 798107 . C T 1808.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1837,126,0
CP000253.1 798149 . T C 2212.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2241,154,0
CP000253.1 798180 . G A 2509.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2538,172,0
CP000253.1 799083 . T G 179.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:208,15,0
CP000253.1 799192 . T A 401.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8237;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:430,30,0
CP000253.1 799193 . A C 390.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:419,30,0
CP000253.1 799194 . T A 365.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:27:394,27,0
CP000253.1 799220 . C T 448.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.37;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:477,33,0
CP000253.1 799238 . T C 526.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:555,39,0
CP000253.1 799306 . A G 492.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:521,36,0
CP000253.1 799559 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 799755 . T A 264.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.42;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:10:21:293,21,0
CP000253.1 799778 . A G 258.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:287,21,0
CP000253.1 799794 . A G 268.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:297,21,0
CP000253.1 799888 . G A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 799975 . T G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 800075 . C T 3491.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=1.204 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3520,247,0
CP000253.1 800146 . A T 5311.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0128;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,230:232:99:5340,367,0
CP000253.1 800162 . T C 5452.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.835;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9046;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.63;ReadPosRankSum=-1.611;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,240:242:99:5481,382,0
CP000253.1 800228 . T C 6050.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6079,424,0
CP000253.1 800384 . G A 6014.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.0379;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,237:238:99:6043,427,0
CP000253.1 800435 . T C 5831.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1307;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,248:250:99:5860,415,0
CP000253.1 800480 . G T 5834.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,247:249:99:5863,412,0
CP000253.1 800666 . A G 3328.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=1.119 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3357,238,0
CP000253.1 800755 . A C 1379.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.708;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.03;ReadPosRankSum=0.753;SOR=0.781 GT:AD:DP:GQ:PL 1/1:1,52:53:99:1408,105,0
CP000253.1 800827 . T C 242.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.07;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:271,21,0
CP000253.1 801303 . C T 1051.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:75:1080,75,0
CP000253.1 801390 . T G 505.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.10;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,18:18:39:534,39,0
CP000253.1 801398 . T C 474.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,18:18:36:503,36,0
CP000253.1 801420 . A T 527.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:39:556,39,0
CP000253.1 801432 . C T 438.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:467,33,0
CP000253.1 801908 . C T 902.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.332;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.52;ReadPosRankSum=0.931;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,42:44:24:931,24,0
CP000253.1 802026 . G A 598.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:42:627,42,0
CP000253.1 802071 . G A 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 802127 . C T 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 802263 . T A 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 802394 . A C 231.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.843;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.08;ReadPosRankSum=1.117;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,10:11:18:260,18,0
CP000253.1 802437 . A T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 802626 . C T 931.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9662;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,38:39:69:960,69,0
CP000253.1 802938 . T A 654.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,26:26:48:683,48,0
CP000253.1 803283 . T C 324.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:24:353,24,0
CP000253.1 804430 . T G 463.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:33:492,33,0
CP000253.1 805351 . C T 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 805411 . G A 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6465;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 805546 . T A 1521.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.902;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.38;ReadPosRankSum=-0.744;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,67:68:99:1550,105,0
CP000253.1 805621 . C T 1525.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1554,105,0
CP000253.1 805632 . T C 1519.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.934;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.35;ReadPosRankSum=1.230;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,67:68:99:1548,105,0
CP000253.1 806759 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 806781 . T G 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 806787 . G T 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 806842 . T G 147.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:12:175,12,0
CP000253.1 806879 . A G 139.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:167,12,0
CP000253.1 807328 . T C 1723.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4374;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1752,123,0
CP000253.1 807403 . A T 1033.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1062,75,0
CP000253.1 807546 . C T 876.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4728;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:63:905,63,0
CP000253.1 807791 . C T 752.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:54:781,54,0
CP000253.1 807800 . C T 717.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:746,51,0
CP000253.1 807879 . C T 496.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;QD=24.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:22:36:518,36,0
CP000253.1 807905 . C A 581.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:42:610,42,0
CP000253.1 807909 . T C 565.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:24:42:594,42,0
CP000253.1 808182 . G A 1435.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:62:99:1464,102,0
CP000253.1 808205 . T A 1397.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3329;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:59:99:1426,102,0
CP000253.1 808594 . T A 3654.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3683,253,0
CP000253.1 808720 . A G 2290.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2319,163,0
CP000253.1 808924 . T A 187.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.88;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:216,15,0
CP000253.1 808967 . C T 191.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:220,15,0
CP000253.1 808987 . A C 322.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.99;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:24:351,24,0
CP000253.1 809010 . C A 329.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:24:358,24,0
CP000253.1 809026 . T G 396.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.04;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:425,30,0
CP000253.1 809116 . A G 710.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:739,51,0
CP000253.1 809322 . C T 347.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:27:376,27,0
CP000253.1 809352 . A C 387.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:416,30,0
CP000253.1 809453 . T A 134.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:162,12,0
CP000253.1 809501 . T C 230.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:259,18,0
CP000253.1 809684 . C T 575.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:604,42,0
CP000253.1 809870 . G A 260.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:289,21,0
CP000253.1 810086 . T C 4672.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=1.033 GT:AD:DP:GQ:PL 1/1:0,188:188:99:4701,328,0
CP000253.1 810346 . A C 4025.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=1.079 GT:AD:DP:GQ:PL 1/1:0,156:156:99:4054,283,0
CP000253.1 810448 . A T 943.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.60;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,33:33:69:972,69,0
CP000253.1 810451 . A G 921.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.93;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,33:33:69:950,69,0
CP000253.1 810457 . G A 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 810471 . A T 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 810480 . T C 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 810526 . G A 191.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:220,15,0
CP000253.1 810692 . C T 549.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:578,39,0
CP000253.1 810715 . A T 582.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:611,42,0
CP000253.1 810720 . A G 572.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:601,42,0
CP000253.1 810803 . C T 1399.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1428,99,0
CP000253.1 810821 . G A 1419.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1448,99,0
CP000253.1 810859 . A T 1461.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1490,102,0
CP000253.1 810907 . A T 1729.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1758,123,0
CP000253.1 810999 . C T 2547.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2576,181,0
CP000253.1 811165 . A G 5274.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,230:230:99:5303,367,0
CP000253.1 811177 . T A 5336.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,233:235:99:5365,370,0
CP000253.1 811189 . G A 5579.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3953;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,242:242:99:5608,385,0
CP000253.1 811225 . A G 5531.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,244:244:99:5560,382,0
CP000253.1 811520 . T G 3262.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.710;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2019;MLEAC=2;MLEAF=1.00;MQ=48.30;MQ0=25;MQRankSum=0.019;QD=18.75;ReadPosRankSum=-0.183;SOR=0.763 GT:AD:DP:GQ:PL 1/1:2,172:174:99:3291,241,0
CP000253.1 811550 . C T 961.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.896;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.577;HaplotypeScore=18.7815;MLEAC=1;MLEAF=0.500;MQ=48.13;MQ0=25;MQRankSum=-10.470;QD=5.04;ReadPosRankSum=-6.530;SOR=0.760 GT:AD:DP:GQ:PL 0/1:97,94:192:99:990,0,1968
CP000253.1 811585 . G A 1838.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.294;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.598;HaplotypeScore=15.6393;MLEAC=1;MLEAF=0.500;MQ=48.17;MQ0=25;MQRankSum=10.029;QD=8.84;ReadPosRankSum=4.866;SOR=0.681 GT:AD:DP:GQ:PL 0/1:112,96:210:99:1867,0,1306
CP000253.1 811614 . T A 1346.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.115;DP=231;Dels=0.01;ExcessHet=3.0103;FS=1.946;HaplotypeScore=63.9302;MLEAC=1;MLEAF=0.500;MQ=46.44;MQ0=27;MQRankSum=-7.931;QD=6.07;ReadPosRankSum=-1.835;SOR=0.670 GT:AD:DP:GQ:PL 0/1:110,112:229:99:1375,0,2044
CP000253.1 811630 . C T 341.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;DP=250;Dels=0.00;ExcessHet=3.0103;FS=4.021;HaplotypeScore=15.0429;MLEAC=1;MLEAF=0.500;MQ=37.91;MQ0=29;MQRankSum=-8.367;QD=1.38;ReadPosRankSum=-11.173;SOR=1.616 GT:AD:DP:GQ:PL 0/1:157,91:250:99:370,0,2729
CP000253.1 811677 . G A 400.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.098;DP=246;Dels=0.00;ExcessHet=3.0103;FS=4.486;HaplotypeScore=17.8521;MLEAC=1;MLEAF=0.500;MQ=32.39;MQ0=62;MQRankSum=-7.300;QD=1.65;ReadPosRankSum=-4.742;SOR=1.191 GT:AD:DP:GQ:PL 0/1:146,97:246:99:429,0,1909
CP000253.1 811885 . G C 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 811915 . A T 541.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:570,39,0
CP000253.1 811918 . A G 536.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:565,39,0
CP000253.1 811919 . T C 534.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:563,39,0
CP000253.1 813785 . A T 2283.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3118;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2312,163,0
CP000253.1 813848 . C A 1991.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2020,141,0
CP000253.1 813908 . A T 1604.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1633,114,0
CP000253.1 814269 . T C 1453.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:63:99:1482,102,0
CP000253.1 814470 . C T 1078.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.732;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6079;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.97;ReadPosRankSum=1.503;SOR=0.511 GT:AD:DP:GQ:PL 1/1:1,44:45:78:1107,78,0
CP000253.1 814548 . T C 976.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0711;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1005,69,0
CP000253.1 814560 . C T 964.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7264;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:993,69,0
CP000253.1 814563 . T C 938.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.608;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3033;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.83;ReadPosRankSum=-0.766;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,42:44:69:967,69,0
CP000253.1 814574 . C T 1042.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1071,75,0
CP000253.1 814593 . T C 1105.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:47:78:1134,78,0
CP000253.1 814605 . T C 1109.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1819;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:78:1138,78,0
CP000253.1 814758 . A T 388.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:417,30,0
CP000253.1 814842 . T G 440.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:469,33,0
CP000253.1 814940 . C T 572.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:42:601,42,0
CP000253.1 815027 . A C 517.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:546,39,0
CP000253.1 815060 . A G 825.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:60:854,60,0
CP000253.1 815078 . C T 691.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.62;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:51:720,51,0
CP000253.1 815240 . A G 979.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1008,69,0
CP000253.1 815246 . C T 1021.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4707;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.21;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:72:1050,72,0
CP000253.1 815279 . T C 990.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.697;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.54;ReadPosRankSum=-1.658;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,45:46:69:1019,69,0
CP000253.1 815315 . A G 961.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:69:990,69,0
CP000253.1 815462 . G A 717.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:746,51,0
CP000253.1 815648 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 815826 . C A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 815836 . A C 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 816429 . A T 896.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=1.209 GT:AD:DP:GQ:PL 1/1:0,36:36:66:925,66,0
CP000253.1 816678 . G C 3304.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2969;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,147:149:99:3333,229,0
CP000253.1 816698 . A G 3680.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.013;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.59;ReadPosRankSum=0.833;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,155:156:99:3709,256,0
CP000253.1 816711 . T G 3270.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.981;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7180;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.70;ReadPosRankSum=1.356;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,137:138:99:3299,229,0
CP000253.1 816713 . C T 3241.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5067;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3270,226,0
CP000253.1 816789 . C T 2206.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8028;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:96:99:2235,157,0
CP000253.1 816816 . A G 1905.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1934,135,0
CP000253.1 816843 . A G 1343.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1372,96,0
CP000253.1 816860 . T C 1001.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1030,72,0
CP000253.1 816876 . T C 959.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:69:988,69,0
CP000253.1 818881 . T C 2692.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,107:108:99:2721,196,0
CP000253.1 819025 . G A 4113.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,175:176:99:4142,286,0
CP000253.1 819369 . C A 1838.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.836;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.88;ReadPosRankSum=-0.788;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,76:77:99:1867,129,0
CP000253.1 819465 . G A 2903.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.066;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.23;ReadPosRankSum=0.153;SOR=0.279 GT:AD:DP:GQ:PL 1/1:1,124:125:99:2932,173,0
CP000253.1 820030 . G A 3596.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3625,256,0
CP000253.1 820053 . A G 3628.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.866;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.20;ReadPosRankSum=0.385;SOR=0.714 GT:AD:DP:GQ:PL 1/1:1,143:145:99:3657,259,0
CP000253.1 820191 . T C 4462.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8123;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4491,316,0
CP000253.1 820287 . A G 3956.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9445;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,165:166:99:3985,283,0
CP000253.1 820386 . G A 3873.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0448;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.09;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3902,283,0
CP000253.1 820440 . A T 4104.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1165;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,156:157:99:4133,295,0
CP000253.1 820449 . G A 4340.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3872;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4369,310,0
CP000253.1 820503 . T C 3561.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3590,259,0
CP000253.1 820680 . C T 4891.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9154;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,201:202:99:4920,349,0
CP000253.1 820905 . A T 2897.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9098;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=1.189 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2926,211,0
CP000253.1 821095 . G A 856.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=59.66;MQ0=0;QD=26.77;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,32:32:63:885,63,0
CP000253.1 821628 . A G 803.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.72;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,29:30:60:832,60,0
CP000253.1 821818 . G A 1870.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1899,132,0
CP000253.1 822763 . A G 2915.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1415;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=24.50;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,119:121:99:2944,208,0
CP000253.1 822766 . T A 3022.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7450;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=24.98;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3051,217,0
CP000253.1 822778 . T A 2950.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5763;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=25.01;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2979,208,0
CP000253.1 822781 . A G 2952.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7168;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=24.81;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2981,211,0
CP000253.1 823006 . C T 3178.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3745;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3207,220,0
CP000253.1 823193 . A G 2238.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2267,157,0
CP000253.1 823200 . C G 2149.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4244;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2178,150,0
CP000253.1 823312 . T C 551.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.816;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.1547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.99;ReadPosRankSum=1.738;SOR=0.793 GT:AD:DP:GQ:PL 1/1:1,22:23:42:580,42,0
CP000253.1 823376 . C T 443.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:472,33,0
CP000253.1 823422 . G A 172.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:201,15,0
CP000253.1 823603 . G A 367.41 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.872;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.34;ReadPosRankSum=0.091;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,18:19:8:395,0,8
CP000253.1 823720 . G A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 823768 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 823771 . T G 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 823962 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 824033 . C T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 824064 . A T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 824458 . C T 1482.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1511,105,0
CP000253.1 824551 . C T 1178.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1207,84,0
CP000253.1 824554 . T C 1243.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:90:1272,90,0
CP000253.1 824614 . C T 1300.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1329,93,0
CP000253.1 824933 . A G 3333.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.580;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7368;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.98;ReadPosRankSum=1.947;SOR=0.503 GT:AD:DP:GQ:PL 1/1:2,137:139:99:3362,235,0
CP000253.1 825061 . T C 5047.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.220;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0701;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.64;ReadPosRankSum=-0.138;SOR=0.817 GT:AD:DP:GQ:PL 1/1:2,221:224:99:5076,316,0
CP000253.1 825544 . C T 2759.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2788,199,0
CP000253.1 825628 . G A 1239.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1268,90,0
CP000253.1 825629 . C T 1218.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1247,90,0
CP000253.1 825633 . C T 1217.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1246,90,0
CP000253.1 825634 . A C 1204.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1233,90,0
CP000253.1 825635 . G T 1194.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1223,90,0
CP000253.1 825642 . A G 1226.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1255,90,0
CP000253.1 825643 . G A 1235.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1264,90,0
CP000253.1 825644 . C A 1232.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.02;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1261,90,0
CP000253.1 825647 . G A 1245.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1274,90,0
CP000253.1 825655 . C A 1234.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1263,90,0
CP000253.1 825659 . G A 1239.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1268,90,0
CP000253.1 825662 . T C 1235.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1264,90,0
CP000253.1 825663 . G A 1244.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.29;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1273,90,0
CP000253.1 825665 . C T 1232.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.02;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:90:1261,90,0
CP000253.1 825668 . A G 1228.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.58;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:44:90:1257,90,0
CP000253.1 825671 . T A 1368.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1397,99,0
CP000253.1 825881 . T C 2771.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2800,199,0
CP000253.1 825938 . C T 2752.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2781,202,0
CP000253.1 825959 . C T 2815.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,108:109:99:2844,205,0
CP000253.1 825980 . G A 2420.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.551;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6022;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.90;ReadPosRankSum=-0.616;SOR=0.836 GT:AD:DP:GQ:PL 1/1:2,88:90:99:2449,175,0
CP000253.1 825986 . T C 2201.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2230,160,0
CP000253.1 826020 . A G 2188.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.02;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2217,160,0
CP000253.1 826180 . T C 2189.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2218,157,0
CP000253.1 826316 . C T 2381.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2410,175,0
CP000253.1 826374 . T C 2894.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2923,211,0
CP000253.1 826377 . A G 1987.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.187;DP=217;Dels=0.00;ExcessHet=3.0103;FS=12.915;HaplotypeScore=9.9303;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=9.16;ReadPosRankSum=13.431;SOR=0.691 GT:AD:DP:GQ:PL 0/1:103,114:217:99:2016,0,1644
CP000253.1 826388 . A T 1691.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.451;DP=211;Dels=0.00;ExcessHet=3.0103;FS=14.074;HaplotypeScore=8.9409;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.02;ReadPosRankSum=13.321;SOR=0.737 GT:AD:DP:GQ:PL 0/1:109,102:211:99:1720,0,1862
CP000253.1 826389 . C T 1692.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.415;DP=211;Dels=0.00;ExcessHet=3.0103;FS=14.178;HaplotypeScore=8.0468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.10;ReadPosRankSum=13.256;SOR=0.700 GT:AD:DP:GQ:PL 0/1:108,101:211:99:1721,0,1829
CP000253.1 826395 . G A 1739.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.713;DP=211;Dels=0.00;ExcessHet=3.0103;FS=14.074;HaplotypeScore=9.9101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.25;ReadPosRankSum=13.321;SOR=0.737 GT:AD:DP:GQ:PL 0/1:109,102:211:99:1768,0,1824
CP000253.1 826398 . G A 1738.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.249;DP=211;Dels=0.00;ExcessHet=3.0103;FS=14.074;HaplotypeScore=11.6435;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.24;ReadPosRankSum=13.321;SOR=0.737 GT:AD:DP:GQ:PL 0/1:109,102:211:99:1767,0,1856
CP000253.1 826402 . A T 1740.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.645;DP=211;Dels=0.00;ExcessHet=3.0103;FS=11.663;HaplotypeScore=9.8553;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.29;ReadPosRankSum=13.299;SOR=0.711 GT:AD:DP:GQ:PL 0/1:109,101:211:99:1769,0,1838
CP000253.1 826407 . C T 1696.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.891;DP=211;Dels=0.00;ExcessHet=3.0103;FS=14.074;HaplotypeScore=14.2983;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.04;ReadPosRankSum=13.321;SOR=0.737 GT:AD:DP:GQ:PL 0/1:109,102:211:99:1725,0,1823
CP000253.1 826416 . T A 1773.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.538;DP=209;Dels=0.00;ExcessHet=3.0103;FS=11.394;HaplotypeScore=16.9054;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.49;ReadPosRankSum=12.618;SOR=0.695 GT:AD:DP:GQ:PL 0/1:107,102:209:99:1802,0,1856
CP000253.1 826419 . A G 1696.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.210;DP=209;Dels=0.00;ExcessHet=3.0103;FS=11.499;HaplotypeScore=15.1447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.16;ReadPosRankSum=12.452;SOR=0.692 GT:AD:DP:GQ:PL 0/1:108,100:209:99:1725,0,1835
CP000253.1 826424 . G A 1716.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.706;DP=204;Dels=0.00;ExcessHet=3.0103;FS=14.523;HaplotypeScore=14.2951;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.46;ReadPosRankSum=11.258;SOR=0.690 GT:AD:DP:GQ:PL 0/1:102,101:204:99:1745,0,1750
CP000253.1 826426 . A G 4647.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6402;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.78;ReadPosRankSum=-0.987;SOR=0.366 GT:AD:DP:GQ:PL 1/1:1,203:204:99:4676,322,0
CP000253.1 826438 . C T 1618.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;DP=201;Dels=0.00;ExcessHet=3.0103;FS=13.172;HaplotypeScore=16.1230;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.05;ReadPosRankSum=-7.627;SOR=1.003 GT:AD:DP:GQ:PL 0/1:103,98:201:99:1647,0,1827
CP000253.1 827140 . C A 4035.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.862;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.93;ReadPosRankSum=1.731;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,175:176:99:4064,283,0
CP000253.1 827827 . T G 1745.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1774,126,0
CP000253.1 828175 . T A 1490.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3286;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1519,108,0
CP000253.1 828281 . C T 3502.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0794;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3531,247,0
CP000253.1 828297 . T A 3785.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.678;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5957;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.51;ReadPosRankSum=0.748;SOR=0.757 GT:AD:DP:GQ:PL 1/1:2,159:163:99:3814,265,0
CP000253.1 828463 . T C 4766.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7055;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,194:195:99:4795,334,0
CP000253.1 828576 . C T 3070.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1781;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3099,226,0
CP000253.1 828579 . A G 3131.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1245;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3160,226,0
CP000253.1 828643 . A G 4187.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6439;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4216,295,0
CP000253.1 828688 . G A 4532.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.011;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7348;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.46;ReadPosRankSum=1.616;SOR=0.277 GT:AD:DP:GQ:PL 1/1:1,177:178:99:4561,319,0
CP000253.1 828692 . T A 4452.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4481,313,0
CP000253.1 828715 . T A 4945.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3152;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,199:200:99:4974,349,0
CP000253.1 828828 . A G 4902.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4157;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.57;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,208:209:99:4931,343,0
CP000253.1 829223 . T C 1439.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1468,108,0
CP000253.1 829249 . G A 1141.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:84:1170,84,0
CP000253.1 829411 . C T 838.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=22.07;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:40:60:867,60,0
CP000253.1 829425 . T C 1066.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7114;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=24.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1095,78,0
CP000253.1 829456 . T C 856.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7634;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=23.80;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:63:885,63,0
CP000253.1 830213 . G A 2233.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2262,160,0
CP000253.1 830543 . C A 660.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0483;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:689,48,0
CP000253.1 830762 . T C 135.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:163,12,0
CP000253.1 830777 . A T 130.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:158,12,0
CP000253.1 830816 . T C 222.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:251,18,0
CP000253.1 831474 . T C 1060.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8725;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:75:1089,75,0
CP000253.1 831737 . C A 268.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.68;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:297,21,0
CP000253.1 831755 . G A 330.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:27:359,27,0
CP000253.1 831802 . A G 269.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:24:298,24,0
CP000253.1 832924 . G A 2749.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7696;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2778,193,0
CP000253.1 833449 . A G 3469.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7705;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3498,244,0
CP000253.1 834625 . A T 2943.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,127:127:99:2972,205,0
CP000253.1 834803 . G A 1988.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2017,141,0
CP000253.1 835096 . A G 1477.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0799;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1506,108,0
CP000253.1 835098 . A G 1501.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:59:99:1530,108,0
CP000253.1 835227 . C T 3068.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2505;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,131:132:99:3097,214,0
CP000253.1 835255 . A C 3376.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3405,238,0
CP000253.1 835270 . C T 3261.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1449;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3290,229,0
CP000253.1 838770 . C A 1528.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1557,105,0
CP000253.1 838998 . T A 622.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.31;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:48:651,48,0
CP000253.1 839311 . T A 528.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:22:39:557,39,0
CP000253.1 839456 . C T 2092.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,86:88:99:2121,147,0
CP000253.1 839969 . G A 2177.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.807;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9868;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.42;ReadPosRankSum=-1.436;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,92:93:99:2206,154,0
CP000253.1 839993 . G A 2517.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.706;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.98;ReadPosRankSum=-1.139;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,104:107:99:2546,180,0
CP000253.1 840101 . T C 4534.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.772;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.65;ReadPosRankSum=-0.951;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,183:184:99:4563,319,0
CP000253.1 840242 . A G 4742.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3613;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,204:205:99:4771,328,0
CP000253.1 840284 . A G 4438.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,190:191:99:4467,307,0
CP000253.1 840661 . C G 394.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:423,30,0
CP000253.1 840962 . T A 929.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:66:958,66,0
CP000253.1 841019 . T C 1515.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1544,108,0
CP000253.1 841103 . G T 1861.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.779;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.43;ReadPosRankSum=0.856;SOR=0.300 GT:AD:DP:GQ:PL 1/1:1,82:83:99:1890,129,0
CP000253.1 841139 . G T 1993.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2762;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2022,141,0
CP000253.1 841191 . A G 1982.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1373;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2011,138,0
CP000253.1 841401 . A T 358.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:387,27,0
CP000253.1 841403 . C T 314.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:343,24,0
CP000253.1 841409 . A G 316.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:345,24,0
CP000253.1 841437 . G A 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 841501 . T A 177.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:206,15,0
CP000253.1 841519 . G A 136.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:164,12,0
CP000253.1 842462 . C T 5944.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,223:224:99:5973,427,0
CP000253.1 842840 . C T 4726.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,188:191:99:4755,334,0
CP000253.1 843378 . G A 751.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:780,54,0
CP000253.1 843379 . A G 732.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:761,54,0
CP000253.1 843444 . C T 573.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:25:42:602,42,0
CP000253.1 843456 . G T 492.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.175;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.47;ReadPosRankSum=-0.909;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,20:21:36:521,36,0
CP000253.1 843633 . T C 1177.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1206,84,0
CP000253.1 843890 . A T 2244.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8545;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2273,160,0
CP000253.1 844068 . G T 3081.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.852;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.71;ReadPosRankSum=0.706;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3110,217,0
CP000253.1 844196 . T A 2408.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2437,175,0
CP000253.1 844257 . A C 1702.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1731,123,0
CP000253.1 844260 . T C 1751.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5383;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.25;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1780,129,0
CP000253.1 844342 . G A 1694.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8768;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1723,120,0
CP000253.1 844401 . A T 2161.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2190,151,0
CP000253.1 844648 . A T 743.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:54:772,54,0
CP000253.1 844761 . C T 449.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:478,33,0
CP000253.1 844776 . A C 450.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:479,33,0
CP000253.1 844777 . A T 449.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:478,33,0
CP000253.1 844786 . G T 489.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:518,36,0
CP000253.1 844793 . T C 401.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:430,30,0
CP000253.1 844819 . T A 177.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:206,15,0
CP000253.1 844820 . G A 170.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.48;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:7:15:199,15,0
CP000253.1 844825 . T A 181.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:210,15,0
CP000253.1 844855 . A G 132.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:160,12,0
CP000253.1 844885 . C T 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 844886 . T G 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 844931 . T G 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 845005 . T C 439.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:468,33,0
CP000253.1 845020 . G A 494.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:523,36,0
CP000253.1 845054 . T A 762.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:54:791,54,0
CP000253.1 845213 . T A 2699.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3265;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2728,193,0
CP000253.1 845327 . C A 3815.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=1.260 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3844,274,0
CP000253.1 845570 . A G 5611.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.026;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.94;ReadPosRankSum=1.225;SOR=0.355 GT:AD:DP:GQ:PL 1/1:1,224:225:99:5640,394,0
CP000253.1 845753 . A G 920.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:66:949,66,0
CP000253.1 845933 . A G 742.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:771,54,0
CP000253.1 846098 . A T 1392.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:57:99:1421,99,0
CP000253.1 846194 . G A 1704.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1733,123,0
CP000253.1 846263 . T C 2022.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,81:82:99:2051,144,0
CP000253.1 846437 . T C 3372.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2654;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,145:147:99:3401,238,0
CP000253.1 846810 . G A 2795.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2419;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2824,199,0
CP000253.1 847201 . G A 2353.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2382,169,0
CP000253.1 847390 . G A 2314.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.56;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,84:85:99:2343,169,0
CP000253.1 847417 . A G 3712.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.529;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9831;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.26;ReadPosRankSum=0.201;SOR=1.022 GT:AD:DP:GQ:PL 1/1:2,145:149:99:3741,265,0
CP000253.1 847433 . A T 3906.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.880;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0798;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=0.747;SOR=0.674 GT:AD:DP:GQ:PL 1/1:1,155:156:99:3935,277,0
CP000253.1 847507 . G A 5784.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,239:240:99:5813,403,0
CP000253.1 847659 . C T 5719.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,236:236:99:5748,400,0
CP000253.1 847862 . C A 3373.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7677;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,137:138:99:3402,238,0
CP000253.1 847959 . C T 1313.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=53.8731;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1342,93,0
CP000253.1 847968 . A G 1180.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:49:87:1209,87,0
CP000253.1 847975 . A C 1084.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.041;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0202;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.14;ReadPosRankSum=0.319;SOR=0.769 GT:AD:DP:GQ:PL 1/1:1,48:49:78:1113,78,0
CP000253.1 847988 . A G 1104.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8526;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:45:81:1133,81,0
CP000253.1 848045 . T C 883.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:39:63:912,63,0
CP000253.1 848060 . T G 797.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:57:826,57,0
CP000253.1 848061 . C A 830.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:60:859,60,0
CP000253.1 848382 . C A 661.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.35;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:690,48,0
CP000253.1 848605 . A G 811.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.94;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:57:840,57,0
CP000253.1 848931 . G A 629.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:658,45,0
CP000253.1 849246 . C T 2158.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.311;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.99;ReadPosRankSum=2.543;SOR=0.884 GT:AD:DP:GQ:PL 1/1:3,87:90:99:2187,154,0
CP000253.1 849604 . A G 6426.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.67;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,241:242:99:6455,460,0
CP000253.1 850006 . C T 4982.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,207:208:99:5011,349,0
CP000253.1 850312 . T G 904.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,35:35:66:933,66,0
CP000253.1 850718 . C T 4275.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9569;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.034 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4304,304,0
CP000253.1 851012 . A G 3795.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3824,274,0
CP000253.1 852011 . G A 1384.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1413,102,0
CP000253.1 852131 . T C 566.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:595,42,0
CP000253.1 852494 . A C 986.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.93;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:69:1015,69,0
CP000253.1 853109 . T C 5208.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3635;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,200:200:99:5237,376,0
CP000253.1 854310 . G T 3525.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3554,241,0
CP000253.1 854582 . C T 2218.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3901;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2247,157,0
CP000253.1 854699 . C A 3198.81 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3227,223,0
CP000253.1 855041 . A T 1993.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5223;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,83:84:99:2022,141,0
CP000253.1 855080 . T C 1727.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1756,123,0
CP000253.1 855131 . T G 713.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.45;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:27:54:742,54,0
CP000253.1 855211 . T C 345.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.81;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:27:374,27,0
CP000253.1 855223 . T C 340.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.40;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:27:369,27,0
CP000253.1 855283 . T C 260.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:289,21,0
CP000253.1 855320 . C A 218.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:247,18,0
CP000253.1 855343 . A T 223.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:252,18,0
CP000253.1 855392 . A G 248.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:277,21,0
CP000253.1 855471 . T G 355.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:384,27,0
CP000253.1 856510 . A G 3311.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,136:137:99:3340,232,0
CP000253.1 856529 . A G 3363.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1285;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3392,235,0
CP000253.1 856606 . C T 3975.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.092;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7119;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.055;QD=23.95;ReadPosRankSum=0.474;SOR=0.743 GT:AD:DP:GQ:PL 1/1:2,164:168:99:4004,245,0
CP000253.1 856632 . C T 3945.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.199;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8554;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=24.36;ReadPosRankSum=-0.567;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,161:162:99:3974,245,0
CP000253.1 856681 . T C 3501.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.579;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3961;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=23.35;ReadPosRankSum=-1.502;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,149:150:99:3530,217,0
CP000253.1 856762 . G A 2870.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.948;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.34;ReadPosRankSum=-0.382;SOR=0.371 GT:AD:DP:GQ:PL 1/1:1,108:109:99:2899,176,0
CP000253.1 856912 . A G 2931.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5856;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,119:120:99:2960,211,0
CP000253.1 857122 . G A 3725.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,160:162:99:3754,262,0
CP000253.1 857380 . G A 1143.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.33;SOR=1.923 GT:AD:DP:GQ:PL 1/1:0,39:39:84:1172,84,0
CP000253.1 857383 . T C 1097.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.89;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,38:39:81:1126,81,0
CP000253.1 857499 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 857937 . T C 4060.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.004;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5360;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.32;ReadPosRankSum=1.722;SOR=0.581 GT:AD:DP:GQ:PL 1/1:1,166:167:99:4089,283,0
CP000253.1 858497 . A T 4553.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5023;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4582,322,0
CP000253.1 858647 . C G 3652.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1397;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,154:155:99:3681,262,0
CP000253.1 859172 . A T 3418.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5105;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.50;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3447,247,0
CP000253.1 859731 . G A 3461.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.63;SOR=1.170 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3490,250,0
CP000253.1 860114 . T A 5916.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4315;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,245:245:99:5945,409,0
CP000253.1 860153 . T C 5763.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,245:246:99:5792,403,0
CP000253.1 860177 . C T 5365.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9270;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,226:229:99:5394,376,0
CP000253.1 860336 . T C 3811.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4393;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.62;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3840,283,0
CP000253.1 860443 . G T 2111.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.451;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4114;MLEAC=2;MLEAF=1.00;MQ=54.62;MQ0=13;MQRankSum=-0.242;QD=23.46;ReadPosRankSum=0.585;SOR=0.539 GT:AD:DP:GQ:PL 1/1:14,76:90:99:2140,137,0
CP000253.1 860446 . G C 2163.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4114;MLEAC=2;MLEAF=1.00;MQ=54.62;MQ0=13;MQRankSum=-0.244;QD=24.31;ReadPosRankSum=0.570;SOR=0.569 GT:AD:DP:GQ:PL 1/1:14,75:90:99:2192,166,0
CP000253.1 860459 . G A 18.59 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.967;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=20.96;MQ0=13;MQRankSum=0.967;QD=1.16;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 1/1:14,2:16:3:45,3,0
CP000253.1 860464 . G A 18.59 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.967;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=20.96;MQ0=13;MQRankSum=0.967;QD=1.16;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 1/1:14,2:16:3:45,3,0
CP000253.1 860467 . G A 18.59 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.967;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=20.96;MQ0=13;MQRankSum=0.967;QD=1.16;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 1/1:14,2:16:3:45,3,0
CP000253.1 860485 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=20.96;MQ0=13;QD=1.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,15:16:3:45,3,0
CP000253.1 860500 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 860501 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 860503 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 860509 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 860513 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 860523 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 860525 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 860527 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 860529 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 860556 . C G 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=59.00;MQ0=0;MQRankSum=0.000;QD=2.78;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:39:39,0,39
CP000253.1 860569 . C T 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=52.78;MQ0=0;MQRankSum=0.524;QD=2.22;ReadPosRankSum=1.645;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:39:39,0,39
CP000253.1 860578 . G A 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=52.78;MQ0=0;MQRankSum=0.000;QD=2.78;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:5:39:39,0,39
CP000253.1 860581 . A G 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=52.78;MQ0=0;MQRankSum=0.524;QD=2.22;ReadPosRankSum=1.645;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:39:39,0,39
CP000253.1 860590 . C T 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=52.78;MQ0=0;MQRankSum=0.524;QD=2.22;ReadPosRankSum=1.645;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:39:39,0,39
CP000253.1 860599 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.78;MQ0=0;QD=12.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:6:90,6,0
CP000253.1 860635 . G T 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=52.78;MQ0=0;MQRankSum=-0.524;QD=2.22;ReadPosRankSum=1.645;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:39:39,0,39
CP000253.1 860761 . T A 479.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.98;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:39:508,39,0
CP000253.1 861406 . G T 3276.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7954;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3305,226,0
CP000253.1 861493 . G T 2508.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9524;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,102:104:99:2537,181,0
CP000253.1 861801 . T C 393.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.660;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.16;ReadPosRankSum=1.125;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,16:17:33:422,33,0
CP000253.1 861989 . A C 1443.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:56:99:1472,105,0
CP000253.1 861992 . T C 1379.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1408,99,0
CP000253.1 861998 . A C 1442.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1471,105,0
CP000253.1 862019 . T C 1455.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1484,105,0
CP000253.1 862022 . A G 1471.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1500,105,0
CP000253.1 862061 . A G 1574.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1603,111,0
CP000253.1 862964 . G A 2835.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0353;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2864,205,0
CP000253.1 863024 . G A 1860.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2923;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.308 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1889,135,0
CP000253.1 863192 . T C 1853.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7032;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1882,135,0
CP000253.1 863231 . A G 1919.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1560;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:80:99:1948,138,0
CP000253.1 863637 . C A 6093.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,238:239:99:6122,430,0
CP000253.1 864639 . G A 176.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.48;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:205,15,0
CP000253.1 865001 . A G 3062.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6230;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3091,217,0
CP000253.1 865585 . A C 4824.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.932;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.87;ReadPosRankSum=-1.241;SOR=0.402 GT:AD:DP:GQ:PL 1/1:1,193:195:99:4853,340,0
CP000253.1 865810 . C T 1935.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1964,135,0
CP000253.1 865828 . T G 1909.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1938,135,0
CP000253.1 865903 . A G 2167.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2196,151,0
CP000253.1 866029 . C T 3111.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3140,214,0
CP000253.1 866080 . C T 2569.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1421;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:113:99:2598,178,0
CP000253.1 866182 . A G 1129.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1158,81,0
CP000253.1 866207 . A T 755.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:57:784,57,0
CP000253.1 866371 . T A 180.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.710;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=1;MLEAF=0.500;MQ=50.99;MQ0=0;MQRankSum=3.951;QD=11.30;ReadPosRankSum=3.951;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,8:16:99:209,0,145
CP000253.1 866379 . T C 190.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.189;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=1;MLEAF=0.500;MQ=50.99;MQ0=0;MQRankSum=3.951;QD=11.92;ReadPosRankSum=3.361;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,8:16:99:219,0,144
CP000253.1 866385 . C T 209.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:238,18,0
CP000253.1 866387 . T A 220.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:249,18,0
CP000253.1 866602 . T G 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 867461 . T A 1137.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1166,81,0
CP000253.1 867470 . T A 1195.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1224,84,0
CP000253.1 867476 . A T 1069.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:75:1098,75,0
CP000253.1 867503 . A T 1060.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:75:1089,75,0
CP000253.1 867509 . T C 638.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:667,45,0
CP000253.1 867512 . C T 578.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:607,42,0
CP000253.1 867513 . A C 582.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.005;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.58;ReadPosRankSum=1.737;SOR=0.458 GT:AD:DP:GQ:PL 1/1:1,26:27:42:611,42,0
CP000253.1 867518 . C T 587.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.77;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:616,42,0
CP000253.1 867524 . A T 589.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:618,42,0
CP000253.1 867542 . C T 504.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.95;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:533,36,0
CP000253.1 867567 . G A 189.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:218,15,0
CP000253.1 867569 . T A 190.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:219,15,0
CP000253.1 867575 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 867576 . C A 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 867581 . C T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 867602 . T G 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 867603 . G A 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 867648 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 867719 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 867789 . G A 500.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.77;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:529,36,0
CP000253.1 867902 . C T 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 867959 . C T 235.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.837;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.65;ReadPosRankSum=1.776;SOR=0.477 GT:AD:DP:GQ:PL 1/1:1,11:12:18:264,18,0
CP000253.1 868067 . G T 769.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:54:798,54,0
CP000253.1 868154 . G A 723.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:51:752,51,0
CP000253.1 868901 . G T 1084.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1113,78,0
CP000253.1 869233 . C T 2353.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3641;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,103:105:99:2382,163,0
CP000253.1 869372 . T A 1396.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1425,99,0
CP000253.1 869387 . T C 1290.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:51:93:1319,93,0
CP000253.1 869390 . A G 1339.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1229;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:55:96:1368,96,0
CP000253.1 869444 . T C 1747.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4334;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1776,126,0
CP000253.1 869825 . T C 5191.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,214:216:99:5220,373,0
CP000253.1 869972 . T C 5588.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,214:214:99:5617,403,0
CP000253.1 870062 . T C 4648.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3020;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,183:185:99:4677,331,0
CP000253.1 870071 . G A 4651.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4680,331,0
CP000253.1 870080 . G A 4537.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4566,325,0
CP000253.1 870083 . C T 4419.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7182;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,175:176:99:4448,316,0
CP000253.1 870089 . A T 5051.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.884;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0907;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.31;ReadPosRankSum=1.372;SOR=0.273 GT:AD:DP:GQ:PL 1/1:1,191:193:99:5080,361,0
CP000253.1 870122 . T C 4950.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4979,358,0
CP000253.1 870146 . A T 4592.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,174:175:99:4621,331,0
CP000253.1 870149 . T A 4712.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.08;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4741,337,0
CP000253.1 870155 . T C 4498.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,168:170:99:4527,322,0
CP000253.1 870158 . T C 4515.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4544,328,0
CP000253.1 870161 . A C 4446.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9569;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.16;ReadPosRankSum=-0.877;SOR=0.356 GT:AD:DP:GQ:PL 1/1:1,169:170:99:4475,322,0
CP000253.1 870164 . G C 4537.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0628;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.69;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4566,325,0
CP000253.1 870185 . G A 5203.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,199:199:99:5232,370,0
CP000253.1 870191 . C T 5083.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.811;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.94;ReadPosRankSum=0.566;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,195:197:99:5112,364,0
CP000253.1 870194 . G A 5110.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.964;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9393;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.48;ReadPosRankSum=1.113;SOR=0.323 GT:AD:DP:GQ:PL 1/1:1,192:193:99:5139,364,0
CP000253.1 870200 . A T 4993.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3394;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.09;ReadPosRankSum=1.315;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,198:199:99:5022,335,0
CP000253.1 870218 . C T 5198.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3461;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,206:207:99:5227,376,0
CP000253.1 870227 . G A 5022.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7642;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,192:193:99:5051,358,0
CP000253.1 870230 . G A 4974.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.91;ReadPosRankSum=1.182;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,191:192:99:5003,352,0
CP000253.1 870233 . T A 5148.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,197:197:99:5177,364,0
CP000253.1 870239 . C A 5402.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.901;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1858;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.73;ReadPosRankSum=-1.040;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,209:211:99:5431,385,0
CP000253.1 870245 . A G 5342.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.744;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8278;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.44;ReadPosRankSum=0.842;SOR=0.331 GT:AD:DP:GQ:PL 1/1:1,209:212:99:5371,382,0
CP000253.1 870251 . A T 5537.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,215:216:99:5566,391,0
CP000253.1 870290 . T C 5442.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.683;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3311;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.55;ReadPosRankSum=1.937;SOR=0.722 GT:AD:DP:GQ:PL 1/1:2,211:214:99:5471,391,0
CP000253.1 870519 . T G 5966.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0213;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,249:249:99:5995,418,0
CP000253.1 870698 . C T 3096.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7633;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3125,220,0
CP000253.1 870740 . G T 2301.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8884;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=1.080 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2330,166,0
CP000253.1 870764 . G A 1935.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1964,138,0
CP000253.1 870773 . G A 1889.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6112;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.091 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1918,135,0
CP000253.1 870815 . T C 960.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:72:989,72,0
CP000253.1 871446 . T C 1106.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:44:81:1135,81,0
CP000253.1 871460 . T G 1526.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1555,108,0
CP000253.1 871595 . G A 2680.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2709,187,0
CP000253.1 871610 . C T 2656.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2685,187,0
CP000253.1 871613 . A G 2789.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2818,196,0
CP000253.1 871842 . C T 2615.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.13;SOR=1.240 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2644,193,0
CP000253.1 872171 . C T 2319.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.74;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2348,172,0
CP000253.1 872342 . G A 3713.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.919;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.81;ReadPosRankSum=0.711;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,155:156:99:3742,259,0
CP000253.1 872531 . T C 4009.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3369;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4038,280,0
CP000253.1 872577 . A G 2558.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2587,181,0
CP000253.1 872645 . C T 1884.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1913,135,0
CP000253.1 872671 . G A 1351.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3589;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1380,96,0
CP000253.1 872801 . G A 1127.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=1.154 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1156,81,0
CP000253.1 872803 . G A 1139.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=1.154 GT:AD:DP:GQ:PL 1/1:0,45:45:84:1168,84,0
CP000253.1 872937 . T C 1855.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1884,132,0
CP000253.1 873032 . C T 1659.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:71:99:1688,117,0
CP000253.1 873071 . A G 1893.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1922,138,0
CP000253.1 873413 . C G 2060.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.967;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6439;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.42;ReadPosRankSum=-1.343;SOR=0.232 GT:AD:DP:GQ:PL 1/1:1,87:88:99:2089,147,0
CP000253.1 873557 . G A 1986.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,87:88:99:2015,138,0
CP000253.1 873866 . A T 253.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:282,21,0
CP000253.1 874028 . T C 967.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:69:996,69,0
CP000253.1 874172 . C T 2635.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,110:111:99:2664,184,0
CP000253.1 874366 . G A 4283.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9140;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4312,298,0
CP000253.1 874478 . A G 2569.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8084;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2598,184,0
CP000253.1 874638 . A G 502.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:39:531,39,0
CP000253.1 874677 . G A 513.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:542,39,0
CP000253.1 874679 . G A 511.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:540,39,0
CP000253.1 874719 . G A 782.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.96;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:60:811,60,0
CP000253.1 874769 . A G 1091.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.99;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:81:1120,81,0
CP000253.1 874807 . G A 2111.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,81:82:99:2140,153,0
CP000253.1 874838 . C A 4173.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3434;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4202,295,0
CP000253.1 874868 . A G 4768.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4287;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,205:205:99:4797,331,0
CP000253.1 874913 . G A 5728.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,241:241:99:5757,400,0
CP000253.1 875441 . T A 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 875498 . A G 146.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:8:12:174,12,0
CP000253.1 875921 . T C 1589.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:71:99:1618,111,0
CP000253.1 876005 . G A 566.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:595,42,0
CP000253.1 876982 . A G 2074.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1990;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,83:84:99:2103,150,0
CP000253.1 877190 . C A 4064.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,176:178:99:4093,280,0
CP000253.1 877209 . T G 3806.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7755;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.93;ReadPosRankSum=1.441;SOR=0.360 GT:AD:DP:GQ:PL 1/1:1,165:166:99:3835,265,0
CP000253.1 877383 . T A 784.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6686;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:57:813,57,0
CP000253.1 877662 . T C 4021.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4050,286,0
CP000253.1 877722 . T C 3958.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5722;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.045 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3987,283,0
CP000253.1 877752 . G A 3816.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,150:152:99:3845,274,0
CP000253.1 878138 . T C 2578.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2266;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=1.115 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2607,190,0
CP000253.1 878208 . G A 1957.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1986,141,0
CP000253.1 878271 . A G 2217.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2246,157,0
CP000253.1 878304 . A C 2310.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.800;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.34;ReadPosRankSum=-0.665;SOR=0.487 GT:AD:DP:GQ:PL 1/1:1,98:99:99:2339,163,0
CP000253.1 878315 . C T 2696.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.871;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2892;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.66;ReadPosRankSum=-0.274;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,113:115:99:2725,170,0
CP000253.1 878481 . T G 2231.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2260,157,0
CP000253.1 878501 . A T 1853.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1882,129,0
CP000253.1 878605 . C T 877.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:63:906,63,0
CP000253.1 878958 . G A 1649.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3761;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.61;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1678,120,0
CP000253.1 878961 . A G 1559.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.714;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6421;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=-1.393;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1588,114,0
CP000253.1 878964 . C G 1629.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6400;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1658,120,0
CP000253.1 879847 . G A 2550.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5654;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2579,181,0
CP000253.1 880080 . T G 3213.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3242,226,0
CP000253.1 880105 . C A 2912.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2941,205,0
CP000253.1 880232 . T G 547.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:42:576,42,0
CP000253.1 880242 . T C 474.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,18:18:36:503,36,0
CP000253.1 880666 . T G 1195.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:54:84:1224,84,0
CP000253.1 880726 . T C 1692.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1721,117,0
CP000253.1 881203 . T C 181.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:8:15:210,15,0
CP000253.1 881470 . T C 263.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:292,21,0
CP000253.1 881605 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 881866 . A T 705.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:51:734,51,0
CP000253.1 881911 . A T 781.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6549;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:57:810,57,0
CP000253.1 882320 . T A 1787.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1816,126,0
CP000253.1 882793 . T C 931.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:40:66:960,66,0
CP000253.1 884669 . T C 1085.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.723;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.62;ReadPosRankSum=-0.181;SOR=0.780 GT:AD:DP:GQ:PL 1/1:2,46:48:40:1114,40,0
CP000253.1 884884 . G A 572.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:42:601,42,0
CP000253.1 884930 . T C 446.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:33:475,33,0
CP000253.1 884981 . T C 316.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:345,24,0
CP000253.1 884987 . C A 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 885020 . A G 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 885349 . C A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 885403 . T C 52.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:80,6,0
CP000253.1 885450 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 885465 . G T 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 885548 . T C 89.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:117,9,0
CP000253.1 885802 . A G 642.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.73;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:45:671,45,0
CP000253.1 885820 . A C 773.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.91;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:54:802,54,0
CP000253.1 886165 . T C 143.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:7:12:171,12,0
CP000253.1 886695 . G C 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 887765 . A G 235.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:264,18,0
CP000253.1 887786 . A G 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 887834 . A C 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 888075 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 888633 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 888785 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 888787 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 888819 . T C 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 889038 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 889047 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 889048 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 889054 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 889059 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 889143 . G T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 889156 . A C 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 889159 . A C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 889162 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 889174 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889177 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889195 . C T 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 889198 . A G 52.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0
CP000253.1 889204 . T C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889211 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889213 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889221 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889222 . T A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889225 . T A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889228 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889231 . G C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889243 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889249 . T C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889252 . A G 52.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0
CP000253.1 889259 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889263 . T C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889264 . T A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889268 . T C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889270 . A T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889273 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889274 . G A 51.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0
CP000253.1 889278 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889279 . G T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 889294 . T A 1910.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.79;MQ0=0;QD=23.30;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1939,132,0
CP000253.1 889301 . T C 1889.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.79;MQ0=0;QD=23.05;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1918,132,0
CP000253.1 889303 . A G 1909.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.79;MQ0=0;QD=23.29;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1938,132,0
CP000253.1 889306 . T A 1905.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.79;MQ0=0;QD=23.24;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1934,132,0
CP000253.1 889309 . C T 1953.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=23.26;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:1982,135,0
CP000253.1 889321 . T A 1960.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=23.34;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:1989,135,0
CP000253.1 889324 . T A 1953.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=23.26;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:1982,135,0
CP000253.1 889327 . A T 1939.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=23.09;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:1968,135,0
CP000253.1 889330 . T C 1957.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=23.31;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:1986,135,0
CP000253.1 889333 . C A 1934.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=23.03;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:1963,135,0
CP000253.1 889339 . T A 2721.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=22.31;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2750,187,0
CP000253.1 889354 . T C 2802.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=22.24;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,126:127:99:2831,193,0
CP000253.1 889357 . A T 2818.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=22.20;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,127:127:99:2847,193,0
CP000253.1 889370 . G A 2890.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=22.58;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:129:99:2919,199,0
CP000253.1 889372 . T C 2897.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=22.46;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,129:129:99:2926,199,0
CP000253.1 889374 . G C 2893.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=22.61;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:129:99:2922,199,0
CP000253.1 889378 . C T 2868.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=22.41;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:129:99:2897,196,0
CP000253.1 889379 . A G 2898.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=22.47;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,129:129:99:2927,199,0
CP000253.1 889420 . C T 3180.76 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3209,217,0
CP000253.1 889504 . T A 1844.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1873,129,0
CP000253.1 889517 . C A 1557.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.901;DP=63;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2422;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.13;ReadPosRankSum=0.280;SOR=0.940 GT:AD:DP:GQ:PL 1/1:1,61:62:99:1586,111,0
CP000253.1 889665 . A G 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 889912 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 889917 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 889918 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 889970 . G T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 890043 . G A 451.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.948;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6040;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.53;ReadPosRankSum=1.106;SOR=0.663 GT:AD:DP:GQ:PL 1/1:1,21:22:33:480,33,0
CP000253.1 890046 . G A 499.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:528,36,0
CP000253.1 890228 . G A 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 890243 . C T 315.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.05;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:344,24,0
CP000253.1 890466 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 890552 . C T 329.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:358,24,0
CP000253.1 890981 . T A 177.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.65;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:206,15,0
CP000253.1 890984 . A T 166.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:195,15,0
CP000253.1 891180 . G A 1526.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,60:61:99:1555,108,0
CP000253.1 891285 . T C 2062.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2091,144,0
CP000253.1 891322 . T G 2159.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2188,151,0
CP000253.1 891354 . C T 2050.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2079,144,0
CP000253.1 891543 . C T 1253.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1282,90,0
CP000253.1 891657 . T A 1034.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1063,75,0
CP000253.1 891699 . A T 763.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:57:792,57,0
CP000253.1 892003 . A C 2548.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.716;DP=99;Dels=0.00;ExcessHet=3.0103;FS=3.829;HaplotypeScore=9.7266;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.75;ReadPosRankSum=1.525;SOR=0.842 GT:AD:DP:GQ:PL 1/1:1,98:99:99:2577,184,0
CP000253.1 892385 . A T 3592.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.334;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9143;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.44;ReadPosRankSum=0.293;SOR=0.179 GT:AD:DP:GQ:PL 1/1:2,145:148:99:3621,225,0
CP000253.1 892607 . T C 3759.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9007;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.67;SOR=1.147 GT:AD:DP:GQ:PL 1/1:0,141:142:99:3788,274,0
CP000253.1 892673 . A G 3861.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.788;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.27;ReadPosRankSum=-0.200;SOR=0.355 GT:AD:DP:GQ:PL 1/1:1,146:149:99:3890,283,0
CP000253.1 892679 . A T 3794.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,146:148:99:3823,280,0
CP000253.1 892685 . T C 4007.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,149:150:99:4036,295,0
CP000253.1 892703 . T A 3650.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,140:142:99:3679,265,0
CP000253.1 892781 . T C 3331.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9042;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=1.099 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3360,247,0
CP000253.1 892820 . T C 3096.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5353;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.41;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,113:115:99:3125,226,0
CP000253.1 892934 . T C 3211.76 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.17;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3240,235,0
CP000253.1 893198 . T A 3327.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=1.043 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3356,238,0
CP000253.1 893216 . T C 3112.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5872;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3141,223,0
CP000253.1 893343 . C T 199.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.55;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:18:228,18,0
CP000253.1 893390 . A T 138.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:166,12,0
CP000253.1 893441 . A G 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 893708 . G C 272.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:301,21,0
CP000253.1 893819 . C G 240.84 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.53;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:18:269,18,0
CP000253.1 893849 . T G 227.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:256,18,0
CP000253.1 894421 . A T 2117.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2146,150,0
CP000253.1 894766 . A G 2993.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3022,214,0
CP000253.1 895047 . T C 1757.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6493;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1786,123,0
CP000253.1 895452 . T C 2419.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.939;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.05;ReadPosRankSum=0.000;SOR=0.346 GT:AD:DP:GQ:PL 1/1:1,104:106:99:2448,169,0
CP000253.1 895665 . A G 1461.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1490,102,0
CP000253.1 895749 . A G 1294.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:90:1323,90,0
CP000253.1 895839 . C T 1049.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1078,75,0
CP000253.1 896104 . C T 2611.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7824;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,104:106:99:2640,187,0
CP000253.1 896119 . G A 2671.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5066;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.951 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2700,190,0
CP000253.1 896125 . A G 2784.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2143;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2813,196,0
CP000253.1 896281 . G A 4227.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7735;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4256,301,0
CP000253.1 898914 . A T 544.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.586;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2692;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.24;ReadPosRankSum=1.391;SOR=1.872 GT:AD:DP:GQ:PL 1/1:1,19:22:45:573,45,0
CP000253.1 900500 . C A 232.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.593;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.87;ReadPosRankSum=0.967;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,8:9:21:261,21,0
CP000253.1 900705 . G T 2115.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.313;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6739;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=6.746;QD=23.25;ReadPosRankSum=-0.122;SOR=1.022 GT:AD:DP:GQ:PL 1/1:2,89:92:99:2144,154,0
CP000253.1 900960 . C T 2205.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=1.013 GT:AD:DP:GQ:PL 1/1:0,84:85:99:2234,160,0
CP000253.1 901171 . A T 1664.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1693,117,0
CP000253.1 901182 . T A 1817.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1846,126,0
CP000253.1 901891 . A G 495.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:524,36,0
CP000253.1 902084 . A C 298.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:24:327,24,0
CP000253.1 902485 . A G 1903.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.22;ReadPosRankSum=0.951;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,81:82:99:1932,132,0
CP000253.1 902884 . C T 1408.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8145;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:61:99:1437,99,0
CP000253.1 903280 . A G 477.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:36:506,36,0
CP000253.1 903289 . C G 525.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:39:554,39,0
CP000253.1 903310 . A G 434.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:463,33,0
CP000253.1 903328 . A G 442.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:471,33,0
CP000253.1 903337 . A T 439.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:468,33,0
CP000253.1 903346 . C A 387.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:416,30,0
CP000253.1 903382 . C T 132.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:160,12,0
CP000253.1 903433 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.18;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:9:134,9,0
CP000253.1 903436 . G A 128.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:156,12,0
CP000253.1 903550 . A G 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 903556 . T A 400.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:429,30,0
CP000253.1 903557 . C A 407.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:436,30,0
CP000253.1 903564 . T A 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 903565 . G A 406.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:435,30,0
CP000253.1 903568 . C T 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 903572 . A G 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 903576 . G A 450.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:479,33,0
CP000253.1 903580 . G A 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 903584 . G C 448.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:477,33,0
CP000253.1 903604 . T C 593.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:45:622,45,0
CP000253.1 903654 . A C 538.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:567,42,0
CP000253.1 903674 . A G 788.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.794;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.54;ReadPosRankSum=1.495;SOR=0.405 GT:AD:DP:GQ:PL 1/1:1,34:35:57:817,57,0
CP000253.1 903762 . C T 1627.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1656,114,0
CP000253.1 903812 . A G 1614.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.799;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0695;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.07;ReadPosRankSum=0.025;SOR=0.259 GT:AD:DP:GQ:PL 1/1:1,69:70:99:1643,114,0
CP000253.1 903818 . T C 1524.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5385;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:69:99:1553,111,0
CP000253.1 903845 . C T 1481.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5433;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1510,105,0
CP000253.1 903872 . C T 931.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:66:960,66,0
CP000253.1 903902 . A G 922.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:951,66,0
CP000253.1 904034 . G T 225.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:254,18,0
CP000253.1 904073 . C T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 904136 . C T 301.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:330,24,0
CP000253.1 904202 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 904208 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 904217 . A G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 904226 . C A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 904235 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 904374 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 904430 . C T 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 904439 . G T 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 904496 . C T 130.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:158,12,0
CP000253.1 904551 . C T 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 904622 . A G 131.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:159,12,0
CP000253.1 904663 . T G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 904668 . A G 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 904700 . G A 94.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:122,9,0
CP000253.1 905471 . A C 302.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.63;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:331,24,0
CP000253.1 905566 . A T 695.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:724,51,0
CP000253.1 905749 . G C 2001.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=1.432 GT:AD:DP:GQ:PL 1/1:0,76:77:99:2030,144,0
CP000253.1 905752 . C T 2192.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.07;SOR=1.497 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2221,160,0
CP000253.1 905788 . T G 2557.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7759;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2586,187,0
CP000253.1 905914 . T C 4120.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.102;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5086;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.15;ReadPosRankSum=1.655;SOR=0.277 GT:AD:DP:GQ:PL 1/1:1,177:180:99:4149,263,0
CP000253.1 906178 . A T 4640.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4669,331,0
CP000253.1 908144 . T C 839.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1258;MLEAC=2;MLEAF=1.00;MQ=59.45;MQ0=0;QD=23.33;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:60:868,60,0
CP000253.1 908209 . T A 974.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5981;MLEAC=2;MLEAF=1.00;MQ=59.54;MQ0=0;QD=22.67;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1003,69,0
CP000253.1 908470 . C T 570.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:42:599,42,0
CP000253.1 908473 . A G 608.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:45:637,45,0
CP000253.1 908515 . G T 613.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:642,45,0
CP000253.1 908884 . A T 393.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:30:422,30,0
CP000253.1 908888 . A T 389.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:30:418,30,0
CP000253.1 908903 . T A 488.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:517,36,0
CP000253.1 909004 . A G 661.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.941;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.82;ReadPosRankSum=1.738;SOR=0.283 GT:AD:DP:GQ:PL 1/1:1,28:29:50:690,50,0
CP000253.1 909018 . G T 739.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:54:768,54,0
CP000253.1 909179 . C T 584.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:613,42,0
CP000253.1 909218 . A G 233.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:262,18,0
CP000253.1 909229 . T A 230.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:259,18,0
CP000253.1 909396 . A G 139.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:167,12,0
CP000253.1 909732 . T C 781.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7245;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:35:57:810,57,0
CP000253.1 910041 . A T 1533.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1562,108,0
CP000253.1 910099 . A T 1325.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1354,93,0
CP000253.1 910257 . G A 662.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:691,48,0
CP000253.1 910464 . A T 690.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:719,51,0
CP000253.1 911500 . G A 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 911556 . C A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 911562 . T A 98.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:126,9,0
CP000253.1 911785 . A G 273.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:302,21,0
CP000253.1 912499 . G A 1217.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,47:48:90:1246,90,0
CP000253.1 912713 . T C 3623.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.872;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.79;ReadPosRankSum=-1.232;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,158:159:99:3652,250,0
CP000253.1 912962 . G A 646.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2649;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.95;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:25:48:675,48,0
CP000253.1 913014 . A G 353.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:382,27,0
CP000253.1 913196 . T C 2942.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2971,205,0
CP000253.1 913227 . C G 3312.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1202;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3341,232,0
CP000253.1 913705 . T C 167.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:196,15,0
CP000253.1 914019 . T C 947.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:69:976,69,0
CP000253.1 914321 . A G 1889.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1918,132,0
CP000253.1 914426 . T A 1505.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1534,108,0
CP000253.1 914967 . C T 4867.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.872;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9528;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.31;ReadPosRankSum=0.815;SOR=0.545 GT:AD:DP:GQ:PL 1/1:1,184:185:99:4896,349,0
CP000253.1 915393 . G A 2131.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6841;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2160,153,0
CP000253.1 915591 . A G 3491.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.915;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3364;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.59;ReadPosRankSum=1.712;SOR=0.430 GT:AD:DP:GQ:PL 1/1:1,141:142:99:3520,250,0
CP000253.1 915606 . G A 3647.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2617;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3676,259,0
CP000253.1 915681 . A G 5007.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,208:208:99:5036,352,0
CP000253.1 915773 . G A 5712.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4361;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,244:245:99:5741,397,0
CP000253.1 915789 . A C 5070.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.2610;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.54;ReadPosRankSum=1.471;SOR=0.230 GT:AD:DP:GQ:PL 1/1:1,224:226:99:5099,349,0
CP000253.1 916130 . T C 1177.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0981;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1206,84,0
CP000253.1 916184 . G T 1402.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.975;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8069;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.78;ReadPosRankSum=1.030;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,58:59:99:1431,99,0
CP000253.1 916561 . C T 297.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.78;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:24:326,24,0
CP000253.1 916564 . C T 259.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.87;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:21:288,21,0
CP000253.1 916565 . C G 244.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.20;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:21:273,21,0
CP000253.1 916567 . A G 257.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.64;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:21:286,21,0
CP000253.1 916570 . T A 256.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.53;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:21:285,21,0
CP000253.1 916585 . T C 269.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:298,21,0
CP000253.1 916717 . A G 850.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:63:879,63,0
CP000253.1 916780 . G A 1235.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.464;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6500;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.32;ReadPosRankSum=1.473;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,52:53:65:1264,65,0
CP000253.1 916828 . C T 1401.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:59:99:1430,102,0
CP000253.1 917008 . A G 2124.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2153,150,0
CP000253.1 917032 . A G 1933.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2865;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:83:99:1962,138,0
CP000253.1 917101 . G A 1615.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0197;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1644,114,0
CP000253.1 917458 . C T 3396.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8335;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3425,238,0
CP000253.1 917620 . A G 2536.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9244;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=1.029 GT:AD:DP:GQ:PL 1/1:0,101:103:99:2565,181,0
CP000253.1 917641 . T C 1916.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8911;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:80:99:1945,138,0
CP000253.1 920498 . C T 5512.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.576;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.4714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.61;ReadPosRankSum=-0.586;SOR=0.711 GT:AD:DP:GQ:PL 1/1:2,222:228:99:5541,363,0
CP000253.1 920570 . A T 5704.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.997;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.0025;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.48;ReadPosRankSum=-1.544;SOR=0.890 GT:AD:DP:GQ:PL 1/1:2,231:234:99:5733,368,0
CP000253.1 920601 . A G 5364.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.516;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=-0.920;SOR=0.188 GT:AD:DP:GQ:PL 1/1:2,213:217:99:5393,385,0
CP000253.1 920690 . T C 5169.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8625;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.79;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,193:193:99:5198,373,0
CP000253.1 920717 . T A 4611.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4640,331,0
CP000253.1 920738 . T C 4460.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4489,316,0
CP000253.1 920830 . T C 3267.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5247;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3296,232,0
CP000253.1 920899 . T C 2118.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.026;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=84.1164;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=1.527;SOR=0.495 GT:AD:DP:GQ:PL 1/1:1,83:84:99:2147,151,0
CP000253.1 920928 . G T 2113.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2142,150,0
CP000253.1 920957 . T G 2046.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.740;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6297;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.96;ReadPosRankSum=1.712;SOR=0.502 GT:AD:DP:GQ:PL 1/1:1,81:82:99:2075,147,0
CP000253.1 920959 . C A 2050.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2079,147,0
CP000253.1 921194 . T C 2495.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.414;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.48;ReadPosRankSum=-1.730;SOR=0.711 GT:AD:DP:GQ:PL 1/1:2,109:112:99:2524,136,0
CP000253.1 921218 . A G 2277.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.819;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.48;ReadPosRankSum=-1.287;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,96:97:99:2306,160,0
CP000253.1 921350 . T A 605.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:25:45:634,45,0
CP000253.1 922317 . G A 121.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:149,12,0
CP000253.1 922976 . G C 4214.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.832;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.8766;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.09;ReadPosRankSum=0.804;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,167:173:99:4243,301,0
CP000253.1 923024 . T G 4369.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0583;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,177:178:99:4398,310,0
CP000253.1 923223 . T C 3039.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2846;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3068,217,0
CP000253.1 923883 . C A 1868.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1897,132,0
CP000253.1 923952 . G A 1338.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1367,93,0
CP000253.1 924042 . T C 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 924048 . G T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 924205 . T A 222.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.26;ReadPosRankSum=1.747;SOR=0.793 GT:AD:DP:GQ:PL 1/1:1,10:11:18:251,18,0
CP000253.1 924609 . A C 3552.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.606;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.84;ReadPosRankSum=-1.325;SOR=1.147 GT:AD:DP:GQ:PL 1/1:2,141:144:99:3581,253,0
CP000253.1 924639 . A T 2551.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.956 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2580,181,0
CP000253.1 924798 . T A 558.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:42:587,42,0
CP000253.1 924859 . A C 307.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:24:336,24,0
CP000253.1 924881 . T A 269.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:21:298,21,0
CP000253.1 924888 . A G 172.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.61;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:201,15,0
CP000253.1 924932 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 924970 . A G 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 924987 . A T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 925214 . A G 5169.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2539;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,215:216:99:5198,361,0
CP000253.1 925729 . A G 612.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:45:641,45,0
CP000253.1 925805 . T C 1465.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1494,102,0
CP000253.1 925991 . A C 1372.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.50;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:96:1401,96,0
CP000253.1 927043 . A C 4355.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.801;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.93;ReadPosRankSum=-0.807;SOR=1.256 GT:AD:DP:GQ:PL 1/1:2,166:169:99:4384,310,0
CP000253.1 927305 . G A 6144.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.899;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.7444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.68;ReadPosRankSum=1.664;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6173,439,0
CP000253.1 928160 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 929962 . T C 1186.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1215,87,0
CP000253.1 930854 . A C 1348.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.70;SOR=1.514 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1377,102,0
CP000253.1 931742 . C T 304.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:333,24,0
CP000253.1 933941 . T C 3478.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.082 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3507,247,0
CP000253.1 933972 . C T 1745.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1774,123,0
CP000253.1 934025 . C T 944.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.736;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.62;ReadPosRankSum=-0.044;SOR=0.633 GT:AD:DP:GQ:PL 1/1:1,39:40:69:973,69,0
CP000253.1 934040 . C T 932.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4715;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:41:69:961,69,0
CP000253.1 935150 . T C 2831.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,124:125:99:2860,199,0
CP000253.1 936683 . A G 2204.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2233,154,0
CP000253.1 936821 . G A 222.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:251,18,0
CP000253.1 936893 . C T 224.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:10:18:253,18,0
CP000253.1 936894 . G C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 937049 . G A 2437.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5187;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2466,172,0
CP000253.1 937681 . A G 1428.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1457,102,0
CP000253.1 937885 . A G 2052.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.31;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2081,141,0
CP000253.1 937951 . C G 2672.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2701,187,0
CP000253.1 938347 . A G 441.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:470,33,0
CP000253.1 938426 . A G 126.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:154,12,0
CP000253.1 939116 . T A 266.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:295,21,0
CP000253.1 939563 . T G 88.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:116,9,0
CP000253.1 940170 . T A 1971.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6690;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2000,141,0
CP000253.1 940285 . T G 1382.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.787;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9993;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.44;ReadPosRankSum=0.631;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,58:59:99:1411,99,0
CP000253.1 940452 . C T 769.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:57:798,57,0
CP000253.1 940794 . T A 2792.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2821,196,0
CP000253.1 940809 . G A 2660.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=1.008 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2689,187,0
CP000253.1 940818 . G T 2578.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.157 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2607,184,0
CP000253.1 941798 . G A 235.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:12:18:264,18,0
CP000253.1 941923 . T C 227.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:256,18,0
CP000253.1 941944 . A G 271.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:300,21,0
CP000253.1 941953 . A T 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 942006 . A C 270.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:299,21,0
CP000253.1 942034 . A T 311.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:340,24,0
CP000253.1 942039 . T A 313.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:342,24,0
CP000253.1 942056 . G A 267.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:296,21,0
CP000253.1 942067 . C T 267.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:296,21,0
CP000253.1 942092 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 942099 . G A 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 942112 . A G 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 942116 . G T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 942117 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 942156 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 942171 . A G 451.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:480,33,0
CP000253.1 942215 . G A 590.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:619,42,0
CP000253.1 942744 . C A 369.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:398,27,0
CP000253.1 942806 . C T 365.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.52;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:394,27,0
CP000253.1 942815 . C G 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 942831 . A G 357.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.05;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:386,27,0
CP000253.1 942844 . A G 402.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:431,30,0
CP000253.1 942851 . A G 278.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.45;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:307,21,0
CP000253.1 942860 . T C 280.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.06;ReadPosRankSum=1.746;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,13:14:21:309,21,0
CP000253.1 942913 . C T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 942939 . T A 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 943109 . T C 942.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.92;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:44:66:971,66,0
CP000253.1 943136 . G T 987.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.95;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:69:1016,69,0
CP000253.1 943253 . G C 678.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:707,48,0
CP000253.1 943364 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 943501 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 943606 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 943626 . T C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 943663 . G T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 943686 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 943823 . T A 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 943830 . A G 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 943837 . T G 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 943944 . C T 101.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:129,9,0
CP000253.1 943959 . G A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 943991 . C G 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 944151 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 944237 . A G 136.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:164,12,0
CP000253.1 944286 . A G 227.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:256,18,0
CP000253.1 944355 . A G 1382.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:62:96:1411,96,0
CP000253.1 944380 . G C 1537.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8055;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1566,108,0
CP000253.1 944469 . C T 1738.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1767,120,0
CP000253.1 944714 . G A 584.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:613,42,0
CP000253.1 944886 . G T 603.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.82;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:30:45:632,45,0
CP000253.1 945145 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 945186 . C G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 945199 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 945332 . A C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 945333 . T G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 945592 . C T 627.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:656,45,0
CP000253.1 945654 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 945772 . A G 187.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.88;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:10:15:216,15,0
CP000253.1 945775 . A G 224.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:253,18,0
CP000253.1 945947 . A T 261.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:290,21,0
CP000253.1 946143 . G A 2999.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.06;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3028,205,0
CP000253.1 946237 . A T 1905.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4308;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:83:99:1934,132,0
CP000253.1 946330 . C A 615.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:45:644,45,0
CP000253.1 946361 . C T 441.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:33:470,33,0
CP000253.1 948738 . A T 144.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:172,12,0
CP000253.1 948770 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 949416 . C T 324.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:353,24,0
CP000253.1 949447 . G A 275.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.22;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:304,21,0
CP000253.1 949467 . T C 224.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:253,18,0
CP000253.1 949480 . T G 223.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:252,18,0
CP000253.1 949516 . T A 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 949542 . C A 138.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:166,12,0
CP000253.1 949552 . C T 135.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.01;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:163,12,0
CP000253.1 949555 . T A 133.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:161,12,0
CP000253.1 949585 . A G 139.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:167,12,0
CP000253.1 949586 . T C 137.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:165,12,0
CP000253.1 949588 . T G 114.85 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=16.41;ReadPosRankSum=0.792;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,6:7:17:143,0,17
CP000253.1 949589 . A T 143.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:171,12,0
CP000253.1 949596 . C T 260.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:289,21,0
CP000253.1 949618 . G A 316.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.077;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.12;ReadPosRankSum=1.755;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,14:15:24:345,24,0
CP000253.1 949641 . C T 445.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.23;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:474,33,0
CP000253.1 949652 . C T 570.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:599,42,0
CP000253.1 949661 . T C 666.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:695,48,0
CP000253.1 951476 . A G 1331.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:61:93:1360,93,0
CP000253.1 951754 . T A 626.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:655,45,0
CP000253.1 952501 . G A 1464.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1493,105,0
CP000253.1 953245 . C T 477.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:506,36,0
CP000253.1 953428 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 953665 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 953981 . A C 1536.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1565,108,0
CP000253.1 954028 . A G 1902.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9070;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1931,135,0
CP000253.1 954043 . G A 1877.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1906,135,0
CP000253.1 954061 . G A 1951.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1980,138,0
CP000253.1 954079 . A G 2248.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4715;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2277,160,0
CP000253.1 954103 . C T 2811.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=1.199 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2840,202,0
CP000253.1 954332 . G A 3347.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1067;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,136:137:99:3376,241,0
CP000253.1 954449 . G A 2542.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4786;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=1.109 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2571,184,0
CP000253.1 954569 . T A 1566.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.999;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8256;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.56;ReadPosRankSum=0.029;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,58:59:99:1595,114,0
CP000253.1 954711 . G A 1186.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9989;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1215,84,0
CP000253.1 954722 . C T 1271.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:90:1300,90,0
CP000253.1 955139 . A G 3945.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.68;ReadPosRankSum=0.239;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,173:176:99:3974,274,0
CP000253.1 955211 . G T 4282.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.832;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3016;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.66;ReadPosRankSum=-0.733;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,188:189:99:4311,295,0
CP000253.1 955244 . G A 3543.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2865;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3572,247,0
CP000253.1 955259 . G A 3446.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,149:151:99:3475,241,0
CP000253.1 955280 . A C 3025.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.742;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.58;ReadPosRankSum=-0.698;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,133:134:99:3054,217,0
CP000253.1 955281 . G A 3076.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.763;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.96;ReadPosRankSum=-0.349;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,133:134:99:3105,217,0
CP000253.1 955283 . T C 3050.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3079,214,0
CP000253.1 955586 . A G 392.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:30:421,30,0
CP000253.1 955907 . C T 735.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:54:764,54,0
CP000253.1 955946 . T A 706.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:735,51,0
CP000253.1 955947 . T C 695.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:724,51,0
CP000253.1 955986 . T A 866.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:36:63:895,63,0
CP000253.1 955995 . A T 840.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:60:869,60,0
CP000253.1 956010 . C T 914.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:66:943,66,0
CP000253.1 956020 . C T 869.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:36:63:898,63,0
CP000253.1 956034 . A T 845.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:874,60,0
CP000253.1 956039 . T A 833.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:862,60,0
CP000253.1 956048 . A T 835.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:864,60,0
CP000253.1 956051 . A G 891.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:63:920,63,0
CP000253.1 956444 . A T 1864.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.059;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.31;ReadPosRankSum=1.430;SOR=0.426 GT:AD:DP:GQ:PL 1/1:1,79:80:99:1893,129,0
CP000253.1 956469 . T G 1718.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1747,120,0
CP000253.1 957181 . G A 5107.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.933;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3566;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.44;ReadPosRankSum=1.069;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,208:209:99:5136,361,0
CP000253.1 957238 . T C 4925.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.959;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.13;ReadPosRankSum=-0.115;SOR=0.579 GT:AD:DP:GQ:PL 1/1:1,195:197:99:4954,349,0
CP000253.1 957286 . T C 4050.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9050;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,160:164:99:4079,289,0
CP000253.1 957313 . G T 3148.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.347;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.04;ReadPosRankSum=-0.404;SOR=1.068 GT:AD:DP:GQ:PL 1/1:2,129:132:99:3177,226,0
CP000253.1 957373 . G T 2363.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2392,172,0
CP000253.1 957631 . G A 298.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:327,24,0
CP000253.1 957633 . C A 304.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:333,24,0
CP000253.1 957663 . A G 281.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.68;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:310,24,0
CP000253.1 957672 . A T 268.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:21:297,21,0
CP000253.1 957813 . T G 517.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.25;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:39:546,39,0
CP000253.1 957889 . A G 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 958312 . C G 5195.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0082;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,229:231:99:5224,361,0
CP000253.1 958330 . G A 5400.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.800;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.41;ReadPosRankSum=-1.553;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,240:241:99:5429,373,0
CP000253.1 958363 . G A 5695.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6674;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,248:249:99:5724,394,0
CP000253.1 958488 . C A 4244.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.900;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.97;ReadPosRankSum=0.673;SOR=0.514 GT:AD:DP:GQ:PL 1/1:1,169:170:99:4273,301,0
CP000253.1 958489 . A G 4298.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0575;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4327,307,0
CP000253.1 958597 . G A 2282.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2311,160,0
CP000253.1 958795 . A T 1306.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,54:54:96:1335,96,0
CP000253.1 958981 . A G 405.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.98;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:15:33:434,33,0
CP000253.1 959321 . C T 164.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:193,15,0
CP000253.1 959366 . A G 345.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:27:374,27,0
CP000253.1 959392 . T A 261.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8302;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:290,21,0
CP000253.1 959404 . C G 276.77 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;QD=30.75;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:10:21:291,21,0
CP000253.1 959419 . A T 260.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=60.8900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:289,21,0
CP000253.1 959422 . T A 297.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.7943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.78;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:24:326,24,0
CP000253.1 959425 . A G 299.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.98;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:24:328,24,0
CP000253.1 959428 . T A 261.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:290,21,0
CP000253.1 959431 . A G 337.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.71;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:27:366,27,0
CP000253.1 959719 . A G 5425.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,220:222:99:5454,379,0
CP000253.1 960211 . T C 3044.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=1.238 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3073,220,0
CP000253.1 960270 . G T 1752.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.97;SOR=1.249 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1781,126,0
CP000253.1 960328 . C T 854.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:63:883,63,0
CP000253.1 960334 . A T 778.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8401;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:57:807,57,0
CP000253.1 960550 . G T 108.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:136,12,0
CP000253.1 960591 . A G 55.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.842;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=11.15;ReadPosRankSum=-1.282;SOR=0.693 GT:AD:DP:GQ:PL 1/1:1,4:5:6:83,6,0
CP000253.1 961318 . A C 1485.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.105;DP=64;Dels=0.00;ExcessHet=3.0103;FS=3.080;HaplotypeScore=10.7459;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.22;ReadPosRankSum=0.599;SOR=0.219 GT:AD:DP:GQ:PL 1/1:2,62:64:98:1514,98,0
CP000253.1 961371 . T C 1538.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1567,108,0
CP000253.1 961529 . A T 335.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:364,27,0
CP000253.1 961671 . A G 2002.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4589;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:82:99:2031,141,0
CP000253.1 962183 . G C 91.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:119,9,0
CP000253.1 962296 . G C 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 962711 . C T 142.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:8:12:170,12,0
CP000253.1 962805 . A G 147.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:12:175,12,0
CP000253.1 962844 . T C 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 963045 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 963082 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 963462 . A T 1163.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=1.251 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1192,84,0
CP000253.1 963685 . G T 4568.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,190:191:99:4597,322,0
CP000253.1 963918 . G A 4781.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.8057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,184:184:99:4810,346,0
CP000253.1 964705 . T G 1516.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1545,108,0
CP000253.1 965289 . A G 2553.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2582,181,0
CP000253.1 966068 . G A 2289.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6080;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2318,163,0
CP000253.1 966217 . A G 2115.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2144,150,0
CP000253.1 966273 . G A 2101.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.910;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.16;ReadPosRankSum=-0.957;SOR=0.371 GT:AD:DP:GQ:PL 1/1:1,86:87:99:2130,150,0
CP000253.1 966472 . T A 2161.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.779;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0364;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=-1.418;SOR=0.319 GT:AD:DP:GQ:PL 1/1:1,87:89:99:2190,154,0
CP000253.1 966529 . A T 2075.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2104,147,0
CP000253.1 966602 . G A 1598.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.467;DP=67;Dels=0.00;ExcessHet=3.0103;FS=3.216;HaplotypeScore=7.2486;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.86;ReadPosRankSum=1.708;SOR=0.516 GT:AD:DP:GQ:PL 1/1:1,66:67:92:1627,92,0
CP000253.1 966724 . A C 1554.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1583,111,0
CP000253.1 967176 . A G 1766.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1795,129,0
CP000253.1 967347 . T C 1982.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7020;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:79:99:2011,144,0
CP000253.1 967413 . T G 2501.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7250;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2530,184,0
CP000253.1 967741 . G A 678.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.820;DP=33;Dels=0.00;ExcessHet=3.0103;FS=3.424;HaplotypeScore=7.1253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.57;ReadPosRankSum=-1.314;SOR=0.618 GT:AD:DP:GQ:PL 1/1:1,32:33:24:707,24,0
CP000253.1 968643 . G C 143.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:171,12,0
CP000253.1 968644 . T A 143.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:171,12,0
CP000253.1 968645 . T C 143.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:171,12,0
CP000253.1 968646 . G A 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 968647 . T A 143.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.465;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.43;ReadPosRankSum=-0.792;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,6:7:12:171,12,0
CP000253.1 968806 . A T 2716.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5463;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2745,190,0
CP000253.1 968839 . A T 3212.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.141;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.95;ReadPosRankSum=0.520;SOR=0.292 GT:AD:DP:GQ:PL 1/1:1,139:140:99:3241,223,0
CP000253.1 969268 . G A 702.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:731,51,0
CP000253.1 969328 . C T 709.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:738,51,0
CP000253.1 969391 . T C 480.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:509,36,0
CP000253.1 969408 . T C 362.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:391,27,0
CP000253.1 969669 . A G 1923.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.725;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=-1.509;SOR=0.350 GT:AD:DP:GQ:PL 1/1:1,76:77:99:1952,138,0
CP000253.1 971531 . A T 217.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:11:18:246,18,0
CP000253.1 971835 . A C 526.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.159;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.95;ReadPosRankSum=-1.014;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,23:24:39:555,39,0
CP000253.1 972134 . C T 145.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:173,12,0
CP000253.1 972323 . T C 145.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.424;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.64;MQ0=0;MQRankSum=-0.949;QD=7.67;ReadPosRankSum=-2.295;SOR=0.551 GT:AD:DP:GQ:PL 0/1:10,9:19:99:174,0,215
CP000253.1 972329 . C T 142.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.545;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9995;MLEAC=1;MLEAF=0.500;MQ=58.71;MQ0=0;MQRankSum=-1.005;QD=7.14;ReadPosRankSum=-1.757;SOR=0.446 GT:AD:DP:GQ:PL 0/1:11,9:20:99:171,0,264
CP000253.1 972332 . T A 142.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.376;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8316;MLEAC=1;MLEAF=0.500;MQ=58.71;MQ0=0;MQRankSum=-1.005;QD=7.14;ReadPosRankSum=-1.757;SOR=0.446 GT:AD:DP:GQ:PL 0/1:11,9:20:99:171,0,262
CP000253.1 972344 . A G 142.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.573;DP=19;Dels=0.00;ExcessHet=3.0103;FS=1.871;HaplotypeScore=0.8321;MLEAC=1;MLEAF=0.500;MQ=58.64;MQ0=0;MQRankSum=-0.949;QD=7.51;ReadPosRankSum=-1.515;SOR=0.307 GT:AD:DP:GQ:PL 0/1:10,9:19:99:171,0,260
CP000253.1 972345 . C A 142.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.852;DP=19;Dels=0.00;ExcessHet=3.0103;FS=1.871;HaplotypeScore=0.8321;MLEAC=1;MLEAF=0.500;MQ=58.64;MQ0=0;MQRankSum=-0.949;QD=7.51;ReadPosRankSum=-1.515;SOR=0.307 GT:AD:DP:GQ:PL 0/1:10,9:19:99:171,0,260
CP000253.1 972368 . G T 28.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.506;DP=12;Dels=0.00;ExcessHet=3.0103;FS=2.881;HaplotypeScore=2.7329;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=2.40;ReadPosRankSum=0.544;SOR=1.721 GT:AD:DP:GQ:PL 0/1:10,2:12:57:57,0,232
CP000253.1 972369 . G A 73.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.248;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7329;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.15;ReadPosRankSum=-1.009;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,4:12:99:102,0,186
CP000253.1 972384 . C G 182.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.988;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8335;MLEAC=1;MLEAF=0.500;MQ=58.80;MQ0=0;MQRankSum=-0.783;QD=10.15;ReadPosRankSum=-1.296;SOR=0.627 GT:AD:DP:GQ:PL 0/1:8,10:18:99:211,0,212
CP000253.1 972385 . G A 56.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.664;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8335;MLEAC=1;MLEAF=0.500;MQ=58.80;MQ0=0;MQRankSum=-1.737;QD=3.15;ReadPosRankSum=0.801;SOR=1.230 GT:AD:DP:GQ:PL 0/1:14,4:18:85:85,0,341
CP000253.1 972386 . T C 66.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.766;DP=20;Dels=0.00;ExcessHet=3.0103;FS=1.922;HaplotypeScore=12.8242;MLEAC=1;MLEAF=0.500;MQ=58.87;MQ0=0;MQRankSum=1.029;QD=3.34;ReadPosRankSum=-0.292;SOR=0.307 GT:AD:DP:GQ:PL 0/1:14,6:20:95:95,0,376
CP000253.1 972395 . T A 232.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.599;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6851;MLEAC=1;MLEAF=0.500;MQ=58.87;MQ0=0;MQRankSum=-1.111;QD=11.64;ReadPosRankSum=-0.116;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,12:20:99:261,0,210
CP000253.1 972399 . G A 239.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.197;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=1;MLEAF=0.500;MQ=58.74;MQ0=0;MQRankSum=-0.943;QD=13.32;ReadPosRankSum=-1.270;SOR=0.495 GT:AD:DP:GQ:PL 0/1:6,12:18:99:268,0,131
CP000253.1 972420 . T C 104.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8550;MLEAC=1;MLEAF=0.500;MQ=58.74;MQ0=0;MQRankSum=-1.972;QD=5.82;ReadPosRankSum=-0.235;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,6:18:99:133,0,267
CP000253.1 972421 . G T 104.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.650;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8550;MLEAC=1;MLEAF=0.500;MQ=58.74;MQ0=0;MQRankSum=-1.972;QD=5.82;ReadPosRankSum=-0.235;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,6:18:99:133,0,267
CP000253.1 972428 . G T 72.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.352;DP=18;Dels=0.00;ExcessHet=3.0103;FS=2.029;HaplotypeScore=5.9975;MLEAC=1;MLEAF=0.500;MQ=58.74;MQ0=0;MQRankSum=1.115;QD=4.04;ReadPosRankSum=-0.611;SOR=0.269 GT:AD:DP:GQ:PL 0/1:12,6:18:99:101,0,303
CP000253.1 973544 . T A 5113.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.7247;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,206:208:99:5142,367,0
CP000253.1 973871 . A G 2673.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.895;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7763;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.74;ReadPosRankSum=1.196;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,99:100:99:2702,161,0
CP000253.1 976108 . A G 5591.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7978;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,214:214:99:5620,400,0
CP000253.1 976870 . G C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 976891 . T C 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 976897 . T A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 977044 . G A 318.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:347,24,0
CP000253.1 977067 . A G 366.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.58;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:395,27,0
CP000253.1 977120 . G A 419.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:448,30,0
CP000253.1 977122 . A G 463.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:33:492,33,0
CP000253.1 977790 . G T 93.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.201;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2493;MLEAC=1;MLEAF=0.500;MQ=58.30;MQ0=0;MQRankSum=1.151;QD=2.60;ReadPosRankSum=4.923;SOR=0.569 GT:AD:DP:GQ:PL 0/1:28,8:36:99:122,0,589
CP000253.1 977861 . T G 837.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=58.35;MQ0=0;QD=22.64;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:60:866,60,0
CP000253.1 977867 . G T 882.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=58.44;MQ0=0;QD=22.64;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:63:911,63,0
CP000253.1 977937 . T A 1392.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5927;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1421,99,0
CP000253.1 978019 . A G 1737.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.192;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4715;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.14;ReadPosRankSum=0.772;SOR=0.811 GT:AD:DP:GQ:PL 1/1:2,70:72:88:1766,88,0
CP000253.1 978074 . C G 2113.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.087;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2124;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.49;ReadPosRankSum=-1.141;SOR=0.782 GT:AD:DP:GQ:PL 1/1:2,92:94:99:2142,109,0
CP000253.1 978123 . T A 816.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.574;DP=249;Dels=0.00;ExcessHet=3.0103;FS=1.128;HaplotypeScore=19.2008;MLEAC=1;MLEAF=0.500;MQ=46.94;MQ0=4;MQRankSum=-10.956;QD=3.35;ReadPosRankSum=-10.707;SOR=0.611 GT:AD:DP:GQ:PL 0/1:178,66:249:99:845,0,4859
CP000253.1 978154 . G A 3040.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.751;DP=250;Dels=0.00;ExcessHet=3.0103;FS=2.954;HaplotypeScore=30.6744;MLEAC=1;MLEAF=0.500;MQ=47.21;MQ0=4;MQRankSum=2.033;QD=12.26;ReadPosRankSum=4.743;SOR=0.929 GT:AD:DP:GQ:PL 0/1:120,128:250:99:3069,0,2563
CP000253.1 978189 . A C 4044.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.680;DP=247;Dels=0.00;ExcessHet=3.0103;FS=2.491;HaplotypeScore=20.7306;MLEAC=1;MLEAF=0.500;MQ=47.89;MQ0=3;MQRankSum=-8.544;QD=16.38;ReadPosRankSum=3.793;SOR=0.914 GT:AD:DP:GQ:PL 0/1:66,181:247:99:4073,0,1551
CP000253.1 978215 . T A 690.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.895;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7437;MLEAC=1;MLEAF=0.500;MQ=48.54;MQ0=3;MQRankSum=-11.242;QD=2.77;ReadPosRankSum=1.261;SOR=0.638 GT:AD:DP:GQ:PL 0/1:188,61:250:99:719,0,4848
CP000253.1 978234 . A T 697.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.401;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6603;MLEAC=1;MLEAF=0.500;MQ=49.35;MQ0=3;MQRankSum=-11.077;QD=2.86;ReadPosRankSum=1.447;SOR=0.723 GT:AD:DP:GQ:PL 0/1:181,63:244:99:726,0,4749
CP000253.1 978485 . C T 3683.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3712,259,0
CP000253.1 978649 . C G 3630.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6217;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3659,256,0
CP000253.1 978759 . A T 1856.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9378;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1885,129,0
CP000253.1 979204 . T C 623.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.12;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:48:652,48,0
CP000253.1 979570 . A T 2324.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0940;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,93:94:99:2353,169,0
CP000253.1 980111 . T C 2251.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2280,157,0
CP000253.1 980549 . T G 1612.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1641,114,0
CP000253.1 980594 . A T 2017.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2046,144,0
CP000253.1 980717 . A T 2848.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.35;ReadPosRankSum=1.619;SOR=0.230 GT:AD:DP:GQ:PL 1/1:1,121:122:99:2877,202,0
CP000253.1 980747 . T C 3067.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3096,217,0
CP000253.1 980815 . A G 2958.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.883;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.76;ReadPosRankSum=-1.414;SOR=0.242 GT:AD:DP:GQ:PL 1/1:1,129:131:99:2987,208,0
CP000253.1 982113 . G A 2608.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,106:108:99:2637,187,0
CP000253.1 982277 . A G 686.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,26:26:51:715,51,0
CP000253.1 982767 . C G 2271.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2300,163,0
CP000253.1 982782 . G T 2148.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2177,156,0
CP000253.1 982785 . T A 2125.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7013;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2154,151,0
CP000253.1 982923 . C T 2089.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.2566;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2118,150,0
CP000253.1 983010 . T G 2671.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4054;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=1.008 GT:AD:DP:GQ:PL 1/1:0,107:108:99:2700,190,0
CP000253.1 983540 . C A 2078.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7457;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=26.31;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2107,150,0
CP000253.1 983640 . C T 1750.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.79;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1779,129,0
CP000253.1 984147 . T A 3080.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3109,220,0
CP000253.1 984549 . G A 1219.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.468;DP=53;Dels=0.00;ExcessHet=3.0103;FS=3.096;HaplotypeScore=6.1982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.01;ReadPosRankSum=1.734;SOR=0.467 GT:AD:DP:GQ:PL 1/1:1,52:53:56:1248,56,0
CP000253.1 984645 . G A 739.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.789;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0183;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.86;ReadPosRankSum=0.000;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,30:31:54:768,54,0
CP000253.1 984914 . A C 4508.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=1.141 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4537,319,0
CP000253.1 985127 . T A 6957.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.951;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.9605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.83;ReadPosRankSum=1.338;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6986,506,0
CP000253.1 985187 . G A 6723.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.1639;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.22;SOR=1.037 GT:AD:DP:GQ:PL 1/1:0,247:249:99:6752,488,0
CP000253.1 985235 . T A 6715.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.903;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.97;ReadPosRankSum=-1.134;SOR=0.857 GT:AD:DP:GQ:PL 1/1:1,248:249:99:6744,485,0
CP000253.1 985313 . G T 6491.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1179;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6520,464,0
CP000253.1 985892 . T C 5919.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.705;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.9715;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.77;ReadPosRankSum=-1.182;SOR=0.331 GT:AD:DP:GQ:PL 1/1:1,238:242:99:5948,427,0
CP000253.1 985904 . C T 6123.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,243:243:99:6152,436,0
CP000253.1 986126 . G A 3819.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.987;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.30;ReadPosRankSum=0.184;SOR=0.234 GT:AD:DP:GQ:PL 1/1:1,150:151:99:3848,271,0
CP000253.1 986421 . T G 4772.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5692;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,197:197:99:4801,337,0
CP000253.1 986451 . C T 4539.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4568,322,0
CP000253.1 986496 . A G 3900.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.807;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5010;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.33;ReadPosRankSum=-1.445;SOR=0.719 GT:AD:DP:GQ:PL 1/1:2,152:154:99:3929,277,0
CP000253.1 986514 . T C 3509.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,134:136:99:3538,253,0
CP000253.1 986523 . C T 3615.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7010;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3644,262,0
CP000253.1 986577 . T C 2828.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1559;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2857,205,0
CP000253.1 986643 . C T 2561.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.710;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.69;ReadPosRankSum=-1.462;SOR=0.392 GT:AD:DP:GQ:PL 1/1:1,95:100:99:2590,190,0
CP000253.1 986658 . T C 2602.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7403;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2631,190,0
CP000253.1 986736 . G A 2659.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6081;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2688,196,0
CP000253.1 986841 . C A 2680.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8231;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2709,193,0
CP000253.1 986892 . G A 2630.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.57;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2659,193,0
CP000253.1 987012 . A G 3212.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2786;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3241,235,0
CP000253.1 987081 . T C 4293.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2242;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,167:168:99:4322,307,0
CP000253.1 987122 . T C 4983.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.651;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2711;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.43;ReadPosRankSum=0.603;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,203:205:99:5012,355,0
CP000253.1 987165 . C T 5187.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1514;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,215:218:99:5216,364,0
CP000253.1 987462 . G A 982.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1011,72,0
CP000253.1 987486 . C T 1250.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:90:1279,90,0
CP000253.1 987518 . C T 1389.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1418,99,0
CP000253.1 987654 . A T 1606.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1635,114,0
CP000253.1 987690 . A C 1236.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.325;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2222;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.09;ReadPosRankSum=1.490;SOR=0.280 GT:AD:DP:GQ:PL 1/1:1,55:57:63:1265,63,0
CP000253.1 987901 . A T 974.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1003,72,0
CP000253.1 988258 . A T 3194.83 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3223,226,0
CP000253.1 988465 . C T 2879.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7069;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,120:121:99:2908,205,0
CP000253.1 988559 . A G 2373.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4831;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2402,169,0
CP000253.1 988612 . A T 2100.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2129,150,0
CP000253.1 988936 . A T 1451.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1480,102,0
CP000253.1 989391 . T A 2444.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2473,175,0
CP000253.1 989459 . G A 2152.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2181,154,0
CP000253.1 989469 . C G 2060.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:79:99:2089,153,0
CP000253.1 989490 . G A 1908.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7876;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.51;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1937,138,0
CP000253.1 989642 . G A 1215.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1244,87,0
CP000253.1 990479 . A G 1923.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.00;SOR=1.209 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1952,138,0
CP000253.1 990490 . A T 1895.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2851;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=1.340 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1924,138,0
CP000253.1 990560 . A T 525.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:39:554,39,0
CP000253.1 990588 . C G 522.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:551,39,0
CP000253.1 990589 . G A 531.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:560,39,0
CP000253.1 990605 . A T 654.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:29:48:683,48,0
CP000253.1 991066 . G T 1562.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.472;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2172;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.04;ReadPosRankSum=-2.225;SOR=0.933 GT:AD:DP:GQ:PL 1/1:2,63:66:91:1591,91,0
CP000253.1 991088 . C T 1694.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.121;DP=74;Dels=0.00;ExcessHet=3.0103;FS=2.347;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.90;ReadPosRankSum=-2.139;SOR=0.735 GT:AD:DP:GQ:PL 1/1:3,71:74:86:1723,86,0
CP000253.1 992481 . C A 4799.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.839;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.24;ReadPosRankSum=1.733;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,197:199:99:4828,337,0
CP000253.1 992720 . A C 3062.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.937;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.50;ReadPosRankSum=-1.677;SOR=0.312 GT:AD:DP:GQ:PL 1/1:1,124:126:99:3091,217,0
CP000253.1 992976 . T C 2130.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2159,150,0
CP000253.1 992983 . C T 2141.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2170,150,0
CP000253.1 993224 . C A 2488.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2517,181,0
CP000253.1 993281 . T A 2663.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.830;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=0.804;SOR=0.491 GT:AD:DP:GQ:PL 1/1:1,109:111:99:2692,193,0
CP000253.1 993332 . A G 3164.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3193,223,0
CP000253.1 993960 . T G 833.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:60:862,60,0
CP000253.1 994053 . A G 2161.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.816;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9275;MLEAC=2;MLEAF=1.00;MQ=59.50;MQ0=0;MQRankSum=-0.204;QD=26.36;ReadPosRankSum=1.057;SOR=1.215 GT:AD:DP:GQ:PL 1/1:1,81:82:99:2190,157,0
CP000253.1 994056 . A G 1835.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.504;DP=103;Dels=0.00;ExcessHet=3.0103;FS=2.317;HaplotypeScore=12.9541;MLEAC=1;MLEAF=0.500;MQ=55.38;MQ0=1;MQRankSum=7.030;QD=17.82;ReadPosRankSum=6.659;SOR=1.112 GT:AD:DP:GQ:PL 0/1:25,78:103:99:1864,0,236
CP000253.1 994059 . A T 1851.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.567;DP=103;Dels=0.00;ExcessHet=3.0103;FS=2.588;HaplotypeScore=11.1660;MLEAC=1;MLEAF=0.500;MQ=55.38;MQ0=1;MQRankSum=7.712;QD=18.15;ReadPosRankSum=6.195;SOR=1.186 GT:AD:DP:GQ:PL 0/1:22,80:103:99:1880,0,171
CP000253.1 994061 . G A 1977.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.740;DP=105;Dels=0.00;ExcessHet=3.0103;FS=2.498;HaplotypeScore=11.9753;MLEAC=1;MLEAF=0.500;MQ=55.26;MQ0=1;MQRankSum=7.520;QD=18.84;ReadPosRankSum=5.991;SOR=1.195 GT:AD:DP:GQ:PL 0/1:22,83:105:99:2006,0,160
CP000253.1 994077 . G A 287.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.159;DP=167;Dels=0.00;ExcessHet=3.0103;FS=8.018;HaplotypeScore=50.9595;MLEAC=1;MLEAF=0.500;MQ=53.61;MQ0=3;MQRankSum=-6.970;QD=1.73;ReadPosRankSum=-4.043;SOR=0.968 GT:AD:DP:GQ:PL 0/1:126,40:167:99:316,0,2447
CP000253.1 994091 . T A 2230.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.237;DP=169;Dels=0.00;ExcessHet=3.0103;FS=11.691;HaplotypeScore=53.1708;MLEAC=1;MLEAF=0.500;MQ=53.69;MQ0=3;MQRankSum=4.431;QD=13.28;ReadPosRankSum=4.737;SOR=0.807 GT:AD:DP:GQ:PL 0/1:52,116:169:99:2259,0,553
CP000253.1 994096 . G T 605.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.058;DP=170;Dels=0.00;ExcessHet=3.0103;FS=10.201;HaplotypeScore=33.9780;MLEAC=1;MLEAF=0.500;MQ=53.62;MQ0=3;MQRankSum=-4.257;QD=3.58;ReadPosRankSum=-3.041;SOR=0.949 GT:AD:DP:GQ:PL 0/1:116,53:170:99:634,0,2117
CP000253.1 994122 . A T 2050.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.663;DP=170;Dels=0.00;ExcessHet=3.0103;FS=10.470;HaplotypeScore=60.0234;MLEAC=1;MLEAF=0.500;MQ=53.62;MQ0=3;MQRankSum=0.902;QD=12.28;ReadPosRankSum=5.151;SOR=0.704 GT:AD:DP:GQ:PL 0/1:51,116:170:99:2079,0,575
CP000253.1 994124 . G A 2100.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.669;DP=168;Dels=0.01;ExcessHet=3.0103;FS=14.567;HaplotypeScore=71.8769;MLEAC=1;MLEAF=0.500;MQ=53.54;MQ0=3;MQRankSum=0.250;QD=12.66;ReadPosRankSum=5.496;SOR=0.715 GT:AD:DP:GQ:PL 0/1:45,121:167:99:2129,0,492
CP000253.1 994125 . G A 3544.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=72.8347;MLEAC=2;MLEAF=1.00;MQ=53.54;MQ0=3;QD=21.23;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,167:167:99:3573,253,0
CP000253.1 994131 . G A 226.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.130;DP=168;Dels=0.00;ExcessHet=3.0103;FS=9.246;HaplotypeScore=84.0635;MLEAC=1;MLEAF=0.500;MQ=53.54;MQ0=3;MQRankSum=0.781;QD=1.36;ReadPosRankSum=-2.051;SOR=1.460 GT:AD:DP:GQ:PL 0/1:136,31:168:99:255,0,2640
CP000253.1 994133 . T C 193.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.869;DP=168;Dels=0.00;ExcessHet=3.0103;FS=7.454;HaplotypeScore=59.3042;MLEAC=1;MLEAF=0.500;MQ=53.54;MQ0=3;MQRankSum=1.332;QD=1.17;ReadPosRankSum=-2.197;SOR=1.373 GT:AD:DP:GQ:PL 0/1:138,27:168:99:222,0,2700
CP000253.1 994140 . G A 12.99 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.827;DP=163;Dels=0.00;ExcessHet=3.0103;FS=6.371;HaplotypeScore=51.4388;MLEAC=1;MLEAF=0.500;MQ=53.33;MQ0=3;MQRankSum=-2.565;QD=0.08;ReadPosRankSum=-1.927;SOR=1.362 GT:AD:DP:GQ:PL 0/1:139,20:163:41:41,0,2543
CP000253.1 994154 . T A 1415.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.448;DP=158;Dels=0.00;ExcessHet=3.0103;FS=22.095;HaplotypeScore=34.1279;MLEAC=1;MLEAF=0.500;MQ=53.32;MQ0=2;MQRankSum=5.605;QD=9.02;ReadPosRankSum=-0.514;SOR=1.136 GT:AD:DP:GQ:PL 0/1:73,84:158:99:1444,0,998
CP000253.1 994159 . T G 1394.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.432;DP=156;Dels=0.00;ExcessHet=3.0103;FS=16.128;HaplotypeScore=26.5690;MLEAC=1;MLEAF=0.500;MQ=53.80;MQ0=2;MQRankSum=4.604;QD=8.94;ReadPosRankSum=-0.429;SOR=1.031 GT:AD:DP:GQ:PL 0/1:73,83:156:99:1423,0,1014
CP000253.1 995617 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 995686 . T C 101.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:129,9,0
CP000253.1 995851 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 996087 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=7.34;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:3:41,3,0
CP000253.1 996343 . C T 598.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:42:627,42,0
CP000253.1 996410 . C G 840.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:60:869,60,0
CP000253.1 996433 . A G 882.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3350;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=22.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:63:911,63,0
CP000253.1 996706 . A C 871.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.815;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1289;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.35;ReadPosRankSum=0.981;SOR=0.556 GT:AD:DP:GQ:PL 1/1:1,38:39:63:900,63,0
CP000253.1 996828 . A G 1578.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5405;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1607,111,0
CP000253.1 996888 . C T 1824.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3244;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1853,126,0
CP000253.1 997093 . G A 743.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:54:772,54,0
CP000253.1 997096 . T C 694.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:51:723,51,0
CP000253.1 997162 . C T 487.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:36:516,36,0
CP000253.1 997198 . C T 272.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:301,21,0
CP000253.1 997291 . A T 315.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:344,24,0
CP000253.1 997470 . C T 436.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:465,33,0
CP000253.1 997674 . T A 363.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:392,27,0
CP000253.1 997683 . T A 353.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:382,27,0
CP000253.1 997686 . T C 358.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:387,27,0
CP000253.1 997689 . T A 401.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:430,30,0
CP000253.1 997793 . A G 443.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:472,33,0
CP000253.1 997809 . T A 432.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:461,33,0
CP000253.1 997812 . A T 472.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:501,36,0
CP000253.1 998417 . C T 1648.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.963;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.25;ReadPosRankSum=1.225;SOR=0.389 GT:AD:DP:GQ:PL 1/1:1,67:68:99:1677,117,0
CP000253.1 999129 . C T 6067.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.0123;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,232:233:99:6096,436,0
CP000253.1 999370 . G A 3866.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.618;DP=155;Dels=0.00;ExcessHet=3.0103;FS=3.643;HaplotypeScore=7.4003;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=1.699;SOR=0.700 GT:AD:DP:GQ:PL 1/1:1,154:155:99:3895,277,0
CP000253.1 999602 . T A 2413.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2442,172,0
CP000253.1 1000160 . A G 395.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:424,30,0
CP000253.1 1000262 . A T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 1000502 . G T 763.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:54:792,54,0
CP000253.1 1001196 . A C 1645.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1674,117,0
CP000253.1 1001451 . A T 4744.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,201:201:99:4773,334,0
CP000253.1 1001469 . A T 4899.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,202:202:99:4928,340,0
CP000253.1 1001574 . C T 4390.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4419,307,0
CP000253.1 1001685 . A G 2995.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3024,217,0
CP000253.1 1001730 . C T 2014.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2043,144,0
CP000253.1 1001799 . C T 1004.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1033,72,0
CP000253.1 1001856 . T C 850.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:60:879,60,0
CP000253.1 1001874 . C A 1095.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1124,78,0
CP000253.1 1002290 . A G 3857.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,170:170:99:3886,268,0
CP000253.1 1002425 . G A 2935.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,124:125:99:2964,205,0
CP000253.1 1002606 . T C 1596.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3339;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:67:99:1625,114,0
CP000253.1 1002755 . G A 1424.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1453,102,0
CP000253.1 1002839 . T C 1594.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6857;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1623,111,0
CP000253.1 1002853 . G C 1535.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1564,108,0
CP000253.1 1003445 . T A 2477.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2506,178,0
CP000253.1 1004005 . A G 12.77 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.43;MQ0=1;QD=6.38;SOR=1.609 GT:AD:DP:GQ:PL 1/1:1,1:2:3:39,3,0
CP000253.1 1004068 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=34.23;MQ0=2;QD=6.27;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:6:90,6,0
CP000253.1 1004103 . A G 49.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.359;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=24.39;MQ0=16;MQRankSum=0.935;QD=1.78;ReadPosRankSum=3.268;SOR=0.307 GT:AD:DP:GQ:PL 0/1:22,6:28:76:78,0,76
CP000253.1 1004146 . C T 20.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.977;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4715;MLEAC=1;MLEAF=0.500;MQ=33.02;MQ0=20;MQRankSum=-1.692;QD=0.43;ReadPosRankSum=1.862;SOR=1.329 GT:AD:DP:GQ:PL 0/1:26,22:49:49:49,0,424
CP000253.1 1005201 . T G 5676.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.710;DP=219;Dels=0.00;ExcessHet=3.0103;FS=4.110;HaplotypeScore=13.4603;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.92;ReadPosRankSum=-0.293;SOR=1.020 GT:AD:DP:GQ:PL 1/1:1,218:219:99:5705,405,0
CP000253.1 1005573 . T C 5574.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=1.216 GT:AD:DP:GQ:PL 1/1:0,214:215:99:5603,400,0
CP000253.1 1006316 . G T 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 1006635 . A C 468.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:497,36,0
CP000253.1 1006639 . G A 518.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.30;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:20:39:547,39,0
CP000253.1 1006692 . T C 1344.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,54:54:96:1373,96,0
CP000253.1 1006706 . T A 1495.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1524,105,0
CP000253.1 1006735 . C T 2325.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2354,163,0
CP000253.1 1007431 . T C 135.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.01;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:163,12,0
CP000253.1 1007726 . T C 1441.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1470,102,0
CP000253.1 1007843 . G A 1837.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1866,126,0
CP000253.1 1008014 . T C 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1008017 . G A 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 1008020 . A G 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1008023 . C T 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1008024 . A G 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1008029 . T A 259.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:288,21,0
CP000253.1 1008182 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1008553 . G A 3896.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3087;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3925,271,0
CP000253.1 1008826 . A G 4543.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,174:177:99:4572,328,0
CP000253.1 1010745 . C T 3449.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2389;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3478,244,0
CP000253.1 1011167 . A T 3831.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5226;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.07;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3860,277,0
CP000253.1 1011448 . C T 4624.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7848;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4653,328,0
CP000253.1 1011451 . T G 4648.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0860;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,183:186:99:4677,331,0
CP000253.1 1011463 . C T 4797.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7171;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4826,340,0
CP000253.1 1011481 . A G 4752.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,190:192:99:4781,340,0
CP000253.1 1011484 . A G 4572.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7877;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.32;ReadPosRankSum=-1.557;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,187:188:99:4601,322,0
CP000253.1 1011499 . A T 4871.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.822;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3235;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.24;ReadPosRankSum=1.405;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,200:202:99:4900,343,0
CP000253.1 1011514 . T A 4569.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,189:190:99:4598,319,0
CP000253.1 1011517 . T G 4642.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6902;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,193:193:99:4671,325,0
CP000253.1 1011622 . T A 4270.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,175:176:99:4299,301,0
CP000253.1 1012199 . A G 4542.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8288;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4571,325,0
CP000253.1 1013433 . T C 1679.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1708,117,0
CP000253.1 1013767 . A T 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 1014710 . C A 355.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:384,27,0
CP000253.1 1015160 . G A 3256.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0412;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=23.43;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3285,226,0
CP000253.1 1015712 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1015728 . C G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1015732 . A G 55.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:83,6,0
CP000253.1 1016894 . A T 1046.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5629;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.27;ReadPosRankSum=0.407;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,46:47:75:1075,75,0
CP000253.1 1017139 . A T 664.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:693,48,0
CP000253.1 1017513 . G A 182.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.32;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:15:211,15,0
CP000253.1 1018427 . T A 617.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:45:646,45,0
CP000253.1 1019324 . C T 2301.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.73;SOR=1.554 GT:AD:DP:GQ:PL 1/1:0,83:84:99:2330,169,0
CP000253.1 1019369 . T C 1119.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.71;SOR=1.552 GT:AD:DP:GQ:PL 1/1:0,39:39:84:1148,84,0
CP000253.1 1019404 . T A 642.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.95;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:48:671,48,0
CP000253.1 1019431 . T C 597.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.47;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:45:626,45,0
CP000253.1 1019735 . G T 549.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:578,39,0
CP000253.1 1019834 . A G 724.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:51:753,51,0
CP000253.1 1019966 . A T 500.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:529,36,0
CP000253.1 1020219 . C T 1413.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.85;SOR=1.755 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1442,105,0
CP000253.1 1020351 . A G 5151.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1201;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,206:207:99:5180,370,0
CP000253.1 1020573 . A G 6168.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.7005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,236:238:99:6197,439,0
CP000253.1 1020576 . T C 6172.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=1.076 GT:AD:DP:GQ:PL 1/1:0,237:238:99:6201,442,0
CP000253.1 1020684 . T C 5458.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7395;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5487,385,0
CP000253.1 1020960 . A T 277.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:306,21,0
CP000253.1 1021489 . C T 206.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:235,18,0
CP000253.1 1021590 . A C 255.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:284,21,0
CP000253.1 1021771 . A T 2427.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6733;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2456,172,0
CP000253.1 1021999 . T C 4768.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1705;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,209:209:99:4797,331,0
CP000253.1 1022004 . T A 4786.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,207:208:99:4815,331,0
CP000253.1 1022055 . C T 4956.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.884;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7276;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.60;ReadPosRankSum=0.503;SOR=0.425 GT:AD:DP:GQ:PL 1/1:1,209:210:99:4985,343,0
CP000253.1 1022128 . C T 3662.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3691,256,0
CP000253.1 1022628 . A G 2664.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,110:111:99:2693,187,0
CP000253.1 1022750 . T C 2313.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2342,163,0
CP000253.1 1022780 . T C 2314.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5954;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2343,163,0
CP000253.1 1022789 . T A 2303.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7685;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2332,163,0
CP000253.1 1023059 . C A 1448.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1477,102,0
CP000253.1 1023119 . T A 1310.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6284;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1339,93,0
CP000253.1 1023159 . C T 1019.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:43:72:1048,72,0
CP000253.1 1023168 . G A 932.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:66:961,66,0
CP000253.1 1023308 . G T 370.78 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.51;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:27:399,27,0
CP000253.1 1023321 . C A 533.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:562,39,0
CP000253.1 1024180 . T A 1331.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:96:1360,96,0
CP000253.1 1024204 . G A 1127.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:81:1156,81,0
CP000253.1 1027558 . C T 214.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:243,18,0
CP000253.1 1027611 . C T 316.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:345,24,0
CP000253.1 1027722 . T C 2090.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8140;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,93:94:99:2119,144,0
CP000253.1 1028166 . T A 786.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:57:815,57,0
CP000253.1 1029563 . T C 4413.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9135;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=24.66;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4442,313,0
CP000253.1 1029919 . G T 2687.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.751;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.89;ReadPosRankSum=0.342;SOR=0.853 GT:AD:DP:GQ:PL 1/1:2,106:108:99:2716,193,0
CP000253.1 1030012 . C T 1662.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1691,120,0
CP000253.1 1030051 . C T 1682.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1711,120,0
CP000253.1 1030621 . T C 4706.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8098;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,186:189:99:4735,343,0
CP000253.1 1030819 . A T 4296.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.72;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:156:99:4325,313,0
CP000253.1 1031089 . T G 5353.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.083;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9135;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.49;ReadPosRankSum=2.340;SOR=0.435 GT:AD:DP:GQ:PL 1/1:3,207:210:99:5382,388,0
CP000253.1 1031437 . A T 5587.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,237:240:99:5616,394,0
CP000253.1 1031563 . T C 4047.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2137;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4076,289,0
CP000253.1 1031747 . C T 1081.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:42:81:1110,81,0
CP000253.1 1031875 . A G 1967.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.853;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5731;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.56;ReadPosRankSum=-0.293;SOR=0.477 GT:AD:DP:GQ:PL 1/1:1,76:78:99:1996,141,0
CP000253.1 1032094 . A T 2478.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2507,175,0
CP000253.1 1032597 . G A 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 1032981 . A G 597.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:45:626,45,0
CP000253.1 1033390 . A T 1729.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=1.196 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1758,123,0
CP000253.1 1033673 . A T 96.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:124,9,0
CP000253.1 1034183 . G T 2509.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.808;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0517;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=7.417;QD=22.82;ReadPosRankSum=1.233;SOR=0.849 GT:AD:DP:GQ:PL 1/1:2,108:110:99:2538,155,0
CP000253.1 1034403 . G A 2410.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2439,169,0
CP000253.1 1034508 . C A 440.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:33:469,33,0
CP000253.1 1034637 . G A 164.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:193,15,0
CP000253.1 1035914 . G T 633.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:48:662,48,0
CP000253.1 1036712 . A T 1556.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.838;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.52;ReadPosRankSum=0.256;SOR=0.487 GT:AD:DP:GQ:PL 1/1:1,60:61:80:1585,80,0
CP000253.1 1036745 . T C 2402.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.00;SOR=1.338 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2431,175,0
CP000253.1 1036838 . A T 3752.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,150:152:99:3781,265,0
CP000253.1 1036877 . A G 4101.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6216;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,168:170:99:4130,292,0
CP000253.1 1037125 . T C 4030.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0010;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.69;ReadPosRankSum=0.425;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,150:152:99:4059,289,0
CP000253.1 1037536 . C T 2755.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.809;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.25;ReadPosRankSum=-0.462;SOR=0.874 GT:AD:DP:GQ:PL 1/1:1,104:105:99:2784,202,0
CP000253.1 1037624 . A G 2708.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.819;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.40;ReadPosRankSum=1.327;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,110:111:99:2737,193,0
CP000253.1 1037955 . A G 918.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5434;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:38:66:947,66,0
CP000253.1 1037992 . T A 872.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:63:901,63,0
CP000253.1 1038326 . A G 308.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:337,24,0
CP000253.1 1038590 . T A 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 1038641 . T A 508.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:537,36,0
CP000253.1 1039375 . T C 759.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:35:54:788,54,0
CP000253.1 1041716 . A G 1669.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6918;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1698,117,0
CP000253.1 1042280 . A G 1000.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1029,72,0
CP000253.1 1043445 . T A 2119.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.339 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2148,154,0
CP000253.1 1043454 . A T 2252.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2281,160,0
CP000253.1 1043466 . A G 2080.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=1.116 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2109,150,0
CP000253.1 1043478 . G A 2265.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2294,160,0
CP000253.1 1043484 . T A 2246.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9229;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2275,160,0
CP000253.1 1043505 . A G 2446.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0483;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.973 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2475,175,0
CP000253.1 1043658 . A G 5013.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7373;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,211:212:99:5042,355,0
CP000253.1 1043661 . T G 4886.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.622;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.38;ReadPosRankSum=1.393;SOR=0.915 GT:AD:DP:GQ:PL 1/1:2,207:211:99:4915,346,0
CP000253.1 1043676 . C T 4819.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7397;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,195:195:99:4848,340,0
CP000253.1 1043682 . A C 4375.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.511;DP=177;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.4113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.00;ReadPosRankSum=0.962;SOR=0.776 GT:AD:DP:GQ:PL 1/1:2,173:175:99:4404,313,0
CP000253.1 1043683 . G T 4350.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.609;DP=177;Dels=0.01;ExcessHet=3.0103;FS=2.063;HaplotypeScore=29.4100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=1.134;SOR=0.247 GT:AD:DP:GQ:PL 1/1:4,171:176:99:4379,313,0
CP000253.1 1043684 . T C 4287.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.600;DP=177;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=41.3705;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.36;ReadPosRankSum=-0.194;SOR=0.420 GT:AD:DP:GQ:PL 1/1:3,173:176:99:4316,308,0
CP000253.1 1043685 . T A 4356.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.604;DP=177;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.4796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=0.506;SOR=0.776 GT:AD:DP:GQ:PL 1/1:2,173:176:99:4385,313,0
CP000253.1 1043690 . C T 4315.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.740;DP=177;Dels=0.01;ExcessHet=3.0103;FS=3.087;HaplotypeScore=27.6848;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.66;ReadPosRankSum=-1.446;SOR=0.371 GT:AD:DP:GQ:PL 1/1:1,174:176:99:4344,296,0
CP000253.1 1043693 . T C 4354.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.457;DP=179;Dels=0.00;ExcessHet=3.0103;FS=4.440;HaplotypeScore=22.9974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.33;ReadPosRankSum=0.107;SOR=0.352 GT:AD:DP:GQ:PL 1/1:4,175:179:99:4383,272,0
CP000253.1 1043694 . C T 4249.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.495;DP=179;Dels=0.00;ExcessHet=3.0103;FS=4.471;HaplotypeScore=8.3070;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.74;ReadPosRankSum=0.103;SOR=0.352 GT:AD:DP:GQ:PL 1/1:4,175:179:99:4278,260,0
CP000253.1 1043745 . G A 5142.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2731;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,210:213:99:5171,361,0
CP000253.1 1043836 . T G 3458.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.079;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.85;ReadPosRankSum=1.988;SOR=0.697 GT:AD:DP:GQ:PL 1/1:3,142:145:99:3487,247,0
CP000253.1 1044090 . T C 1799.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=1.073 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1828,129,0
CP000253.1 1044244 . T G 216.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:245,18,0
CP000253.1 1044259 . G A 172.90 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:201,15,0
CP000253.1 1045519 . T C 270.41 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.002;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.31;ReadPosRankSum=-0.498;SOR=0.442 GT:AD:DP:GQ:PL 0/1:1,13:14:8:298,0,8
CP000253.1 1046366 . G T 317.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:346,24,0
CP000253.1 1048858 . T C 1068.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1097,78,0
CP000253.1 1049948 . G A 348.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:377,27,0
CP000253.1 1049991 . G A 751.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:54:780,54,0
CP000253.1 1050330 . A C 590.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:619,42,0
CP000253.1 1050643 . A G 177.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:206,15,0
CP000253.1 1051815 . T A 475.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:19:36:504,36,0
CP000253.1 1051842 . A C 575.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.512;DP=24;Dels=0.00;ExcessHet=3.0103;FS=3.802;HaplotypeScore=1.8237;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.99;ReadPosRankSum=0.869;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,23:24:45:604,45,0
CP000253.1 1052047 . T G 2408.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2437,169,0
CP000253.1 1052575 . T C 5793.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.886;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4545;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;MQRankSum=-0.045;QD=23.46;ReadPosRankSum=0.996;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,246:248:99:5822,406,0
CP000253.1 1052998 . A G 3009.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3038,214,0
CP000253.1 1053084 . C T 3106.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.993 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3135,223,0
CP000253.1 1053117 . T C 3073.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.64;ReadPosRankSum=1.440;SOR=0.501 GT:AD:DP:GQ:PL 1/1:1,129:132:99:3102,217,0
CP000253.1 1053174 . T A 2884.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2913,205,0
CP000253.1 1053366 . A T 3547.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2949;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3576,250,0
CP000253.1 1053376 . G T 3600.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3629,253,0
CP000253.1 1053552 . T G 2460.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.076;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7294;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=0.553;SOR=0.425 GT:AD:DP:GQ:PL 1/1:3,96:99:99:2489,178,0
CP000253.1 1053571 . C T 2551.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2169;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2580,187,0
CP000253.1 1053648 . C T 2416.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5521;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2445,178,0
CP000253.1 1054488 . C T 4004.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8346;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4033,283,0
CP000253.1 1054521 . A G 4087.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.752;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.33;ReadPosRankSum=1.433;SOR=0.683 GT:AD:DP:GQ:PL 1/1:1,167:169:99:4116,289,0
CP000253.1 1054632 . G A 4164.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4193,295,0
CP000253.1 1054851 . T C 4783.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.940;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7188;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;MQRankSum=0.000;QD=25.05;ReadPosRankSum=1.651;SOR=0.359 GT:AD:DP:GQ:PL 1/1:1,190:191:99:4812,343,0
CP000253.1 1054869 . C T 4590.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3413;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=25.36;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,181:183:99:4619,328,0
CP000253.1 1054961 . T C 4264.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5576;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=24.80;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4293,301,0
CP000253.1 1055151 . T C 3631.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.956 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3660,265,0
CP000253.1 1055292 . A G 3412.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3441,241,0
CP000253.1 1055390 . C T 3314.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.849;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0297;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.20;ReadPosRankSum=1.621;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,136:138:99:3343,232,0
CP000253.1 1055413 . G A 3263.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3292,229,0
CP000253.1 1055424 . T A 3252.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0335;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3281,226,0
CP000253.1 1055429 . C T 3178.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3207,223,0
CP000253.1 1055431 . A G 3208.76 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3237,226,0
CP000253.1 1055434 . G T 3178.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3207,223,0
CP000253.1 1055455 . A C 2685.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.199;DP=224;Dels=0.00;ExcessHet=3.0103;FS=1.662;HaplotypeScore=136.6794;MLEAC=1;MLEAF=0.500;MQ=59.98;MQ0=0;MQRankSum=1.769;QD=11.99;ReadPosRankSum=12.641;SOR=0.744 GT:AD:DP:GQ:PL 0/1:88,136:224:99:2714,0,1648
CP000253.1 1055480 . G T 2302.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.231;DP=215;Dels=0.00;ExcessHet=3.0103;FS=1.663;HaplotypeScore=15.5799;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=10.71;ReadPosRankSum=6.957;SOR=0.707 GT:AD:DP:GQ:PL 0/1:97,118:215:99:2331,0,1857
CP000253.1 1055613 . G T 2040.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2069,144,0
CP000253.1 1055619 . G A 1948.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2491;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,84:84:99:1977,141,0
CP000253.1 1055669 . T A 960.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.177;DP=40;Dels=0.00;ExcessHet=3.0103;FS=3.921;HaplotypeScore=2.4558;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.02;ReadPosRankSum=0.031;SOR=0.663 GT:AD:DP:GQ:PL 1/1:2,38:40:72:989,72,0
CP000253.1 1055696 . C T 1561.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:67:99:1590,111,0
CP000253.1 1055708 . G T 1605.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1634,114,0
CP000253.1 1055793 . T G 2397.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4715;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2426,172,0
CP000253.1 1055907 . G A 2217.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2246,154,0
CP000253.1 1055908 . G A 2206.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2235,154,0
CP000253.1 1055961 . T A 2019.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.528;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.95;ReadPosRankSum=0.743;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,86:88:99:2048,144,0
CP000253.1 1055981 . A G 1803.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5068;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1832,129,0
CP000253.1 1055991 . T G 1674.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.603;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.59;ReadPosRankSum=1.514;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1703,120,0
CP000253.1 1055999 . T C 1740.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9428;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1769,126,0
CP000253.1 1056081 . G A 1844.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:78:99:1873,129,0
CP000253.1 1056099 . G A 1684.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1587;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1713,120,0
CP000253.1 1056120 . C A 1540.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.34;ReadPosRankSum=1.710;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,65:66:99:1569,111,0
CP000253.1 1056199 . A G 894.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:63:923,63,0
CP000253.1 1056269 . C T 1042.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:75:1071,75,0
CP000253.1 1056392 . A T 757.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:54:786,54,0
CP000253.1 1056472 . A T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1056482 . G A 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1056485 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1056825 . A G 142.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:170,12,0
CP000253.1 1057036 . A G 1739.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.756;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3573;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.30;ReadPosRankSum=-0.623;SOR=0.264 GT:AD:DP:GQ:PL 1/1:1,77:78:99:1768,119,0
CP000253.1 1058427 . T G 3044.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3073,211,0
CP000253.1 1058448 . G A 2768.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,118:120:99:2797,193,0
CP000253.1 1058668 . A T 492.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:521,36,0
CP000253.1 1058826 . A G 1413.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.949;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.18;ReadPosRankSum=0.540;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1442,99,0
CP000253.1 1059197 . G A 1989.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2018,141,0
CP000253.1 1059204 . T A 1910.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0954;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1939,135,0
CP000253.1 1059380 . C T 611.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:45:640,45,0
CP000253.1 1059711 . C T 311.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:13:24:340,24,0
CP000253.1 1059813 . A T 1592.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1621,111,0
CP000253.1 1060230 . T G 3727.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3756,268,0
CP000253.1 1060305 . C A 3219.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=-0.419;SOR=0.857 GT:AD:DP:GQ:PL 1/1:1,123:125:99:3248,229,0
CP000253.1 1060677 . G A 2471.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2500,172,0
CP000253.1 1060998 . C T 1680.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1709,117,0
CP000253.1 1061151 . G A 2723.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2752,187,0
CP000253.1 1061673 . A G 500.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:529,36,0
CP000253.1 1062246 . C T 962.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:69:991,69,0
CP000253.1 1062489 . T G 2385.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2414,169,0
CP000253.1 1062491 . A G 2407.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4587;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2436,172,0
CP000253.1 1062624 . A C 2514.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.552;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.66;ReadPosRankSum=1.142;SOR=0.711 GT:AD:DP:GQ:PL 1/1:2,109:111:99:2543,175,0
CP000253.1 1062697 . C A 2185.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0860;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2214,157,0
CP000253.1 1062759 . C T 1654.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1683,120,0
CP000253.1 1062792 . A G 1503.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1532,108,0
CP000253.1 1062819 . T A 1190.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=1.280 GT:AD:DP:GQ:PL 1/1:0,45:45:87:1219,87,0
CP000253.1 1063324 . A T 1028.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:72:1057,72,0
CP000253.1 1063653 . C A 1284.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:93:1313,93,0
CP000253.1 1063929 . A C 3496.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.749;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.63;ReadPosRankSum=-0.937;SOR=0.558 GT:AD:DP:GQ:PL 1/1:1,147:148:99:3525,250,0
CP000253.1 1064109 . C T 4767.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7246;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,206:207:99:4796,337,0
CP000253.1 1064532 . G A 1200.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1229,84,0
CP000253.1 1065557 . T C 2547.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2576,181,0
CP000253.1 1065635 . C T 2386.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.82;ReadPosRankSum=0.876;SOR=0.518 GT:AD:DP:GQ:PL 1/1:1,88:90:99:2415,175,0
CP000253.1 1065698 . T C 2854.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.45;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2883,208,0
CP000253.1 1065815 . C T 4439.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.37;ReadPosRankSum=1.644;SOR=0.724 GT:AD:DP:GQ:PL 1/1:1,174:175:99:4468,319,0
CP000253.1 1066325 . G A 4193.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.06;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,155:155:99:4222,301,0
CP000253.1 1066616 . G A 3582.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.865;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.05;ReadPosRankSum=-0.378;SOR=0.259 GT:AD:DP:GQ:PL 1/1:1,142:143:99:3611,259,0
CP000253.1 1066679 . A C 4186.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1589;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,168:170:99:4215,295,0
CP000253.1 1067015 . G A 2891.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2920,208,0
CP000253.1 1067106 . C T 2233.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2262,163,0
CP000253.1 1067108 . G A 2312.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2341,166,0
CP000253.1 1068431 . C T 3650.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3679,256,0
CP000253.1 1068500 . G T 3728.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8581;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3757,265,0
CP000253.1 1069153 . G T 2060.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2089,144,0
CP000253.1 1069540 . T A 4590.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0575;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,196:196:99:4619,319,0
CP000253.1 1070109 . C G 435.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:33:464,33,0
CP000253.1 1070728 . T G 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 1070803 . T C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1070970 . A C 127.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=1;MLEAF=0.500;MQ=56.17;MQ0=0;MQRankSum=2.200;QD=14.20;ReadPosRankSum=2.200;SOR=0.941 GT:AD:DP:GQ:PL 0/1:2,7:9:30:156,0,30
CP000253.1 1071233 . T A 874.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:63:903,63,0
CP000253.1 1071234 . T A 860.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:63:889,63,0
CP000253.1 1071240 . A C 873.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:63:902,63,0
CP000253.1 1071245 . G T 878.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:63:907,63,0
CP000253.1 1071246 . T A 869.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:34:63:898,63,0
CP000253.1 1071709 . A G 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1071876 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1071890 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1071927 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1071929 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1071935 . A G 12.77 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:39,3,0
CP000253.1 1072824 . G A 359.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:388,27,0
CP000253.1 1072833 . T A 581.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:610,42,0
CP000253.1 1072906 . A G 728.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:51:757,51,0
CP000253.1 1072955 . G A 503.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.90;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:532,36,0
CP000253.1 1073109 . T A 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 1073120 . A T 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 1073564 . T G 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 1073566 . A G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1073571 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1073655 . A C 86.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=21.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:114,9,0
CP000253.1 1073669 . T C 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1073671 . G T 96.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=24.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:124,9,0
CP000253.1 1073676 . G A 88.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=22.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:116,9,0
CP000253.1 1073691 . C A 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 1073694 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1073695 . G T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1073718 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1073722 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:4:6:85,6,0
CP000253.1 1074287 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1074303 . A T 93.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:121,9,0
CP000253.1 1074747 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.85;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1074765 . C A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.85;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1074773 . A G 48.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=53.65;MQ0=0;MQRankSum=-1.803;QD=6.10;ReadPosRankSum=-2.450;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:77:77,0,77
CP000253.1 1074789 . C T 49.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=53.65;MQ0=0;MQRankSum=1.803;QD=6.22;ReadPosRankSum=2.450;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:78:78,0,78
CP000253.1 1074817 . C G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.85;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1075009 . T C 135.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:163,12,0
CP000253.1 1075054 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1075055 . G C 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1076222 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1076279 . G C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1076322 . C A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1076471 . A G 958.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:42:69:987,69,0
CP000253.1 1076518 . G A 1306.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.780;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.93;ReadPosRankSum=0.731;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,56:57:93:1335,93,0
CP000253.1 1076671 . A C 4150.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.862;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.58;ReadPosRankSum=-0.887;SOR=0.504 GT:AD:DP:GQ:PL 1/1:1,175:178:99:4179,289,0
CP000253.1 1076689 . G A 4556.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4849;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,195:197:99:4585,319,0
CP000253.1 1077151 . A G 356.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:385,27,0
CP000253.1 1077395 . A T 369.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:398,27,0
CP000253.1 1077396 . A T 369.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:398,27,0
CP000253.1 1077780 . G C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1077847 . A T 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 1077881 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1078110 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1078369 . C T 184.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:213,15,0
CP000253.1 1078405 . T G 224.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:253,18,0
CP000253.1 1078500 . C A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1078543 . T C 140.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.645;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=41.31;MQ0=0;MQRankSum=-0.842;QD=14.00;ReadPosRankSum=0.253;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,9:10:12:168,12,0
CP000253.1 1078614 . G T 140.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.799;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=33.85;MQ0=0;MQRankSum=3.087;QD=11.67;ReadPosRankSum=2.572;SOR=0.693 GT:AD:DP:GQ:PL 1/1:4,8:12:12:168,12,0
CP000253.1 1078618 . G A 106.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.799;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=33.85;MQ0=0;MQRankSum=3.087;QD=8.86;ReadPosRankSum=2.572;SOR=0.693 GT:AD:DP:GQ:PL 1/1:4,8:12:9:134,9,0
CP000253.1 1078620 . T A 140.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.799;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=33.85;MQ0=0;MQRankSum=3.087;QD=11.67;ReadPosRankSum=2.572;SOR=0.693 GT:AD:DP:GQ:PL 1/1:4,8:12:12:168,12,0
CP000253.1 1078621 . T G 140.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.139;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=33.85;MQ0=0;MQRankSum=3.087;QD=11.67;ReadPosRankSum=2.572;SOR=0.693 GT:AD:DP:GQ:PL 1/1:4,8:12:12:168,12,0
CP000253.1 1078673 . T C 170.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=43.58;MQ0=0;QD=18.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:199,15,0
CP000253.1 1078723 . T C 150.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.59;MQ0=0;QD=25.15;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:179,15,0
CP000253.1 1078724 . T C 159.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.59;MQ0=0;QD=26.65;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:188,15,0
CP000253.1 1078961 . T G 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 1079756 . C T 90.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:118,9,0
CP000253.1 1080301 . G A 265.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:294,21,0
CP000253.1 1080492 . C G 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 1080499 . A T 127.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:155,12,0
CP000253.1 1080500 . C T 138.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:166,12,0
CP000253.1 1080501 . G T 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 1080631 . T C 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 1080763 . C T 439.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:468,33,0
CP000253.1 1080987 . A G 1506.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5433;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.16;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1535,105,0
CP000253.1 1081035 . G A 1378.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:62:96:1407,96,0
CP000253.1 1081036 . T C 1400.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1429,99,0
CP000253.1 1081126 . A G 1240.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:54:87:1269,87,0
CP000253.1 1081130 . T C 1187.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:53:84:1216,84,0
CP000253.1 1081341 . T C 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1081342 . C T 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 1081378 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1081385 . G C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1081406 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1081979 . G A 2133.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8463;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2162,150,0
CP000253.1 1082399 . A G 2990.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7363;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3019,214,0
CP000253.1 1082474 . A T 4003.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1658;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4032,280,0
CP000253.1 1084035 . G A 2994.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8907;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3023,211,0
CP000253.1 1084290 . A G 2701.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2730,190,0
CP000253.1 1084323 . T C 2478.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9287;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,105:107:99:2507,175,0
CP000253.1 1085037 . G T 971.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:42:69:1000,69,0
CP000253.1 1085052 . C A 978.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:42:69:1007,69,0
CP000253.1 1085339 . G T 361.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.28;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:390,27,0
CP000253.1 1085572 . T C 225.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:254,18,0
CP000253.1 1086123 . A G 273.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:302,21,0
CP000253.1 1086180 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:12:175,12,0
CP000253.1 1086279 . G A 892.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:63:921,63,0
CP000253.1 1086431 . G T 437.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:466,33,0
CP000253.1 1086471 . A G 609.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:638,45,0
CP000253.1 1086576 . T A 674.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:703,48,0
CP000253.1 1086640 . T C 741.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:54:770,54,0
CP000253.1 1087447 . T A 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 1087597 . G A 269.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:298,21,0
CP000253.1 1087610 . A T 270.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:299,21,0
CP000253.1 1087848 . A G 933.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.899;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.23;ReadPosRankSum=0.580;SOR=0.242 GT:AD:DP:GQ:PL 1/1:1,41:42:66:962,66,0
CP000253.1 1088208 . A G 176.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.48;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:205,15,0
CP000253.1 1089347 . A G 309.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:338,24,0
CP000253.1 1089644 . A C 751.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:780,54,0
CP000253.1 1090224 . T C 134.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:162,12,0
CP000253.1 1090544 . G A 1494.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1523,105,0
CP000253.1 1090833 . T A 3694.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1583;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3723,262,0
CP000253.1 1091211 . T C 919.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:69:948,69,0
CP000253.1 1093001 . C T 2702.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6926;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.257 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2731,196,0
CP000253.1 1093055 . C T 2996.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.081 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3025,217,0
CP000253.1 1093244 . T C 4093.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.7278;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4122,292,0
CP000253.1 1093343 . A G 3881.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.714;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3040;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.24;ReadPosRankSum=-0.162;SOR=1.008 GT:AD:DP:GQ:PL 1/1:2,165:167:99:3910,240,0
CP000253.1 1094225 . A G 5951.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5516;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,248:250:99:5980,415,0
CP000253.1 1095181 . A G 4703.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,191:192:99:4732,334,0
CP000253.1 1095277 . G T 3882.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.987;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.12;ReadPosRankSum=2.670;SOR=0.489 GT:AD:DP:GQ:PL 1/1:3,158:162:99:3911,280,0
CP000253.1 1095499 . G A 2113.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5243;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,90:91:99:2142,150,0
CP000253.1 1095754 . T C 2223.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0994;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2252,157,0
CP000253.1 1095838 . T C 1798.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,77:78:99:1827,126,0
CP000253.1 1096129 . T A 1043.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1072,75,0
CP000253.1 1096133 . A G 962.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:69:991,69,0
CP000253.1 1096181 . C A 395.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:424,30,0
CP000253.1 1096762 . A T 1531.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1560,108,0
CP000253.1 1096900 . A G 3677.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,161:161:99:3706,256,0
CP000253.1 1097122 . C G 1346.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1375,99,0
CP000253.1 1097408 . T C 2018.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2047,141,0
CP000253.1 1097471 . A G 1957.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1986,138,0
CP000253.1 1097486 . A G 1838.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1867,129,0
CP000253.1 1097498 . A G 1865.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1894,132,0
CP000253.1 1097534 . C T 1774.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1803,126,0
CP000253.1 1097567 . G A 1449.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1478,102,0
CP000253.1 1097891 . C T 2314.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2343,163,0
CP000253.1 1098014 . G A 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1098836 . A G 514.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:543,39,0
CP000253.1 1098951 . A G 435.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:33:464,33,0
CP000253.1 1098961 . A G 472.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.81;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:36:501,36,0
CP000253.1 1099075 . T G 631.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6492;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.38;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:32:45:660,45,0
CP000253.1 1099080 . T G 674.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:48:703,48,0
CP000253.1 1099087 . A G 685.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:48:714,48,0
CP000253.1 1099135 . T A 767.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:54:796,54,0
CP000253.1 1099238 . G A 777.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:806,54,0
CP000253.1 1099268 . G A 451.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2327;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:33:480,33,0
CP000253.1 1099400 . A G 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1099449 . A G 221.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:250,18,0
CP000253.1 1099875 . C A 2502.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.902;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0382;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.17;ReadPosRankSum=1.541;SOR=0.496 GT:AD:DP:GQ:PL 1/1:1,107:108:99:2531,175,0
CP000253.1 1101823 . T C 2973.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4003;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.973 GT:AD:DP:GQ:PL 1/1:0,119:120:99:3002,214,0
CP000253.1 1102162 . C T 4956.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,194:194:99:4985,352,0
CP000253.1 1102696 . A G 3173.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1425;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.125 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3202,226,0
CP000253.1 1102723 . T A 2298.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=1.141 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2327,163,0
CP000253.1 1102881 . A G 206.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:235,18,0
CP000253.1 1102886 . T C 292.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:321,24,0
CP000253.1 1102911 . G C 175.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:204,15,0
CP000253.1 1103081 . G A 698.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8245;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:29:51:727,51,0
CP000253.1 1103135 . T C 3085.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.20;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3114,214,0
CP000253.1 1103261 . T C 4852.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,218:218:99:4881,334,0
CP000253.1 1103683 . C A 406.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.41;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:435,30,0
CP000253.1 1103692 . T A 362.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.34;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:391,27,0
CP000253.1 1104061 . C T 4983.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,211:211:99:5012,346,0
CP000253.1 1104606 . A C 2026.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.841;DP=83;Dels=0.00;ExcessHet=3.0103;FS=3.294;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=-1.746;SOR=0.433 GT:AD:DP:GQ:PL 1/1:3,80:83:99:2055,147,0
CP000253.1 1105124 . C T 261.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:21:290,21,0
CP000253.1 1105578 . G A 1865.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9999;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1894,129,0
CP000253.1 1105600 . C T 2371.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6722;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2400,166,0
CP000253.1 1105668 . A C 3020.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3049,208,0
CP000253.1 1105680 . T C 3024.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1957;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3053,208,0
CP000253.1 1105683 . A G 2961.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9839;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.62;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,137:137:99:2990,205,0
CP000253.1 1105743 . C T 2837.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9163;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.00;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,129:129:99:2866,196,0
CP000253.1 1105773 . T G 2794.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8432;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.01;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,127:127:99:2823,193,0
CP000253.1 1106097 . C T 1263.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:87:1292,87,0
CP000253.1 1109724 . C T 3058.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1975;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3087,214,0
CP000253.1 1109877 . T G 1111.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.12;SOR=1.501 GT:AD:DP:GQ:PL 1/1:0,41:41:81:1140,81,0
CP000253.1 1109904 . C T 420.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.05;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:33:449,33,0
CP000253.1 1110006 . C T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1110029 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1110030 . G A 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 1110076 . G A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1110079 . A T 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 1110202 . C A 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1110260 . A G 136.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:164,12,0
CP000253.1 1110517 . G A 2479.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9465;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2508,175,0
CP000253.1 1110578 . A G 2677.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4193;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:118:99:2706,187,0
CP000253.1 1111168 . T G 308.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.01;MQ0=0;QD=22.06;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:337,24,0
CP000253.1 1111692 . T G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1111767 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1112195 . C A 136.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:164,12,0
CP000253.1 1113001 . T G 2824.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.860;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3729;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.35;ReadPosRankSum=1.733;SOR=0.607 GT:AD:DP:GQ:PL 1/1:1,120:121:99:2853,199,0
CP000253.1 1113209 . C T 729.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.07;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,26:26:54:758,54,0
CP000253.1 1113250 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1113271 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1113320 . T A 178.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.88;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:207,15,0
CP000253.1 1113321 . A T 151.03 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.78;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:12:179,12,0
CP000253.1 1113322 . T C 176.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.66;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:205,15,0
CP000253.1 1113616 . C T 2017.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2046,144,0
CP000253.1 1113907 . C T 2555.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2584,178,0
CP000253.1 1114385 . C A 2024.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0438;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2053,141,0
CP000253.1 1114505 . A C 2901.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5949;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2930,208,0
CP000253.1 1114604 . G A 3888.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9282;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3917,274,0
CP000253.1 1114691 . G A 4933.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.1061;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,202:203:99:4962,352,0
CP000253.1 1114934 . T A 5906.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6193;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,224:227:99:5935,421,0
CP000253.1 1115105 . C T 6407.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,247:250:99:6436,452,0
CP000253.1 1115291 . C A 4829.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,200:200:99:4858,337,0
CP000253.1 1116326 . G A 946.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:42:66:975,66,0
CP000253.1 1116395 . A G 932.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:66:961,66,0
CP000253.1 1116619 . C A 1409.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=1.159 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1438,102,0
CP000253.1 1117961 . G T 3752.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,149:151:99:3781,265,0
CP000253.1 1118138 . G A 6390.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=1.046 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6419,457,0
CP000253.1 1119681 . A T 3559.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4907;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3588,250,0
CP000253.1 1120275 . C G 2125.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2154,153,0
CP000253.1 1120341 . C T 1038.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1067,75,0
CP000253.1 1121005 . A T 3163.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.790;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.36;ReadPosRankSum=-0.967;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,119:120:99:3192,229,0
CP000253.1 1121283 . G A 4004.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4033,286,0
CP000253.1 1121313 . A G 3249.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3278,235,0
CP000253.1 1121433 . G A 2943.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2345;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2972,211,0
CP000253.1 1121451 . T C 2578.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.973 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2607,184,0
CP000253.1 1121592 . C A 1397.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8118;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1426,105,0
CP000253.1 1121607 . A G 1443.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.741;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1116;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.78;ReadPosRankSum=1.612;SOR=0.636 GT:AD:DP:GQ:PL 1/1:1,55:56:99:1472,111,0
CP000253.1 1121667 . A T 2294.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6157;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2323,172,0
CP000253.1 1121679 . G A 2675.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2350;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2704,193,0
CP000253.1 1121736 . C T 3706.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.470;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5270;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.56;ReadPosRankSum=-1.552;SOR=0.182 GT:AD:DP:GQ:PL 1/1:2,143:146:99:3735,271,0
CP000253.1 1121910 . T C 5442.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.3928;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,236:239:99:5471,385,0
CP000253.1 1122551 . G C 2890.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:125:99:2919,202,0
CP000253.1 1122788 . A G 1861.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1890,132,0
CP000253.1 1123337 . T A 2283.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2312,163,0
CP000253.1 1123822 . A G 311.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:340,24,0
CP000253.1 1124142 . C T 527.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:556,39,0
CP000253.1 1124196 . A G 929.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:40:66:958,66,0
CP000253.1 1124257 . C A 1447.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1476,102,0
CP000253.1 1124351 . C A 1763.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.007;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.91;ReadPosRankSum=1.306;SOR=0.391 GT:AD:DP:GQ:PL 1/1:1,76:77:99:1792,123,0
CP000253.1 1124717 . G A 459.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:20:36:488,36,0
CP000253.1 1124826 . C G 446.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:475,33,0
CP000253.1 1124829 . T A 450.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:479,33,0
CP000253.1 1124837 . G T 446.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:20:33:475,33,0
CP000253.1 1124839 . C G 477.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:506,36,0
CP000253.1 1124841 . A C 487.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:516,36,0
CP000253.1 1124850 . T G 447.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:476,33,0
CP000253.1 1124883 . G A 1074.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.93;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:78:1103,78,0
CP000253.1 1124981 . A G 1669.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,70:71:99:1698,117,0
CP000253.1 1125002 . A G 1895.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1924,132,0
CP000253.1 1125200 . A G 1007.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0671;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=23.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:44:72:1036,72,0
CP000253.1 1125389 . G A 606.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:45:635,45,0
CP000253.1 1125539 . C T 772.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:57:801,57,0
CP000253.1 1125608 . A G 1542.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1571,111,0
CP000253.1 1125743 . A G 1479.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8499;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1508,105,0
CP000253.1 1125761 . C T 1449.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1478,102,0
CP000253.1 1125782 . T C 1484.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4380;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1513,105,0
CP000253.1 1125902 . A G 1838.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:79:99:1867,129,0
CP000253.1 1126511 . A G 2071.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2100,147,0
CP000253.1 1126562 . G T 1696.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1725,120,0
CP000253.1 1126636 . A G 650.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.12;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:48:679,48,0
CP000253.1 1126666 . T C 342.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:371,27,0
CP000253.1 1126690 . T C 317.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.19;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:346,24,0
CP000253.1 1127051 . C T 2548.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2577,181,0
CP000253.1 1127208 . C T 5870.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7910;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,248:248:99:5899,403,0
CP000253.1 1127240 . A T 5704.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.38;ReadPosRankSum=1.136;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,243:244:99:5733,400,0
CP000253.1 1127279 . T C 5719.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6451;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,242:242:99:5748,400,0
CP000253.1 1127280 . G A 5823.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7511;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,244:244:99:5852,403,0
CP000253.1 1128420 . A T 1787.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8508;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1816,129,0
CP000253.1 1129032 . A G 646.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:48:675,48,0
CP000253.1 1129424 . G A 1588.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1617,111,0
CP000253.1 1130174 . A G 2406.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2435,178,0
CP000253.1 1130194 . G A 2366.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.532;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2812;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.18;ReadPosRankSum=2.044;SOR=0.578 GT:AD:DP:GQ:PL 1/1:2,92:95:99:2395,175,0
CP000253.1 1130419 . G A 4615.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4644,331,0
CP000253.1 1130966 . A C 3174.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3540;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=1.187 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3203,232,0
CP000253.1 1131271 . T A 459.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:488,33,0
CP000253.1 1131809 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1131817 . A C 14.68 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.674;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=7.34;ReadPosRankSum=-0.674;SOR=1.447 GT:AD:DP:GQ:PL 1/1:1,1:2:3:41,3,0
CP000253.1 1133061 . C T 271.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:300,21,0
CP000253.1 1133372 . A T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1133458 . A T 226.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:255,18,0
CP000253.1 1133484 . T C 261.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.09;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:21:290,21,0
CP000253.1 1133962 . C T 2309.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2338,163,0
CP000253.1 1134302 . A G 1619.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3589;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1648,117,0
CP000253.1 1134419 . T A 2004.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2033,141,0
CP000253.1 1134425 . G C 2012.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2041,141,0
CP000253.1 1134455 . G A 2054.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.206;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.46;ReadPosRankSum=-1.653;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,83:84:99:2083,144,0
CP000253.1 1134689 . C T 3876.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.906;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.9350;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.85;ReadPosRankSum=1.741;SOR=0.838 GT:AD:DP:GQ:PL 1/1:1,149:150:99:3905,280,0
CP000253.1 1135057 . A C 5157.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.178;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0289;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.21;ReadPosRankSum=2.393;SOR=0.980 GT:AD:DP:GQ:PL 1/1:2,211:213:99:5186,325,0
CP000253.1 1135309 . T A 561.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:42:590,42,0
CP000253.1 1135548 . A C 3683.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3712,256,0
CP000253.1 1135957 . A G 1222.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1251,87,0
CP000253.1 1136155 . A C 1624.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1653,114,0
CP000253.1 1136219 . T C 1521.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2632;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1550,108,0
CP000253.1 1136472 . G T 2028.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3158;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:87:99:2057,144,0
CP000253.1 1136745 . C T 2075.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.718;DP=87;Dels=0.00;ExcessHet=3.0103;FS=3.434;HaplotypeScore=8.5429;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.14;ReadPosRankSum=0.202;SOR=0.568 GT:AD:DP:GQ:PL 1/1:1,85:87:99:2104,150,0
CP000253.1 1137036 . T C 2544.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8134;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2573,184,0
CP000253.1 1137582 . T C 1203.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:87:1232,87,0
CP000253.1 1137664 . C G 858.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:35:63:887,63,0
CP000253.1 1137847 . C A 1336.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1365,93,0
CP000253.1 1138283 . T A 1362.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5047;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:56:96:1391,96,0
CP000253.1 1138472 . C T 2590.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2619,181,0
CP000253.1 1138529 . A G 2526.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2950;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2555,175,0
CP000253.1 1139576 . C A 1267.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1296,90,0
CP000253.1 1139762 . A G 2521.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2550,178,0
CP000253.1 1140074 . T C 543.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:572,39,0
CP000253.1 1140192 . G A 358.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:387,27,0
CP000253.1 1140194 . A T 315.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:344,24,0
CP000253.1 1140282 . C A 482.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:511,36,0
CP000253.1 1140293 . A T 478.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:507,36,0
CP000253.1 1140299 . G T 443.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:472,33,0
CP000253.1 1140305 . A G 439.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:468,33,0
CP000253.1 1140568 . T A 2406.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2435,169,0
CP000253.1 1140586 . T C 2475.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2282;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2504,175,0
CP000253.1 1140611 . G A 2341.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9657;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2370,163,0
CP000253.1 1140749 . A G 2646.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.774;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.120;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,115:117:99:2675,187,0
CP000253.1 1140799 . A T 2384.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6662;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2413,169,0
CP000253.1 1141381 . C T 582.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:611,42,0
CP000253.1 1141700 . C T 2883.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0351;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,126:126:99:2912,202,0
CP000253.1 1141909 . G A 2605.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.698;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.06;ReadPosRankSum=-1.261;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,112:115:99:2634,158,0
CP000253.1 1141976 . G A 1697.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.865;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4841;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.26;ReadPosRankSum=-0.795;SOR=0.779 GT:AD:DP:GQ:PL 1/1:2,71:73:82:1726,82,0
CP000253.1 1142633 . A T 350.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:379,27,0
CP000253.1 1142731 . A G 579.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:608,42,0
CP000253.1 1143838 . C T 539.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:568,39,0
CP000253.1 1145037 . T C 1812.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7609;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1841,129,0
CP000253.1 1145166 . C T 1212.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1241,87,0
CP000253.1 1145211 . T A 1815.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1844,129,0
CP000253.1 1145709 . A T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1145730 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1146201 . G A 1058.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:75:1087,75,0
CP000253.1 1146580 . A T 4228.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7202;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4257,298,0
CP000253.1 1146762 . T G 5580.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5609,400,0
CP000253.1 1147435 . A G 5269.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,201:201:99:5298,382,0
CP000253.1 1147725 . A G 5217.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.3862;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,216:217:99:5246,367,0
CP000253.1 1147878 . T C 2693.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=1.168 GT:AD:DP:GQ:PL 1/1:0,105:107:99:2722,193,0
CP000253.1 1147893 . G A 2476.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2505,178,0
CP000253.1 1147995 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1148017 . T A 544.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:22:42:573,42,0
CP000253.1 1148760 . G A 2099.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2128,150,0
CP000253.1 1148774 . A G 2261.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=1.046 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2290,163,0
CP000253.1 1148980 . C T 2430.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4490;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2459,172,0
CP000253.1 1149197 . A T 1635.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1664,117,0
CP000253.1 1149238 . A T 1326.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1355,93,0
CP000253.1 1149254 . T A 1501.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3490;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:65:99:1530,105,0
CP000253.1 1149464 . T A 1704.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.06;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:65:99:1733,123,0
CP000253.1 1149506 . C A 2648.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.49;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2677,190,0
CP000253.1 1149705 . G A 5472.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.983 GT:AD:DP:GQ:PL 1/1:0,225:225:99:5501,388,0
CP000253.1 1149720 . C T 5585.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0902;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,225:226:99:5614,397,0
CP000253.1 1149759 . G A 5528.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,223:224:99:5557,391,0
CP000253.1 1149762 . C G 5365.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.858;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7275;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.95;ReadPosRankSum=1.330;SOR=0.291 GT:AD:DP:GQ:PL 1/1:1,223:224:99:5394,382,0
CP000253.1 1149765 . A G 5617.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7280;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,227:227:99:5646,403,0
CP000253.1 1149834 . A G 4897.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6959;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.33;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,186:187:99:4926,361,0
CP000253.1 1151505 . G A 729.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:32:54:758,54,0
CP000253.1 1152364 . C T 3193.69 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2794;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3222,223,0
CP000253.1 1152722 . C T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1153533 . C T 3335.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3364,232,0
CP000253.1 1153602 . T A 3107.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3136,214,0
CP000253.1 1153617 . T C 3024.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3053,211,0
CP000253.1 1153695 . G A 2052.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2081,144,0
CP000253.1 1154157 . C T 745.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:30:57:774,57,0
CP000253.1 1154274 . T C 1925.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1954,135,0
CP000253.1 1154338 . T C 2419.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2067;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2448,169,0
CP000253.1 1154583 . C T 2733.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8335;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2762,193,0
CP000253.1 1154598 . T G 2815.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.713;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7671;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.46;ReadPosRankSum=-1.517;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,119:120:99:2844,198,0
CP000253.1 1154742 . T C 2567.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.381;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.69;ReadPosRankSum=0.767;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,103:104:99:2596,150,0
CP000253.1 1154781 . A C 2479.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7910;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2508,178,0
CP000253.1 1155097 . T C 3326.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3355,235,0
CP000253.1 1155100 . C T 3102.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,136:137:99:3131,220,0
CP000253.1 1155186 . T A 2941.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2970,208,0
CP000253.1 1155204 . C G 2705.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2734,193,0
CP000253.1 1155290 . A G 1010.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:75:1039,75,0
CP000253.1 1155429 . A T 1369.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1398,99,0
CP000253.1 1155489 . A G 2234.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2263,163,0
CP000253.1 1155497 . A C 2250.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.836;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8791;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.58;ReadPosRankSum=1.320;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,87:88:99:2279,166,0
CP000253.1 1155571 . C T 2593.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.881;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.70;ReadPosRankSum=-0.611;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,104:106:99:2622,184,0
CP000253.1 1156408 . C G 3858.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7193;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=1.141 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3887,274,0
CP000253.1 1156468 . C T 4188.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.782;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.21;ReadPosRankSum=-0.070;SOR=0.689 GT:AD:DP:GQ:PL 1/1:1,172:174:99:4217,298,0
CP000253.1 1156829 . G A 4319.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6136;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=24.68;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,175:176:99:4348,310,0
CP000253.1 1156878 . T A 4010.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9306;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=25.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4039,286,0
CP000253.1 1156913 . T C 3927.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0249;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=25.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,152:154:99:3956,283,0
CP000253.1 1157066 . C T 3474.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.539;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.00;ReadPosRankSum=-0.159;SOR=0.737 GT:AD:DP:GQ:PL 1/1:2,137:140:99:3503,250,0
CP000253.1 1157414 . C T 3839.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9248;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,157:158:99:3868,271,0
CP000253.1 1157519 . A C 2791.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2820,196,0
CP000253.1 1157580 . T G 1677.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8241;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:71:99:1706,120,0
CP000253.1 1157682 . T C 349.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7478;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:378,27,0
CP000253.1 1157947 . G C 1036.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,41:41:75:1065,75,0
CP000253.1 1157960 . T C 1052.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1775;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:43:78:1081,78,0
CP000253.1 1158050 . C T 2243.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2272,160,0
CP000253.1 1158185 . C A 3963.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.928;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.32;ReadPosRankSum=-1.651;SOR=0.280 GT:AD:DP:GQ:PL 1/1:1,169:170:99:3992,277,0
CP000253.1 1158208 . G A 4420.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4449,307,0
CP000253.1 1158565 . C A 4746.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.785;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.10;ReadPosRankSum=-0.668;SOR=0.287 GT:AD:DP:GQ:PL 1/1:1,196:197:99:4775,334,0
CP000253.1 1159219 . G A 2418.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1826;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2447,172,0
CP000253.1 1159425 . T G 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1159477 . G T 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1159483 . G A 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1159490 . G T 234.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:263,18,0
CP000253.1 1159550 . A G 175.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:204,15,0
CP000253.1 1159551 . T G 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 1159552 . T C 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 1160513 . G A 305.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:334,24,0
CP000253.1 1160531 . A G 352.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:381,27,0
CP000253.1 1161009 . C T 3166.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.936;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.17;ReadPosRankSum=1.654;SOR=0.422 GT:AD:DP:GQ:PL 1/1:1,130:132:99:3195,223,0
CP000253.1 1161105 . T G 3489.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2831;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3518,244,0
CP000253.1 1161114 . T C 3120.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3149,220,0
CP000253.1 1161117 . A T 3115.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4416;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3144,223,0
CP000253.1 1161120 . A G 3161.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4416;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3190,223,0
CP000253.1 1161123 . G A 3162.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3191,223,0
CP000253.1 1161126 . A G 3135.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3164,220,0
CP000253.1 1161129 . G A 3214.74 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3243,226,0
CP000253.1 1161135 . C A 3295.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.938;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8252;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.88;ReadPosRankSum=-1.029;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,137:138:99:3324,232,0
CP000253.1 1161389 . C A 426.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.67;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:33:455,33,0
CP000253.1 1161454 . A T 1729.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.721;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.36;ReadPosRankSum=-0.812;SOR=0.499 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1758,123,0
CP000253.1 1161472 . T A 1858.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1887,132,0
CP000253.1 1161585 . A G 2589.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,107:108:99:2618,184,0
CP000253.1 1161682 . G A 2857.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5198;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:127:99:2886,202,0
CP000253.1 1162028 . C T 78.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=9.85;ReadPosRankSum=2.450;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,4:8:74:107,0,74
CP000253.1 1162032 . C A 96.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:124,9,0
CP000253.1 1162034 . C T 94.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:122,9,0
CP000253.1 1162061 . G C 92.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:120,9,0
CP000253.1 1162282 . A G 824.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:853,60,0
CP000253.1 1162292 . T G 779.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:57:808,57,0
CP000253.1 1162399 . A T 881.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:63:910,63,0
CP000253.1 1162426 . T C 744.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.838;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.57;ReadPosRankSum=1.477;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,32:35:54:773,54,0
CP000253.1 1162533 . G A 899.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:63:928,63,0
CP000253.1 1162566 . C A 768.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.96;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:54:797,54,0
CP000253.1 1162776 . C A 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 1162847 . A G 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 1163005 . C G 543.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:572,39,0
CP000253.1 1163019 . C T 459.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:22:33:488,33,0
CP000253.1 1163125 . G A 480.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:509,36,0
CP000253.1 1163271 . A G 241.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8646;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;QD=21.98;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:12:18:259,18,0
CP000253.1 1163380 . G A 404.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:433,30,0
CP000253.1 1163494 . T C 346.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:15:27:375,27,0
CP000253.1 1163559 . T A 244.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.40;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:273,21,0
CP000253.1 1163569 . G A 270.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:299,21,0
CP000253.1 1163571 . A T 273.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:302,21,0
CP000253.1 1163575 . G T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1163647 . A G 178.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:207,15,0
CP000253.1 1163737 . T A 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 1164007 . T A 1161.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4568;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:54:81:1190,81,0
CP000253.1 1164294 . C T 403.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:432,30,0
CP000253.1 1164403 . C T 956.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:66:985,66,0
CP000253.1 1164552 . G T 715.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.69;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:51:744,51,0
CP000253.1 1164613 . G A 708.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:737,51,0
CP000253.1 1165005 . A T 86.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:114,9,0
CP000253.1 1165631 . G A 2980.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3009,208,0
CP000253.1 1166346 . G A 1737.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4814;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1766,123,0
CP000253.1 1166408 . G T 1614.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1643,114,0
CP000253.1 1166609 . A G 1764.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1793,123,0
CP000253.1 1166663 . T C 1632.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6623;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1661,114,0
CP000253.1 1166687 . C T 1653.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2797;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1682,117,0
CP000253.1 1167011 . T A 2793.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,116:117:99:2822,196,0
CP000253.1 1167167 . G A 2273.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7617;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2302,166,0
CP000253.1 1167930 . C T 3645.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3674,259,0
CP000253.1 1168529 . T A 4025.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5563;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4054,286,0
CP000253.1 1168542 . T C 4045.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.61;ReadPosRankSum=-1.141;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,157:158:99:4074,289,0
CP000253.1 1168712 . G A 4208.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.051;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=1.661;SOR=0.576 GT:AD:DP:GQ:PL 1/1:1,168:170:99:4237,295,0
CP000253.1 1168862 . T A 1700.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=1.647 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1729,123,0
CP000253.1 1168970 . T A 427.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,17:17:33:456,33,0
CP000253.1 1169059 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1169161 . G T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1169162 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1169169 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1169204 . T C 175.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:204,15,0
CP000253.1 1169582 . T C 402.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:431,30,0
CP000253.1 1170423 . G A 275.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:304,21,0
CP000253.1 1171121 . T C 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1171185 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1171266 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1171926 . A T 134.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:162,12,0
CP000253.1 1172371 . T C 930.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7523;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:66:959,66,0
CP000253.1 1172395 . C T 1323.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8216;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1352,93,0
CP000253.1 1172682 . T A 212.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:241,18,0
CP000253.1 1173258 . A G 1428.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9394;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1457,105,0
CP000253.1 1173285 . T A 1378.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7728;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.34;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:48:99:1407,102,0
CP000253.1 1173297 . A G 1332.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9824;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.20;ReadPosRankSum=1.733;SOR=0.487 GT:AD:DP:GQ:PL 1/1:1,48:49:99:1361,99,0
CP000253.1 1173306 . G T 1304.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.99;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:96:1333,96,0
CP000253.1 1173475 . C T 668.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:51:697,51,0
CP000253.1 1173514 . T C 906.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:66:935,66,0
CP000253.1 1173758 . T C 2215.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.656;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.62;ReadPosRankSum=-1.271;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,89:91:99:2244,160,0
CP000253.1 1174449 . G A 6469.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.882;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.7834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.18;ReadPosRankSum=1.172;SOR=0.486 GT:AD:DP:GQ:PL 1/1:1,237:239:99:6498,467,0
CP000253.1 1174458 . C A 6369.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4412;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,236:236:99:6398,460,0
CP000253.1 1174558 . A G 4840.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.791;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.6571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.21;ReadPosRankSum=0.361;SOR=0.391 GT:AD:DP:GQ:PL 1/1:1,191:192:99:4869,352,0
CP000253.1 1174904 . T C 610.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:639,45,0
CP000253.1 1174911 . T G 592.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:621,45,0
CP000253.1 1174967 . A T 171.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7776;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=28.65;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:200,15,0
CP000253.1 1175528 . G A 1416.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.73;SOR=1.077 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1445,105,0
CP000253.1 1175681 . G A 2871.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6824;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2900,205,0
CP000253.1 1175753 . A G 3060.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2562;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,123:124:99:3089,223,0
CP000253.1 1175828 . G A 2995.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0334;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,118:121:99:3024,217,0
CP000253.1 1175861 . T C 2979.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,119:120:99:3008,211,0
CP000253.1 1175879 . T C 2887.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2916,208,0
CP000253.1 1175891 . G A 2831.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.840;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.28;ReadPosRankSum=0.480;SOR=0.309 GT:AD:DP:GQ:PL 1/1:1,111:114:99:2860,205,0
CP000253.1 1175939 . C T 2647.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0329;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2676,193,0
CP000253.1 1175945 . A G 2695.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7322;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2724,196,0
CP000253.1 1175996 . T C 2540.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:101:99:2569,181,0
CP000253.1 1176017 . G A 2564.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2337;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2593,181,0
CP000253.1 1176146 . G A 1856.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5111;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,77:78:99:1885,132,0
CP000253.1 1176173 . A T 1717.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1746,123,0
CP000253.1 1176790 . T A 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1176835 . C T 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 1176899 . G C 233.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:262,18,0
CP000253.1 1176907 . T A 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1177294 . C T 1680.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1709,120,0
CP000253.1 1177388 . G T 1858.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.429;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2080;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.23;ReadPosRankSum=1.603;SOR=0.127 GT:AD:DP:GQ:PL 1/1:2,78:80:99:1887,132,0
CP000253.1 1177743 . G A 3034.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3063,214,0
CP000253.1 1177872 . C T 2682.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2222;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,107:108:99:2711,193,0
CP000253.1 1178034 . T C 2215.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.891;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4346;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.18;ReadPosRankSum=0.276;SOR=0.883 GT:AD:DP:GQ:PL 1/1:1,87:88:99:2244,160,0
CP000253.1 1178067 . A G 1922.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5338;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1951,138,0
CP000253.1 1178199 . C T 981.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.356;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.05;ReadPosRankSum=-0.945;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,34:35:75:1010,75,0
CP000253.1 1178239 . G C 632.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.51;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:48:661,48,0
CP000253.1 1178336 . C T 1215.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,47:47:87:1244,87,0
CP000253.1 1179854 . A G 609.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:45:638,45,0
CP000253.1 1180064 . G A 2918.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3483;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,125:125:99:2947,208,0
CP000253.1 1180534 . G A 469.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:36:498,36,0
CP000253.1 1180543 . T C 444.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:33:473,33,0
CP000253.1 1181138 . G A 1398.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1427,99,0
CP000253.1 1181809 . G A 1619.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7441;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1648,117,0
CP000253.1 1181886 . C T 2388.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3621;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.69;ReadPosRankSum=-0.913;SOR=0.729 GT:AD:DP:GQ:PL 1/1:1,92:93:99:2417,172,0
CP000253.1 1182033 . T A 3152.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1035;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,130:132:99:3181,223,0
CP000253.1 1183456 . A G 1598.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.65;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1627,117,0
CP000253.1 1183603 . C T 1971.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7523;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2000,141,0
CP000253.1 1183777 . A G 2732.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,118:119:99:2761,193,0
CP000253.1 1183792 . T C 2640.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:118:99:2669,184,0
CP000253.1 1183828 . T A 2946.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2975,208,0
CP000253.1 1183849 . A G 2819.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2848,202,0
CP000253.1 1183993 . C T 1915.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=1.108 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1944,138,0
CP000253.1 1184419 . C T 438.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:467,33,0
CP000253.1 1184602 . T C 1526.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2851;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1555,111,0
CP000253.1 1184642 . G A 1472.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.832;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.31;ReadPosRankSum=1.314;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,65:66:99:1501,105,0
CP000253.1 1184680 . C T 1312.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.25;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:93:1341,93,0
CP000253.1 1185679 . G A 1529.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.85;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1558,105,0
CP000253.1 1185697 . T C 1548.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6487;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1577,108,0
CP000253.1 1185733 . A G 1488.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1517,105,0
CP000253.1 1185778 . A G 1400.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:61:99:1429,99,0
CP000253.1 1185781 . A T 1395.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.88;ReadPosRankSum=1.623;SOR=0.435 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1424,99,0
CP000253.1 1186209 . T A 139.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:167,12,0
CP000253.1 1186323 . C A 627.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:656,45,0
CP000253.1 1186521 . T G 716.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.927;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.72;ReadPosRankSum=1.527;SOR=0.618 GT:AD:DP:GQ:PL 1/1:1,32:33:51:745,51,0
CP000253.1 1186742 . C A 3135.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3164,220,0
CP000253.1 1186845 . C T 2541.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.979;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4612;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.48;ReadPosRankSum=1.191;SOR=0.309 GT:AD:DP:GQ:PL 1/1:1,95:96:99:2570,184,0
CP000253.1 1186848 . G A 2474.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2503,178,0
CP000253.1 1186920 . G A 1933.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2762;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.78;ReadPosRankSum=0.670;SOR=0.354 GT:AD:DP:GQ:PL 1/1:1,74:75:99:1962,141,0
CP000253.1 1186923 . C T 1827.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8071;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1856,132,0
CP000253.1 1186926 . C T 1878.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=1.032 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1907,138,0
CP000253.1 1187031 . A G 3704.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.951;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.06;ReadPosRankSum=-0.152;SOR=0.746 GT:AD:DP:GQ:PL 1/1:2,152:156:99:3733,220,0
CP000253.1 1187066 . A G 4335.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.935;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6833;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.31;ReadPosRankSum=-1.658;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,185:186:99:4364,301,0
CP000253.1 1187139 . T C 4836.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,205:205:99:4865,337,0
CP000253.1 1187153 . T A 4306.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4335,301,0
CP000253.1 1187154 . C T 4296.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4325,301,0
CP000253.1 1187161 . A G 4294.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.768;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.73;ReadPosRankSum=0.944;SOR=0.847 GT:AD:DP:GQ:PL 1/1:2,179:182:99:4323,301,0
CP000253.1 1187172 . A G 3594.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.411;DP=158;Dels=0.00;ExcessHet=3.0103;FS=2.256;HaplotypeScore=17.1514;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.75;ReadPosRankSum=-0.166;SOR=0.688 GT:AD:DP:GQ:PL 1/1:3,155:158:99:3623,215,0
CP000253.1 1187174 . T A 3747.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.767;DP=158;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.87;ReadPosRankSum=-0.094;SOR=0.504 GT:AD:DP:GQ:PL 1/1:2,155:157:99:3776,262,0
CP000253.1 1187175 . C A 3727.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=44.6626;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,154:155:99:3756,262,0
CP000253.1 1187184 . T A 3820.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1139;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3849,268,0
CP000253.1 1187185 . T C 3696.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,157:158:99:3725,259,0
CP000253.1 1187186 . A T 3780.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9745;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3809,265,0
CP000253.1 1187187 . T A 3810.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.995;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.97;ReadPosRankSum=1.733;SOR=0.317 GT:AD:DP:GQ:PL 1/1:1,158:159:99:3839,265,0
CP000253.1 1187205 . A C 4252.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.76;ReadPosRankSum=-1.714;SOR=0.294 GT:AD:DP:GQ:PL 1/1:1,178:180:99:4281,298,0
CP000253.1 1187493 . A T 1178.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1207,84,0
CP000253.1 1187596 . C T 1236.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:51:90:1265,90,0
CP000253.1 1188037 . A G 3533.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3562,253,0
CP000253.1 1188130 . C T 4268.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3559;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4297,301,0
CP000253.1 1188133 . A T 4382.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4411,307,0
CP000253.1 1188142 . A T 4547.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.539;DP=189;Dels=0.00;ExcessHet=3.0103;FS=3.058;HaplotypeScore=17.0103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.06;ReadPosRankSum=-0.907;SOR=0.291 GT:AD:DP:GQ:PL 1/1:1,188:189:99:4576,322,0
CP000253.1 1188145 . T A 4540.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,188:189:99:4569,319,0
CP000253.1 1188241 . T C 4886.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9390;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,206:206:99:4915,343,0
CP000253.1 1188253 . C T 4820.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9804;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,200:201:99:4849,340,0
CP000253.1 1188296 . A T 4539.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.15;ReadPosRankSum=-1.493;SOR=0.318 GT:AD:DP:GQ:PL 1/1:1,187:188:99:4568,319,0
CP000253.1 1188346 . G A 3724.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.926;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.03;ReadPosRankSum=-1.543;SOR=0.610 GT:AD:DP:GQ:PL 1/1:1,154:155:99:3753,262,0
CP000253.1 1188547 . T G 1147.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.4679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.69;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:84:1176,84,0
CP000253.1 1188565 . A T 1109.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1138,81,0
CP000253.1 1188646 . T C 1416.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1445,102,0
CP000253.1 1188857 . T C 2354.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3105;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2383,166,0
CP000253.1 1188871 . T C 2073.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.893;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5754;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.30;ReadPosRankSum=-0.205;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,92:94:99:2102,144,0
CP000253.1 1188880 . A T 2089.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2118,147,0
CP000253.1 1188964 . G A 1041.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,41:41:75:1070,75,0
CP000253.1 1189015 . A G 788.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:57:817,57,0
CP000253.1 1189093 . T C 978.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:40:72:1007,72,0
CP000253.1 1189410 . A T 136.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:164,12,0
CP000253.1 1190292 . C T 1174.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1203,87,0
CP000253.1 1190331 . T A 1153.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1182,84,0
CP000253.1 1190397 . T A 1434.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1263;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,56:57:99:1463,102,0
CP000253.1 1191060 . C T 3150.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=1.034 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3179,226,0
CP000253.1 1191177 . G A 1777.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.982;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.69;ReadPosRankSum=0.169;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,71:72:99:1806,126,0
CP000253.1 1191285 . C T 1941.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1970,138,0
CP000253.1 1191354 . T C 2143.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,90:91:99:2172,154,0
CP000253.1 1191552 . T C 2435.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8050;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2464,175,0
CP000253.1 1192009 . G A 2550.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5003;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2579,184,0
CP000253.1 1192305 . T C 5123.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1201;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,203:204:99:5152,367,0
CP000253.1 1192515 . T C 4609.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4638,325,0
CP000253.1 1192569 . T C 4507.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2424;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4536,322,0
CP000253.1 1192584 . T C 4133.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=161;Dels=0.00;ExcessHet=3.0103;FS=3.318;HaplotypeScore=8.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.68;ReadPosRankSum=-1.711;SOR=0.467 GT:AD:DP:GQ:PL 1/1:1,160:161:99:4162,301,0
CP000253.1 1192650 . G A 3200.06 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.641;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.06;ReadPosRankSum=0.638;SOR=0.520 GT:AD:DP:GQ:PL 1/1:1,132:136:99:3228,232,0
CP000253.1 1192839 . A G 3130.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3159,226,0
CP000253.1 1192842 . A C 3152.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3181,229,0
CP000253.1 1192857 . A G 3233.06 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.759;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5242;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.87;ReadPosRankSum=-0.640;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3263,232,0
CP000253.1 1192872 . T C 3519.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3548,253,0
CP000253.1 1192881 . T C 3463.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0288;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3492,247,0
CP000253.1 1192887 . G A 3610.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3639,259,0
CP000253.1 1192911 . G A 4160.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.774;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5539;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.68;ReadPosRankSum=-0.342;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,161:162:99:4189,298,0
CP000253.1 1192950 . A G 4334.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7961;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4363,313,0
CP000253.1 1192959 . A T 4108.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3625;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4137,295,0
CP000253.1 1192977 . A G 4133.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.367;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.17;ReadPosRankSum=-0.158;SOR=0.753 GT:AD:DP:GQ:PL 1/1:2,169:172:99:4162,298,0
CP000253.1 1193265 . A G 6036.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,241:242:99:6065,430,0
CP000253.1 1193418 . C T 4717.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,190:192:99:4746,334,0
CP000253.1 1193637 . G A 2090.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.796;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.60;ReadPosRankSum=-1.204;SOR=0.453 GT:AD:DP:GQ:PL 1/1:1,84:85:99:2119,150,0
CP000253.1 1193878 . C T 1087.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:81:1116,81,0
CP000253.1 1193896 . T G 882.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:66:911,66,0
CP000253.1 1193906 . C T 1023.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:75:1052,75,0
CP000253.1 1193918 . C T 1041.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.796;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.68;ReadPosRankSum=-1.341;SOR=0.242 GT:AD:DP:GQ:PL 1/1:1,43:44:75:1070,75,0
CP000253.1 1193933 . T C 1192.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.51;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:46:87:1221,87,0
CP000253.1 1193951 . A G 1196.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:87:1225,87,0
CP000253.1 1193971 . G T 1127.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1156,81,0
CP000253.1 1194161 . A C 3040.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.056;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3786;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.94;ReadPosRankSum=1.733;SOR=0.376 GT:AD:DP:GQ:PL 1/1:1,126:127:99:3069,214,0
CP000253.1 1195416 . T C 2404.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9621;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:97:99:2433,175,0
CP000253.1 1195699 . G A 3335.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5765;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,137:138:99:3364,235,0
CP000253.1 1196084 . C T 328.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.780;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.48;ReadPosRankSum=0.497;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,13:14:27:357,27,0
CP000253.1 1196498 . T A 439.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:468,33,0
CP000253.1 1196984 . C T 2233.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0372;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2262,157,0
CP000253.1 1196996 . T C 2318.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6293;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2347,166,0
CP000253.1 1197023 . G A 2504.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9824;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2533,175,0
CP000253.1 1197260 . T A 3478.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6403;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.97;SOR=1.384 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3507,250,0
CP000253.1 1197852 . A G 3905.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.827;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0403;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.57;ReadPosRankSum=0.365;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,146:149:99:3934,280,0
CP000253.1 1199388 . T C 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 1199756 . G A 3827.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.899;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.38;ReadPosRankSum=-1.291;SOR=0.388 GT:AD:DP:GQ:PL 1/1:1,156:158:99:3856,271,0
CP000253.1 1199767 . A G 3820.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3849,268,0
CP000253.1 1199769 . C T 3777.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3806,268,0
CP000253.1 1199787 . G A 3853.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,160:160:99:3882,271,0
CP000253.1 1199793 . C T 3893.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,161:162:99:3922,274,0
CP000253.1 1199799 . C A 3831.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.971;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.56;ReadPosRankSum=0.566;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,155:156:99:3860,268,0
CP000253.1 1199805 . A G 3670.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.15;ReadPosRankSum=1.003;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,151:152:99:3699,259,0
CP000253.1 1199808 . A G 3662.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6462;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3691,259,0
CP000253.1 1199814 . T C 3533.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,149:152:99:3562,250,0
CP000253.1 1200491 . C T 1695.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.31;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1724,117,0
CP000253.1 1200593 . G A 1534.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1563,105,0
CP000253.1 1200686 . A T 231.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:260,18,0
CP000253.1 1200788 . A T 921.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.81;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,32:32:69:950,69,0
CP000253.1 1200926 . A T 3092.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3121,220,0
CP000253.1 1201196 . C T 5192.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3390;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,219:220:99:5221,364,0
CP000253.1 1202279 . T C 2304.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2333,166,0
CP000253.1 1202408 . A G 2735.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.31;ReadPosRankSum=-0.417;SOR=0.573 GT:AD:DP:GQ:PL 1/1:1,103:106:99:2764,199,0
CP000253.1 1202564 . C T 2487.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2247;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2516,181,0
CP000253.1 1202645 . G A 2344.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2373,166,0
CP000253.1 1202828 . A G 1289.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7862;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1318,93,0
CP000253.1 1202849 . A G 1154.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.409;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2575;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.10;ReadPosRankSum=1.040;SOR=0.361 GT:AD:DP:GQ:PL 1/1:1,49:50:64:1183,64,0
CP000253.1 1203242 . C T 1968.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1997,141,0
CP000253.1 1203254 . T C 1686.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1715,123,0
CP000253.1 1203407 . T C 2451.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.65;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2480,178,0
CP000253.1 1203443 . A C 2704.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2030;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,107:108:99:2733,193,0
CP000253.1 1203854 . T C 3814.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.49;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3843,274,0
CP000253.1 1203896 . T G 3415.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.316;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.12;ReadPosRankSum=0.271;SOR=0.124 GT:AD:DP:GQ:PL 1/1:2,134:137:99:3444,250,0
CP000253.1 1203899 . T C 3523.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.553;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5338;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.35;ReadPosRankSum=1.858;SOR=0.864 GT:AD:DP:GQ:PL 1/1:2,137:139:99:3552,253,0
CP000253.1 1204031 . A G 3145.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3174,226,0
CP000253.1 1204097 . A T 3087.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=1.046 GT:AD:DP:GQ:PL 1/1:0,123:125:99:3116,223,0
CP000253.1 1204163 . T A 2190.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2219,160,0
CP000253.1 1204169 . T C 2133.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2162,154,0
CP000253.1 1204239 . C T 190.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:219,15,0
CP000253.1 1204254 . C T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1204257 . G A 189.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:218,15,0
CP000253.1 1204304 . T A 253.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.15;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:282,21,0
CP000253.1 1204788 . T C 1298.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:53:93:1327,93,0
CP000253.1 1204797 . T C 1705.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4732;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,70:71:99:1734,123,0
CP000253.1 1205061 . G A 4761.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4234;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,203:205:99:4790,331,0
CP000253.1 1205112 . A T 3956.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.28;ReadPosRankSum=-1.029;SOR=0.356 GT:AD:DP:GQ:PL 1/1:1,169:173:99:3985,280,0
CP000253.1 1205511 . A G 1057.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1086,75,0
CP000253.1 1205658 . A G 798.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:57:827,57,0
CP000253.1 1205739 . A G 799.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=23.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:57:828,57,0
CP000253.1 1205760 . C T 1560.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4702;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=24.01;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1589,111,0
CP000253.1 1205838 . T A 2372.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6382;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=23.49;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2401,166,0
CP000253.1 1205877 . A T 2467.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3990;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=23.28;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2496,175,0
CP000253.1 1205967 . G A 2765.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9812;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=22.67;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2794,193,0
CP000253.1 1206009 . A G 2024.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6225;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=23.27;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2053,141,0
CP000253.1 1206137 . T C 652.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,26:26:48:681,48,0
CP000253.1 1206182 . A G 551.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.59;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:42:580,42,0
CP000253.1 1206394 . A G 1256.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.05;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:87:1285,87,0
CP000253.1 1206417 . G A 1256.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:87:1285,87,0
CP000253.1 1206510 . A C 858.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:887,60,0
CP000253.1 1206741 . G A 1230.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1259,87,0
CP000253.1 1206768 . C T 992.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1021,69,0
CP000253.1 1206795 . C T 808.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:57:837,57,0
CP000253.1 1206909 . A T 2021.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.73;SOR=2.105 GT:AD:DP:GQ:PL 1/1:0,68:69:99:2050,147,0
CP000253.1 1207014 . A G 3480.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3092;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=1.123 GT:AD:DP:GQ:PL 1/1:0,142:144:99:3509,247,0
CP000253.1 1207147 . A T 5061.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.76;ReadPosRankSum=1.619;SOR=0.533 GT:AD:DP:GQ:PL 1/1:1,212:213:99:5090,355,0
CP000253.1 1207233 . A G 5594.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.569;DP=212;Dels=0.00;ExcessHet=3.0103;FS=3.442;HaplotypeScore=16.7988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.52;ReadPosRankSum=2.311;SOR=0.579 GT:AD:DP:GQ:PL 1/1:2,209:212:99:5623,387,0
CP000253.1 1207380 . G A 5280.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0720;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=1.004 GT:AD:DP:GQ:PL 1/1:0,204:204:99:5309,376,0
CP000253.1 1207575 . G A 2351.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2380,166,0
CP000253.1 1207590 . T C 2046.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.876;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1619;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.80;ReadPosRankSum=-0.787;SOR=0.489 GT:AD:DP:GQ:PL 1/1:1,85:86:99:2075,144,0
CP000253.1 1207902 . C T 1342.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:57:96:1371,96,0
CP000253.1 1208013 . C T 1367.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6743;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1396,99,0
CP000253.1 1208163 . T C 2999.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3028,214,0
CP000253.1 1208196 . A G 3316.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.951;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.12;ReadPosRankSum=1.133;SOR=0.870 GT:AD:DP:GQ:PL 1/1:1,126:127:99:3345,238,0
CP000253.1 1208205 . G A 3527.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8244;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.14;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3556,253,0
CP000253.1 1208253 . T C 4178.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5016;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4207,301,0
CP000253.1 1208268 . A T 4301.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.89;SOR=1.319 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4330,310,0
CP000253.1 1208373 . C T 5156.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7869;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,210:210:99:5185,364,0
CP000253.1 1208935 . G A 2320.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2349,163,0
CP000253.1 1209211 . T A 2212.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2241,157,0
CP000253.1 1209253 . T C 1846.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1875,132,0
CP000253.1 1209355 . T C 1030.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6676;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=24.54;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:43:75:1059,75,0
CP000253.1 1209363 . C T 860.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2804;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=25.32;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:889,63,0
CP000253.1 1209580 . A T 766.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:57:795,57,0
CP000253.1 1210285 . C G 3461.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4775;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,150:151:99:3490,241,0
CP000253.1 1211001 . C T 765.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:54:794,54,0
CP000253.1 1211178 . G A 222.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.85;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:251,18,0
CP000253.1 1211228 . A G 511.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.10;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:39:540,39,0
CP000253.1 1211352 . C T 1758.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1787,123,0
CP000253.1 1211359 . G A 1851.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1880,129,0
CP000253.1 1211364 . T A 1886.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.979;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.01;ReadPosRankSum=1.249;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,81:82:99:1915,132,0
CP000253.1 1211369 . C A 2104.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2133,147,0
CP000253.1 1211715 . T C 433.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:33:462,33,0
CP000253.1 1212666 . C T 1118.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1147,81,0
CP000253.1 1212680 . T C 1069.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,41:41:78:1098,78,0
CP000253.1 1213096 . A T 2077.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.518;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.64;ReadPosRankSum=-0.432;SOR=0.397 GT:AD:DP:GQ:PL 1/1:3,93:96:99:2106,106,0
CP000253.1 1213105 . A T 2558.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.096;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1446;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.64;ReadPosRankSum=-1.309;SOR=0.711 GT:AD:DP:GQ:PL 1/1:2,111:113:99:2587,139,0
CP000253.1 1214479 . C T 2840.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2869,196,0
CP000253.1 1214804 . G A 205.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:18:234,18,0
CP000253.1 1214807 . A C 187.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:18:216,18,0
CP000253.1 1214812 . C G 211.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:18:240,18,0
CP000253.1 1214816 . A T 205.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:18:234,18,0
CP000253.1 1214864 . A G 332.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.25;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:12:27:361,27,0
CP000253.1 1215075 . C T 871.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:63:900,63,0
CP000253.1 1215288 . A G 1479.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1508,105,0
CP000253.1 1215923 . T C 173.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:202,15,0
CP000253.1 1216018 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 1216179 . G A 544.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.24;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:42:573,42,0
CP000253.1 1218834 . T C 4308.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,165:168:99:4337,313,0
CP000253.1 1219230 . T C 2260.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2289,163,0
CP000253.1 1219237 . G A 2170.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9913;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.83;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,78:79:99:2199,157,0
CP000253.1 1219268 . T G 1524.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=1.453 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1553,111,0
CP000253.1 1219277 . A G 897.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,33:33:66:926,66,0
CP000253.1 1219353 . A T 261.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.09;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:21:290,21,0
CP000253.1 1219390 . T G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1219393 . G C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1219401 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1220473 . T C 2904.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:129:99:2933,205,0
CP000253.1 1221338 . T C 1304.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.528;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.30;ReadPosRankSum=0.867;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,55:56:96:1333,96,0
CP000253.1 1221354 . T G 1439.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:56:99:1468,105,0
CP000253.1 1221698 . C T 3130.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.823;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.05;ReadPosRankSum=-1.469;SOR=0.348 GT:AD:DP:GQ:PL 1/1:1,124:125:99:3159,223,0
CP000253.1 1221794 . T A 2218.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:88:99:2247,157,0
CP000253.1 1221809 . A T 2078.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,81:82:99:2107,147,0
CP000253.1 1221845 . A C 1709.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1738,123,0
CP000253.1 1221885 . C T 1151.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0364;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:48:84:1180,84,0
CP000253.1 1221944 . T C 1292.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1321,93,0
CP000253.1 1222035 . G A 2390.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2419,169,0
CP000253.1 1223035 . T C 2641.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2670,187,0
CP000253.1 1224921 . G T 1284.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1313,90,0
CP000253.1 1225314 . A T 4213.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.437;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1265;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.41;ReadPosRankSum=1.438;SOR=0.715 GT:AD:DP:GQ:PL 1/1:2,186:189:99:4242,292,0
CP000253.1 1225383 . G A 3107.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.804;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1975;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.37;ReadPosRankSum=-0.018;SOR=0.873 GT:AD:DP:GQ:PL 1/1:2,131:133:99:3136,217,0
CP000253.1 1225459 . A G 1624.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1653,117,0
CP000253.1 1225521 . C A 973.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:72:1002,72,0
CP000253.1 1225716 . G A 2460.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2690;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2489,172,0
CP000253.1 1226111 . G A 2119.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4838;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.85;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2148,150,0
CP000253.1 1226171 . T C 1992.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2021,141,0
CP000253.1 1226274 . T C 1541.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9762;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=1.278 GT:AD:DP:GQ:PL 1/1:0,58:59:99:1570,111,0
CP000253.1 1226575 . A T 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=3.71;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:32:39,0,32
CP000253.1 1226613 . A G 137.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:165,12,0
CP000253.1 1227802 . T G 1243.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1272,87,0
CP000253.1 1228801 . A G 3749.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,161:161:99:3778,259,0
CP000253.1 1229020 . T C 1189.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2429;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1218,87,0
CP000253.1 1229198 . A G 696.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:725,51,0
CP000253.1 1229836 . C T 984.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:69:1013,69,0
CP000253.1 1229845 . A T 1203.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1232,84,0
CP000253.1 1230253 . C T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1230262 . T A 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 1230350 . C T 227.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:256,18,0
CP000253.1 1230446 . C T 456.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:33:485,33,0
CP000253.1 1230456 . A C 494.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:523,36,0
CP000253.1 1230536 . G A 498.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.69;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:527,36,0
CP000253.1 1230646 . T G 1080.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.06;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:75:1109,75,0
CP000253.1 1230648 . G A 1086.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.18;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:75:1115,75,0
CP000253.1 1230650 . A G 1077.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.00;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:75:1106,75,0
CP000253.1 1230653 . A T 1068.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:75:1097,75,0
CP000253.1 1230766 . A C 719.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:51:748,51,0
CP000253.1 1230778 . A G 759.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:34:54:788,54,0
CP000253.1 1230880 . G A 274.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:303,21,0
CP000253.1 1230934 . A G 318.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:347,24,0
CP000253.1 1230949 . C T 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 1231069 . T C 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 1231117 . C T 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 1231165 . C T 173.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:202,15,0
CP000253.1 1231401 . C T 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1231692 . T G 670.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:48:699,48,0
CP000253.1 1231845 . T A 765.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:54:794,54,0
CP000253.1 1231951 . C T 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 1231953 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1231963 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1231969 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1231976 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1231983 . A C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1232095 . G T 137.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.41;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:165,12,0
CP000253.1 1232096 . A G 126.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:154,12,0
CP000253.1 1232116 . T G 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 1232117 . A C 88.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:116,9,0
CP000253.1 1232124 . G A 85.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0
CP000253.1 1233505 . T A 2540.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2569,178,0
CP000253.1 1233932 . G C 2457.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2486,178,0
CP000253.1 1233937 . G A 2397.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.968;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.24;ReadPosRankSum=1.368;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2426,172,0
CP000253.1 1233944 . G A 2589.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2618,187,0
CP000253.1 1234000 . A T 2532.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.963;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2491;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=-0.113;QD=23.45;ReadPosRankSum=0.963;SOR=0.556 GT:AD:DP:GQ:PL 1/1:3,105:109:99:2561,187,0
CP000253.1 1234049 . C T 2938.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5670;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=24.90;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2967,211,0
CP000253.1 1234427 . C T 3241.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0080;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.94;ReadPosRankSum=0.973;SOR=0.398 GT:AD:DP:GQ:PL 1/1:1,129:131:99:3270,232,0
CP000253.1 1234615 . G A 2843.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2872,205,0
CP000253.1 1234846 . G A 524.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:39:553,39,0
CP000253.1 1235141 . G A 1638.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1667,114,0
CP000253.1 1235627 . T C 1302.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1331,96,0
CP000253.1 1236733 . G A 493.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.05;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:39:522,39,0
CP000253.1 1237493 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1237761 . C A 1122.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:78:1151,78,0
CP000253.1 1237803 . C T 1209.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:84:1238,84,0
CP000253.1 1237815 . C T 1432.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1461,99,0
CP000253.1 1239353 . A T 2305.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2334,160,0
CP000253.1 1239365 . G A 2288.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.22;ReadPosRankSum=-0.674;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,102:103:99:2317,160,0
CP000253.1 1239574 . T A 296.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:325,24,0
CP000253.1 1239606 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:175,12,0
CP000253.1 1240132 . C T 2276.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2305,160,0
CP000253.1 1241332 . T C 1906.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2934;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1935,135,0
CP000253.1 1242211 . T C 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1242834 . C A 1194.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1223,84,0
CP000253.1 1243203 . A G 4793.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1889;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,191:195:99:4822,343,0
CP000253.1 1243764 . A G 2580.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.951;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5865;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.82;ReadPosRankSum=-1.200;SOR=0.344 GT:AD:DP:GQ:PL 1/1:1,103:104:99:2609,184,0
CP000253.1 1244109 . C A 747.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:776,54,0
CP000253.1 1244194 . A G 921.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5540;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:66:950,66,0
CP000253.1 1244677 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1244703 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1244764 . A G 271.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.41;ReadPosRankSum=-0.751;SOR=0.283 GT:AD:DP:GQ:PL 1/1:1,13:14:21:300,21,0
CP000253.1 1244766 . A G 316.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:345,24,0
CP000253.1 1244898 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1244964 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1244998 . G A 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 1245102 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1245109 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1245158 . C A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1245627 . A G 47.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:75,6,0
CP000253.1 1245746 . G T 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 1245795 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1245829 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1245879 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1245883 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1245900 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1245951 . T A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1245965 . G C 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1245969 . A G 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1246034 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1246043 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1246122 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1246149 . T A 96.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:124,9,0
CP000253.1 1246426 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1246436 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1246445 . A T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1246624 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1246835 . G C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1247107 . T G 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1247129 . C A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1247134 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1247138 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1247175 . A T 51.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:79,6,0
CP000253.1 1247204 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1247219 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1247238 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1247254 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1247274 . C A 101.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:129,9,0
CP000253.1 1247280 . A C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1247289 . A G 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1247331 . A T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1247336 . C G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1247346 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1247352 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1247417 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1247425 . A C 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 1247432 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1247460 . A T 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 1247464 . C A 94.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:122,9,0
CP000253.1 1247510 . A G 90.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:118,9,0
CP000253.1 1247579 . C T 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 1247677 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1247684 . A C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1247743 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1247780 . G C 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:4:6:85,6,0
CP000253.1 1247828 . G A 96.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:124,9,0
CP000253.1 1247832 . G T 92.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:120,9,0
CP000253.1 1247858 . A G 86.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:7:9:114,9,0
CP000253.1 1247883 . A T 144.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.534;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.00;ReadPosRankSum=-0.157;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,7:8:12:172,12,0
CP000253.1 1247941 . G T 186.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:215,15,0
CP000253.1 1247960 . T C 266.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:295,21,0
CP000253.1 1247966 . A T 264.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:293,21,0
CP000253.1 1248016 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:7:9:134,9,0
CP000253.1 1248019 . C A 106.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6819;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.18;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:9:134,9,0
CP000253.1 1248126 . C A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1248131 . C A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1248163 . C A 145.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.534;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.13;ReadPosRankSum=0.489;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,7:8:12:173,12,0
CP000253.1 1248168 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:6:90,6,0
CP000253.1 1248181 . G T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1248360 . C T 185.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:214,15,0
CP000253.1 1248790 . G A 257.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.71;MQ0=0;QD=19.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:286,21,0
CP000253.1 1248865 . A T 208.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.67;MQ0=0;QD=20.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:237,18,0
CP000253.1 1248941 . C T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1248951 . C T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 1248963 . T A 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 1248983 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1250625 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.41;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1250627 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.41;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1250637 . T A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.41;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1250657 . A G 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.41;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1250682 . T A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=43.31;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1250690 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=43.31;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1251319 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1251340 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1251342 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1251347 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1251360 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1251361 . T A 52.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:80,6,0
CP000253.1 1251364 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1251368 . A C 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 1251383 . T A 97.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:125,9,0
CP000253.1 1251384 . G A 91.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:119,9,0
CP000253.1 1251403 . T C 92.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:120,9,0
CP000253.1 1251424 . A C 90.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:118,9,0
CP000253.1 1251430 . A C 62.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:6:90,6,0
CP000253.1 1251438 . C T 61.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.35;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:6:89,6,0
CP000253.1 1251441 . T C 88.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:116,9,0
CP000253.1 1251459 . G T 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 1251467 . A G 130.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:158,12,0
CP000253.1 1251491 . A T 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1251523 . T C 135.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:163,12,0
CP000253.1 1251528 . T A 144.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:172,12,0
CP000253.1 1251547 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1251607 . G A 48.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:76,6,0
CP000253.1 1251650 . A G 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 1251857 . T A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1251907 . G A 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1251936 . C T 408.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.51;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:437,30,0
CP000253.1 1251940 . A C 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 1251959 . C T 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 1252086 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1252103 . C A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1252111 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1252115 . C A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1252122 . G T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1252149 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1252168 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1252192 . G C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 1252274 . C T 172.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.82;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:201,15,0
CP000253.1 1252314 . A T 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 1252323 . C T 179.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:208,15,0
CP000253.1 1252336 . A C 123.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;DP=7;Dels=0.00;ExcessHet=3.0103;FS=3.680;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.68;ReadPosRankSum=-1.465;SOR=1.108 GT:AD:DP:GQ:PL 0/1:1,6:7:24:152,0,24
CP000253.1 1252347 . T A 265.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:294,21,0
CP000253.1 1252384 . A G 215.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:244,18,0
CP000253.1 1252385 . C T 245.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:274,21,0
CP000253.1 1252395 . T C 355.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:384,27,0
CP000253.1 1252429 . A G 464.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4715;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:493,36,0
CP000253.1 1252456 . A G 563.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:592,42,0
CP000253.1 1252741 . C T 828.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:60:857,60,0
CP000253.1 1252882 . G A 1615.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1644,114,0
CP000253.1 1252987 . T A 2096.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2125,147,0
CP000253.1 1253158 . G A 1836.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5188;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.96;ReadPosRankSum=-0.152;SOR=0.426 GT:AD:DP:GQ:PL 1/1:1,79:83:99:1865,129,0
CP000253.1 1253287 . G A 1934.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4250;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1963,135,0
CP000253.1 1253422 . G A 890.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:66:919,66,0
CP000253.1 1253428 . A G 882.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:37:63:911,63,0
CP000253.1 1253460 . A G 308.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.06;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:15:24:337,24,0
CP000253.1 1253471 . A T 217.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:246,18,0
CP000253.1 1253479 . C T 183.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:212,15,0
CP000253.1 1253514 . A G 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1253520 . G T 141.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:169,12,0
CP000253.1 1253585 . T A 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 1253604 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1253906 . C T 235.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:12:18:264,18,0
CP000253.1 1253965 . T A 273.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:302,21,0
CP000253.1 1253978 . C T 265.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.45;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:294,21,0
CP000253.1 1253990 . G A 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1253991 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1253993 . A T 222.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:251,18,0
CP000253.1 1253999 . T C 230.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:259,18,0
CP000253.1 1254071 . G A 466.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:36:495,36,0
CP000253.1 1254173 . C T 663.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1557;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:692,48,0
CP000253.1 1254572 . T C 701.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,26:26:54:730,54,0
CP000253.1 1254581 . G A 827.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.70;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:60:856,60,0
CP000253.1 1254590 . A C 742.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:57:771,57,0
CP000253.1 1254614 . A T 814.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6213;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:60:843,60,0
CP000253.1 1254623 . G C 752.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.81;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:39:54:781,54,0
CP000253.1 1254629 . G A 871.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6557;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:66:900,66,0
CP000253.1 1254636 . A C 835.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:39:60:864,60,0
CP000253.1 1254638 . A T 899.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:66:928,66,0
CP000253.1 1254647 . T C 1051.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:48:75:1080,75,0
CP000253.1 1254734 . A T 1551.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0696;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:63:99:1580,111,0
CP000253.1 1254738 . T C 1553.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9426;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,61:63:99:1582,114,0
CP000253.1 1254743 . A G 1538.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1270;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1567,111,0
CP000253.1 1254842 . A G 2140.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7153;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=24.61;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2169,153,0
CP000253.1 1254923 . G A 1832.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1861,129,0
CP000253.1 1254950 . C T 1966.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4648;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,83:84:99:1995,138,0
CP000253.1 1254974 . T C 1909.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,75:76:99:1938,135,0
CP000253.1 1254977 . A T 1912.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1941,135,0
CP000253.1 1254983 . A G 1904.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1933,135,0
CP000253.1 1254986 . T G 1861.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1890,132,0
CP000253.1 1254995 . A G 1911.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1940,135,0
CP000253.1 1255001 . A G 1905.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1934,135,0
CP000253.1 1255004 . A T 1908.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1937,135,0
CP000253.1 1255022 . T C 1979.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2008,141,0
CP000253.1 1255049 . T A 1528.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7604;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1557,108,0
CP000253.1 1255070 . A T 1458.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1487,102,0
CP000253.1 1255074 . T C 1505.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1534,105,0
CP000253.1 1255103 . A T 1270.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1299,90,0
CP000253.1 1255109 . A T 1223.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0989;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1252,87,0
CP000253.1 1255310 . A G 491.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.49;ReadPosRankSum=0.145;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,23:24:36:520,36,0
CP000253.1 1255520 . T C 136.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:164,12,0
CP000253.1 1256332 . A G 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=2.78;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:39:39,0,39
CP000253.1 1257167 . C T 177.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:206,15,0
CP000253.1 1257847 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1259729 . C T 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1259955 . A C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1260122 . C T 1395.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:62:96:1424,96,0
CP000253.1 1260140 . T G 1343.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:93:1372,93,0
CP000253.1 1260269 . C A 504.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.95;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:533,36,0
CP000253.1 1260293 . C T 488.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:517,36,0
CP000253.1 1260440 . T C 935.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:964,66,0
CP000253.1 1260497 . G A 1175.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3784;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1204,84,0
CP000253.1 1260692 . G T 795.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:57:824,57,0
CP000253.1 1260758 . G A 687.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.51;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:51:716,51,0
CP000253.1 1262299 . A G 735.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:54:764,54,0
CP000253.1 1262302 . G A 787.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:57:816,57,0
CP000253.1 1262926 . T A 128.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:156,12,0
CP000253.1 1263270 . A G 320.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:349,24,0
CP000253.1 1264436 . C A 827.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:60:856,60,0
CP000253.1 1264836 . C T 1097.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.679;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3939;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.40;ReadPosRankSum=0.709;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,48:49:57:1126,57,0
CP000253.1 1265154 . C A 3545.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,136:138:99:3574,253,0
CP000253.1 1265193 . A G 3547.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3576,259,0
CP000253.1 1265571 . G A 3036.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4472;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3065,217,0
CP000253.1 1265720 . C A 2998.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7424;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3027,211,0
CP000253.1 1266006 . A T 4822.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,194:195:99:4851,343,0
CP000253.1 1266210 . A T 4947.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,198:199:99:4976,352,0
CP000253.1 1266355 . T A 5310.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5171;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=0.120;SOR=0.373 GT:AD:DP:GQ:PL 1/1:1,216:217:99:5339,373,0
CP000253.1 1266863 . C T 963.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:69:992,69,0
CP000253.1 1267048 . T C 2672.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2701,187,0
CP000253.1 1267318 . C T 4212.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4649;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4241,292,0
CP000253.1 1267386 . C T 3832.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6612;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.11;ReadPosRankSum=-0.828;SOR=0.556 GT:AD:DP:GQ:PL 1/1:1,158:161:99:3861,268,0
CP000253.1 1267481 . A G 2014.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2043,141,0
CP000253.1 1267498 . T C 1629.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6248;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:73:99:1658,114,0
CP000253.1 1267609 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:12:175,12,0
CP000253.1 1267739 . A G 336.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:365,27,0
CP000253.1 1267993 . A G 777.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:806,54,0
CP000253.1 1268206 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1268356 . A G 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 1268358 . G A 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 1270176 . C T 1173.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9066;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1202,84,0
CP000253.1 1271019 . C T 2395.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2424,172,0
CP000253.1 1271917 . A G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1272519 . T C 1242.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1271,87,0
CP000253.1 1273066 . C A 794.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:60:823,60,0
CP000253.1 1273307 . T C 2657.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.2952;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2686,190,0
CP000253.1 1274282 . A T 846.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:38:60:875,60,0
CP000253.1 1274396 . A T 825.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:60:854,60,0
CP000253.1 1274423 . C A 1058.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0384;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.06;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:75:1087,75,0
CP000253.1 1274688 . C T 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 1274693 . G T 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 1274694 . A T 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 1274878 . A G 223.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:252,18,0
CP000253.1 1274983 . T A 261.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:290,21,0
CP000253.1 1275022 . C T 307.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:336,24,0
CP000253.1 1275109 . T G 2627.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.802;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.05;ReadPosRankSum=-1.251;SOR=0.423 GT:AD:DP:GQ:PL 1/1:1,113:114:99:2656,184,0
CP000253.1 1275331 . G A 1954.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:86:99:1983,138,0
CP000253.1 1275367 . T C 1350.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1379,96,0
CP000253.1 1275385 . T A 1285.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0012;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:54:93:1314,93,0
CP000253.1 1275520 . G T 1081.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5566;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:49:78:1110,78,0
CP000253.1 1275544 . G A 902.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:40:66:931,66,0
CP000253.1 1275620 . G A 503.56 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.956;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.65;ReadPosRankSum=1.350;SOR=0.941 GT:AD:DP:GQ:PL 1/1:2,25:28:7:531,7,0
CP000253.1 1275728 . T C 144.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:172,12,0
CP000253.1 1275729 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.18;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:9:134,9,0
CP000253.1 1275730 . A C 144.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:172,12,0
CP000253.1 1275793 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1275818 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1275917 . A G 680.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.96;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:32:48:709,48,0
CP000253.1 1276016 . A G 503.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.15;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:36:532,36,0
CP000253.1 1276122 . A G 266.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:295,21,0
CP000253.1 1276747 . T G 1499.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1528,105,0
CP000253.1 1276852 . T C 1701.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:76:99:1730,120,0
CP000253.1 1276873 . A T 1841.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1870,129,0
CP000253.1 1276894 . C T 1829.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1858,126,0
CP000253.1 1277728 . T A 3017.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.79;ReadPosRankSum=0.696;SOR=0.380 GT:AD:DP:GQ:PL 1/1:1,116:117:99:3046,217,0
CP000253.1 1277980 . G A 5299.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6311;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,213:213:99:5328,373,0
CP000253.1 1278001 . C T 5447.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,210:210:99:5476,385,0
CP000253.1 1278124 . A T 4875.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.755;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9872;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.26;ReadPosRankSum=1.569;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,200:203:99:4904,349,0
CP000253.1 1278286 . A G 3443.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.213 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3472,250,0
CP000253.1 1278505 . A T 596.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5707;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:25:45:625,45,0
CP000253.1 1279128 . G A 225.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:254,18,0
CP000253.1 1279131 . T C 142.03 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.75;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:9:12:170,12,0
CP000253.1 1280070 . T G 1401.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2695;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.25;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1430,99,0
CP000253.1 1280563 . G T 1496.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.953;DP=66;Dels=0.00;ExcessHet=3.0103;FS=4.412;HaplotypeScore=13.2386;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.68;ReadPosRankSum=0.939;SOR=0.787 GT:AD:DP:GQ:PL 1/1:2,64:66:99:1525,111,0
CP000253.1 1280799 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:5:6:90,6,0
CP000253.1 1281526 . G C 871.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.35;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:63:900,63,0
CP000253.1 1281612 . T A 834.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.97;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:38:60:863,60,0
CP000253.1 1281631 . G C 790.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8614;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:57:819,57,0
CP000253.1 1281642 . A G 703.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:732,51,0
CP000253.1 1281707 . C T 276.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:13:21:305,21,0
CP000253.1 1281743 . T A 50.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:78,6,0
CP000253.1 1281798 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=7.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:41,3,0
CP000253.1 1281837 . C A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1281840 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1281858 . G C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1281860 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1281897 . A C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1282047 . T C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1282070 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 1282144 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1282151 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1282186 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1282208 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1282234 . C G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1282390 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1282396 . T A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1282424 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1282435 . A T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1282494 . T G 508.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:537,36,0
CP000253.1 1282614 . T A 767.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.33;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:796,54,0
CP000253.1 1282710 . T C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1283055 . T C 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1283106 . G A 419.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:448,30,0
CP000253.1 1283145 . T C 508.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:537,36,0
CP000253.1 1283158 . G A 598.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:42:627,42,0
CP000253.1 1283271 . T C 594.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:623,42,0
CP000253.1 1283321 . T A 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1283330 . G A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1283460 . A T 228.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:257,18,0
CP000253.1 1283553 . T C 538.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:567,39,0
CP000253.1 1284072 . T C 357.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:386,27,0
CP000253.1 1284303 . A G 763.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9993;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:54:792,54,0
CP000253.1 1284570 . A C 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 1285543 . A T 3408.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7590;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3437,247,0
CP000253.1 1285618 . T C 4167.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.814;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3602;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.82;ReadPosRankSum=1.654;SOR=0.232 GT:AD:DP:GQ:PL 1/1:1,174:176:99:4196,295,0
CP000253.1 1285834 . T A 3447.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3476,247,0
CP000253.1 1286020 . C T 3123.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3152,220,0
CP000253.1 1286274 . G A 357.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:386,27,0
CP000253.1 1286290 . T A 224.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:18:253,18,0
CP000253.1 1286448 . A C 230.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:259,18,0
CP000253.1 1286463 . G A 352.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4604;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:381,27,0
CP000253.1 1286488 . T A 343.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:372,27,0
CP000253.1 1286489 . T C 313.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.206;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.92;ReadPosRankSum=-1.958;SOR=1.179 GT:AD:DP:GQ:PL 1/1:2,13:15:24:342,24,0
CP000253.1 1286503 . C A 357.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:386,27,0
CP000253.1 1286511 . A C 401.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.039;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.63;ReadPosRankSum=-0.920;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,16:17:30:430,30,0
CP000253.1 1286538 . G A 588.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.981;DP=130;Dels=0.00;ExcessHet=3.0103;FS=5.291;HaplotypeScore=45.0717;MLEAC=1;MLEAF=0.500;MQ=34.01;MQ0=2;MQRankSum=7.857;QD=4.53;ReadPosRankSum=8.194;SOR=1.218 GT:AD:DP:GQ:PL 0/1:103,27:130:99:617,0,558
CP000253.1 1286540 . T C 205.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.056;DP=134;Dels=0.00;ExcessHet=3.0103;FS=4.177;HaplotypeScore=47.9798;MLEAC=1;MLEAF=0.500;MQ=34.74;MQ0=2;MQRankSum=-6.808;QD=1.55;ReadPosRankSum=-5.680;SOR=0.804 GT:AD:DP:GQ:PL 0/1:73,60:134:99:234,0,1052
CP000253.1 1286549 . A G 739.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.190;DP=145;Dels=0.00;ExcessHet=3.0103;FS=8.280;HaplotypeScore=100.2015;MLEAC=1;MLEAF=0.500;MQ=35.64;MQ0=2;MQRankSum=8.553;QD=5.10;ReadPosRankSum=4.054;SOR=1.336 GT:AD:DP:GQ:PL 0/1:111,34:145:99:768,0,692
CP000253.1 1286556 . A G 658.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.456;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=72.0509;MLEAC=1;MLEAF=0.500;MQ=37.98;MQ0=2;MQRankSum=-0.836;QD=3.41;ReadPosRankSum=-1.344;SOR=0.717 GT:AD:DP:GQ:PL 0/1:126,67:195:99:687,0,1631
CP000253.1 1286591 . G T 385.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.238;DP=249;Dels=0.00;ExcessHet=3.0103;FS=6.378;HaplotypeScore=14.0057;MLEAC=1;MLEAF=0.500;MQ=36.73;MQ0=7;MQRankSum=-6.590;QD=1.56;ReadPosRankSum=3.863;SOR=0.530 GT:AD:DP:GQ:PL 0/1:166,81:249:99:414,0,2807
CP000253.1 1286607 . G A 247.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.232;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2243;MLEAC=1;MLEAF=0.500;MQ=36.38;MQ0=7;MQRankSum=2.887;QD=1.00;ReadPosRankSum=-0.955;SOR=0.708 GT:AD:DP:GQ:PL 0/1:223,26:249:99:276,0,2939
CP000253.1 1286630 . T C 703.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.296;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=138.5155;MLEAC=1;MLEAF=0.500;MQ=36.08;MQ0=9;MQRankSum=-1.777;QD=2.84;ReadPosRankSum=-4.439;SOR=0.675 GT:AD:DP:GQ:PL 0/1:182,66:249:99:732,0,2539
CP000253.1 1286708 . C T 95.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.082;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.808;HaplotypeScore=25.5373;MLEAC=1;MLEAF=0.500;MQ=36.51;MQ0=6;MQRankSum=2.399;QD=0.38;ReadPosRankSum=-1.824;SOR=0.760 GT:AD:DP:GQ:PL 0/1:224,25:250:99:124,0,3952
CP000253.1 1286717 . A G 70.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.781;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.842;HaplotypeScore=25.3748;MLEAC=1;MLEAF=0.500;MQ=36.67;MQ0=6;MQRankSum=2.464;QD=0.28;ReadPosRankSum=-2.548;SOR=0.874 GT:AD:DP:GQ:PL 0/1:226,24:250:99:99,0,4016
CP000253.1 1286720 . A G 80.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.422;DP=250;Dels=0.00;ExcessHet=3.0103;FS=1.872;HaplotypeScore=26.4061;MLEAC=1;MLEAF=0.500;MQ=36.67;MQ0=6;MQRankSum=2.278;QD=0.33;ReadPosRankSum=-2.654;SOR=0.978 GT:AD:DP:GQ:PL 0/1:225,23:250:99:109,0,3962
CP000253.1 1286754 . T G 747.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.210;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=51.5331;MLEAC=1;MLEAF=0.500;MQ=37.18;MQ0=2;MQRankSum=-3.860;QD=4.67;ReadPosRankSum=-5.800;SOR=0.786 GT:AD:DP:GQ:PL 0/1:96,64:163:99:776,0,1753
CP000253.1 1286757 . G A 321.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.247;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=53.0558;MLEAC=1;MLEAF=0.500;MQ=37.22;MQ0=2;MQRankSum=-2.773;QD=2.05;ReadPosRankSum=5.416;SOR=0.644 GT:AD:DP:GQ:PL 0/1:117,40:160:99:350,0,2167
CP000253.1 1286777 . G T 281.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.486;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.710;HaplotypeScore=30.8984;MLEAC=1;MLEAF=0.500;MQ=35.53;MQ0=5;MQRankSum=-2.689;QD=1.82;ReadPosRankSum=4.474;SOR=0.595 GT:AD:DP:GQ:PL 0/1:117,38:156:99:310,0,2068
CP000253.1 1286826 . A T 773.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.185;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.846;HaplotypeScore=13.5530;MLEAC=1;MLEAF=0.500;MQ=37.97;MQ0=9;MQRankSum=-2.340;QD=6.85;ReadPosRankSum=-3.283;SOR=0.358 GT:AD:DP:GQ:PL 0/1:64,49:113:99:802,0,1085
CP000253.1 1286898 . T C 548.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6817;MLEAC=2;MLEAF=1.00;MQ=52.66;MQ0=0;QD=20.32;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:42:577,42,0
CP000253.1 1286903 . T C 589.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0174;MLEAC=2;MLEAF=1.00;MQ=52.66;MQ0=0;QD=23.59;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:27:45:618,45,0
CP000253.1 1286937 . A G 331.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.65;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:27:360,27,0
CP000253.1 1286958 . G A 307.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:24:336,24,0
CP000253.1 1288891 . A G 3609.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3638,259,0
CP000253.1 1289891 . T C 768.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,30:30:57:797,57,0
CP000253.1 1290560 . A G 664.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:693,48,0
CP000253.1 1291098 . C T 2392.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1690;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2421,172,0
CP000253.1 1291204 . T C 1586.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1615,120,0
CP000253.1 1291243 . A G 831.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1910;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:63:860,63,0
CP000253.1 1291777 . T G 1382.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:96:1411,96,0
CP000253.1 1292621 . A G 3769.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3798,268,0
CP000253.1 1292772 . T C 2836.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,118:119:99:2865,202,0
CP000253.1 1293207 . G A 2319.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,92:95:99:2348,166,0
CP000253.1 1293951 . A G 4661.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.935;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6460;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.34;ReadPosRankSum=-1.149;SOR=0.603 GT:AD:DP:GQ:PL 1/1:1,183:184:99:4690,331,0
CP000253.1 1295255 . C T 2293.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2322,163,0
CP000253.1 1295303 . A T 2995.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2418;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3024,208,0
CP000253.1 1295366 . C T 3490.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8188;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3519,241,0
CP000253.1 1295425 . A T 3367.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3396,235,0
CP000253.1 1295486 . T C 2882.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:125:99:2911,205,0
CP000253.1 1295777 . A G 1879.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1908,135,0
CP000253.1 1295921 . A G 2197.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.722;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6889;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.43;ReadPosRankSum=1.487;SOR=0.321 GT:AD:DP:GQ:PL 1/1:1,97:98:99:2226,156,0
CP000253.1 1296714 . T G 133.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:161,12,0
CP000253.1 1296786 . G T 492.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.828;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.53;ReadPosRankSum=-0.291;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,23:24:36:521,36,0
CP000253.1 1296815 . A G 737.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:54:766,54,0
CP000253.1 1296872 . A T 1267.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1296,90,0
CP000253.1 1296968 . G A 2241.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8876;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2270,160,0
CP000253.1 1297166 . A G 2084.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2113,147,0
CP000253.1 1297842 . C T 2337.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2366,163,0
CP000253.1 1298018 . C T 738.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:54:767,54,0
CP000253.1 1298024 . A G 747.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:54:776,54,0
CP000253.1 1298407 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1298510 . G T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1298546 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1298553 . C T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1298572 . A G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1303427 . T C 5423.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2369;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5452,379,0
CP000253.1 1303451 . G A 5464.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,231:232:99:5493,382,0
CP000253.1 1303496 . A G 5466.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0884;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=1.005;SOR=0.230 GT:AD:DP:GQ:PL 1/1:1,230:234:99:5495,388,0
CP000253.1 1303553 . T G 5262.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.468;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.71;ReadPosRankSum=1.985;SOR=0.787 GT:AD:DP:GQ:PL 1/1:2,220:223:99:5291,373,0
CP000253.1 1303557 . G C 5346.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2301;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,223:227:99:5375,382,0
CP000253.1 1303631 . T C 4570.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=1.307 GT:AD:DP:GQ:PL 1/1:0,175:177:99:4599,328,0
CP000253.1 1303721 . T A 3347.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,128:130:99:3376,241,0
CP000253.1 1303722 . C T 3294.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3323,235,0
CP000253.1 1303733 . T C 2839.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,116:117:99:2868,202,0
CP000253.1 1304046 . T A 755.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:54:784,54,0
CP000253.1 1304152 . A T 1569.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3049;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.54;SOR=1.238 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1598,114,0
CP000253.1 1304182 . T C 1833.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.973;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8906;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.09;ReadPosRankSum=2.320;SOR=0.339 GT:AD:DP:GQ:PL 1/1:3,80:83:99:1862,132,0
CP000253.1 1304383 . A T 3338.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3367,232,0
CP000253.1 1305196 . G A 1216.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1245,87,0
CP000253.1 1305394 . T A 1546.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1147;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.67;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,58:59:99:1575,114,0
CP000253.1 1305421 . A G 1651.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9587;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.08;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,61:62:99:1680,120,0
CP000253.1 1305691 . T C 2205.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=1.153 GT:AD:DP:GQ:PL 1/1:0,87:89:99:2234,157,0
CP000253.1 1306236 . A G 214.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:243,18,0
CP000253.1 1306370 . C T 1462.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1491,102,0
CP000253.1 1307266 . C T 439.31 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.475;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2489;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.97;ReadPosRankSum=1.088;SOR=0.892 GT:AD:DP:GQ:PL 0/1:2,20:22:1:465,0,1
CP000253.1 1307395 . T C 1702.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.55;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1731,117,0
CP000253.1 1307485 . C T 1514.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1543,105,0
CP000253.1 1307488 . C T 1519.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.35;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1548,105,0
CP000253.1 1307539 . T G 811.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.94;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:57:840,57,0
CP000253.1 1307718 . G A 450.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:479,33,0
CP000253.1 1307807 . G T 1177.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1206,84,0
CP000253.1 1307850 . G A 2528.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2557,181,0
CP000253.1 1308309 . G A 3483.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3512,244,0
CP000253.1 1308430 . C G 1922.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1951,138,0
CP000253.1 1308643 . A G 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 1308726 . C T 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 1310028 . C T 530.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:559,39,0
CP000253.1 1310348 . C T 227.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:256,18,0
CP000253.1 1310616 . T C 629.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:658,45,0
CP000253.1 1310642 . C T 892.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:63:921,63,0
CP000253.1 1310724 . A G 1656.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1685,114,0
CP000253.1 1310942 . T A 1166.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7791;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.61;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:55:81:1195,81,0
CP000253.1 1311027 . C T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1311385 . A G 1433.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1462,105,0
CP000253.1 1311514 . G A 1403.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1432,102,0
CP000253.1 1311543 . G A 1414.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1443,102,0
CP000253.1 1311645 . G A 2443.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.945;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.27;ReadPosRankSum=1.651;SOR=0.346 GT:AD:DP:GQ:PL 1/1:1,104:105:99:2472,172,0
CP000253.1 1311702 . A T 2893.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:127:99:2922,202,0
CP000253.1 1311837 . C G 3364.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3318;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3393,235,0
CP000253.1 1311926 . C T 3449.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,150:151:99:3478,238,0
CP000253.1 1312061 . T C 2910.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,127:128:99:2939,202,0
CP000253.1 1312062 . T C 2967.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,128:128:99:2996,208,0
CP000253.1 1312067 . G T 2884.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0937;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,120:121:99:2913,202,0
CP000253.1 1312088 . C T 2868.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6499;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,123:123:99:2897,202,0
CP000253.1 1312130 . C A 2809.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3050;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2838,196,0
CP000253.1 1312275 . A G 954.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,36:36:69:983,69,0
CP000253.1 1312295 . C T 895.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=1.418 GT:AD:DP:GQ:PL 1/1:0,34:34:66:924,66,0
CP000253.1 1312319 . T C 860.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=1.308 GT:AD:DP:GQ:PL 1/1:0,35:35:63:889,63,0
CP000253.1 1312525 . A G 565.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:42:594,42,0
CP000253.1 1313381 . G A 2398.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.95;SOR=1.141 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2427,172,0
CP000253.1 1313424 . T G 1097.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.44;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:81:1126,81,0
CP000253.1 1313642 . C A 2696.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2725,187,0
CP000253.1 1313643 . C A 2639.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.563;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.16;ReadPosRankSum=0.400;SOR=0.729 GT:AD:DP:GQ:PL 1/1:2,112:115:99:2668,186,0
CP000253.1 1313645 . A G 2647.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.519;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.02;ReadPosRankSum=-0.696;SOR=0.711 GT:AD:DP:GQ:PL 1/1:2,113:115:99:2676,185,0
CP000253.1 1313648 . T C 2693.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2722,187,0
CP000253.1 1313723 . G A 3018.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5569;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3047,208,0
CP000253.1 1313837 . T G 1547.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1576,108,0
CP000253.1 1313895 . G A 1193.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1222,87,0
CP000253.1 1313987 . T C 954.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:40:72:983,72,0
CP000253.1 1314030 . A C 561.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.41;ReadPosRankSum=1.742;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,23:24:42:590,42,0
CP000253.1 1314032 . A C 603.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:45:632,45,0
CP000253.1 1314039 . T C 1133.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,42:42:84:1162,84,0
CP000253.1 1315322 . T A 2738.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.95;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,98:100:99:2767,199,0
CP000253.1 1315427 . G A 3536.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2128;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3565,253,0
CP000253.1 1315460 . G C 3557.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4961;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3586,253,0
CP000253.1 1315622 . T G 3294.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3377;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3323,235,0
CP000253.1 1315708 . A G 2954.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8549;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,118:119:99:2983,211,0
CP000253.1 1315766 . A G 3407.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,145:146:99:3436,241,0
CP000253.1 1315769 . A T 3441.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1641;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3470,241,0
CP000253.1 1315817 . T A 3508.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.907;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.08;ReadPosRankSum=-0.764;SOR=0.372 GT:AD:DP:GQ:PL 1/1:1,151:153:99:3537,244,0
CP000253.1 1316008 . T C 2200.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2229,160,0
CP000253.1 1316124 . A T 1218.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:51:87:1247,87,0
CP000253.1 1316472 . C T 1923.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.767;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.38;ReadPosRankSum=-1.618;SOR=0.232 GT:AD:DP:GQ:PL 1/1:1,89:90:99:1952,135,0
CP000253.1 1316520 . G A 2286.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4341;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.20;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2315,160,0
CP000253.1 1316658 . T C 1555.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1584,111,0
CP000253.1 1316717 . A G 1257.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:49:90:1286,90,0
CP000253.1 1316828 . C G 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 1316831 . T A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 1316833 . T G 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 1316834 . C A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 1316835 . A T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 1316837 . A C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 1316891 . T G 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 1317309 . T C 942.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:69:971,69,0
CP000253.1 1317659 . T A 682.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:51:711,51,0
CP000253.1 1317678 . A G 599.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:26:45:628,45,0
CP000253.1 1317915 . T C 1981.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2010,138,0
CP000253.1 1317951 . A T 2200.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2229,157,0
CP000253.1 1318038 . T C 2956.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7698;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,129:129:99:2985,208,0
CP000253.1 1318093 . G T 2678.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2707,187,0
CP000253.1 1318750 . C T 1351.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6557;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1380,96,0
CP000253.1 1319013 . A G 664.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.895;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=30.22;ReadPosRankSum=0.789;SOR=0.352 GT:AD:DP:GQ:PL 1/1:1,21:22:51:693,51,0
CP000253.1 1319184 . G A 2728.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2372;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2757,190,0
CP000253.1 1320194 . T A 88.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:116,9,0
CP000253.1 1320203 . A G 142.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:170,12,0
CP000253.1 1320544 . T A 1506.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1535,105,0
CP000253.1 1320556 . T C 920.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.92;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:43:66:949,66,0
CP000253.1 1320565 . C A 647.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.13;ReadPosRankSum=1.487;SOR=0.568 GT:AD:DP:GQ:PL 1/1:1,27:28:48:676,48,0
CP000253.1 1320709 . G A 512.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:39:541,39,0
CP000253.1 1320721 . T C 472.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:36:501,36,0
CP000253.1 1320773 . G A 365.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:394,27,0
CP000253.1 1320850 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1320926 . G T 365.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:394,27,0
CP000253.1 1321028 . G A 537.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:566,39,0
CP000253.1 1321069 . A G 638.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:667,45,0
CP000253.1 1321409 . A T 1886.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.20;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,85:86:99:1915,132,0
CP000253.1 1321635 . A C 298.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:24:327,24,0
CP000253.1 1321654 . A T 257.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:21:286,21,0
CP000253.1 1321665 . T C 239.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:21:268,21,0
CP000253.1 1321710 . A G 304.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:333,24,0
CP000253.1 1321725 . C T 390.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:30:419,30,0
CP000253.1 1322125 . A G 1795.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1824,129,0
CP000253.1 1322211 . G T 2398.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2427,166,0
CP000253.1 1322224 . G A 2519.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2548,175,0
CP000253.1 1322239 . C T 2206.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.542;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.85;ReadPosRankSum=1.086;SOR=0.754 GT:AD:DP:GQ:PL 1/1:2,99:101:99:2235,115,0
CP000253.1 1322720 . T A 792.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:57:821,57,0
CP000253.1 1322807 . A G 508.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:537,36,0
CP000253.1 1322812 . C T 504.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:533,36,0
CP000253.1 1322816 . G T 504.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:533,36,0
CP000253.1 1322839 . C T 549.18 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.660;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8089;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.34;ReadPosRankSum=1.480;SOR=0.287 GT:AD:DP:GQ:PL 1/1:1,26:27:10:577,10,0
CP000253.1 1322927 . G A 566.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:595,42,0
CP000253.1 1322965 . C T 815.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:60:844,60,0
CP000253.1 1322972 . C T 858.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:63:887,63,0
CP000253.1 1323032 . A G 987.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1016,72,0
CP000253.1 1323053 . T C 844.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:873,60,0
CP000253.1 1323126 . G T 634.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:663,45,0
CP000253.1 1323136 . T A 577.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:606,42,0
CP000253.1 1323189 . C T 723.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:51:752,51,0
CP000253.1 1323198 . C T 719.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:51:748,51,0
CP000253.1 1323216 . T C 763.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.82;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:54:792,54,0
CP000253.1 1323222 . A T 749.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:778,54,0
CP000253.1 1323389 . G A 594.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.786;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=-1.389;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,24:25:45:623,45,0
CP000253.1 1323477 . T A 437.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:19:33:466,33,0
CP000253.1 1323575 . A C 1317.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1346,93,0
CP000253.1 1323600 . T C 1665.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6783;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1694,117,0
CP000253.1 1323618 . A G 1685.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4715;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1714,120,0
CP000253.1 1323708 . G A 2242.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2271,157,0
CP000253.1 1324037 . A T 1559.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1588,111,0
CP000253.1 1325060 . T C 171.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:200,15,0
CP000253.1 1325727 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1327732 . A G 347.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:376,27,0
CP000253.1 1328123 . G T 839.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:868,60,0
CP000253.1 1328372 . T C 1076.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:75:1105,75,0
CP000253.1 1328405 . T C 1114.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:78:1143,78,0
CP000253.1 1329471 . A T 1544.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5349;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1573,111,0
CP000253.1 1329660 . G A 3002.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3031,211,0
CP000253.1 1329663 . G A 3064.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,131:133:99:3093,217,0
CP000253.1 1329801 . T C 2625.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1383;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2654,190,0
CP000253.1 1329822 . A G 2955.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2984,211,0
CP000253.1 1330122 . T G 3982.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.50;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4011,277,0
CP000253.1 1330713 . G A 3514.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8839;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.68;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,127:128:99:3543,259,0
CP000253.1 1331116 . T C 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 1331129 . T A 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1331822 . A G 451.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:480,33,0
CP000253.1 1332014 . G A 712.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:741,51,0
CP000253.1 1332457 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1332559 . A T 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 1332689 . T G 1259.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.1010;MLEAC=2;MLEAF=1.00;MQ=41.87;MQ0=0;QD=17.50;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,72:72:90:1288,90,0
CP000253.1 1332743 . G T 665.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.032;DP=72;Dels=0.00;ExcessHet=3.0103;FS=1.221;HaplotypeScore=2.4167;MLEAC=1;MLEAF=0.500;MQ=41.47;MQ0=2;MQRankSum=4.989;QD=9.25;ReadPosRankSum=-4.112;SOR=0.763 GT:AD:DP:GQ:PL 0/1:37,35:72:99:694,0,363
CP000253.1 1332995 . C T 785.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.08;MQ0=2;QD=21.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,36:36:57:814,57,0
CP000253.1 1333135 . G A 97.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.83;MQ0=0;QD=19.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:125,9,0
CP000253.1 1333268 . T C 178.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.88;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:207,15,0
CP000253.1 1333282 . A T 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 1333333 . C A 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 1333362 . C T 316.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:345,24,0
CP000253.1 1333696 . A G 5520.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.3677;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,234:236:99:5549,388,0
CP000253.1 1333759 . G A 5837.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3420;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,226:229:99:5866,412,0
CP000253.1 1333857 . A G 3737.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,152:153:99:3766,268,0
CP000253.1 1333930 . T A 3417.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4248;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=1.001 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3446,244,0
CP000253.1 1333981 . G A 2897.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,122:123:99:2926,208,0
CP000253.1 1334158 . A G 2309.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2338,163,0
CP000253.1 1334549 . G T 1662.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1691,117,0
CP000253.1 1335176 . T A 4730.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.77;ReadPosRankSum=1.480;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,198:199:99:4759,328,0
CP000253.1 1335233 . C T 5004.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,210:211:99:5033,349,0
CP000253.1 1335296 . A G 4728.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3826;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.00;ReadPosRankSum=1.302;SOR=0.288 GT:AD:DP:GQ:PL 1/1:1,196:198:99:4757,331,0
CP000253.1 1335305 . C T 4584.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.139;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.47;ReadPosRankSum=1.463;SOR=0.266 GT:AD:DP:GQ:PL 1/1:1,179:180:99:4613,322,0
CP000253.1 1335308 . A G 4602.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4631,325,0
CP000253.1 1335311 . C T 4563.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9927;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4592,322,0
CP000253.1 1335317 . T C 4581.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5843;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4610,322,0
CP000253.1 1335324 . C T 4669.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6369;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4698,331,0
CP000253.1 1335341 . A T 4338.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4367,307,0
CP000253.1 1335350 . G A 4362.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5959;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4391,310,0
CP000253.1 1335359 . T C 4217.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.799;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.26;ReadPosRankSum=0.363;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,166:167:99:4246,304,0
CP000253.1 1335378 . A G 4286.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.997;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.46;ReadPosRankSum=0.000;SOR=0.282 GT:AD:DP:GQ:PL 1/1:1,161:162:99:4315,304,0
CP000253.1 1335380 . T A 4131.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.866;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.99;ReadPosRankSum=0.251;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,158:159:99:4160,295,0
CP000253.1 1335410 . A G 4270.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4299,304,0
CP000253.1 1335422 . G A 4500.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5791;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4529,322,0
CP000253.1 1335437 . G A 4447.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4476,313,0
CP000253.1 1335443 . C A 4525.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6754;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4554,319,0
CP000253.1 1335449 . G A 4618.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7168;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4647,325,0
CP000253.1 1335464 . C T 4424.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6035;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4453,316,0
CP000253.1 1335467 . T C 4411.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,175:176:99:4440,313,0
CP000253.1 1335493 . A T 4805.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=1.167;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,192:193:99:4834,340,0
CP000253.1 1335506 . A T 5175.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5204,364,0
CP000253.1 1335509 . A T 5150.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5179,361,0
CP000253.1 1335512 . G A 5231.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,208:208:99:5260,367,0
CP000253.1 1335545 . A G 6006.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.917;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=1.684;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,247:249:99:6035,421,0
CP000253.1 1335557 . C T 6082.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1360;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,247:248:99:6111,424,0
CP000253.1 1335560 . T A 6147.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6176,430,0
CP000253.1 1335569 . C T 5980.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5669;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6009,424,0
CP000253.1 1335572 . T C 5807.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1432;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,239:241:99:5836,409,0
CP000253.1 1335575 . A T 5978.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,242:242:99:6007,418,0
CP000253.1 1335593 . C T 6147.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0858;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6176,430,0
CP000253.1 1335596 . A T 5762.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6621;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.62;ReadPosRankSum=-0.107;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,243:244:99:5791,409,0
CP000253.1 1335599 . A T 6102.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,246:248:99:6131,427,0
CP000253.1 1335608 . G A 6025.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1884;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6054,421,0
CP000253.1 1335614 . T A 6071.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6100,424,0
CP000253.1 1335629 . C T 6061.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,247:249:99:6090,427,0
CP000253.1 1335632 . C T 6056.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6085,427,0
CP000253.1 1335641 . C T 6068.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4696;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,247:250:99:6097,430,0
CP000253.1 1335648 . C T 6050.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.809;DP=249;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5826;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.60;ReadPosRankSum=-1.564;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,245:247:99:6079,427,0
CP000253.1 1335659 . A T 5965.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1267;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,247:247:99:5994,424,0
CP000253.1 1335686 . A G 5932.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1439;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,243:244:99:5961,418,0
CP000253.1 1335743 . A G 5167.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1587;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,215:216:99:5196,364,0
CP000253.1 1335746 . C T 5266.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5295,370,0
CP000253.1 1335749 . T A 5404.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2668;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,224:224:99:5433,376,0
CP000253.1 1335761 . T C 5301.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.940;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2388;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.99;ReadPosRankSum=-0.713;SOR=0.311 GT:AD:DP:GQ:PL 1/1:1,220:222:99:5330,370,0
CP000253.1 1335767 . A T 5405.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.747;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0615;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.03;ReadPosRankSum=-1.752;SOR=0.186 GT:AD:DP:GQ:PL 1/1:2,223:226:99:5434,376,0
CP000253.1 1335770 . A T 5325.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6722;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,225:225:99:5354,370,0
CP000253.1 1335803 . T C 4197.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.874;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.55;ReadPosRankSum=1.733;SOR=0.375 GT:AD:DP:GQ:PL 1/1:1,170:171:99:4226,295,0
CP000253.1 1335812 . A T 4191.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4220,298,0
CP000253.1 1335824 . C T 3829.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,147:148:99:3858,271,0
CP000253.1 1335836 . T C 3490.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3519,250,0
CP000253.1 1335848 . A T 3441.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7848;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3470,244,0
CP000253.1 1335857 . T C 3135.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4397;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3164,223,0
CP000253.1 1335869 . T C 3185.74 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.33;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,121:122:99:3214,226,0
CP000253.1 1335872 . A G 3200.06 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9926;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3229,229,0
CP000253.1 1335875 . C T 3242.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,123:124:99:3271,232,0
CP000253.1 1335908 . T C 2656.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,108:110:99:2685,190,0
CP000253.1 1335941 . T C 2446.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2475,172,0
CP000253.1 1335944 . A G 2288.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2317,160,0
CP000253.1 1336203 . C T 1444.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:61:99:1473,102,0
CP000253.1 1336222 . T C 1058.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1087,75,0
CP000253.1 1336313 . A G 218.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:247,18,0
CP000253.1 1336324 . T C 191.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:220,15,0
CP000253.1 1336364 . A C 307.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:336,24,0
CP000253.1 1336403 . T G 312.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.85;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:341,24,0
CP000253.1 1336630 . A G 998.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.034;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.23;ReadPosRankSum=0.888;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,42:43:72:1027,72,0
CP000253.1 1336657 . A G 1128.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1157,81,0
CP000253.1 1336995 . A G 4388.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6153;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4417,313,0
CP000253.1 1337098 . A G 3432.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3461,247,0
CP000253.1 1337283 . T C 2361.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2390,172,0
CP000253.1 1338138 . T C 922.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2691;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:37:69:951,69,0
CP000253.1 1338239 . G A 1253.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2293;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:52:90:1282,90,0
CP000253.1 1338255 . T A 1651.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5244;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1680,120,0
CP000253.1 1338279 . A T 1855.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1884,132,0
CP000253.1 1338345 . T C 3158.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.716;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5844;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.57;ReadPosRankSum=1.337;SOR=0.699 GT:AD:DP:GQ:PL 1/1:1,133:135:99:3187,226,0
CP000253.1 1338495 . A G 5049.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,205:207:99:5078,358,0
CP000253.1 1338498 . T A 4958.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9803;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,205:205:99:4987,349,0
CP000253.1 1338499 . C T 4955.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8744;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,203:205:99:4984,352,0
CP000253.1 1338831 . A G 5956.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,239:239:99:5985,421,0
CP000253.1 1338927 . T C 5400.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,219:220:99:5429,388,0
CP000253.1 1339154 . A C 4734.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4101;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4763,337,0
CP000253.1 1339169 . A G 4447.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.905;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.17;ReadPosRankSum=1.733;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,183:186:99:4476,319,0
CP000253.1 1339318 . A T 4873.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3912;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,192:192:99:4902,349,0
CP000253.1 1339327 . C A 4892.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0265;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4921,349,0
CP000253.1 1339361 . A T 4628.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.729;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.15;ReadPosRankSum=1.429;SOR=0.358 GT:AD:DP:GQ:PL 1/1:1,176:177:99:4657,331,0
CP000253.1 1339460 . G A 4277.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.743;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.87;ReadPosRankSum=-2.000;SOR=0.843 GT:AD:DP:GQ:PL 1/1:2,170:172:99:4306,262,0
CP000253.1 1339621 . C A 3057.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.136;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=0.452;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,122:124:99:3086,217,0
CP000253.1 1339816 . T C 2591.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.979 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2620,187,0
CP000253.1 1339817 . T C 2657.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2686,190,0
CP000253.1 1339853 . C T 2830.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2859,202,0
CP000253.1 1339869 . G A 2688.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7396;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2717,193,0
CP000253.1 1339879 . T C 2767.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1370;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2796,199,0
CP000253.1 1339892 . C T 2918.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8911;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2947,211,0
CP000253.1 1339940 . A G 4252.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=1.077 GT:AD:DP:GQ:PL 1/1:0,163:164:99:4281,304,0
CP000253.1 1339998 . C T 4330.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.753;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0857;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.78;ReadPosRankSum=-0.464;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,167:170:99:4359,313,0
CP000253.1 1340123 . G A 4820.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4849,349,0
CP000253.1 1340154 . A G 4670.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9089;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4699,331,0
CP000253.1 1340160 . G A 4222.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2989;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4251,304,0
CP000253.1 1340161 . C T 4174.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2715;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,161:162:99:4203,298,0
CP000253.1 1340163 . T A 4295.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4324,310,0
CP000253.1 1340169 . T A 4920.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.909;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7242;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=1.716;SOR=0.357 GT:AD:DP:GQ:PL 1/1:1,192:195:99:4949,349,0
CP000253.1 1340184 . T G 4889.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.602;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7250;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=-0.050;QD=23.97;ReadPosRankSum=1.042;SOR=0.105 GT:AD:DP:GQ:PL 1/1:2,202:205:99:4918,352,0
CP000253.1 1340271 . G A 4895.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3058;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4924,349,0
CP000253.1 1340308 . T C 4998.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.879;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2034;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=-1.246;SOR=0.544 GT:AD:DP:GQ:PL 1/1:1,195:196:99:5027,355,0
CP000253.1 1340592 . G A 3341.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3370,235,0
CP000253.1 1340631 . A T 2827.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1446;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2856,199,0
CP000253.1 1340828 . T C 1500.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7654;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,61:62:99:1529,108,0
CP000253.1 1340966 . T C 2854.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6072;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,125:125:99:2883,199,0
CP000253.1 1341002 . A T 3284.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,141:142:99:3313,229,0
CP000253.1 1341017 . G A 3275.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0729;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.57;ReadPosRankSum=-0.087;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,138:139:99:3304,229,0
CP000253.1 1341185 . A G 2376.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0883;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2405,169,0
CP000253.1 1341212 . T A 2677.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2706,190,0
CP000253.1 1341218 . G A 2572.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2601,181,0
CP000253.1 1341502 . G T 964.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:72:993,72,0
CP000253.1 1341921 . T C 3279.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0536;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3308,235,0
CP000253.1 1342172 . G C 3233.06 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.50;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3260,235,0
CP000253.1 1342317 . C T 3272.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3301,235,0
CP000253.1 1342332 . T A 3261.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3290,229,0
CP000253.1 1342422 . T A 4167.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,180:182:99:4196,289,0
CP000253.1 1342676 . T C 1298.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1327,93,0
CP000253.1 1343062 . T A 1282.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:93:1311,93,0
CP000253.1 1343221 . C A 2816.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2845,199,0
CP000253.1 1343450 . T G 5034.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.797;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9019;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.31;ReadPosRankSum=-0.096;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,215:216:99:5063,349,0
CP000253.1 1343674 . C T 3047.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=1.034 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3076,217,0
CP000253.1 1345767 . T A 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 1345819 . T C 448.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8304;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:477,33,0
CP000253.1 1346438 . G A 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1350818 . C T 313.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:24:342,24,0
CP000253.1 1350924 . A G 309.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:338,24,0
CP000253.1 1350946 . T G 23.79 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.012;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.88;MQ0=0;MQRankSum=-3.735;QD=1.49;ReadPosRankSum=-1.202;SOR=0.693 GT:AD:DP:GQ:PL 0/1:14,2:16:52:52,0,277
CP000253.1 1351334 . T C 131.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:159,12,0
CP000253.1 1351357 . C T 120.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:148,12,0
CP000253.1 1351419 . T C 39.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:67,6,0
CP000253.1 1351856 . C A 976.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1005,72,0
CP000253.1 1352006 . T C 709.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:738,51,0
CP000253.1 1352807 . G A 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 1352899 . T C 346.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.90;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:27:375,27,0
CP000253.1 1352900 . A C 347.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:27:376,27,0
CP000253.1 1353284 . A G 2979.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3008,208,0
CP000253.1 1353516 . A G 1027.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:40:75:1056,75,0
CP000253.1 1353597 . A G 1527.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6232;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.14;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1556,108,0
CP000253.1 1353762 . G T 1326.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1355,93,0
CP000253.1 1353765 . C A 1110.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:78:1139,78,0
CP000253.1 1354170 . C T 178.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:207,15,0
CP000253.1 1354214 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:6:90,6,0
CP000253.1 1354513 . G A 295.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.13;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:24:324,24,0
CP000253.1 1354723 . G T 1881.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1910,132,0
CP000253.1 1355512 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1355525 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1355558 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1355564 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1355569 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1355581 . T C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1355589 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1355599 . C T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1355611 . A T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1355658 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1355668 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1355687 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1355688 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1355712 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1355717 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1355750 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1355771 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1355785 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1355802 . T G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1355827 . T A 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=2.78;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:39:39,0,39
CP000253.1 1355844 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1355876 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1355879 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1355880 . C A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1355883 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1356367 . G A 3416.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7420;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3445,241,0
CP000253.1 1356592 . A G 1597.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1626,114,0
CP000253.1 1356660 . A G 1684.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1713,120,0
CP000253.1 1356841 . T G 1480.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.607;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5877;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.44;ReadPosRankSum=-1.517;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,55:56:99:1509,111,0
CP000253.1 1357481 . T C 5178.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.671;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9849;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.54;ReadPosRankSum=0.500;SOR=0.654 GT:AD:DP:GQ:PL 1/1:3,208:212:99:5207,294,0
CP000253.1 1357484 . T G 5214.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.705;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.60;ReadPosRankSum=0.588;SOR=0.939 GT:AD:DP:GQ:PL 1/1:3,209:212:99:5243,339,0
CP000253.1 1357544 . C T 5834.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,233:233:99:5863,409,0
CP000253.1 1357616 . T C 5905.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.607;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.0563;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.01;ReadPosRankSum=1.622;SOR=0.743 GT:AD:DP:GQ:PL 1/1:2,244:247:99:5934,421,0
CP000253.1 1357631 . T G 5762.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.594;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5244;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.11;ReadPosRankSum=1.860;SOR=0.347 GT:AD:DP:GQ:PL 1/1:4,235:239:99:5791,415,0
CP000253.1 1357651 . G A 5631.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,217:217:99:5660,403,0
CP000253.1 1357709 . C T 5124.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.752;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5166;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.97;ReadPosRankSum=1.505;SOR=0.340 GT:AD:DP:GQ:PL 1/1:1,189:190:99:5153,333,0
CP000253.1 1357826 . C T 4805.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.7584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,186:187:99:4834,346,0
CP000253.1 1357952 . T C 5965.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6402;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,245:245:99:5994,421,0
CP000253.1 1358237 . A G 3562.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3591,259,0
CP000253.1 1358348 . G A 3858.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0991;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3887,274,0
CP000253.1 1358357 . A C 3923.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.961;DP=162;Dels=0.00;ExcessHet=3.0103;FS=3.097;HaplotypeScore=17.1233;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.37;ReadPosRankSum=2.526;SOR=0.202 GT:AD:DP:GQ:PL 1/1:3,158:162:99:3952,253,0
CP000253.1 1358396 . A T 3613.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.836;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.92;ReadPosRankSum=0.036;SOR=0.448 GT:AD:DP:GQ:PL 1/1:1,144:146:99:3642,259,0
CP000253.1 1358405 . C T 3663.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.623;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5351;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.44;ReadPosRankSum=0.768;SOR=0.463 GT:AD:DP:GQ:PL 1/1:2,142:145:99:3692,262,0
CP000253.1 1358732 . T A 4245.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4274,295,0
CP000253.1 1359775 . A G 5336.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,235:237:99:5365,376,0
CP000253.1 1360275 . T A 256.85 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.35;ReadPosRankSum=-1.246;SOR=0.283 GT:AD:DP:GQ:PL 0/1:1,13:14:17:285,0,17
CP000253.1 1360311 . G A 256.85 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.696;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.35;ReadPosRankSum=-1.372;SOR=0.283 GT:AD:DP:GQ:PL 0/1:1,13:14:17:285,0,17
CP000253.1 1360722 . T C 707.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:736,51,0
CP000253.1 1362698 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1362729 . G T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1362742 . C A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1363132 . A C 295.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:324,24,0
CP000253.1 1363133 . T G 313.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:342,24,0
CP000253.1 1363417 . A G 2387.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4462;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2416,169,0
CP000253.1 1363576 . C T 1061.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1090,78,0
CP000253.1 1363580 . C T 1107.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:84:1136,84,0
CP000253.1 1363610 . A T 1390.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1419,102,0
CP000253.1 1363654 . T C 1327.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:96:1356,96,0
CP000253.1 1363868 . C T 1267.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,51:51:90:1296,90,0
CP000253.1 1363878 . T A 1264.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1293,90,0
CP000253.1 1364208 . G A 264.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:293,21,0
CP000253.1 1364891 . G C 898.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7803;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:63:927,63,0
CP000253.1 1365321 . A G 1070.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,40:40:78:1099,78,0
CP000253.1 1365508 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1365510 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1365519 . C G 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1365532 . T A 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1365594 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:6:90,6,0
CP000253.1 1365653 . G A 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 1365815 . A G 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 1365862 . T G 231.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:11:18:260,18,0
CP000253.1 1366031 . T C 1314.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1343,93,0
CP000253.1 1366175 . T C 1969.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:89:99:1998,138,0
CP000253.1 1366205 . G A 1857.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,84:84:99:1886,129,0
CP000253.1 1366264 . C A 1538.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:69:99:1567,108,0
CP000253.1 1366265 . A G 1554.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1583,108,0
CP000253.1 1366379 . T A 783.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,30:30:57:812,57,0
CP000253.1 1366433 . T A 572.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:601,42,0
CP000253.1 1366499 . T C 623.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:652,45,0
CP000253.1 1366574 . A G 1134.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:49:81:1163,81,0
CP000253.1 1366595 . G T 1225.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1254,87,0
CP000253.1 1366622 . A G 1335.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1364,93,0
CP000253.1 1366637 . A G 1487.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1516,105,0
CP000253.1 1366649 . A T 1522.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1551,105,0
CP000253.1 1366697 . A G 1690.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1719,117,0
CP000253.1 1366721 . T A 1735.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1764,120,0
CP000253.1 1366733 . A G 1731.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1760,120,0
CP000253.1 1366874 . G A 1068.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1097,75,0
CP000253.1 1367052 . A G 572.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:601,42,0
CP000253.1 1367057 . A G 545.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:574,39,0
CP000253.1 1367370 . A T 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 1367715 . T A 717.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=23.15;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:746,51,0
CP000253.1 1367740 . T A 790.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=24.71;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:57:819,57,0
CP000253.1 1368028 . A T 1738.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1767,123,0
CP000253.1 1368164 . C T 1480.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1509,105,0
CP000253.1 1368248 . A G 2367.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.885;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.44;ReadPosRankSum=0.652;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2396,172,0
CP000253.1 1368281 . C G 2535.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2564,181,0
CP000253.1 1368293 . C T 2540.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3434;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2569,178,0
CP000253.1 1368295 . A C 2529.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.921;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3434;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.09;ReadPosRankSum=-1.568;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,104:105:99:2558,178,0
CP000253.1 1368350 . G A 2305.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=22.61;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2334,160,0
CP000253.1 1368419 . T C 1843.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1872,129,0
CP000253.1 1368434 . T C 1578.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1607,111,0
CP000253.1 1368485 . G A 1362.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:55:99:1391,99,0
CP000253.1 1368512 . A G 1255.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:53:90:1284,90,0
CP000253.1 1368627 . G A 852.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:39:60:881,60,0
CP000253.1 1368759 . T C 1263.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8302;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:56:90:1292,90,0
CP000253.1 1368923 . G T 1492.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2803;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:63:99:1521,105,0
CP000253.1 1368948 . T A 1355.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:57:96:1384,96,0
CP000253.1 1368954 . G A 1358.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1387,99,0
CP000253.1 1369258 . A G 1176.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1205,84,0
CP000253.1 1369426 . T A 1339.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:96:1368,96,0
CP000253.1 1370400 . C T 2611.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.577;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1590;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.32;ReadPosRankSum=2.242;SOR=0.806 GT:AD:DP:GQ:PL 1/1:2,110:112:99:2640,184,0
CP000253.1 1370890 . A T 3818.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,157:158:99:3847,271,0
CP000253.1 1370893 . C T 3850.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3879,271,0
CP000253.1 1371103 . C T 3761.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2901;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=23.08;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,163:163:99:3790,265,0
CP000253.1 1371217 . C A 3681.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.955;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=1.709;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,143:146:99:3710,262,0
CP000253.1 1371235 . T A 3622.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.882;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=1.470;SOR=0.735 GT:AD:DP:GQ:PL 1/1:1,144:145:99:3651,259,0
CP000253.1 1371346 . T G 1523.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.915;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=1.109;SOR=0.314 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1552,111,0
CP000253.1 1371364 . G T 985.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.812;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.64;ReadPosRankSum=-0.087;SOR=0.633 GT:AD:DP:GQ:PL 1/1:1,39:40:72:1014,72,0
CP000253.1 1371394 . T A 642.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:27:48:671,48,0
CP000253.1 1371601 . T C 1337.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1366,93,0
CP000253.1 1371706 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1371803 . C A 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 1372567 . T C 2885.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,126:126:99:2914,205,0
CP000253.1 1372930 . C T 3779.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=1.032 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3808,268,0
CP000253.1 1373151 . G C 5192.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3725;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,222:224:99:5221,361,0
CP000253.1 1373236 . G A 4940.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.846;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=1.698;SOR=0.335 GT:AD:DP:GQ:PL 1/1:1,197:199:99:4969,352,0
CP000253.1 1374253 . T C 136.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:164,12,0
CP000253.1 1374324 . T A 287.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:24:316,24,0
CP000253.1 1374433 . G A 1040.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1069,75,0
CP000253.1 1374601 . A T 1321.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.007;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.19;ReadPosRankSum=-1.431;SOR=0.450 GT:AD:DP:GQ:PL 1/1:1,56:57:93:1350,93,0
CP000253.1 1374607 . C T 1105.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.68;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:78:1134,78,0
CP000253.1 1374766 . C T 791.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4363;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:60:820,60,0
CP000253.1 1374784 . C T 548.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:42:577,42,0
CP000253.1 1374934 . A T 432.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.85;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:33:461,33,0
CP000253.1 1374985 . G T 473.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.87;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:36:502,36,0
CP000253.1 1375139 . A G 1283.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9469;MLEAC=2;MLEAF=1.00;MQ=52.76;MQ0=2;QD=22.52;SOR=1.262 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1312,96,0
CP000253.1 1375204 . C A 1059.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=49.61;MQ0=4;QD=21.63;SOR=1.154 GT:AD:DP:GQ:PL 1/1:2,47:49:81:1088,81,0
CP000253.1 1375224 . C T 1091.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=50.13;MQ0=2;QD=23.23;SOR=1.154 GT:AD:DP:GQ:PL 1/1:0,47:48:84:1120,84,0
CP000253.1 1375232 . A C 1119.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=49.73;MQ0=2;QD=22.85;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1148,84,0
CP000253.1 1375267 . T G 864.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.686;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3031;MLEAC=2;MLEAF=1.00;MQ=42.11;MQ0=3;MQRankSum=-1.127;QD=18.40;ReadPosRankSum=1.183;SOR=0.753 GT:AD:DP:GQ:PL 1/1:2,45:47:69:893,69,0
CP000253.1 1375281 . A G 828.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3196;MLEAC=2;MLEAF=1.00;MQ=40.25;MQ0=5;QD=17.63;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,47:47:66:857,66,0
CP000253.1 1375409 . A T 1156.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.798;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.71;MQ0=2;MQRankSum=1.891;QD=26.29;ReadPosRankSum=-1.173;SOR=0.951 GT:AD:DP:GQ:PL 1/1:1,43:44:87:1185,87,0
CP000253.1 1375709 . G A 1235.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1264,87,0
CP000253.1 1376111 . C A 298.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:327,24,0
CP000253.1 1376643 . A G 1371.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7577;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1400,102,0
CP000253.1 1376863 . G A 2569.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2598,178,0
CP000253.1 1377157 . C G 2614.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2643,187,0
CP000253.1 1377166 . T C 2695.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=1.043 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2724,190,0
CP000253.1 1377167 . C T 2679.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2708,190,0
CP000253.1 1377374 . G A 5790.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5819,415,0
CP000253.1 1377524 . T C 6274.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.908;DP=242;Dels=0.00;ExcessHet=3.0103;FS=3.269;HaplotypeScore=27.1092;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.93;ReadPosRankSum=0.843;SOR=0.316 GT:AD:DP:GQ:PL 1/1:2,240:242:99:6303,430,0
CP000253.1 1377699 . G A 6353.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.820;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.83;ReadPosRankSum=0.563;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,245:246:99:6382,423,0
CP000253.1 1377702 . G A 6371.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7452;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,244:244:99:6400,457,0
CP000253.1 1378107 . C T 5469.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7432;MLEAC=2;MLEAF=1.00;MQ=59.03;MQ0=0;QD=28.34;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,193:193:99:5498,397,0
CP000253.1 1378131 . T G 4085.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.255;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.6052;MLEAC=2;MLEAF=1.00;MQ=58.67;MQ0=0;MQRankSum=0.748;QD=26.19;ReadPosRankSum=0.073;SOR=0.046 GT:AD:DP:GQ:PL 1/1:4,152:158:99:4114,282,0
CP000253.1 1378134 . C T 4359.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=42.9272;MLEAC=2;MLEAF=1.00;MQ=58.67;MQ0=0;QD=28.13;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,155:157:99:4388,322,0
CP000253.1 1378137 . C T 4465.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.4081;MLEAC=2;MLEAF=1.00;MQ=58.67;MQ0=0;QD=28.44;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,157:158:99:4494,331,0
CP000253.1 1378157 . G T 3932.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.401;DP=149;Dels=0.00;ExcessHet=3.0103;FS=3.363;HaplotypeScore=17.8913;MLEAC=2;MLEAF=1.00;MQ=58.59;MQ0=0;MQRankSum=3.814;QD=26.39;ReadPosRankSum=-0.264;SOR=0.375 GT:AD:DP:GQ:PL 1/1:2,147:149:99:3961,295,0
CP000253.1 1378188 . A C 2494.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.938;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.9423;MLEAC=2;MLEAF=1.00;MQ=58.21;MQ0=0;MQRankSum=0.248;QD=24.70;ReadPosRankSum=-1.054;SOR=0.056 GT:AD:DP:GQ:PL 1/1:4,97:101:99:2523,167,0
CP000253.1 1378200 . A G 2198.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6640;MLEAC=2;MLEAF=1.00;MQ=58.01;MQ0=0;QD=25.57;SOR=0.947 GT:AD:DP:GQ:PL 1/1:0,86:87:99:2227,168,0
CP000253.1 1378215 . T C 1865.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.320;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5873;MLEAC=2;MLEAF=1.00;MQ=57.74;MQ0=0;MQRankSum=-1.059;QD=24.23;ReadPosRankSum=0.976;SOR=0.063 GT:AD:DP:GQ:PL 1/1:4,73:77:99:1894,147,0
CP000253.1 1378269 . A T 1313.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=56.51;MQ0=0;QD=29.86;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1342,102,0
CP000253.1 1378275 . T A 868.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8857;MLEAC=2;MLEAF=1.00;MQ=55.14;MQ0=0;QD=27.15;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:72:897,72,0
CP000253.1 1378278 . A T 895.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9916;MLEAC=2;MLEAF=1.00;MQ=55.14;MQ0=0;QD=27.99;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:72:924,72,0
CP000253.1 1378279 . C T 992.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.14;MQ0=0;QD=31.02;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:78:1021,78,0
CP000253.1 1378289 . T C 858.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=54.98;MQ0=0;QD=27.70;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:69:887,69,0
CP000253.1 1378293 . A T 738.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.000;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3224;MLEAC=2;MLEAF=1.00;MQ=54.89;MQ0=0;MQRankSum=1.803;QD=27.36;ReadPosRankSum=1.736;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,26:27:35:767,35,0
CP000253.1 1378295 . T G 678.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.554;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4256;MLEAC=2;MLEAF=1.00;MQ=54.89;MQ0=0;MQRankSum=1.659;QD=26.11;ReadPosRankSum=2.072;SOR=0.141 GT:AD:DP:GQ:PL 1/1:2,24:27:29:707,29,0
CP000253.1 1378304 . C T 633.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.831;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1110;MLEAC=1;MLEAF=0.500;MQ=53.00;MQ0=0;MQRankSum=2.660;QD=23.47;ReadPosRankSum=1.972;SOR=0.473 GT:AD:DP:GQ:PL 0/1:3,24:27:28:662,0,28
CP000253.1 1378329 . G A 133.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.825;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7212;MLEAC=1;MLEAF=0.500;MQ=43.83;MQ0=3;MQRankSum=2.371;QD=5.82;ReadPosRankSum=0.159;SOR=0.330 GT:AD:DP:GQ:PL 0/1:14,9:25:99:162,0,277
CP000253.1 1378332 . G T 93.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.267;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7212;MLEAC=1;MLEAF=0.500;MQ=43.03;MQ0=3;MQRankSum=1.627;QD=3.91;ReadPosRankSum=0.785;SOR=0.859 GT:AD:DP:GQ:PL 0/1:16,8:24:99:122,0,313
CP000253.1 1378337 . G T 99.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.478;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2762;MLEAC=1;MLEAF=0.500;MQ=43.03;MQ0=3;MQRankSum=1.627;QD=4.16;ReadPosRankSum=1.452;SOR=0.859 GT:AD:DP:GQ:PL 0/1:16,8:24:99:128,0,283
CP000253.1 1378338 . C T 489.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2762;MLEAC=2;MLEAF=1.00;MQ=43.03;MQ0=3;QD=20.41;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,24:24:42:518,42,0
CP000253.1 1378347 . C T 523.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.1445;MLEAC=2;MLEAF=1.00;MQ=43.03;MQ0=3;QD=21.82;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,24:24:45:552,45,0
CP000253.1 1378350 . T A 466.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.5784;MLEAC=2;MLEAF=1.00;MQ=43.03;MQ0=3;QD=20.29;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,23:24:42:495,42,0
CP000253.1 1378352 . A G 525.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.5784;MLEAC=2;MLEAF=1.00;MQ=43.03;MQ0=3;QD=21.91;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,24:24:45:554,45,0
CP000253.1 1378353 . A T 499.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.5784;MLEAC=2;MLEAF=1.00;MQ=43.03;MQ0=3;QD=20.82;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,24:24:42:528,42,0
CP000253.1 1378354 . C T 497.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.5784;MLEAC=2;MLEAF=1.00;MQ=43.03;MQ0=3;QD=21.64;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,23:24:42:526,42,0
CP000253.1 1378357 . T G 697.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.888;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.5784;MLEAC=2;MLEAF=1.00;MQ=46.92;MQ0=3;MQRankSum=-0.885;QD=23.26;ReadPosRankSum=-0.710;SOR=1.549 GT:AD:DP:GQ:PL 1/1:1,29:30:57:726,57,0
CP000253.1 1378362 . T G 632.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.777;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7451;MLEAC=2;MLEAF=1.00;MQ=47.84;MQ0=3;MQRankSum=-0.837;QD=19.77;ReadPosRankSum=1.620;SOR=1.447 GT:AD:DP:GQ:PL 1/1:1,31:32:54:661,54,0
CP000253.1 1378375 . G T 2410.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.835;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9608;MLEAC=2;MLEAF=1.00;MQ=55.13;MQ0=3;MQRankSum=-0.462;QD=25.38;ReadPosRankSum=-0.659;SOR=0.545 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2439,187,0
CP000253.1 1378383 . T A 2817.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.899;DP=118;Dels=0.00;ExcessHet=3.0103;FS=3.372;HaplotypeScore=19.2031;MLEAC=2;MLEAF=1.00;MQ=56.09;MQ0=3;MQRankSum=-0.997;QD=23.88;ReadPosRankSum=1.335;SOR=0.167 GT:AD:DP:GQ:PL 1/1:5,113:118:99:2846,197,0
CP000253.1 1378402 . T C 1050.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.977;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.6593;MLEAC=1;MLEAF=0.500;MQ=56.93;MQ0=3;MQRankSum=1.559;QD=6.65;ReadPosRankSum=1.259;SOR=0.725 GT:AD:DP:GQ:PL 0/1:95,63:161:99:1079,0,2057
CP000253.1 1378419 . A C 2170.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.285;DP=210;Dels=0.00;ExcessHet=3.0103;FS=3.152;HaplotypeScore=33.0070;MLEAC=1;MLEAF=0.500;MQ=57.66;MQ0=3;MQRankSum=-1.478;QD=10.54;ReadPosRankSum=2.167;SOR=0.839 GT:AD:DP:GQ:PL 0/1:98,108:210:99:2199,0,1725
CP000253.1 1378431 . A G 2499.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.003;DP=239;Dels=0.00;ExcessHet=3.0103;FS=3.109;HaplotypeScore=49.7524;MLEAC=1;MLEAF=0.500;MQ=58.57;MQ0=2;MQRankSum=-0.965;QD=10.59;ReadPosRankSum=2.469;SOR=0.922 GT:AD:DP:GQ:PL 0/1:121,115:238:99:2528,0,2277
CP000253.1 1378434 . A T 2637.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.955;DP=238;Dels=0.00;ExcessHet=3.0103;FS=1.582;HaplotypeScore=54.4229;MLEAC=1;MLEAF=0.500;MQ=58.48;MQ0=2;MQRankSum=-1.378;QD=11.22;ReadPosRankSum=2.563;SOR=0.818 GT:AD:DP:GQ:PL 0/1:117,118:237:99:2666,0,2327
CP000253.1 1378446 . T C 1944.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.371;DP=242;Dels=0.00;ExcessHet=3.0103;FS=4.057;HaplotypeScore=40.6554;MLEAC=1;MLEAF=0.500;MQ=58.36;MQ0=2;MQRankSum=-0.899;QD=8.04;ReadPosRankSum=3.874;SOR=1.014 GT:AD:DP:GQ:PL 0/1:139,103:242:99:1973,0,2805
CP000253.1 1378500 . A T 6353.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=52.3092;MLEAC=2;MLEAF=1.00;MQ=58.44;MQ0=2;QD=26.15;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,243:245:99:6382,463,0
CP000253.1 1378535 . C T 2067.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.077;DP=247;Dels=0.00;ExcessHet=3.0103;FS=14.058;HaplotypeScore=39.3186;MLEAC=1;MLEAF=0.500;MQ=57.56;MQ0=5;MQRankSum=-0.942;QD=8.41;ReadPosRankSum=-0.944;SOR=1.331 GT:AD:DP:GQ:PL 0/1:137,109:247:99:2096,0,2945
CP000253.1 1378560 . G A 1952.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.132;DP=246;Dels=0.00;ExcessHet=3.0103;FS=8.424;HaplotypeScore=62.2507;MLEAC=1;MLEAF=0.500;MQ=57.58;MQ0=5;MQRankSum=-0.091;QD=8.17;ReadPosRankSum=2.544;SOR=1.174 GT:AD:DP:GQ:PL 0/1:142,97:245:99:1981,0,3074
CP000253.1 1378563 . G T 2115.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.181;DP=250;Dels=0.00;ExcessHet=3.0103;FS=12.580;HaplotypeScore=64.7476;MLEAC=1;MLEAF=0.500;MQ=57.43;MQ0=5;MQRankSum=0.127;QD=8.53;ReadPosRankSum=2.899;SOR=1.311 GT:AD:DP:GQ:PL 0/1:145,103:249:99:2144,0,3162
CP000253.1 1378568 . G T 2000.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.519;DP=250;Dels=0.00;ExcessHet=3.0103;FS=7.799;HaplotypeScore=69.5362;MLEAC=1;MLEAF=0.500;MQ=57.39;MQ0=5;MQRankSum=-0.124;QD=8.10;ReadPosRankSum=4.379;SOR=1.268 GT:AD:DP:GQ:PL 0/1:147,100:250:99:2029,0,3220
CP000253.1 1378578 . C T 2834.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.800;DP=248;Dels=0.00;ExcessHet=3.0103;FS=8.085;HaplotypeScore=62.1221;MLEAC=1;MLEAF=0.500;MQ=57.64;MQ0=4;MQRankSum=-5.188;QD=11.57;ReadPosRankSum=1.676;SOR=1.142 GT:AD:DP:GQ:PL 0/1:120,125:248:99:2863,0,2726
CP000253.1 1378593 . G A 2867.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.320;DP=250;Dels=0.00;ExcessHet=3.0103;FS=5.405;HaplotypeScore=25.5527;MLEAC=1;MLEAF=0.500;MQ=57.61;MQ0=4;MQRankSum=4.682;QD=11.66;ReadPosRankSum=-2.640;SOR=0.447 GT:AD:DP:GQ:PL 0/1:123,123:250:99:2896,0,2712
CP000253.1 1378619 . T G 2864.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.139;DP=243;Dels=0.00;ExcessHet=3.0103;FS=2.883;HaplotypeScore=13.6514;MLEAC=1;MLEAF=0.500;MQ=57.83;MQ0=4;MQRankSum=4.937;QD=11.84;ReadPosRankSum=-3.407;SOR=0.523 GT:AD:DP:GQ:PL 0/1:111,131:243:99:2893,0,2525
CP000253.1 1378633 . C T 3541.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.007;DP=245;Dels=0.00;ExcessHet=3.0103;FS=9.796;HaplotypeScore=22.4587;MLEAC=1;MLEAF=0.500;MQ=57.85;MQ0=4;MQRankSum=0.842;QD=14.52;ReadPosRankSum=-3.270;SOR=0.463 GT:AD:DP:GQ:PL 0/1:85,159:245:99:3570,0,1742
CP000253.1 1378711 . C T 1097.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.019;DP=236;Dels=0.00;ExcessHet=3.0103;FS=7.427;HaplotypeScore=39.8953;MLEAC=1;MLEAF=0.500;MQ=58.55;MQ0=2;MQRankSum=-8.153;QD=4.67;ReadPosRankSum=-2.045;SOR=0.611 GT:AD:DP:GQ:PL 0/1:171,64:236:99:1126,0,4175
CP000253.1 1378716 . A G 1006.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.307;DP=234;Dels=0.00;ExcessHet=3.0103;FS=7.541;HaplotypeScore=35.0765;MLEAC=1;MLEAF=0.500;MQ=58.53;MQ0=2;MQRankSum=-8.014;QD=4.32;ReadPosRankSum=-2.692;SOR=0.617 GT:AD:DP:GQ:PL 0/1:171,62:234:99:1035,0,4141
CP000253.1 1378743 . C T 713.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.307;DP=233;Dels=0.00;ExcessHet=3.0103;FS=2.953;HaplotypeScore=28.1926;MLEAC=1;MLEAF=0.500;MQ=59.12;MQ0=0;MQRankSum=-8.679;QD=3.09;ReadPosRankSum=-4.600;SOR=0.725 GT:AD:DP:GQ:PL 0/1:186,45:233:99:742,0,4475
CP000253.1 1378791 . G A 5194.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.788;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6722;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.46;ReadPosRankSum=0.093;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,203:205:99:5223,376,0
CP000253.1 1378986 . A T 5695.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.38;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,208:209:99:5724,409,0
CP000253.1 1379609 . A C 5948.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0818;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.21;ReadPosRankSum=1.412;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,226:227:99:5977,427,0
CP000253.1 1379837 . T C 6271.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7812;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6300,448,0
CP000253.1 1379853 . A C 5714.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.198;DP=238;Dels=0.01;ExcessHet=3.0103;FS=3.029;HaplotypeScore=29.9702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.32;ReadPosRankSum=-0.199;SOR=0.121 GT:AD:DP:GQ:PL 1/1:2,233:236:99:5743,390,0
CP000253.1 1379858 . T A 5547.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.721;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.41;ReadPosRankSum=1.287;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,236:237:99:5576,403,0
CP000253.1 1379894 . T C 5723.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.7194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,233:236:99:5752,409,0
CP000253.1 1379968 . T C 4552.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,172:174:99:4581,331,0
CP000253.1 1380261 . A C 6330.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6359,454,0
CP000253.1 1380276 . A C 6279.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.900;DP=247;Dels=0.00;ExcessHet=3.0103;FS=2.146;HaplotypeScore=27.1646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.42;ReadPosRankSum=1.858;SOR=0.483 GT:AD:DP:GQ:PL 1/1:3,244:247:99:6308,447,0
CP000253.1 1380282 . T C 6379.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.744;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.4204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.72;ReadPosRankSum=-1.181;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,247:248:99:6408,463,0
CP000253.1 1380311 . C T 6658.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4152;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.07;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6687,485,0
CP000253.1 1380363 . A T 6638.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2211;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.32;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,243:244:99:6667,482,0
CP000253.1 1380369 . A G 6737.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.912;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.50;ReadPosRankSum=0.898;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,244:248:99:6766,491,0
CP000253.1 1380402 . A G 6464.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.731;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.9984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.86;ReadPosRankSum=-0.707;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6493,475,0
CP000253.1 1380432 . G A 6587.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6616,479,0
CP000253.1 1380543 . T C 6135.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.738;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.1108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.11;ReadPosRankSum=0.221;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,234:236:99:6164,442,0
CP000253.1 1380544 . T A 6296.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.764;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.9429;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.79;ReadPosRankSum=1.622;SOR=0.333 GT:AD:DP:GQ:PL 1/1:1,234:236:99:6325,460,0
CP000253.1 1380568 . A G 6581.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2580;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6610,479,0
CP000253.1 1380573 . G T 6739.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.29;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6768,485,0
CP000253.1 1380626 . C G 6516.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.852;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4428;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.71;ReadPosRankSum=0.958;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,243:244:99:6545,470,0
CP000253.1 1380824 . C T 5460.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.738;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.76;ReadPosRankSum=0.090;SOR=0.423 GT:AD:DP:GQ:PL 1/1:1,211:214:99:5489,391,0
CP000253.1 1380945 . C T 4953.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.497;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2741;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;MQRankSum=13.226;QD=24.77;ReadPosRankSum=3.886;SOR=0.519 GT:AD:DP:GQ:PL 1/1:7,193:200:99:4982,244,0
CP000253.1 1381071 . A C 3694.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.038;DP=171;Dels=0.01;ExcessHet=3.0103;FS=1.113;HaplotypeScore=34.5121;MLEAC=2;MLEAF=1.00;MQ=59.10;MQ0=0;MQRankSum=11.227;QD=21.99;ReadPosRankSum=-1.128;SOR=0.482 GT:AD:DP:GQ:PL 1/1:13,155:170:70:3723,70,0
CP000253.1 1381073 . A C 3755.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.702;DP=173;Dels=0.00;ExcessHet=3.0103;FS=1.218;HaplotypeScore=26.4694;MLEAC=2;MLEAF=1.00;MQ=59.11;MQ0=0;MQRankSum=11.165;QD=21.84;ReadPosRankSum=-0.582;SOR=0.397 GT:AD:DP:GQ:PL 1/1:11,161:173:99:3784,122,0
CP000253.1 1381077 . T C 3925.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.577;DP=171;Dels=0.00;ExcessHet=3.0103;FS=1.214;HaplotypeScore=25.9574;MLEAC=2;MLEAF=1.00;MQ=59.42;MQ0=0;MQRankSum=10.955;QD=23.23;ReadPosRankSum=-1.572;SOR=0.768 GT:AD:DP:GQ:PL 1/1:11,158:171:99:3954,141,0
CP000253.1 1381104 . A T 3901.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.305;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9349;MLEAC=2;MLEAF=1.00;MQ=59.31;MQ0=0;MQRankSum=11.408;QD=23.09;ReadPosRankSum=-0.774;SOR=0.591 GT:AD:DP:GQ:PL 1/1:9,160:169:99:3930,173,0
CP000253.1 1381155 . T C 2604.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.422;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.1436;MLEAC=2;MLEAF=1.00;MQ=59.31;MQ0=0;MQRankSum=8.383;QD=24.12;ReadPosRankSum=1.274;SOR=0.423 GT:AD:DP:GQ:PL 1/1:6,102:108:99:2633,135,0
CP000253.1 1381308 . G T 4250.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3903;MLEAC=2;MLEAF=1.00;MQ=59.43;MQ0=0;QD=27.60;SOR=1.157 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4279,307,0
CP000253.1 1381313 . C A 4271.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.840;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7134;MLEAC=2;MLEAF=1.00;MQ=59.44;MQ0=0;MQRankSum=-0.145;QD=27.21;ReadPosRankSum=-0.386;SOR=0.396 GT:AD:DP:GQ:PL 1/1:1,156:157:99:4300,313,0
CP000253.1 1381317 . T A 4198.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1589;MLEAC=2;MLEAF=1.00;MQ=59.43;MQ0=0;QD=26.92;SOR=1.114 GT:AD:DP:GQ:PL 1/1:0,156:156:99:4227,307,0
CP000253.1 1381359 . G A 4427.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=52.2081;MLEAC=2;MLEAF=1.00;MQ=58.68;MQ0=0;QD=27.85;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,159:160:99:4456,322,0
CP000253.1 1381360 . T C 4273.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.859;DP=162;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=58.9668;MLEAC=2;MLEAF=1.00;MQ=58.68;MQ0=0;MQRankSum=-0.248;QD=26.88;ReadPosRankSum=-1.101;SOR=0.361 GT:AD:DP:GQ:PL 1/1:1,158:160:99:4302,316,0
CP000253.1 1381361 . T C 4208.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.879;DP=162;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=56.1373;MLEAC=2;MLEAF=1.00;MQ=58.68;MQ0=0;MQRankSum=-0.248;QD=26.47;ReadPosRankSum=-1.188;SOR=0.361 GT:AD:DP:GQ:PL 1/1:1,158:160:99:4237,310,0
CP000253.1 1381362 . A T 4221.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.692;DP=162;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=63.2360;MLEAC=2;MLEAF=1.00;MQ=58.68;MQ0=0;MQRankSum=-0.370;QD=26.72;ReadPosRankSum=-0.257;SOR=0.178 GT:AD:DP:GQ:PL 1/1:2,156:159:99:4250,304,0
CP000253.1 1381368 . A G 4868.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.0520;MLEAC=2;MLEAF=1.00;MQ=58.83;MQ0=0;QD=26.75;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4897,355,0
CP000253.1 1381419 . T C 5338.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5385;MLEAC=2;MLEAF=1.00;MQ=59.02;MQ0=0;QD=25.79;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,207:208:99:5367,391,0
CP000253.1 1381434 . G A 5395.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.390;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0676;MLEAC=2;MLEAF=1.00;MQ=59.05;MQ0=0;MQRankSum=4.030;QD=25.10;ReadPosRankSum=0.564;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,214:216:99:5424,394,0
CP000253.1 1381449 . C A 5148.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.911;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.8025;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;MQRankSum=4.030;QD=23.95;ReadPosRankSum=0.226;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,214:218:99:5177,347,0
CP000253.1 1381451 . C A 5116.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.071;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8052;MLEAC=2;MLEAF=1.00;MQ=59.07;MQ0=0;MQRankSum=3.742;QD=23.80;ReadPosRankSum=-1.092;SOR=0.823 GT:AD:DP:GQ:PL 1/1:4,211:220:99:5145,349,0
CP000253.1 1381455 . C T 5432.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.903;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8654;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;MQRankSum=4.030;QD=25.27;ReadPosRankSum=0.016;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,214:218:99:5461,388,0
CP000253.1 1381461 . C T 5624.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8170;MLEAC=2;MLEAF=1.00;MQ=59.12;MQ0=0;MQRankSum=-0.207;QD=25.34;ReadPosRankSum=-1.272;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,221:222:99:5653,403,0
CP000253.1 1381542 . G A 5838.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2899;MLEAC=2;MLEAF=1.00;MQ=59.70;MQ0=0;QD=25.72;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,227:229:99:5867,418,0
CP000253.1 1381563 . A G 6035.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5043;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=-0.076;QD=25.90;ReadPosRankSum=-0.112;SOR=0.230 GT:AD:DP:GQ:PL 1/1:1,232:236:99:6064,436,0
CP000253.1 1381686 . T A 6069.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1020;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.72;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,219:220:99:6098,442,0
CP000253.1 1381785 . A T 6270.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6299,448,0
CP000253.1 1382165 . A C 5131.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.483;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.53;ReadPosRankSum=0.330;SOR=0.116 GT:AD:DP:GQ:PL 1/1:2,199:201:99:5160,370,0
CP000253.1 1382272 . G A 5927.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.939;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8869;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.66;ReadPosRankSum=1.732;SOR=0.294 GT:AD:DP:GQ:PL 1/1:1,230:231:99:5956,424,0
CP000253.1 1382370 . A G 6312.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3735;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,241:244:99:6341,460,0
CP000253.1 1382382 . C T 6673.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,246:248:99:6702,482,0
CP000253.1 1382409 . C T 6672.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.02;SOR=0.858 GT:AD:DP:GQ:PL 1/1:0,247:248:99:6701,482,0
CP000253.1 1382453 . T C 6532.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9078;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=26.99;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,242:244:99:6561,473,0
CP000253.1 1382458 . G A 6716.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7167;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=27.30;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,246:248:99:6745,485,0
CP000253.1 1382790 . G A 6835.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.90;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,245:246:99:6864,506,0
CP000253.1 1383261 . T G 6238.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.891;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.89;ReadPosRankSum=0.367;SOR=0.358 GT:AD:DP:GQ:PL 1/1:1,240:241:99:6267,445,0
CP000253.1 1383287 . G T 6706.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.93;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6735,488,0
CP000253.1 1383721 . G A 4468.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8526;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.11;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,159:162:99:4497,325,0
CP000253.1 1383727 . G T 4251.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3377;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4280,310,0
CP000253.1 1383876 . C T 6128.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.916;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.4471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.43;ReadPosRankSum=0.812;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,240:242:99:6157,436,0
CP000253.1 1383912 . T G 5845.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.386;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.8179;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.88;ReadPosRankSum=0.240;SOR=0.307 GT:AD:DP:GQ:PL 1/1:2,233:235:99:5874,421,0
CP000253.1 1383915 . C T 5970.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.663;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.7666;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.63;ReadPosRankSum=-0.817;SOR=0.811 GT:AD:DP:GQ:PL 1/1:2,231:234:99:5999,427,0
CP000253.1 1383938 . C T 6150.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.817 GT:AD:DP:GQ:PL 1/1:0,238:238:99:6179,439,0
CP000253.1 1383972 . T A 5501.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.677;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8865;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=0.733;SOR=0.436 GT:AD:DP:GQ:PL 1/1:1,214:216:99:5530,397,0
CP000253.1 1383975 . T A 5676.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5705,406,0
CP000253.1 1383978 . T G 5540.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.429;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.65;ReadPosRankSum=0.040;SOR=0.811 GT:AD:DP:GQ:PL 1/1:2,214:216:99:5569,372,0
CP000253.1 1384066 . G A 5452.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7546;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,201:201:99:5481,394,0
CP000253.1 1384077 . A G 5395.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5479;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.67;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,195:195:99:5424,391,0
CP000253.1 1384080 . A G 5296.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1712;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,199:200:99:5325,382,0
CP000253.1 1384098 . G C 5593.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5007;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.89;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,208:210:99:5622,409,0
CP000253.1 1384110 . G A 5885.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.00;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5914,424,0
CP000253.1 1384136 . T C 5542.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,220:221:99:5571,403,0
CP000253.1 1384191 . C A 5583.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0407;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.27;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,221:221:99:5612,403,0
CP000253.1 1384215 . A T 5636.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.769;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4927;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=25.05;ReadPosRankSum=-0.616;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,224:225:99:5665,403,0
CP000253.1 1384245 . A G 5800.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5982;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.67;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,226:228:99:5829,421,0
CP000253.1 1384248 . G A 5425.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6768;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.12;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,216:219:99:5454,391,0
CP000253.1 1384275 . T A 5455.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.122;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9146;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=-0.078;QD=24.58;ReadPosRankSum=1.498;SOR=0.483 GT:AD:DP:GQ:PL 1/1:3,219:222:99:5484,394,0
CP000253.1 1384290 . T C 4202.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.173;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.9867;MLEAC=1;MLEAF=0.500;MQ=59.84;MQ0=0;MQRankSum=2.468;QD=16.95;ReadPosRankSum=13.011;SOR=0.693 GT:AD:DP:GQ:PL 0/1:88,160:248:99:4231,0,1447
CP000253.1 1384311 . T C 1482.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.529;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.483;HaplotypeScore=25.4611;MLEAC=1;MLEAF=0.500;MQ=59.77;MQ0=0;MQRankSum=-3.070;QD=6.00;ReadPosRankSum=-9.795;SOR=0.641 GT:AD:DP:GQ:PL 0/1:158,89:249:99:1511,0,4272
CP000253.1 1384341 . C A 4219.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.781;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9898;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=0.000;QD=28.13;ReadPosRankSum=1.571;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,149:152:99:4248,322,0
CP000253.1 1384349 . G T 4534.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8987;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=31.06;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,146:146:99:4563,337,0
CP000253.1 1384367 . T C 4058.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2441;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.79;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,141:142:99:4087,301,0
CP000253.1 1384384 . A G 4046.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.50;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,142:143:99:4075,298,0
CP000253.1 1384416 . C T 4194.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.34;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,148:151:99:4223,307,0
CP000253.1 1384428 . T A 4509.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.743;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.84;ReadPosRankSum=-0.464;SOR=0.397 GT:AD:DP:GQ:PL 1/1:1,167:168:99:4538,337,0
CP000253.1 1384470 . C T 4866.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2233;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.50;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4895,355,0
CP000253.1 1384485 . G A 4650.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6735;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,178:180:99:4679,337,0
CP000253.1 1384509 . T C 5215.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.31;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,191:193:99:5244,376,0
CP000253.1 1384680 . G A 5297.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.729;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0308;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=-0.695;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,206:208:99:5326,382,0
CP000253.1 1384773 . T G 5196.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.64;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,188:188:99:5225,379,0
CP000253.1 1384788 . T C 5026.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.17;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,185:186:99:5055,367,0
CP000253.1 1384803 . G A 5231.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9698;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.25;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,192:196:99:5260,382,0
CP000253.1 1384806 . A T 5182.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,192:193:99:5211,373,0
CP000253.1 1384926 . C T 3378.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2152;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,127:128:99:3407,241,0
CP000253.1 1385092 . G T 3337.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.53;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3366,247,0
CP000253.1 1385577 . C T 4560.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6521;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4589,331,0
CP000253.1 1385806 . G C 6152.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.5806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,240:241:99:6181,451,0
CP000253.1 1385859 . A G 6276.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2218;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,240:241:99:6305,454,0
CP000253.1 1385864 . G A 5934.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.703;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.73;ReadPosRankSum=-1.581;SOR=0.344 GT:AD:DP:GQ:PL 1/1:1,239:241:99:5963,433,0
CP000253.1 1385937 . A C 6200.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.171;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.62;ReadPosRankSum=-0.494;SOR=0.108 GT:AD:DP:GQ:PL 1/1:3,239:242:99:6229,448,0
CP000253.1 1385955 . T C 6172.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.586;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.61;ReadPosRankSum=1.317;SOR=0.719 GT:AD:DP:GQ:PL 1/1:4,237:243:99:6201,448,0
CP000253.1 1385958 . T C 6231.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.4822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6260,454,0
CP000253.1 1386003 . A T 6536.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.0791;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,243:243:99:6565,478,0
CP000253.1 1386021 . G A 6592.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4617;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6621,479,0
CP000253.1 1386027 . T C 6586.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3493;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6615,476,0
CP000253.1 1386042 . G A 6724.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.12;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6753,491,0
CP000253.1 1386052 . C T 6809.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.68;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6838,488,0
CP000253.1 1386123 . A T 6696.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.33;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,245:245:99:6725,482,0
CP000253.1 1386129 . A T 6714.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.97;ReadPosRankSum=1.218;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,248:249:99:6743,482,0
CP000253.1 1386137 . T G 6512.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.403;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0225;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.16;ReadPosRankSum=1.075;SOR=0.768 GT:AD:DP:GQ:PL 1/1:2,247:250:99:6541,478,0
CP000253.1 1386158 . C T 6459.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6211;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6488,466,0
CP000253.1 1386171 . G A 6304.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,241:242:99:6333,454,0
CP000253.1 1386174 . G A 6248.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6277,451,0
CP000253.1 1386213 . A T 6727.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6756,482,0
CP000253.1 1386267 . C T 6635.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2154;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.53;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,241:242:99:6664,479,0
CP000253.1 1386285 . G A 6550.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.709;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.18;ReadPosRankSum=-1.424;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,240:248:99:6579,482,0
CP000253.1 1386318 . T A 4380.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.432;DP=249;Dels=0.00;ExcessHet=3.0103;FS=1.729;HaplotypeScore=19.6750;MLEAC=1;MLEAF=0.500;MQ=57.29;MQ0=2;MQRankSum=9.995;QD=17.66;ReadPosRankSum=8.411;SOR=0.852 GT:AD:DP:GQ:PL 0/1:86,162:249:99:4409,0,1400
CP000253.1 1386389 . C T 5366.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0908;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=30.15;SOR=1.026 GT:AD:DP:GQ:PL 1/1:0,178:180:99:5395,394,0
CP000253.1 1386396 . T A 5128.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.792;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0777;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=13.304;QD=29.14;ReadPosRankSum=0.217;SOR=0.366 GT:AD:DP:GQ:PL 1/1:1,175:177:99:5157,382,0
CP000253.1 1386398 . T C 5221.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8737;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=29.84;SOR=0.988 GT:AD:DP:GQ:PL 1/1:0,175:177:99:5250,388,0
CP000253.1 1386423 . A G 5598.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.701;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.62;ReadPosRankSum=-1.054;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,188:190:99:5627,389,0
CP000253.1 1386438 . T A 5352.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.329;DP=190;Dels=0.00;ExcessHet=3.0103;FS=3.632;HaplotypeScore=14.8619;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.47;ReadPosRankSum=0.797;SOR=0.578 GT:AD:DP:GQ:PL 1/1:2,186:190:99:5381,372,0
CP000253.1 1386444 . T C 5140.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.436;DP=182;Dels=0.00;ExcessHet=3.0103;FS=3.572;HaplotypeScore=13.0463;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.25;ReadPosRankSum=1.296;SOR=0.552 GT:AD:DP:GQ:PL 1/1:2,180:182:99:5169,382,0
CP000253.1 1386446 . A T 5297.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.43;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,180:180:99:5326,391,0
CP000253.1 1386447 . C T 5382.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.90;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,180:180:99:5411,397,0
CP000253.1 1386456 . T C 5558.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.837;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3959;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.10;ReadPosRankSum=0.172;SOR=0.643 GT:AD:DP:GQ:PL 1/1:1,190:191:99:5587,412,0
CP000253.1 1386470 . G A 5652.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.41;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,199:201:99:5681,424,0
CP000253.1 1386489 . T A 5880.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.833;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.14;ReadPosRankSum=1.202;SOR=0.673 GT:AD:DP:GQ:PL 1/1:1,208:210:99:5909,433,0
CP000253.1 1386500 . T A 5565.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.658;DP=200;Dels=0.00;ExcessHet=3.0103;FS=3.499;HaplotypeScore=18.2788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.25;ReadPosRankSum=-1.038;SOR=0.630 GT:AD:DP:GQ:PL 1/1:1,196:200:99:5594,412,0
CP000253.1 1386501 . T C 5724.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.543;DP=202;Dels=0.00;ExcessHet=3.0103;FS=3.622;HaplotypeScore=18.2788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.34;ReadPosRankSum=0.766;SOR=0.620 GT:AD:DP:GQ:PL 1/1:2,200:202:99:5753,399,0
CP000253.1 1386546 . A T 5411.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.814;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.75;ReadPosRankSum=0.542;SOR=0.331 GT:AD:DP:GQ:PL 1/1:1,194:195:99:5440,391,0
CP000253.1 1386548 . T A 5174.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.171;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7346;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.09;ReadPosRankSum=-0.495;SOR=0.711 GT:AD:DP:GQ:PL 1/1:3,188:192:99:5203,338,0
CP000253.1 1386549 . T A 5147.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.376;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.09;ReadPosRankSum=0.301;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,189:192:99:5176,379,0
CP000253.1 1386552 . A G 5182.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8792;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,190:191:99:5211,376,0
CP000253.1 1386553 . C T 5238.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.57;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,190:191:99:5267,382,0
CP000253.1 1386619 . T G 6109.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.905;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.7135;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.46;ReadPosRankSum=0.281;SOR=0.379 GT:AD:DP:GQ:PL 1/1:3,237:240:99:6138,445,0
CP000253.1 1386720 . C T 6351.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6960;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6380,448,0
CP000253.1 1386837 . A C 5040.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.742;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.4470;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.23;ReadPosRankSum=0.525;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,207:210:99:5069,361,0
CP000253.1 1386888 . A G 4889.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.964;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6300;MLEAC=2;MLEAF=1.00;MQ=59.20;MQ0=0;MQRankSum=-0.272;QD=30.18;ReadPosRankSum=-0.227;SOR=0.228 GT:AD:DP:GQ:PL 1/1:1,161:163:99:4918,361,0
CP000253.1 1386901 . T C 3888.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.096;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=116.6420;MLEAC=1;MLEAF=0.500;MQ=59.22;MQ0=0;MQRankSum=2.156;QD=15.87;ReadPosRankSum=13.866;SOR=0.690 GT:AD:DP:GQ:PL 0/1:106,139:245:99:3917,0,2093
CP000253.1 1386902 . T G 3996.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.055;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=222.1675;MLEAC=1;MLEAF=0.500;MQ=59.23;MQ0=0;MQRankSum=2.181;QD=16.05;ReadPosRankSum=12.834;SOR=0.685 GT:AD:DP:GQ:PL 0/1:107,142:249:99:4025,0,2068
CP000253.1 1386914 . T C 1973.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.391;DP=245;Dels=0.00;ExcessHet=3.0103;FS=2.200;HaplotypeScore=210.8410;MLEAC=1;MLEAF=0.500;MQ=59.32;MQ0=0;MQRankSum=-2.461;QD=8.09;ReadPosRankSum=-9.205;SOR=0.669 GT:AD:DP:GQ:PL 0/1:145,99:245:99:2002,0,3911
CP000253.1 1386921 . T A 3964.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.573;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.469;HaplotypeScore=110.3292;MLEAC=1;MLEAF=0.500;MQ=59.02;MQ0=0;MQRankSum=4.251;QD=16.05;ReadPosRankSum=8.838;SOR=0.703 GT:AD:DP:GQ:PL 0/1:103,144:247:99:3993,0,2122
CP000253.1 1386940 . G A 4545.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.718;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=31.14;ReadPosRankSum=1.650;SOR=0.333 GT:AD:DP:GQ:PL 1/1:1,145:146:99:4574,343,0
CP000253.1 1387003 . T G 4985.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.497;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.16;ReadPosRankSum=-0.182;SOR=0.705 GT:AD:DP:GQ:PL 1/1:2,169:171:99:5014,373,0
CP000253.1 1387029 . T A 5713.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.329;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.2368;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.29;ReadPosRankSum=0.195;SOR=0.776 GT:AD:DP:GQ:PL 1/1:2,200:202:99:5742,427,0
CP000253.1 1387118 . C G 6316.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1000;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=26.65;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,237:237:99:6345,457,0
CP000253.1 1387145 . A C 6229.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.607;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.97;ReadPosRankSum=2.153;SOR=0.121 GT:AD:DP:GQ:PL 1/1:2,229:231:99:6258,454,0
CP000253.1 1387224 . G A 6277.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1231;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.41;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,229:233:99:6306,457,0
CP000253.1 1387227 . G T 6350.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.4316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.73;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,229:229:99:6379,461,0
CP000253.1 1387263 . C T 6427.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.862;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.8044;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=27.47;ReadPosRankSum=0.585;SOR=0.234 GT:AD:DP:GQ:PL 1/1:1,233:234:99:6456,467,0
CP000253.1 1387311 . A G 4983.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9284;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.82;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,193:194:99:5012,367,0
CP000253.1 1387326 . T C 4994.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2747;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.88;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,193:195:99:5023,364,0
CP000253.1 1387368 . A G 5204.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.1304;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,200:202:99:5233,376,0
CP000253.1 1387375 . A G 5122.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1114;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,196:198:99:5151,376,0
CP000253.1 1387389 . A T 5397.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3021;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,194:194:99:5426,391,0
CP000253.1 1387392 . G A 5323.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7461;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.87;ReadPosRankSum=0.000;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,190:193:99:5352,388,0
CP000253.1 1387394 . C T 5416.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5351;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.78;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,195:195:99:5445,391,0
CP000253.1 1387413 . G A 5571.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.8496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,216:220:99:5600,400,0
CP000253.1 1387522 . T A 5379.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.757;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.3660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.99;ReadPosRankSum=1.373;SOR=0.313 GT:AD:DP:GQ:PL 1/1:1,206:209:99:5408,397,0
CP000253.1 1387576 . C T 5458.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.1280;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,210:210:99:5487,394,0
CP000253.1 1387588 . G T 5279.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.595;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4968;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.67;ReadPosRankSum=1.098;SOR=0.128 GT:AD:DP:GQ:PL 1/1:2,196:198:99:5308,382,0
CP000253.1 1387800 . A T 4495.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6713;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.69;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4524,322,0
CP000253.1 1387857 . A C 4436.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.8233;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.95;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,171:173:99:4465,319,0
CP000253.1 1387895 . C A 4208.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.150;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.9634;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=0.000;QD=24.76;ReadPosRankSum=2.709;SOR=0.243 GT:AD:DP:GQ:PL 1/1:4,166:171:99:4237,307,0
CP000253.1 1387934 . T G 4234.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.533;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0620;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=-0.056;QD=26.63;ReadPosRankSum=-0.070;SOR=0.130 GT:AD:DP:GQ:PL 1/1:2,157:159:99:4263,307,0
CP000253.1 1387938 . G T 4238.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1679;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=26.83;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,158:159:99:4267,304,0
CP000253.1 1387947 . A C 4411.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.592;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3635;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=-0.054;QD=25.80;ReadPosRankSum=1.674;SOR=0.427 GT:AD:DP:GQ:PL 1/1:2,169:171:99:4440,322,0
CP000253.1 1387968 . A G 4231.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.8888;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=24.32;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,174:175:99:4260,313,0
CP000253.1 1387995 . G A 4659.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.782;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5279;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=0.000;QD=26.94;ReadPosRankSum=-1.442;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,172:174:99:4688,340,0
CP000253.1 1388013 . C G 4419.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4164;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=13.229;QD=25.40;ReadPosRankSum=-0.139;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,173:175:99:4448,322,0
CP000253.1 1388037 . C T 4655.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.745;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.91;ReadPosRankSum=1.432;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,172:174:99:4684,340,0
CP000253.1 1388103 . A G 4100.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4456;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;QD=26.63;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,154:156:99:4129,307,0
CP000253.1 1388130 . T C 4513.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.0074;MLEAC=2;MLEAF=1.00;MQ=59.83;MQ0=0;QD=27.03;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,167:168:99:4542,334,0
CP000253.1 1388184 . A C 4709.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.5386;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,184:186:99:4738,343,0
CP000253.1 1388202 . A T 4577.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.4340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4606,334,0
CP000253.1 1388235 . T G 5033.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.437;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.9145;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.55;ReadPosRankSum=-0.293;SOR=0.857 GT:AD:DP:GQ:PL 1/1:2,195:197:99:5062,370,0
CP000253.1 1388265 . A G 4796.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4994;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,195:197:99:4825,346,0
CP000253.1 1388286 . A T 5118.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.848;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4526;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.09;ReadPosRankSum=-0.127;SOR=0.366 GT:AD:DP:GQ:PL 1/1:1,203:204:99:5147,367,0
CP000253.1 1388289 . G T 4990.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.703;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=-0.165;SOR=0.402 GT:AD:DP:GQ:PL 1/1:1,199:200:99:5019,361,0
CP000253.1 1388343 . A C 5423.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.647;DP=219;Dels=0.00;ExcessHet=3.0103;FS=3.153;HaplotypeScore=28.9726;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.99;ReadPosRankSum=0.878;SOR=0.342 GT:AD:DP:GQ:PL 1/1:1,216:219:99:5452,366,0
CP000253.1 1388505 . G A 5575.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,208:210:99:5604,400,0
CP000253.1 1388514 . T A 5261.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0604;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,202:202:99:5290,379,0
CP000253.1 1388515 . G T 5294.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,202:202:99:5323,382,0
CP000253.1 1388568 . T A 6455.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5545;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.57;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,243:247:99:6484,466,0
CP000253.1 1388631 . C T 6721.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.10;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6750,482,0
CP000253.1 1388694 . C T 6711.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.7184;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6740,485,0
CP000253.1 1388739 . T A 6299.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.763;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=39.8415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.82;ReadPosRankSum=0.185;SOR=0.424 GT:AD:DP:GQ:PL 1/1:1,243:245:99:6328,454,0
CP000253.1 1388802 . A G 6664.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.8417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.31;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,244:245:99:6693,479,0
CP000253.1 1388862 . T A 6676.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.7740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.14;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6705,482,0
CP000253.1 1388878 . C T 6706.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.7283;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.49;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,244:246:99:6735,485,0
CP000253.1 1388943 . A T 6379.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.3309;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,244:246:99:6408,463,0
CP000253.1 1388968 . C T 6487.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.5947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,244:244:99:6516,464,0
CP000253.1 1388985 . C A 5911.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.616;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0913;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.48;ReadPosRankSum=-0.553;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,231:233:99:5940,408,0
CP000253.1 1389013 . A G 6015.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.764;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.3609;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.71;ReadPosRankSum=1.266;SOR=0.264 GT:AD:DP:GQ:PL 1/1:1,233:235:99:6044,436,0
CP000253.1 1389087 . A G 5231.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8851;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,211:213:99:5260,376,0
CP000253.1 1389147 . T C 5274.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6071;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,200:201:99:5303,379,0
CP000253.1 1389280 . G A 4576.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.08;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,169:172:99:4605,328,0
CP000253.1 1389318 . G A 4898.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.99;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,175:177:99:4927,358,0
CP000253.1 1389426 . C T 4787.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.899;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.67;ReadPosRankSum=-1.443;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,166:167:99:4816,355,0
CP000253.1 1389436 . C T 4906.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9067;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.53;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4935,358,0
CP000253.1 1389537 . A C 5628.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=4.013;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.6057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=2.431;SOR=0.081 GT:AD:DP:GQ:PL 1/1:5,215:222:99:5657,389,0
CP000253.1 1389569 . T C 5814.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.748;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.64;ReadPosRankSum=0.507;SOR=0.264 GT:AD:DP:GQ:PL 1/1:1,235:238:99:5843,418,0
CP000253.1 1389582 . T A 6125.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.386;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.42;ReadPosRankSum=-0.632;SOR=0.701 GT:AD:DP:GQ:PL 1/1:2,239:242:99:6154,445,0
CP000253.1 1389585 . A T 6429.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.776;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.24;ReadPosRankSum=-0.976;SOR=0.329 GT:AD:DP:GQ:PL 1/1:1,244:247:99:6458,466,0
CP000253.1 1389588 . G A 6563.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.5104;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6592,476,0
CP000253.1 1389672 . A T 6487.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.6061;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.59;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,244:245:99:6516,475,0
CP000253.1 1389675 . T C 6193.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.810;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=41.4527;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=25.28;ReadPosRankSum=1.711;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,244:246:99:6222,451,0
CP000253.1 1389772 . C T 6308.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3853;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,239:239:99:6337,451,0
CP000253.1 1389867 . G A 4877.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0144;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.81;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,189:191:99:4906,349,0
CP000253.1 1389954 . C T 5125.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7691;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=26.84;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,191:191:99:5154,367,0
CP000253.1 1389987 . T A 5523.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.551;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1416;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.69;ReadPosRankSum=1.920;SOR=0.570 GT:AD:DP:GQ:PL 1/1:2,213:215:99:5552,397,0
CP000253.1 1389988 . G A 5515.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5544,394,0
CP000253.1 1390061 . C T 6368.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6397,454,0
CP000253.1 1390101 . G T 6004.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,236:238:99:6033,424,0
CP000253.1 1390182 . A T 5229.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.7129;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,212:213:99:5258,370,0
CP000253.1 1390251 . C T 4710.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.014;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8830;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.79;ReadPosRankSum=1.386;SOR=0.447 GT:AD:DP:GQ:PL 1/1:1,189:191:99:4739,337,0
CP000253.1 1390301 . A C 4438.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4467,322,0
CP000253.1 1390320 . T A 4182.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0858;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.16;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,154:156:99:4211,307,0
CP000253.1 1390392 . G A 3974.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.34;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,131:131:99:4003,298,0
CP000253.1 1390401 . G C 4022.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.02;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4051,301,0
CP000253.1 1390402 . T G 3986.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.75;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4015,298,0
CP000253.1 1390437 . G A 4176.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.5778;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.66;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,151:154:99:4205,307,0
CP000253.1 1390450 . T C 4209.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.529;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4319;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.81;ReadPosRankSum=-0.133;SOR=0.553 GT:AD:DP:GQ:PL 1/1:2,155:157:99:4238,310,0
CP000253.1 1390479 . T A 4584.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.79;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,165:166:99:4613,337,0
CP000253.1 1390485 . A C 5052.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.494;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5626;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.46;ReadPosRankSum=-0.668;SOR=0.883 GT:AD:DP:GQ:PL 1/1:2,182:185:99:5081,373,0
CP000253.1 1390554 . T G 5915.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.279;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=42.8699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.28;ReadPosRankSum=0.872;SOR=0.362 GT:AD:DP:GQ:PL 1/1:4,230:234:99:5944,433,0
CP000253.1 1391169 . A T 5167.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,204:205:99:5196,367,0
CP000253.1 1391172 . A T 5240.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,199:202:99:5269,373,0
CP000253.1 1391190 . T G 4699.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.658;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.8005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.87;ReadPosRankSum=-1.366;SOR=0.685 GT:AD:DP:GQ:PL 1/1:1,188:189:99:4728,337,0
CP000253.1 1391265 . A T 2517.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7457;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2546,181,0
CP000253.1 1391267 . C T 2486.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8790;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2515,178,0
CP000253.1 1391268 . A C 2511.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2540,184,0
CP000253.1 1391297 . T C 2460.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.754;DP=103;Dels=0.00;ExcessHet=3.0103;FS=3.488;HaplotypeScore=22.3972;MLEAC=2;MLEAF=1.00;MQ=59.72;MQ0=0;MQRankSum=7.142;QD=24.13;ReadPosRankSum=2.064;SOR=0.466 GT:AD:DP:GQ:PL 1/1:2,100:103:99:2489,178,0
CP000253.1 1391301 . G A 2575.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5035;MLEAC=2;MLEAF=1.00;MQ=59.72;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=0.154;SOR=0.618 GT:AD:DP:GQ:PL 1/1:1,100:103:99:2604,187,0
CP000253.1 1391403 . A G 2432.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.65;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2461,181,0
CP000253.1 1391406 . T C 2271.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2300,169,0
CP000253.1 1391411 . G A 2375.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.95;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,85:86:99:2404,175,0
CP000253.1 1391412 . T A 2413.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.40;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,85:86:99:2442,181,0
CP000253.1 1391418 . T C 2335.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8448;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.16;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2364,175,0
CP000253.1 1391420 . T C 2401.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9781;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2430,175,0
CP000253.1 1391474 . T C 3285.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3314,238,0
CP000253.1 1391475 . C T 3163.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3192,226,0
CP000253.1 1391487 . A C 3805.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3834,277,0
CP000253.1 1391505 . A T 4340.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1978;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.30;SOR=1.088 GT:AD:DP:GQ:PL 1/1:0,159:161:99:4369,310,0
CP000253.1 1391645 . A T 5762.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6766;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,234:234:99:5791,406,0
CP000253.1 1391714 . C T 5947.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6288;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,233:234:99:5976,427,0
CP000253.1 1391718 . A T 5942.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,228:229:99:5971,421,0
CP000253.1 1391742 . C A 5668.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.874;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.53;ReadPosRankSum=1.022;SOR=0.536 GT:AD:DP:GQ:PL 1/1:1,221:228:99:5697,409,0
CP000253.1 1391772 . A G 5250.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4509;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,200:204:99:5279,376,0
CP000253.1 1391775 . T G 5527.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.754;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4509;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.58;ReadPosRankSum=0.816;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,207:208:99:5556,397,0
CP000253.1 1391783 . T C 5531.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9784;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,208:210:99:5560,403,0
CP000253.1 1391826 . A G 4795.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.776;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=0.334;SOR=0.341 GT:AD:DP:GQ:PL 1/1:1,191:193:99:4824,343,0
CP000253.1 1391837 . T C 4641.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4670,334,0
CP000253.1 1391838 . A G 4565.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0720;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,185:186:99:4594,322,0
CP000253.1 1391841 . C T 4741.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4770,340,0
CP000253.1 1391864 . T C 5023.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,194:196:99:5052,358,0
CP000253.1 1391868 . A T 5170.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3142;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,202:202:99:5199,367,0
CP000253.1 1391913 . G T 5308.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.4835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,203:204:99:5337,382,0
CP000253.1 1391946 . T C 5717.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.5817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,223:225:99:5746,409,0
CP000253.1 1392066 . C T 6666.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.10;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,246:248:99:6695,479,0
CP000253.1 1392164 . T C 6542.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6384;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.20;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,232:232:99:6571,476,0
CP000253.1 1392224 . C A 6773.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=249;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.76;ReadPosRankSum=1.534;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,243:247:99:6802,497,0
CP000253.1 1392245 . T A 6705.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.607;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.8338;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.93;ReadPosRankSum=0.947;SOR=0.132 GT:AD:DP:GQ:PL 1/1:2,247:250:99:6734,488,0
CP000253.1 1392306 . T A 6309.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.814;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1507;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.75;ReadPosRankSum=0.410;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,244:246:99:6338,460,0
CP000253.1 1392318 . T C 6262.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4885;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.76;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,234:236:99:6291,454,0
CP000253.1 1392357 . T A 6081.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,235:235:99:6110,439,0
CP000253.1 1392358 . T A 6078.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.493;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.87;ReadPosRankSum=0.857;SOR=0.791 GT:AD:DP:GQ:PL 1/1:2,233:235:99:6107,439,0
CP000253.1 1392438 . C T 5776.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.74;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,216:218:99:5805,415,0
CP000253.1 1392522 . A G 5606.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.76;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,202:203:99:5635,412,0
CP000253.1 1392525 . A G 5693.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.91;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,204:205:99:5722,412,0
CP000253.1 1392575 . T G 5108.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.638;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.3170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.07;ReadPosRankSum=2.006;SOR=0.442 GT:AD:DP:GQ:PL 1/1:4,178:183:99:5137,373,0
CP000253.1 1392580 . G T 5109.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.759;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.4474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.03;ReadPosRankSum=2.262;SOR=0.788 GT:AD:DP:GQ:PL 1/1:2,174:176:99:5138,373,0
CP000253.1 1392581 . T G 4782.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.981;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.9738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.97;ReadPosRankSum=1.430;SOR=0.502 GT:AD:DP:GQ:PL 1/1:3,168:172:99:4811,358,0
CP000253.1 1392582 . G A 4845.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.410;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2476;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.34;ReadPosRankSum=-0.453;SOR=0.778 GT:AD:DP:GQ:PL 1/1:2,169:173:99:4874,355,0
CP000253.1 1392612 . G A 4600.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6795;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=28.75;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4629,340,0
CP000253.1 1392613 . T C 4619.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.893;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7854;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=28.87;ReadPosRankSum=1.700;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,159:160:99:4648,343,0
CP000253.1 1392615 . C T 4723.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.891;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6680;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=12.806;QD=28.98;ReadPosRankSum=1.095;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,162:164:99:4752,349,0
CP000253.1 1392624 . T A 5026.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.593;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8687;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.053;QD=27.93;ReadPosRankSum=2.390;SOR=0.145 GT:AD:DP:GQ:PL 1/1:2,178:180:99:5055,373,0
CP000253.1 1392626 . G T 5165.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8687;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=28.70;ReadPosRankSum=1.714;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,179:180:99:5194,379,0
CP000253.1 1392708 . G A 5824.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.690;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.0050;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;MQRankSum=0.000;QD=26.12;ReadPosRankSum=-1.158;SOR=0.253 GT:AD:DP:GQ:PL 1/1:1,222:226:99:5853,430,0
CP000253.1 1392738 . G A 5994.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=41.6046;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=25.95;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,231:235:99:6023,439,0
CP000253.1 1392775 . T C 6528.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.697;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.5098;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;MQRankSum=0.000;QD=26.98;ReadPosRankSum=0.895;SOR=0.453 GT:AD:DP:GQ:PL 1/1:1,241:242:99:6557,482,0
CP000253.1 1392801 . G A 5805.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.688;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.7154;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.24;ReadPosRankSum=-0.588;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,229:231:99:5834,427,0
CP000253.1 1392804 . T C 5726.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.945;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.3618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.23;ReadPosRankSum=-0.429;SOR=0.477 GT:AD:DP:GQ:PL 1/1:3,224:230:99:5755,421,0
CP000253.1 1392855 . T A 6366.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.713;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.99;ReadPosRankSum=0.905;SOR=0.329 GT:AD:DP:GQ:PL 1/1:1,244:248:99:6395,463,0
CP000253.1 1392863 . C T 6579.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6066;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6608,473,0
CP000253.1 1392876 . T A 6301.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.463;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.9729;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.72;ReadPosRankSum=0.185;SOR=0.107 GT:AD:DP:GQ:PL 1/1:2,243:249:99:6330,457,0
CP000253.1 1392966 . A T 6232.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.853;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.87;ReadPosRankSum=0.836;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,231:232:99:6261,451,0
CP000253.1 1392969 . A G 5981.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,231:232:99:6010,439,0
CP000253.1 1392984 . C T 6420.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.7313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6449,461,0
CP000253.1 1392988 . T C 6188.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.522;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9639;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.11;ReadPosRankSum=-0.171;SOR=0.305 GT:AD:DP:GQ:PL 1/1:2,235:240:99:6217,448,0
CP000253.1 1392999 . A T 6421.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.32;ReadPosRankSum=0.114;SOR=0.226 GT:AD:DP:GQ:PL 1/1:1,243:244:99:6450,460,0
CP000253.1 1393053 . A G 5894.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,227:229:99:5923,433,0
CP000253.1 1393059 . A T 6295.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2107;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,237:237:99:6324,457,0
CP000253.1 1393153 . T G 6165.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.989;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.58;ReadPosRankSum=1.068;SOR=0.463 GT:AD:DP:GQ:PL 1/1:1,231:232:99:6194,439,0
CP000253.1 1393167 . T C 5606.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,216:218:99:5635,403,0
CP000253.1 1393329 . C T 6800.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6025;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.31;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6829,491,0
CP000253.1 1393336 . C T 6597.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6626,476,0
CP000253.1 1393350 . G A 6445.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6474,469,0
CP000253.1 1393355 . G A 6361.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6390,466,0
CP000253.1 1393362 . C T 6712.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.07;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6741,482,0
CP000253.1 1393408 . G C 7228.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.8775;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.15;SOR=0.983 GT:AD:DP:GQ:PL 1/1:0,248:250:99:7257,530,0
CP000253.1 1393452 . T C 7283.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=15.685;QD=29.73;ReadPosRankSum=-0.389;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,244:245:99:7312,542,0
CP000253.1 1393455 . C T 7391.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.57;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,250:250:99:7420,542,0
CP000253.1 1393491 . A C 6889.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5633;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.01;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,246:248:99:6918,521,0
CP000253.1 1393493 . C T 7166.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3169;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.25;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,245:247:99:7195,527,0
CP000253.1 1393590 . A C 7036.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.84;SOR=1.260 GT:AD:DP:GQ:PL 1/1:0,244:245:99:7065,521,0
CP000253.1 1393620 . T C 6700.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.686;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.76;ReadPosRankSum=1.675;SOR=1.109 GT:AD:DP:GQ:PL 1/1:2,231:235:99:6729,497,0
CP000253.1 1393689 . T A 6999.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.81;SOR=1.043 GT:AD:DP:GQ:PL 1/1:0,243:244:99:7028,509,0
CP000253.1 1393695 . G A 7051.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=1.025 GT:AD:DP:GQ:PL 1/1:0,248:249:99:7080,512,0
CP000253.1 1393722 . G C 6775.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9558;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.88;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,243:243:99:6804,494,0
CP000253.1 1393737 . A G 6791.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.917;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.30;ReadPosRankSum=-0.282;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,239:240:99:6820,494,0
CP000253.1 1393758 . T A 6665.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1944;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.61;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,233:235:99:6694,485,0
CP000253.1 1393770 . G A 6586.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1486;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.03;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,235:236:99:6615,479,0
CP000253.1 1393794 . G A 6455.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.717;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.24;ReadPosRankSum=-0.865;SOR=0.736 GT:AD:DP:GQ:PL 1/1:2,235:239:99:6484,469,0
CP000253.1 1393854 . T C 6025.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.585;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.32;ReadPosRankSum=0.155;SOR=0.837 GT:AD:DP:GQ:PL 1/1:2,236:240:99:6054,433,0
CP000253.1 1393908 . A C 6026.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5743;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,245:248:99:6055,430,0
CP000253.1 1393995 . T C 5692.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,235:236:99:5721,409,0
CP000253.1 1394043 . G A 5703.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2803;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,227:228:99:5732,409,0
CP000253.1 1394085 . T C 5008.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9166;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.93;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,186:187:99:5037,361,0
CP000253.1 1394133 . A G 4963.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3671;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.73;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,179:180:99:4992,361,0
CP000253.1 1394142 . G A 5132.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0459;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.52;SOR=0.993 GT:AD:DP:GQ:PL 1/1:0,180:181:99:5161,373,0
CP000253.1 1394251 . G A 4301.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4330,304,0
CP000253.1 1394264 . A C 4251.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.870;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5961;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.01;ReadPosRankSum=1.060;SOR=0.356 GT:AD:DP:GQ:PL 1/1:1,169:170:99:4280,304,0
CP000253.1 1394288 . A T 4935.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1890;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,201:202:99:4964,343,0
CP000253.1 1394331 . C T 5530.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.9048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,221:221:99:5559,391,0
CP000253.1 1394334 . T C 5449.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8421;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,219:220:99:5478,388,0
CP000253.1 1394340 . T A 5486.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1707;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,224:225:99:5515,388,0
CP000253.1 1394342 . T C 5552.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.9141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,223:225:99:5581,394,0
CP000253.1 1394355 . G A 5916.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6719;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,236:236:99:5945,418,0
CP000253.1 1394364 . G A 5724.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.944;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=1.257;SOR=0.252 GT:AD:DP:GQ:PL 1/1:1,232:235:99:5753,409,0
CP000253.1 1394572 . G A 6381.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,241:242:99:6410,451,0
CP000253.1 1395147 . C G 6342.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2804;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,241:244:99:6371,460,0
CP000253.1 1395187 . T C 5833.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.464;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.47;ReadPosRankSum=0.429;SOR=0.164 GT:AD:DP:GQ:PL 1/1:2,227:230:99:5862,421,0
CP000253.1 1395440 . T C 6177.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3664;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,236:238:99:6206,445,0
CP000253.1 1395513 . C T 6445.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.5968;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.99;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6474,464,0
CP000253.1 1395537 . C T 6461.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.990;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2290;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=15.812;QD=25.95;ReadPosRankSum=0.682;SOR=0.460 GT:AD:DP:GQ:PL 1/1:1,248:249:99:6490,461,0
CP000253.1 1395555 . C T 6557.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0324;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=26.23;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6586,470,0
CP000253.1 1395573 . C T 5927.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.779;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.7626;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=-0.075;QD=24.91;ReadPosRankSum=-0.945;SOR=0.518 GT:AD:DP:GQ:PL 1/1:3,235:240:99:5956,396,0
CP000253.1 1395613 . G T 5921.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.792;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.52;ReadPosRankSum=0.388;SOR=0.581 GT:AD:DP:GQ:PL 1/1:1,231:233:99:5950,424,0
CP000253.1 1395642 . A C 5658.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,225:226:99:5687,406,0
CP000253.1 1395672 . A C 4994.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0021;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.57;SOR=1.119 GT:AD:DP:GQ:PL 1/1:0,188:188:99:5023,361,0
CP000253.1 1395686 . T C 5095.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.103;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0841;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.85;ReadPosRankSum=1.543;SOR=1.065 GT:AD:DP:GQ:PL 1/1:1,182:184:99:5124,367,0
CP000253.1 1395708 . T A 4639.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.62;SOR=1.213 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4668,337,0
CP000253.1 1395717 . C A 4592.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7818;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.83;SOR=1.138 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4621,334,0
CP000253.1 1395752 . T C 4126.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7335;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.15;SOR=1.091 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4155,301,0
CP000253.1 1395831 . G A 3633.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,136:138:99:3662,268,0
CP000253.1 1395873 . C T 3622.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,145:147:99:3651,259,0
CP000253.1 1395897 . A G 3375.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,135:137:99:3404,244,0
CP000253.1 1395900 . T C 3503.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,137:138:99:3532,256,0
CP000253.1 1395917 . A T 3664.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3693,268,0
CP000253.1 1395924 . G A 3772.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.569;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6803;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.20;ReadPosRankSum=2.177;SOR=0.811 GT:AD:DP:GQ:PL 1/1:2,142:145:99:3801,274,0
CP000253.1 1395951 . T A 3804.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2101;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3833,274,0
CP000253.1 1395954 . T C 3779.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8797;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3808,274,0
CP000253.1 1395957 . C T 3746.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8065;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,145:147:99:3775,268,0
CP000253.1 1395960 . A T 3883.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8065;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,147:148:99:3912,277,0
CP000253.1 1395972 . T A 3709.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.710;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.25;ReadPosRankSum=0.713;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,152:154:99:3738,268,0
CP000253.1 1395975 . G T 4017.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0392;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4046,289,0
CP000253.1 1395980 . A G 4012.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3755;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,152:155:99:4041,289,0
CP000253.1 1395984 . A G 4067.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6759;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,155:156:99:4096,295,0
CP000253.1 1396026 . T G 4254.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.910;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9881;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.88;ReadPosRankSum=1.702;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,170:171:99:4283,304,0
CP000253.1 1396038 . T A 4384.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4413,316,0
CP000253.1 1396043 . T C 4401.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4430,316,0
CP000253.1 1396134 . A T 3708.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5647;MLEAC=2;MLEAF=1.00;MQ=59.81;MQ0=0;QD=27.07;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3737,268,0
CP000253.1 1396212 . A T 3541.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.1182;MLEAC=2;MLEAF=1.00;MQ=59.81;MQ0=0;MQRankSum=0.000;QD=25.85;ReadPosRankSum=-0.468;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,136:138:99:3570,256,0
CP000253.1 1396218 . A G 3560.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.639;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.6503;MLEAC=2;MLEAF=1.00;MQ=59.81;MQ0=0;MQRankSum=11.748;QD=25.99;ReadPosRankSum=-1.024;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,136:140:99:3589,262,0
CP000253.1 1396253 . A T 3845.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1445;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;QD=26.16;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,147:148:99:3874,277,0
CP000253.1 1396266 . C T 3937.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5622;MLEAC=2;MLEAF=1.00;MQ=59.83;MQ0=0;QD=25.74;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3966,283,0
CP000253.1 1396366 . T C 4375.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,172:173:99:4404,313,0
CP000253.1 1396458 . C T 5396.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.59;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,203:203:99:5425,388,0
CP000253.1 1396461 . T C 5413.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,208:208:99:5442,391,0
CP000253.1 1396467 . T C 5464.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.625;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9799;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.66;ReadPosRankSum=-0.066;SOR=0.337 GT:AD:DP:GQ:PL 1/1:2,203:206:99:5493,394,0
CP000253.1 1396485 . T C 4913.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,188:189:99:4942,352,0
CP000253.1 1396491 . A G 4992.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.913 GT:AD:DP:GQ:PL 1/1:0,189:191:99:5021,358,0
CP000253.1 1397025 . A G 5370.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5399,388,0
CP000253.1 1397169 . C T 6612.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.760;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.9280;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.66;ReadPosRankSum=-1.642;SOR=0.345 GT:AD:DP:GQ:PL 1/1:1,247:250:99:6641,482,0
CP000253.1 1397634 . A T 4713.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4742,340,0
CP000253.1 1397700 . C T 4384.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3146;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,169:171:99:4413,319,0
CP000253.1 1397703 . A C 4483.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.788;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5099;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.22;ReadPosRankSum=0.385;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,170:171:99:4512,325,0
CP000253.1 1397760 . A G 4670.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.543;DP=177;Dels=0.00;ExcessHet=3.0103;FS=3.110;HaplotypeScore=7.1666;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.54;ReadPosRankSum=-0.473;SOR=0.315 GT:AD:DP:GQ:PL 1/1:1,175:177:99:4699,309,0
CP000253.1 1397766 . C G 4388.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.26;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4417,316,0
CP000253.1 1397768 . C T 4368.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.14;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4397,316,0
CP000253.1 1397772 . C T 4342.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4072;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.97;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4371,316,0
CP000253.1 1397775 . T G 4306.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.760;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.75;ReadPosRankSum=0.129;SOR=0.343 GT:AD:DP:GQ:PL 1/1:1,160:161:99:4335,313,0
CP000253.1 1397778 . G A 4307.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.92;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,160:161:99:4336,316,0
CP000253.1 1397781 . T A 4407.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.865;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7895;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.88;ReadPosRankSum=-1.299;SOR=0.321 GT:AD:DP:GQ:PL 1/1:1,163:164:99:4436,319,0
CP000253.1 1397787 . C T 4536.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3902;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.17;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,167:168:99:4565,325,0
CP000253.1 1397817 . G A 4144.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7361;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,157:158:99:4173,304,0
CP000253.1 1397835 . A C 4055.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.675;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.34;ReadPosRankSum=0.500;SOR=0.046 GT:AD:DP:GQ:PL 1/1:4,150:156:99:4084,298,0
CP000253.1 1397860 . G A 3854.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4061;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,148:150:99:3883,277,0
CP000253.1 1397870 . C T 3546.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.879;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3470;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.67;ReadPosRankSum=-1.641;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,132:133:99:3575,256,0
CP000253.1 1397875 . G T 3354.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9744;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3383,241,0
CP000253.1 1397877 . T A 3296.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3325,241,0
CP000253.1 1397878 . G T 3304.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3333,238,0
CP000253.1 1397883 . A T 3434.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7473;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3463,247,0
CP000253.1 1397904 . A G 3749.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.305;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8134;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.058;QD=24.83;ReadPosRankSum=0.749;SOR=0.706 GT:AD:DP:GQ:PL 1/1:2,149:151:99:3778,237,0
CP000253.1 1397916 . G A 4061.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5114;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.20;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:156:99:4090,292,0
CP000253.1 1397934 . C T 3660.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6686;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=27.12;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3689,265,0
CP000253.1 1397940 . G A 3482.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3511,256,0
CP000253.1 1397943 . A T 3359.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3381;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3388,244,0
CP000253.1 1397967 . A G 3319.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1766;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.99;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,123:124:99:3348,241,0
CP000253.1 1397973 . G A 3416.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7668;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.78;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3445,247,0
CP000253.1 1397982 . T A 3089.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.35;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3118,226,0
CP000253.1 1397985 . G A 2980.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.39;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:106:99:3009,220,0
CP000253.1 1397991 . G A 2942.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2971,214,0
CP000253.1 1397997 . T A 2994.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.74;ReadPosRankSum=1.640;SOR=0.309 GT:AD:DP:GQ:PL 1/1:1,111:113:99:3023,220,0
CP000253.1 1398003 . C G 2820.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,106:111:99:2849,205,0
CP000253.1 1398015 . T C 3068.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8161;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=26.68;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3097,226,0
CP000253.1 1398018 . T A 2998.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7447;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=27.02;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,111:112:99:3027,220,0
CP000253.1 1398057 . C G 3222.65 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.724;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3426;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;MQRankSum=0.000;QD=26.20;ReadPosRankSum=-1.394;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,122:124:99:3251,235,0
CP000253.1 1398078 . C A 3221.92 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.780;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4243;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;MQRankSum=0.000;QD=26.63;ReadPosRankSum=-1.561;SOR=0.329 GT:AD:DP:GQ:PL 1/1:1,120:123:99:3250,235,0
CP000253.1 1398120 . A T 3620.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7118;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=27.02;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3649,265,0
CP000253.1 1398129 . G A 3500.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6297;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=26.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3529,259,0
CP000253.1 1398141 . G A 3485.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9691;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=26.21;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3514,256,0
CP000253.1 1398153 . G A 3388.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3465;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=27.11;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3417,247,0
CP000253.1 1398164 . T G 2886.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.776;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5039;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.150;QD=27.76;ReadPosRankSum=1.717;SOR=0.286 GT:AD:DP:GQ:PL 1/1:4,100:104:99:2915,195,0
CP000253.1 1398165 . A T 2820.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.728;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0075;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=27.65;ReadPosRankSum=-0.034;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,101:102:99:2849,179,0
CP000253.1 1398168 . C A 2901.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2626;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=29.02;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2930,211,0
CP000253.1 1398169 . A G 2884.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0853;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=28.85;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2913,211,0
CP000253.1 1398170 . C T 2833.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1906;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=28.06;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2862,211,0
CP000253.1 1398174 . C T 2904.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1015;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=28.76;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2933,214,0
CP000253.1 1398186 . A T 3661.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6988;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=29.29;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3690,268,0
CP000253.1 1398191 . A C 3475.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1224;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.94;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3504,259,0
CP000253.1 1398201 . G A 3812.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8302;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=28.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3841,277,0
CP000253.1 1398204 . A G 3859.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6217;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=28.17;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,137:138:99:3888,283,0
CP000253.1 1398213 . T C 3827.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2934;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=27.15;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3856,277,0
CP000253.1 1398261 . A T 3990.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.712;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1203;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=25.75;ReadPosRankSum=1.734;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,154:156:99:4019,292,0
CP000253.1 1398263 . T A 3951.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0717;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.33;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3980,289,0
CP000253.1 1398267 . A G 3961.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2746;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.07;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,158:159:99:3990,292,0
CP000253.1 1398318 . T A 3884.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.682;DP=155;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.7478;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=25.73;ReadPosRankSum=-1.595;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,150:154:99:3913,289,0
CP000253.1 1398324 . C T 3907.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.097;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.6525;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=-0.057;QD=25.21;ReadPosRankSum=-1.602;SOR=0.113 GT:AD:DP:GQ:PL 1/1:2,153:155:99:3936,256,0
CP000253.1 1398330 . C T 4217.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5657;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=26.69;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,158:159:99:4246,307,0
CP000253.1 1398366 . A G 4102.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0783;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:156:99:4131,295,0
CP000253.1 1398369 . A C 3935.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.858;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1568;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.39;ReadPosRankSum=-0.682;SOR=0.234 GT:AD:DP:GQ:PL 1/1:1,154:155:99:3964,283,0
CP000253.1 1398375 . A T 4173.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.878;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.25;ReadPosRankSum=-0.970;SOR=0.233 GT:AD:DP:GQ:PL 1/1:1,158:159:99:4202,301,0
CP000253.1 1398435 . C A 3768.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.756;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=1.350;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,153:155:99:3797,274,0
CP000253.1 1398447 . T C 3868.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3897,280,0
CP000253.1 1398483 . A T 3881.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.73;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,140:142:99:3910,283,0
CP000253.1 1398486 . G A 3873.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3902,283,0
CP000253.1 1398495 . T C 3024.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5833;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:118:99:3053,220,0
CP000253.1 1398498 . G A 3073.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4260;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.50;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,116:117:99:3102,226,0
CP000253.1 1398501 . T A 3183.76 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0648;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3212,235,0
CP000253.1 1398525 . G A 2069.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2098,153,0
CP000253.1 1398527 . T C 2019.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3910;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.93;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:76:99:2048,150,0
CP000253.1 1398528 . C A 2143.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.883;DP=77;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3910;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.21;ReadPosRankSum=0.821;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,75:76:99:2172,160,0
CP000253.1 1398531 . C A 2094.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.479;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.20;ReadPosRankSum=0.090;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,76:77:99:2123,126,0
CP000253.1 1398534 . A G 2120.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4952;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.28;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:76:99:2149,157,0
CP000253.1 1398536 . C T 2188.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3954;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.80;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2217,160,0
CP000253.1 1398537 . C T 2140.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.674;DP=77;Dels=0.00;ExcessHet=3.0103;FS=3.067;HaplotypeScore=15.1896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.80;ReadPosRankSum=1.170;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,76:77:99:2169,131,0
CP000253.1 1398540 . T A 2110.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.439;DP=77;Dels=0.00;ExcessHet=3.0103;FS=3.067;HaplotypeScore=12.2650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.41;ReadPosRankSum=1.193;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,76:77:99:2139,129,0
CP000253.1 1398545 . T G 2059.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.851;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.75;ReadPosRankSum=1.193;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,76:77:99:2088,153,0
CP000253.1 1398546 . A T 2171.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.20;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2200,160,0
CP000253.1 1398585 . T A 3756.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.83;ReadPosRankSum=1.657;SOR=0.292 GT:AD:DP:GQ:PL 1/1:1,139:140:99:3785,274,0
CP000253.1 1398643 . T C 3775.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4171;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,145:146:99:3804,274,0
CP000253.1 1398672 . A T 3734.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.881;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.94;ReadPosRankSum=-0.404;SOR=0.473 GT:AD:DP:GQ:PL 1/1:1,143:144:99:3763,268,0
CP000253.1 1398678 . A G 3689.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.780;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0072;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.17;ReadPosRankSum=-0.436;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,140:146:99:3718,271,0
CP000253.1 1398720 . A G 3790.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.860;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.79;ReadPosRankSum=-1.344;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,146:147:99:3819,242,0
CP000253.1 1398741 . G A 3712.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3741,271,0
CP000253.1 1398755 . T G 3831.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.923 GT:AD:DP:GQ:PL 1/1:0,152:153:99:3860,274,0
CP000253.1 1398762 . G A 3887.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,151:152:99:3916,280,0
CP000253.1 1398765 . T A 3493.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,140:144:99:3522,250,0
CP000253.1 1398834 . C T 3300.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3329,241,0
CP000253.1 1398840 . T A 3136.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=1.159 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3165,226,0
CP000253.1 1398843 . T A 3087.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8386;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.09;SOR=1.149 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3116,223,0
CP000253.1 1398845 . T A 2991.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7327;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=1.149 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3020,217,0
CP000253.1 1398846 . T A 3118.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.89;SOR=1.140 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3147,226,0
CP000253.1 1398852 . G A 3435.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3464,247,0
CP000253.1 1399008 . G A 2547.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9960;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.10;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,94:97:99:2576,184,0
CP000253.1 1399152 . A T 1148.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:84:1177,84,0
CP000253.1 1399194 . T A 1284.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:93:1313,93,0
CP000253.1 1399212 . T A 1929.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2438;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1958,138,0
CP000253.1 1399230 . A C 2602.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=1.072 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2631,187,0
CP000253.1 1399233 . A T 2709.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2738,193,0
CP000253.1 1399239 . G A 2977.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3006,211,0
CP000253.1 1399281 . G A 3913.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5623;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.951 GT:AD:DP:GQ:PL 1/1:0,163:163:99:3942,277,0
CP000253.1 1399485 . A T 5260.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.901;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2827;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;MQRankSum=0.000;QD=24.02;ReadPosRankSum=-0.087;SOR=0.463 GT:AD:DP:GQ:PL 1/1:1,218:219:99:5289,370,0
CP000253.1 1399548 . A C 4969.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9861;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=25.23;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,197:197:99:4998,352,0
CP000253.1 1399559 . C G 4872.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4011;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=24.73;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,197:197:99:4901,349,0
CP000253.1 1399564 . T G 4704.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.693;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2020;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;MQRankSum=0.000;QD=24.13;ReadPosRankSum=-1.395;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,194:195:99:4733,315,0
CP000253.1 1399595 . A C 5195.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,205:205:99:5224,367,0
CP000253.1 1399718 . A G 6292.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.700;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.3750;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.68;ReadPosRankSum=2.160;SOR=0.268 GT:AD:DP:GQ:PL 1/1:2,243:248:99:6321,451,0
CP000253.1 1399794 . C T 6473.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.55;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,235:235:99:6502,467,0
CP000253.1 1399797 . A G 6355.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.16;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,234:234:99:6384,460,0
CP000253.1 1399804 . C G 6558.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.03;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,234:234:99:6587,476,0
CP000253.1 1399812 . A G 6261.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9465;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.46;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,228:228:99:6290,454,0
CP000253.1 1399813 . C T 6061.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=205.1220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.55;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,220:222:99:6090,445,0
CP000253.1 1399833 . A T 5489.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=4.425;DP=200;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1165.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.87;ReadPosRankSum=-0.625;SOR=0.350 GT:AD:DP:GQ:PL 1/1:4,193:197:99:5518,375,0
CP000253.1 1399911 . C A 6732.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6761,485,0
CP000253.1 1399983 . C T 6817.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.60;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,247:250:99:6846,491,0
CP000253.1 1400001 . G A 6688.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6745;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.46;ReadPosRankSum=-0.361;SOR=0.310 GT:AD:DP:GQ:PL 1/1:1,234:236:99:6717,488,0
CP000253.1 1400004 . G A 6345.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0524;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.59;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,230:232:99:6374,466,0
CP000253.1 1400038 . T C 6858.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.935;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2697;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.44;ReadPosRankSum=1.698;SOR=0.638 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6887,500,0
CP000253.1 1400133 . A C 6094.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.09;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,225:227:99:6123,439,0
CP000253.1 1400166 . A C 5978.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.929;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.4230;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.57;ReadPosRankSum=0.978;SOR=0.452 GT:AD:DP:GQ:PL 1/1:1,224:225:99:6007,427,0
CP000253.1 1400346 . T C 3220.76 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7872;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3249,232,0
CP000253.1 1400538 . C T 4759.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2354;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,195:196:99:4788,334,0
CP000253.1 1400540 . C T 4660.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.947 GT:AD:DP:GQ:PL 1/1:0,192:192:99:4689,328,0
CP000253.1 1400613 . C T 4442.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8002;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,186:188:99:4471,313,0
CP000253.1 1400620 . A T 4496.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5678;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4525,316,0
CP000253.1 1400625 . A T 4157.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.851;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8033;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.76;ReadPosRankSum=0.693;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,174:175:99:4186,292,0
CP000253.1 1400634 . G A 4173.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4202,298,0
CP000253.1 1400637 . A T 4092.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.017;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.66;ReadPosRankSum=1.733;SOR=0.259 GT:AD:DP:GQ:PL 1/1:1,165:166:99:4121,289,0
CP000253.1 1400651 . A C 4036.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4791;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4065,289,0
CP000253.1 1400670 . G A 4100.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9569;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,163:165:99:4129,289,0
CP000253.1 1400676 . T A 3970.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,159:160:99:3999,283,0
CP000253.1 1400697 . T A 3944.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3973,280,0
CP000253.1 1400700 . T C 3831.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2669;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.56;ReadPosRankSum=0.889;SOR=0.327 GT:AD:DP:GQ:PL 1/1:1,155:156:99:3860,280,0
CP000253.1 1400708 . A G 3907.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.796;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5055;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.89;ReadPosRankSum=-0.629;SOR=0.333 GT:AD:DP:GQ:PL 1/1:1,156:157:99:3936,283,0
CP000253.1 1400712 . T C 3712.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,147:148:99:3741,268,0
CP000253.1 1400727 . C A 3607.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3636,256,0
CP000253.1 1400730 . C T 3620.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3649,256,0
CP000253.1 1400739 . A T 3557.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0142;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3586,253,0
CP000253.1 1400742 . A G 3367.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3396,241,0
CP000253.1 1400787 . A G 2839.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,117:118:99:2868,205,0
CP000253.1 1400901 . T A 1586.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.350;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.68;ReadPosRankSum=-1.992;SOR=0.854 GT:AD:DP:GQ:PL 1/1:2,65:67:79:1615,79,0
CP000253.1 1401036 . T A 1458.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.78;MQ0=0;QD=23.16;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1487,105,0
CP000253.1 1401066 . A G 1605.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.461;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2127;MLEAC=2;MLEAF=1.00;MQ=59.79;MQ0=0;MQRankSum=8.247;QD=23.97;ReadPosRankSum=-0.543;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,66:67:83:1634,83,0
CP000253.1 1401084 . T C 1517.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.976;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.78;MQ0=0;MQRankSum=7.938;QD=24.48;ReadPosRankSum=-0.839;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,61:62:99:1546,108,0
CP000253.1 1401093 . T G 1407.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1436;MLEAC=2;MLEAF=1.00;MQ=59.76;MQ0=0;QD=24.70;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:58:99:1436,102,0
CP000253.1 1401111 . T A 1279.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.153;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3064;MLEAC=2;MLEAF=1.00;MQ=59.74;MQ0=0;MQRankSum=7.417;QD=23.70;ReadPosRankSum=-1.317;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,53:54:62:1308,62,0
CP000253.1 1401126 . G A 1030.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.076;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9879;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;MQRankSum=6.710;QD=23.43;ReadPosRankSum=-1.656;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,43:44:43:1059,43,0
CP000253.1 1401128 . T C 1009.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.523;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8200;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;MQRankSum=6.710;QD=22.95;ReadPosRankSum=-1.656;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,43:44:41:1038,41,0
CP000253.1 1401135 . C T 1088.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.931;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.9965;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;MQRankSum=6.710;QD=24.74;ReadPosRankSum=-1.498;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,43:44:53:1117,53,0
CP000253.1 1401150 . G A 1051.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.631;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;MQRankSum=6.635;QD=24.46;ReadPosRankSum=-1.251;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,42:43:78:1080,78,0
CP000253.1 1401157 . C G 1002.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:75:1031,75,0
CP000253.1 1401159 . A G 1050.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:78:1079,78,0
CP000253.1 1401171 . C T 1013.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8334;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.40;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:75:1042,75,0
CP000253.1 1401179 . T A 959.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:72:988,72,0
CP000253.1 1401184 . G A 972.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.02;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:72:1001,72,0
CP000253.1 1401185 . T C 1009.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.29;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:75:1038,75,0
CP000253.1 1401192 . G A 1167.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.48;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,41:41:87:1196,87,0
CP000253.1 1401204 . G A 1199.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:90:1228,90,0
CP000253.1 1401210 . G A 1124.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:84:1153,84,0
CP000253.1 1401277 . C T 969.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:39:72:998,72,0
CP000253.1 1401287 . G C 924.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:69:953,69,0
CP000253.1 1401331 . C T 1410.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1991;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,55:57:99:1439,102,0
CP000253.1 1401382 . A G 1790.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1819,129,0
CP000253.1 1401390 . G A 1898.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1927,135,0
CP000253.1 1401398 . G A 1812.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1841,129,0
CP000253.1 1401447 . C T 2156.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3700;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2185,154,0
CP000253.1 1401477 . A G 2206.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7558;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,87:89:99:2235,160,0
CP000253.1 1401675 . A C 3872.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9560;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,159:160:99:3901,274,0
CP000253.1 1401729 . C T 4181.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4637;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4210,292,0
CP000253.1 1401769 . C G 3773.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3802,265,0
CP000253.1 1401770 . T A 3592.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7872;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3621,253,0
CP000253.1 1401771 . C G 3598.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.882;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7872;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.15;ReadPosRankSum=-0.675;SOR=0.487 GT:AD:DP:GQ:PL 1/1:1,148:150:99:3627,253,0
CP000253.1 1401788 . A C 3633.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.989;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2372;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.23;ReadPosRankSum=0.185;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,149:151:99:3662,256,0
CP000253.1 1401798 . A G 3233.06 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3263,229,0
CP000253.1 1401801 . A T 3185.74 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3070;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3214,226,0
CP000253.1 1401804 . C G 3251.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3280,229,0
CP000253.1 1401807 . A G 3230.05 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3259,229,0
CP000253.1 1401810 . C G 3176.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9778;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3205,226,0
CP000253.1 1401812 . C A 3243.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.654;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1138;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=0.842;SOR=0.560 GT:AD:DP:GQ:PL 1/1:2,128:131:99:3272,229,0
CP000253.1 1401816 . T A 3233.06 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0353;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3261,226,0
CP000253.1 1401838 . T C 3204.83 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.052;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4428;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.84;ReadPosRankSum=-0.940;SOR=0.637 GT:AD:DP:GQ:PL 1/1:1,128:130:99:3233,229,0
CP000253.1 1401840 . C T 3209.76 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2750;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3238,226,0
CP000253.1 1401846 . T A 3118.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.035;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.75;ReadPosRankSum=-0.770;SOR=0.564 GT:AD:DP:GQ:PL 1/1:1,125:126:99:3147,220,0
CP000253.1 1401849 . C A 3311.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.042;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.09;ReadPosRankSum=0.840;SOR=0.548 GT:AD:DP:GQ:PL 1/1:1,131:132:99:3340,232,0
CP000253.1 1401891 . A T 2737.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2766,196,0
CP000253.1 1402332 . G A 3574.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.726;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0016;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.63;ReadPosRankSum=0.319;SOR=0.800 GT:AD:DP:GQ:PL 1/1:2,156:158:99:3603,208,0
CP000253.1 1402365 . T A 3384.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.817;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0671;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.87;ReadPosRankSum=-1.238;SOR=0.838 GT:AD:DP:GQ:PL 1/1:2,146:148:99:3413,200,0
CP000253.1 1402389 . G A 3050.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.688;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.65;ReadPosRankSum=-1.917;SOR=0.916 GT:AD:DP:GQ:PL 1/1:2,127:129:99:3079,175,0
CP000253.1 1402407 . A G 2717.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.980;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.84;ReadPosRankSum=-1.760;SOR=1.015 GT:AD:DP:GQ:PL 1/1:2,112:114:99:2746,157,0
CP000253.1 1402410 . G A 2618.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.25;ReadPosRankSum=-1.733;SOR=1.036 GT:AD:DP:GQ:PL 1/1:2,106:108:99:2647,153,0
CP000253.1 1402419 . G A 2625.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.473;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.54;ReadPosRankSum=-1.784;SOR=1.064 GT:AD:DP:GQ:PL 1/1:2,105:107:99:2654,153,0
CP000253.1 1402430 . G T 2200.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.507;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.41;ReadPosRankSum=-1.547;SOR=0.929 GT:AD:DP:GQ:PL 1/1:2,92:94:99:2229,118,0
CP000253.1 1402741 . G C 978.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1007,72,0
CP000253.1 1402850 . G C 1099.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:81:1128,81,0
CP000253.1 1402854 . G A 1150.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.07;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:84:1179,84,0
CP000253.1 1402855 . G A 1154.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.17;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:84:1183,84,0
CP000253.1 1402857 . T G 1110.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.09;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:84:1139,84,0
CP000253.1 1402860 . A C 1013.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.551;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.0888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.58;ReadPosRankSum=2.397;SOR=0.535 GT:AD:DP:GQ:PL 1/1:2,41:43:75:1042,75,0
CP000253.1 1402875 . A G 1360.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1389,99,0
CP000253.1 1402891 . T G 1360.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2649;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.22;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1389,99,0
CP000253.1 1402893 . C T 1320.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.95;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:50:96:1349,96,0
CP000253.1 1402895 . A G 1248.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=0.521;SOR=0.549 GT:AD:DP:GQ:PL 1/1:1,49:50:93:1277,93,0
CP000253.1 1402896 . A G 1291.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:50:96:1320,96,0
CP000253.1 1402902 . T A 1521.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1550,111,0
CP000253.1 1403172 . G A 4038.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4067,283,0
CP000253.1 1403319 . A T 4300.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4329,304,0
CP000253.1 1403393 . T C 4007.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5509;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4036,283,0
CP000253.1 1403410 . T C 3904.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5065;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3933,280,0
CP000253.1 1403411 . C T 3945.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3974,283,0
CP000253.1 1403462 . G C 4414.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6538;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,176:177:99:4443,316,0
CP000253.1 1403616 . A G 4962.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.846;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7349;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.86;ReadPosRankSum=-0.800;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,207:208:99:4991,346,0
CP000253.1 1403619 . G A 4900.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.505;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5135;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.45;ReadPosRankSum=-0.112;SOR=0.762 GT:AD:DP:GQ:PL 1/1:2,207:209:99:4929,346,0
CP000253.1 1403673 . C G 4467.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9080;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,185:186:99:4496,316,0
CP000253.1 1403676 . G A 4496.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4525,316,0
CP000253.1 1403799 . A T 3455.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3484,247,0
CP000253.1 1403808 . G T 2977.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.512;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1659;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.81;ReadPosRankSum=2.133;SOR=0.127 GT:AD:DP:GQ:PL 1/1:2,118:120:99:3006,214,0
CP000253.1 1403811 . C T 2942.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.783;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=-0.241;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,114:115:99:2971,211,0
CP000253.1 1403892 . T A 3042.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,115:116:99:3071,220,0
CP000253.1 1403901 . C A 2981.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0968;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,115:117:99:3010,217,0
CP000253.1 1403919 . A G 3155.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8786;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=1.004 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3184,226,0
CP000253.1 1403925 . A T 3213.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4493;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,121:123:99:3242,232,0
CP000253.1 1403928 . T A 3119.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.898;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=1.520;SOR=0.690 GT:AD:DP:GQ:PL 1/1:1,121:122:99:3148,226,0
CP000253.1 1403937 . C T 3131.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2676;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3160,226,0
CP000253.1 1404018 . T A 3149.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8424;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3178,229,0
CP000253.1 1404042 . C A 3134.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.997;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.49;ReadPosRankSum=-1.043;SOR=0.351 GT:AD:DP:GQ:PL 1/1:1,122:124:99:3163,198,0
CP000253.1 1404054 . A G 3347.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0337;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=1.152 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3376,244,0
CP000253.1 1404144 . C T 4582.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7664;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=26.49;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,173:175:99:4611,328,0
CP000253.1 1404299 . G C 5430.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,218:219:99:5459,385,0
CP000253.1 1404410 . C T 5451.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,210:210:99:5480,388,0
CP000253.1 1404430 . A T 5932.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,235:237:99:5961,427,0
CP000253.1 1404459 . A G 5189.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.643;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6912;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.48;ReadPosRankSum=-0.311;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,211:213:99:5218,376,0
CP000253.1 1404473 . C T 5022.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=183.5355;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,194:200:99:5051,355,0
CP000253.1 1404772 . G A 1086.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=1.312 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1115,78,0
CP000253.1 1405168 . A G 1074.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:78:1103,78,0
CP000253.1 1405195 . T A 1142.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1171,81,0
CP000253.1 1405231 . T A 1329.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:96:1358,96,0
CP000253.1 1405303 . G T 1309.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.752;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2105;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.20;ReadPosRankSum=-0.793;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,58:59:95:1338,95,0
CP000253.1 1405363 . C T 1269.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1298,90,0
CP000253.1 1405414 . G C 1924.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0814;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,86:87:99:1953,135,0
CP000253.1 1405588 . A G 1993.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2022,138,0
CP000253.1 1405639 . T C 1404.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5098;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1433,99,0
CP000253.1 1405681 . G A 1201.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:84:1230,84,0
CP000253.1 1405774 . A T 515.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:39:544,39,0
CP000253.1 1405786 . A G 388.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.77;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:30:417,30,0
CP000253.1 1405945 . T C 583.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:612,42,0
CP000253.1 1405999 . C T 600.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:629,45,0
CP000253.1 1406215 . T C 446.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:19:33:475,33,0
CP000253.1 1406290 . T A 1560.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5238;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1589,108,0
CP000253.1 1406427 . G A 1320.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1349,93,0
CP000253.1 1406551 . C G 520.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:39:549,39,0
CP000253.1 1406665 . T C 381.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1446;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:410,30,0
CP000253.1 1406749 . T C 714.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2112;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=23.83;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:31:51:743,51,0
CP000253.1 1406815 . T A 1065.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1481;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=23.17;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:75:1094,75,0
CP000253.1 1406818 . T C 1078.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1418;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;MQRankSum=7.143;QD=21.58;ReadPosRankSum=-1.527;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,49:50:75:1107,75,0
CP000253.1 1406854 . C A 1132.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=23.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1161,81,0
CP000253.1 1406902 . A G 1550.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.652;DP=68;Dels=0.00;ExcessHet=3.0103;FS=3.411;HaplotypeScore=11.2234;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=8.308;QD=22.81;ReadPosRankSum=-0.563;SOR=0.561 GT:AD:DP:GQ:PL 1/1:1,67:68:77:1579,77,0
CP000253.1 1406908 . A T 1686.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.923;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4406;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=8.545;QD=23.43;ReadPosRankSum=-0.531;SOR=0.542 GT:AD:DP:GQ:PL 1/1:1,71:72:99:1715,117,0
CP000253.1 1407010 . A G 1863.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1892,129,0
CP000253.1 1407124 . C T 1324.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1353,93,0
CP000253.1 1407178 . A G 1901.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.911;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1211;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=23.48;ReadPosRankSum=-0.150;SOR=0.302 GT:AD:DP:GQ:PL 1/1:1,80:82:99:1930,135,0
CP000253.1 1407214 . G A 2061.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3137;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2090,144,0
CP000253.1 1407388 . G A 1831.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0467;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:83:99:1860,132,0
CP000253.1 1407990 . A G 1748.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.760;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.34;ReadPosRankSum=-1.535;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,68:69:99:1777,126,0
CP000253.1 1407991 . A G 1703.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1732,123,0
CP000253.1 1407993 . T A 1756.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1785,129,0
CP000253.1 1408015 . G A 2173.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6440;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=26.84;SOR=1.124 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2202,157,0
CP000253.1 1408024 . T C 1957.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.771;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2823;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=0.000;QD=26.46;ReadPosRankSum=-0.938;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,73:74:99:1986,144,0
CP000253.1 1408027 . A G 1877.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.885;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1539;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=0.000;QD=25.72;ReadPosRankSum=-1.522;SOR=0.430 GT:AD:DP:GQ:PL 1/1:1,72:74:99:1906,138,0
CP000253.1 1408033 . C T 1919.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0767;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=26.30;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1948,138,0
CP000253.1 1408035 . G A 2021.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1826;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=28.08;SOR=1.226 GT:AD:DP:GQ:PL 1/1:0,72:73:99:2050,147,0
CP000253.1 1408036 . T G 1969.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.462;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1826;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=0.000;QD=26.98;ReadPosRankSum=-1.664;SOR=0.430 GT:AD:DP:GQ:PL 1/1:1,72:73:99:1998,140,0
CP000253.1 1408054 . T A 2438.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.875;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=25.94;ReadPosRankSum=1.185;SOR=0.838 GT:AD:DP:GQ:PL 1/1:1,93:94:99:2467,181,0
CP000253.1 1408075 . A G 2471.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0390;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2500,178,0
CP000253.1 1408078 . C T 2317.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0323;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2346,166,0
CP000253.1 1408081 . G T 2484.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1382;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2513,178,0
CP000253.1 1408099 . A G 2467.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4368;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2496,178,0
CP000253.1 1408109 . T C 2283.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=-1.110;SOR=0.281 GT:AD:DP:GQ:PL 1/1:1,90:91:99:2312,163,0
CP000253.1 1408111 . T C 2185.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.663;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4801;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.02;ReadPosRankSum=-1.071;SOR=0.281 GT:AD:DP:GQ:PL 1/1:1,90:91:99:2214,159,0
CP000253.1 1408114 . A T 2255.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2284,163,0
CP000253.1 1408123 . A T 2241.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.903;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3180;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.63;ReadPosRankSum=-0.765;SOR=0.281 GT:AD:DP:GQ:PL 1/1:1,90:91:99:2270,160,0
CP000253.1 1408126 . G A 2175.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.858;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2731;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.18;ReadPosRankSum=-0.753;SOR=0.271 GT:AD:DP:GQ:PL 1/1:1,89:91:99:2204,154,0
CP000253.1 1408128 . T C 2240.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.602;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4849;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.62;ReadPosRankSum=-0.763;SOR=0.281 GT:AD:DP:GQ:PL 1/1:1,90:91:99:2269,162,0
CP000253.1 1408129 . T A 2169.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.062;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4849;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.11;ReadPosRankSum=-0.752;SOR=0.293 GT:AD:DP:GQ:PL 1/1:1,89:91:99:2198,152,0
CP000253.1 1408135 . T C 2347.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7248;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2376,166,0
CP000253.1 1408147 . T A 2323.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2352,163,0
CP000253.1 1408150 . A T 2301.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5428;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2330,163,0
CP000253.1 1408156 . T A 2299.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2328,163,0
CP000253.1 1408162 . T A 2241.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.879;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.60;ReadPosRankSum=1.662;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2270,160,0
CP000253.1 1408165 . G T 2231.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2260,157,0
CP000253.1 1408177 . A T 2200.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2229,156,0
CP000253.1 1408183 . A G 2172.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.927;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.11;ReadPosRankSum=1.660;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,93:94:99:2201,151,0
CP000253.1 1408195 . C T 2123.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2152,147,0
CP000253.1 1408209 . T G 1964.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1993,138,0
CP000253.1 1408213 . A T 1962.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7351;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:81:99:1991,138,0
CP000253.1 1408222 . A T 1926.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3994;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1955,135,0
CP000253.1 1408228 . T C 1774.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1803,126,0
CP000253.1 1408234 . A T 1611.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1640,114,0
CP000253.1 1408236 . T A 1594.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1623,114,0
CP000253.1 1408237 . A T 1599.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1628,114,0
CP000253.1 1408267 . A T 1968.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1997,141,0
CP000253.1 1408276 . A G 1904.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,77:78:99:1933,138,0
CP000253.1 1408284 . G T 1913.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1942,135,0
CP000253.1 1408291 . A T 1989.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2018,141,0
CP000253.1 1408294 . A T 1992.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2021,141,0
CP000253.1 1408318 . T A 1915.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.37;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1944,138,0
CP000253.1 1408330 . C T 1707.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.11;SOR=1.366 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1736,123,0
CP000253.1 1408331 . A T 1763.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.00;SOR=1.366 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1792,129,0
CP000253.1 1408333 . T A 1811.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.76;SOR=1.366 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1840,132,0
CP000253.1 1408349 . T G 1951.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.88;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1980,141,0
CP000253.1 1408363 . A T 1840.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.07;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1869,132,0
CP000253.1 1408369 . A T 1748.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1777,126,0
CP000253.1 1408375 . A G 1808.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7217;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1837,129,0
CP000253.1 1408381 . A C 1762.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1791,126,0
CP000253.1 1408387 . C T 1850.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.82;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1879,132,0
CP000253.1 1408392 . A C 1849.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6562;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1878,132,0
CP000253.1 1408399 . A G 1786.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1815,129,0
CP000253.1 1408405 . A T 1810.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1839,132,0
CP000253.1 1408417 . A T 1633.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1662,117,0
CP000253.1 1408423 . A G 1654.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1683,117,0
CP000253.1 1408435 . T A 1570.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.798;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.54;ReadPosRankSum=-0.488;SOR=0.374 GT:AD:DP:GQ:PL 1/1:1,63:64:99:1599,114,0
CP000253.1 1408458 . A G 1061.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1090,78,0
CP000253.1 1408459 . T G 1071.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1100,78,0
CP000253.1 1408462 . T A 1091.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1120,78,0
CP000253.1 1408465 . A T 1085.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1114,78,0
CP000253.1 1408468 . G A 1095.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1124,78,0
CP000253.1 1408477 . T A 1214.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1243,87,0
CP000253.1 1408480 . G A 1181.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1210,87,0
CP000253.1 1408486 . T C 1315.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:54:93:1344,93,0
CP000253.1 1408492 . C A 1344.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1373,96,0
CP000253.1 1408501 . A T 1436.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1465,102,0
CP000253.1 1408522 . A T 1418.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5612;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1447,102,0
CP000253.1 1408525 . A T 1351.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.878;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5612;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.14;ReadPosRankSum=1.610;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,55:56:96:1380,96,0
CP000253.1 1408537 . G A 1322.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1351,93,0
CP000253.1 1408540 . T A 1331.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1360,93,0
CP000253.1 1408546 . T G 1444.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7351;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1473,102,0
CP000253.1 1408558 . G A 1538.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6289;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1567,108,0
CP000253.1 1408573 . G A 1578.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1607,111,0
CP000253.1 1408582 . G A 1516.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3416;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1545,105,0
CP000253.1 1408624 . G A 1606.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1635,111,0
CP000253.1 1408648 . A G 1546.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1575,108,0
CP000253.1 1408651 . C T 1543.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1572,108,0
CP000253.1 1408657 . C A 1544.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1573,108,0
CP000253.1 1408663 . G T 1479.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1508,105,0
CP000253.1 1408669 . T G 1320.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1349,93,0
CP000253.1 1408672 . T A 1279.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1308,90,0
CP000253.1 1408675 . T A 1251.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.886;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.62;ReadPosRankSum=1.702;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,52:53:90:1280,90,0
CP000253.1 1408677 . G T 1267.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1296,90,0
CP000253.1 1408678 . T C 1277.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1306,90,0
CP000253.1 1408684 . C A 1235.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:53:87:1264,87,0
CP000253.1 1408687 . T A 1275.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1304,90,0
CP000253.1 1408688 . T A 1283.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1312,90,0
CP000253.1 1408689 . G T 1278.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1307,90,0
CP000253.1 1408702 . A T 1755.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1784,123,0
CP000253.1 1408708 . T C 1762.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1791,123,0
CP000253.1 1408726 . G A 1759.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1788,123,0
CP000253.1 1408734 . A G 1745.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1774,123,0
CP000253.1 1408738 . A T 1528.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1557,108,0
CP000253.1 1408744 . T C 1491.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1520,105,0
CP000253.1 1408750 . A T 1528.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1557,108,0
CP000253.1 1408765 . G A 1043.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1072,75,0
CP000253.1 1408768 . C T 1052.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1081,75,0
CP000253.1 1408771 . A G 1054.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1083,75,0
CP000253.1 1408774 . A T 1056.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1085,75,0
CP000253.1 1408780 . T G 1045.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1074,75,0
CP000253.1 1408781 . G C 1049.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1078,75,0
CP000253.1 1408783 . G A 1043.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1072,75,0
CP000253.1 1408789 . G A 1105.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1134,78,0
CP000253.1 1408795 . T A 1103.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1132,78,0
CP000253.1 1408796 . T G 1105.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1134,78,0
CP000253.1 1408812 . T A 1163.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1192,81,0
CP000253.1 1408813 . T C 1163.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1192,81,0
CP000253.1 1408816 . G A 1157.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1186,81,0
CP000253.1 1408837 . G A 1081.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:75:1110,75,0
CP000253.1 1408852 . A T 545.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:39:574,39,0
CP000253.1 1408855 . T A 532.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:561,39,0
CP000253.1 1408861 . G A 540.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:569,39,0
CP000253.1 1408864 . T C 535.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:564,39,0
CP000253.1 1408876 . T A 450.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:479,33,0
CP000253.1 1408878 . A G 449.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:478,33,0
CP000253.1 1408884 . G A 447.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:476,33,0
CP000253.1 1408886 . A T 442.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:471,33,0
CP000253.1 1408891 . A G 451.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:480,33,0
CP000253.1 1408894 . C A 448.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:477,33,0
CP000253.1 1408903 . T G 402.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:431,30,0
CP000253.1 1408907 . C T 403.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:432,30,0
CP000253.1 1408912 . G A 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 1408924 . T A 364.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:393,27,0
CP000253.1 1408936 . A T 590.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:619,42,0
CP000253.1 1409128 . C T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1409524 . A G 2879.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,127:127:99:2908,202,0
CP000253.1 1409720 . T G 2825.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.915;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.46;ReadPosRankSum=-1.186;SOR=0.643 GT:AD:DP:GQ:PL 1/1:1,110:111:99:2854,202,0
CP000253.1 1410568 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1410608 . G T 130.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:158,12,0
CP000253.1 1410663 . T C 168.90 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0
CP000253.1 1410715 . C T 227.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:18:256,18,0
CP000253.1 1410800 . C T 995.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3862;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,38:39:72:1024,72,0
CP000253.1 1410869 . C A 1405.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1434,99,0
CP000253.1 1411004 . G A 2197.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,93:94:99:2226,154,0
CP000253.1 1411010 . A T 2129.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2158,150,0
CP000253.1 1411022 . C T 2106.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3705;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2135,147,0
CP000253.1 1411154 . A G 528.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:557,39,0
CP000253.1 1411503 . T A 2203.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2232,157,0
CP000253.1 1411929 . G A 1868.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1897,129,0
CP000253.1 1411994 . T C 832.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.74;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:63:861,63,0
CP000253.1 1412042 . C T 556.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.84;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:42:585,42,0
CP000253.1 1412134 . C T 1226.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:87:1255,87,0
CP000253.1 1412222 . G A 2075.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6803;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2104,147,0
CP000253.1 1412232 . G T 2100.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2129,147,0
CP000253.1 1412282 . A G 2631.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2660,184,0
CP000253.1 1413057 . T C 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 1413058 . G C 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 1413069 . G T 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 1413081 . C T 138.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:166,12,0
CP000253.1 1413085 . T A 139.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.81;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:167,12,0
CP000253.1 1413090 . C T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 1413216 . G C 625.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:45:654,45,0
CP000253.1 1413264 . A C 574.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:603,42,0
CP000253.1 1413458 . C T 838.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2580;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:37:60:867,60,0
CP000253.1 1413672 . T C 1029.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:47:72:1058,72,0
CP000253.1 1413775 . C T 1648.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1677,114,0
CP000253.1 1413789 . T C 1668.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4166;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.96;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1697,117,0
CP000253.1 1413792 . C T 1726.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3107;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:79:99:1755,120,0
CP000253.1 1413855 . A T 2018.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8158;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.18;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2047,138,0
CP000253.1 1413957 . T C 1737.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.984;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.87;ReadPosRankSum=1.734;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,75:76:99:1766,123,0
CP000253.1 1413981 . T C 1717.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1746,123,0
CP000253.1 1413984 . G A 1650.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2304;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1679,117,0
CP000253.1 1413996 . G A 1635.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1664,117,0
CP000253.1 1414401 . A G 1409.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6736;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1438,99,0
CP000253.1 1414431 . A T 1512.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1541,105,0
CP000253.1 1414776 . C T 3116.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3145,214,0
CP000253.1 1415110 . C A 694.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:51:723,51,0
CP000253.1 1415254 . T A 313.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:342,24,0
CP000253.1 1415324 . A G 386.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:415,30,0
CP000253.1 1415812 . T C 614.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.96;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:643,45,0
CP000253.1 1415948 . C T 1170.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.526;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.09;ReadPosRankSum=0.000;SOR=0.900 GT:AD:DP:GQ:PL 1/1:2,51:53:84:1199,84,0
CP000253.1 1416196 . A T 1992.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2021,141,0
CP000253.1 1416200 . G A 1773.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1802,126,0
CP000253.1 1416317 . A T 1329.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2093;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,53:54:96:1358,96,0
CP000253.1 1416344 . T C 1314.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=1.077 GT:AD:DP:GQ:PL 1/1:0,53:53:93:1343,93,0
CP000253.1 1416486 . G A 668.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:48:697,48,0
CP000253.1 1416627 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1416823 . C A 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1417045 . C T 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1417048 . G A 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1417057 . A T 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 1417126 . A T 325.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:354,24,0
CP000253.1 1417213 . A T 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 1417419 . T C 318.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:347,24,0
CP000253.1 1417433 . C T 415.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:444,30,0
CP000253.1 1418052 . G A 2629.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.969;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0531;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.81;ReadPosRankSum=0.687;SOR=0.314 GT:AD:DP:GQ:PL 1/1:1,105:106:99:2658,187,0
CP000253.1 1418214 . C T 3099.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3128,223,0
CP000253.1 1419615 . C T 4035.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,171:175:99:4064,280,0
CP000253.1 1420047 . C A 481.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:510,36,0
CP000253.1 1420096 . A G 342.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:371,27,0
CP000253.1 1420255 . T C 394.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:423,30,0
CP000253.1 1422469 . A G 273.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:302,21,0
CP000253.1 1422640 . A G 1828.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5677;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1857,129,0
CP000253.1 1422841 . T C 3257.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6427;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3286,235,0
CP000253.1 1422937 . T A 3862.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3891,283,0
CP000253.1 1422967 . T C 3778.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3807,271,0
CP000253.1 1423153 . T C 4217.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,174:175:99:4246,304,0
CP000253.1 1423782 . C T 1908.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.005;DP=74;Dels=0.00;ExcessHet=3.0103;FS=4.068;HaplotypeScore=70.1345;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.79;ReadPosRankSum=0.586;SOR=1.017 GT:AD:DP:GQ:PL 1/1:1,73:74:99:1937,138,0
CP000253.1 1423861 . T A 1101.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=1.501 GT:AD:DP:GQ:PL 1/1:0,41:41:81:1130,81,0
CP000253.1 1424042 . T A 229.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:258,18,0
CP000253.1 1424045 . A G 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1424051 . T C 295.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:14:24:324,24,0
CP000253.1 1424086 . C G 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 1424147 . A G 419.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:448,30,0
CP000253.1 1424237 . T A 553.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:39:582,39,0
CP000253.1 1424240 . T C 553.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:39:582,39,0
CP000253.1 1424267 . T C 419.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:448,30,0
CP000253.1 1424283 . G A 415.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:444,30,0
CP000253.1 1424466 . T A 177.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:206,15,0
CP000253.1 1424486 . C T 146.03 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:12:174,12,0
CP000253.1 1424573 . T C 841.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.06;SOR=1.536 GT:AD:DP:GQ:PL 1/1:0,30:30:63:870,63,0
CP000253.1 1424591 . A C 853.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,32:32:63:882,63,0
CP000253.1 1425377 . G A 770.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,30:30:57:799,57,0
CP000253.1 1425452 . T C 613.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:642,45,0
CP000253.1 1425516 . G C 698.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:727,51,0
CP000253.1 1425636 . A T 434.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:463,33,0
CP000253.1 1425827 . C T 1700.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1729,117,0
CP000253.1 1426107 . C A 130.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:158,12,0
CP000253.1 1426224 . C G 264.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:293,21,0
CP000253.1 1426229 . A C 302.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:331,24,0
CP000253.1 1426286 . T A 559.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:42:588,42,0
CP000253.1 1426301 . C T 718.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:28:54:747,54,0
CP000253.1 1426349 . T A 1165.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1194,84,0
CP000253.1 1426391 . A G 1420.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:60:99:1449,102,0
CP000253.1 1426538 . A G 2872.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,124:124:99:2901,199,0
CP000253.1 1426583 . T G 2711.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2740,190,0
CP000253.1 1426598 . T C 2527.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.832;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.41;ReadPosRankSum=-1.251;SOR=0.253 GT:AD:DP:GQ:PL 1/1:1,107:108:99:2556,178,0
CP000253.1 1426685 . T A 1977.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2006,144,0
CP000253.1 1426712 . G A 1856.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0678;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1885,135,0
CP000253.1 1426868 . A T 1225.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3389;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:90:1254,90,0
CP000253.1 1426931 . T C 2446.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.804;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9267;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.31;ReadPosRankSum=1.293;SOR=0.884 GT:AD:DP:GQ:PL 1/1:1,92:94:99:2475,181,0
CP000253.1 1427120 . C T 4864.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.0830;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,199:201:99:4893,346,0
CP000253.1 1427413 . T C 4819.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.949;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6182;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=1.663;SOR=0.661 GT:AD:DP:GQ:PL 1/1:1,198:199:99:4848,340,0
CP000253.1 1428779 . C T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1429151 . A G 2876.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,126:126:99:2905,199,0
CP000253.1 1429514 . C T 561.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6611;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:590,42,0
CP000253.1 1429516 . G A 550.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:42:579,42,0
CP000253.1 1429583 . C T 593.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:45:622,45,0
CP000253.1 1429640 . C T 638.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:667,48,0
CP000253.1 1430354 . T G 600.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:629,45,0
CP000253.1 1430798 . G A 486.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:515,36,0
CP000253.1 1430873 . A C 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 1431068 . A T 571.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:42:600,42,0
CP000253.1 1431406 . T C 1470.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:62:99:1499,105,0
CP000253.1 1431427 . C T 1189.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1218,84,0
CP000253.1 1431463 . T A 1156.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1185,81,0
CP000253.1 1431499 . T C 1252.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1281,90,0
CP000253.1 1431895 . G T 747.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:776,54,0
CP000253.1 1432049 . T C 346.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:27:375,27,0
CP000253.1 1432081 . C G 207.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:236,18,0
CP000253.1 1432112 . A T 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 1432124 . C T 267.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:296,21,0
CP000253.1 1432171 . T C 661.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:690,48,0
CP000253.1 1432254 . A G 1347.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1376,96,0
CP000253.1 1432268 . G A 1328.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1357,96,0
CP000253.1 1432278 . G A 1345.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1374,96,0
CP000253.1 1432310 . C T 1321.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1350,96,0
CP000253.1 1432468 . G T 1764.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0989;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1793,123,0
CP000253.1 1432493 . A C 1981.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2010,138,0
CP000253.1 1432595 . C G 2300.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,97:99:99:2329,163,0
CP000253.1 1432939 . A G 1328.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1357,93,0
CP000253.1 1432956 . T A 1285.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:56:90:1314,90,0
CP000253.1 1433001 . G A 1401.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1430,99,0
CP000253.1 1433148 . G A 559.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:588,42,0
CP000253.1 1433163 . G A 585.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:24:45:614,45,0
CP000253.1 1433469 . A G 1814.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1843,126,0
CP000253.1 1433490 . T C 1973.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2002,138,0
CP000253.1 1433649 . C T 2641.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2670,187,0
CP000253.1 1433757 . C T 3008.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3037,208,0
CP000253.1 1433808 . T C 2827.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.850;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7309;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.99;ReadPosRankSum=1.451;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,122:124:99:2856,199,0
CP000253.1 1434048 . T A 302.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9558;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:331,24,0
CP000253.1 1434083 . C T 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 1434092 . A C 92.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0
CP000253.1 1434138 . A G 12.77 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=4.26;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:3:39,3,0
CP000253.1 1434140 . G C 92.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0
CP000253.1 1434141 . G T 78.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:106,9,0
CP000253.1 1434707 . A T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 1434733 . G A 185.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:214,15,0
CP000253.1 1434778 . C T 260.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:289,21,0
CP000253.1 1434897 . T A 1436.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4318;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:59:99:1465,102,0
CP000253.1 1435952 . A T 98.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:126,9,0
CP000253.1 1436054 . G C 447.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:476,33,0
CP000253.1 1436170 . C T 361.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:390,27,0
CP000253.1 1436171 . T A 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 1436177 . T C 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 1437241 . T C 401.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:430,30,0
CP000253.1 1438559 . C T 4919.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6231;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,201:203:99:4948,352,0
CP000253.1 1438639 . G A 3909.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.751;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.07;ReadPosRankSum=-0.277;SOR=1.088 GT:AD:DP:GQ:PL 1/1:1,149:150:99:3938,283,0
CP000253.1 1438641 . A G 3388.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.48;ReadPosRankSum=-1.680;SOR=0.437 GT:AD:DP:GQ:PL 1/1:1,132:134:99:3417,244,0
CP000253.1 1438643 . C T 3505.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3534,250,0
CP000253.1 1438648 . T G 3410.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.772;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0949;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.45;ReadPosRankSum=0.582;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,133:134:99:3439,247,0
CP000253.1 1438651 . T A 3468.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9615;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=1.153 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3497,250,0
CP000253.1 1438664 . T G 3552.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3902;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=1.187 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3581,256,0
CP000253.1 1438666 . A T 3434.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5508;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=1.153 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3463,247,0
CP000253.1 1438677 . C T 3449.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=1.222 GT:AD:DP:GQ:PL 1/1:0,133:135:99:3478,250,0
CP000253.1 1438706 . T C 3209.76 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9305;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3238,229,0
CP000253.1 1438747 . T C 1787.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.196;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.68;ReadPosRankSum=0.699;SOR=0.554 GT:AD:DP:GQ:PL 1/1:1,66:67:99:1816,131,0
CP000253.1 1438750 . A T 1737.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.694;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.33;ReadPosRankSum=0.736;SOR=0.534 GT:AD:DP:GQ:PL 1/1:1,65:66:95:1766,95,0
CP000253.1 1438753 . G T 1822.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7392;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.04;SOR=1.341 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1851,132,0
CP000253.1 1438755 . T C 1786.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.07;SOR=1.376 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1815,129,0
CP000253.1 1438756 . G C 1821.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.9654;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.60;SOR=1.376 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1850,132,0
CP000253.1 1438759 . C T 1845.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.97;SOR=1.376 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1874,132,0
CP000253.1 1438761 . G T 1801.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.30;SOR=1.376 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1830,132,0
CP000253.1 1438762 . T A 1799.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.27;SOR=1.376 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1828,129,0
CP000253.1 1438765 . C A 1834.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.80;SOR=1.376 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1863,132,0
CP000253.1 1438768 . A T 1823.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.63;SOR=1.376 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1852,132,0
CP000253.1 1439005 . T A 589.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=28.08;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:45:618,45,0
CP000253.1 1439008 . C T 591.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=28.18;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:45:620,45,0
CP000253.1 1439011 . T C 602.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=28.70;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:45:631,45,0
CP000253.1 1439017 . T A 596.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=28.42;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:45:625,45,0
CP000253.1 1439020 . T C 599.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=28.56;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:45:628,45,0
CP000253.1 1439023 . C T 587.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=27.99;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:45:616,45,0
CP000253.1 1439026 . A G 550.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=26.23;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:42:579,42,0
CP000253.1 1439032 . A G 596.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=28.42;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:45:625,45,0
CP000253.1 1439035 . A T 600.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=28.61;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:45:629,45,0
CP000253.1 1439038 . T A 599.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=28.56;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:45:628,45,0
CP000253.1 1439044 . C T 632.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.10;MQ0=0;QD=28.76;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:48:661,48,0
CP000253.1 1439047 . T A 576.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.10;MQ0=0;QD=26.22;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:45:605,45,0
CP000253.1 1439056 . T A 634.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.14;MQ0=0;QD=27.60;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:48:663,48,0
CP000253.1 1439059 . C T 636.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.14;MQ0=0;QD=27.69;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:48:665,48,0
CP000253.1 1439062 . G T 640.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.14;MQ0=0;QD=27.86;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:48:669,48,0
CP000253.1 1439070 . A C 639.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.14;MQ0=0;QD=27.82;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:48:668,48,0
CP000253.1 1439073 . G T 642.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.053;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.14;MQ0=0;MQRankSum=-0.258;QD=27.95;ReadPosRankSum=1.435;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,22:23:48:671,48,0
CP000253.1 1439080 . T A 605.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.14;MQ0=0;QD=26.34;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:45:634,45,0
CP000253.1 1439083 . G T 683.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.18;MQ0=0;QD=28.49;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:51:712,51,0
CP000253.1 1439087 . G T 767.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.27;MQ0=0;QD=28.44;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:57:796,57,0
CP000253.1 1439095 . T C 884.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.26;MQ0=3;QD=21.58;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,41:41:69:913,69,0
CP000253.1 1439101 . T A 927.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.26;MQ0=3;QD=22.63;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,41:41:72:956,72,0
CP000253.1 1439104 . A T 923.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.26;MQ0=3;QD=22.53;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,41:41:72:952,72,0
CP000253.1 1439116 . G A 969.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=53.43;MQ0=3;QD=23.09;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,42:42:75:998,75,0
CP000253.1 1439119 . T A 948.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.43;MQ0=3;QD=22.59;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,42:42:75:977,75,0
CP000253.1 1439125 . A G 953.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.43;MQ0=3;QD=22.71;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,42:42:75:982,75,0
CP000253.1 1439131 . C T 961.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.43;MQ0=3;QD=22.90;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,42:42:75:990,75,0
CP000253.1 1439133 . G A 928.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.43;MQ0=3;QD=22.11;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,42:42:72:957,72,0
CP000253.1 1439140 . A T 889.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.021;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.43;MQ0=3;MQRankSum=-0.482;QD=21.18;ReadPosRankSum=1.293;SOR=0.733 GT:AD:DP:GQ:PL 1/1:1,41:42:72:918,72,0
CP000253.1 1439143 . G A 955.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.43;MQ0=3;QD=22.76;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,42:42:75:984,75,0
CP000253.1 1439149 . C T 1005.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.75;MQ0=3;QD=22.86;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1034,78,0
CP000253.1 1439167 . G A 1008.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.59;MQ0=3;QD=23.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1037,78,0
CP000253.1 1439175 . G A 707.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.00;MQ0=2;QD=25.28;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,28:28:57:736,57,0
CP000253.1 1439179 . C T 654.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.73;MQ0=2;QD=24.25;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,27:27:54:683,54,0
CP000253.1 1439185 . T A 586.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.74;MQ0=2;QD=24.45;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,24:24:48:615,48,0
CP000253.1 1439189 . G T 512.98 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.219;DP=24;Dels=0.00;ExcessHet=3.0103;FS=3.424;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.74;MQ0=2;MQRankSum=-0.503;QD=21.37;ReadPosRankSum=-0.239;SOR=0.663 GT:AD:DP:GQ:PL 1/1:1,23:24:13:541,13,0
CP000253.1 1439191 . A G 504.10 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.010;DP=24;Dels=0.00;ExcessHet=3.0103;FS=3.424;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.74;MQ0=2;MQRankSum=-0.503;QD=21.00;ReadPosRankSum=-0.239;SOR=0.663 GT:AD:DP:GQ:PL 1/1:1,23:24:11:532,11,0
CP000253.1 1439194 . T A 507.98 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.960;DP=24;Dels=0.00;ExcessHet=3.0103;FS=3.424;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.74;MQ0=2;MQRankSum=-0.503;QD=21.17;ReadPosRankSum=-0.239;SOR=0.663 GT:AD:DP:GQ:PL 1/1:1,23:24:13:536,13,0
CP000253.1 1439195 . A G 545.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.74;MQ0=2;QD=23.73;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,23:23:45:574,45,0
CP000253.1 1439196 . C T 544.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.74;MQ0=2;QD=23.69;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,23:23:45:573,45,0
CP000253.1 1439197 . A T 527.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.74;MQ0=2;QD=22.95;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,23:23:45:556,45,0
CP000253.1 1439208 . G A 565.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.74;MQ0=2;QD=23.57;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,24:24:48:594,48,0
CP000253.1 1439209 . C A 570.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.74;MQ0=2;QD=23.78;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,24:24:48:599,48,0
CP000253.1 1439212 . C T 580.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.74;MQ0=2;QD=24.20;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,24:24:48:609,48,0
CP000253.1 1439215 . C T 665.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.73;MQ0=2;QD=24.66;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,27:27:54:694,54,0
CP000253.1 1439227 . A T 2050.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.19;MQ0=2;QD=23.30;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2079,147,0
CP000253.1 1439230 . G A 2128.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.31;MQ0=2;QD=23.14;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2157,153,0
CP000253.1 1439239 . T C 2118.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.31;MQ0=2;QD=23.03;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2147,153,0
CP000253.1 1439248 . G T 2256.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.43;MQ0=2;QD=23.51;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2285,162,0
CP000253.1 1439251 . C A 2286.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.43;MQ0=2;QD=23.82;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2315,165,0
CP000253.1 1439266 . G A 2229.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.65;MQ0=1;QD=24.50;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2258,159,0
CP000253.1 1439269 . C T 2235.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=58.65;MQ0=1;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2264,160,0
CP000253.1 1439272 . T A 2232.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=58.65;MQ0=1;QD=24.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2261,160,0
CP000253.1 1439274 . A G 2154.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=58.65;MQ0=1;QD=23.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2183,153,0
CP000253.1 1439275 . C T 2215.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=58.65;MQ0=1;QD=24.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2244,159,0
CP000253.1 1439278 . A C 2181.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=58.67;MQ0=1;QD=23.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2210,156,0
CP000253.1 1439290 . A G 2584.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=58.85;MQ0=1;QD=23.71;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2613,187,0
CP000253.1 1439293 . G A 2612.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=58.85;MQ0=1;QD=23.97;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2641,184,0
CP000253.1 1439303 . T C 2665.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4620;MLEAC=2;MLEAF=1.00;MQ=58.88;MQ0=1;QD=24.02;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2694,187,0
CP000253.1 1439313 . C A 2763.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.054;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3262;MLEAC=2;MLEAF=1.00;MQ=59.18;MQ0=0;MQRankSum=4.817;QD=24.03;ReadPosRankSum=0.460;SOR=0.450 GT:AD:DP:GQ:PL 1/1:1,114:115:99:2792,196,0
CP000253.1 1439314 . A C 2826.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.066;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=59.19;MQ0=0;MQRankSum=-0.169;QD=24.16;ReadPosRankSum=-0.851;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,116:117:99:2855,199,0
CP000253.1 1439340 . A G 2985.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2702;MLEAC=2;MLEAF=1.00;MQ=59.11;MQ0=0;QD=23.51;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3014,211,0
CP000253.1 1439350 . T C 3025.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5981;MLEAC=2;MLEAF=1.00;MQ=59.01;MQ0=0;QD=24.21;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3054,214,0
CP000253.1 1439359 . T C 1769.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.43;MQ0=0;QD=26.03;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1798,126,0
CP000253.1 1439361 . A G 1775.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.43;MQ0=0;QD=26.11;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1804,126,0
CP000253.1 1439366 . A G 1641.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.38;MQ0=0;QD=26.48;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1670,117,0
CP000253.1 1439367 . G T 1642.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.38;MQ0=0;QD=26.50;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1671,117,0
CP000253.1 1439376 . C T 1606.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.38;MQ0=0;QD=25.92;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1635,114,0
CP000253.1 1439377 . A G 1648.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.38;MQ0=0;QD=26.59;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1677,117,0
CP000253.1 1439383 . T C 1642.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.38;MQ0=0;QD=26.50;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1671,117,0
CP000253.1 1439386 . A T 1645.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.38;MQ0=0;QD=26.54;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1674,117,0
CP000253.1 1439389 . G A 1642.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.38;MQ0=0;QD=26.50;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1671,117,0
CP000253.1 1439395 . T G 1764.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.21;MQ0=0;QD=25.21;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1793,129,0
CP000253.1 1439401 . T A 1804.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.21;MQ0=0;QD=25.78;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1833,129,0
CP000253.1 1439405 . C T 1822.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.21;MQ0=0;QD=26.04;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1851,129,0
CP000253.1 1439413 . G T 1823.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.02;MQ0=0;QD=25.69;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1852,129,0
CP000253.1 1439422 . T A 1811.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.99;MQ0=0;QD=25.88;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1840,129,0
CP000253.1 1439425 . A T 1658.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.87;MQ0=0;QD=25.13;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1687,117,0
CP000253.1 1439431 . C T 1693.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.87;MQ0=0;QD=25.66;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1722,120,0
CP000253.1 1439434 . A G 1635.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.87;MQ0=0;QD=25.17;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1664,117,0
CP000253.1 1439437 . A G 1668.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=57.87;MQ0=0;QD=25.28;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1697,120,0
CP000253.1 1439458 . A G 1588.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9973;MLEAC=2;MLEAF=1.00;MQ=57.42;MQ0=0;QD=26.48;SOR=0.986 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1617,114,0
CP000253.1 1439464 . G A 1372.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.39;MQ0=0;QD=24.96;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1401,99,0
CP000253.1 1439469 . A T 1034.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.46;MQ0=0;QD=25.24;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:75:1063,75,0
CP000253.1 1439476 . A G 917.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.84;MQ0=0;QD=26.22;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:66:946,66,0
CP000253.1 1439709 . T C 1170.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:49:84:1199,84,0
CP000253.1 1439806 . A T 2159.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6364;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,93:94:99:2188,154,0
CP000253.1 1439817 . C T 2242.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7777;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2271,157,0
CP000253.1 1439900 . A T 3058.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5293;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3087,214,0
CP000253.1 1439959 . C T 3104.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2446;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=23.70;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,131:133:99:3133,220,0
CP000253.1 1440004 . T C 960.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=35;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5498;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.26;ReadPosRankSum=1.632;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,33:34:72:989,72,0
CP000253.1 1440006 . G A 886.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:33:66:915,66,0
CP000253.1 1440007 . T A 917.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:34:69:946,69,0
CP000253.1 1440010 . A C 967.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.944;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.46;ReadPosRankSum=1.224;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,33:34:72:996,72,0
CP000253.1 1440013 . C T 917.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.537;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.99;ReadPosRankSum=1.224;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,33:34:36:946,36,0
CP000253.1 1440016 . T A 917.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.99;ReadPosRankSum=1.224;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,33:34:69:946,69,0
CP000253.1 1440019 . C A 949.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.93;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:72:978,72,0
CP000253.1 1440031 . G A 964.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.986;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.38;ReadPosRankSum=1.224;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,33:34:72:993,72,0
CP000253.1 1440034 . C G 913.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.69;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:34:72:942,72,0
CP000253.1 1440037 . G A 940.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.67;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:72:969,72,0
CP000253.1 1440042 . G T 957.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.17;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:75:986,75,0
CP000253.1 1440046 . A T 1008.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.67;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:75:1037,75,0
CP000253.1 1440052 . C T 972.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.61;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:72:1001,72,0
CP000253.1 1440055 . C T 954.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.08;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:72:983,72,0
CP000253.1 1440058 . A T 963.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.35;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:72:992,72,0
CP000253.1 1440060 . T C 980.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.85;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:75:1009,75,0
CP000253.1 1440064 . C T 992.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.20;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:75:1021,75,0
CP000253.1 1440067 . A T 989.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.11;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:75:1018,75,0
CP000253.1 1440076 . A T 955.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.96;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:34:72:984,72,0
CP000253.1 1440079 . A T 958.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.20;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:75:987,75,0
CP000253.1 1440082 . T C 978.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3744;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.79;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:75:1007,75,0
CP000253.1 1440100 . A T 1504.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1533,111,0
CP000253.1 1440106 . T C 1638.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1667,120,0
CP000253.1 1440118 . A C 1675.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.948;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.78;ReadPosRankSum=1.155;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,64:65:99:1704,123,0
CP000253.1 1440130 . G T 1554.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1583,114,0
CP000253.1 1440133 . T C 1620.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.47;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1649,120,0
CP000253.1 1440139 . A G 1643.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.86;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1672,120,0
CP000253.1 1440142 . C T 1660.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.15;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1689,123,0
CP000253.1 1440199 . A G 1451.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.39;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1480,108,0
CP000253.1 1440208 . T C 1427.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.94;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1456,105,0
CP000253.1 1440331 . G A 3437.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3466,238,0
CP000253.1 1440341 . T A 3377.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2703;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3406,235,0
CP000253.1 1440355 . A G 3378.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.993;DP=147;Dels=0.00;ExcessHet=3.0103;FS=3.193;HaplotypeScore=6.2277;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.14;ReadPosRankSum=1.271;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,145:147:99:3407,235,0
CP000253.1 1440364 . G A 3419.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9412;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3448,238,0
CP000253.1 1440367 . T G 3400.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.058;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0883;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.98;ReadPosRankSum=1.500;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,147:148:99:3429,235,0
CP000253.1 1440388 . T C 3617.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3646,250,0
CP000253.1 1440405 . T C 3671.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.226;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.09;ReadPosRankSum=-0.905;SOR=0.233 GT:AD:DP:GQ:PL 1/1:1,158:159:99:3700,253,0
CP000253.1 1440421 . T C 3621.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3650,250,0
CP000253.1 1440437 . C G 3590.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3619,247,0
CP000253.1 1440441 . A G 3622.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3651,250,0
CP000253.1 1440442 . T C 3630.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3659,250,0
CP000253.1 1440454 . T G 3549.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5047;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3578,244,0
CP000253.1 1440461 . C T 3536.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,151:152:99:3565,244,0
CP000253.1 1440470 . A G 3334.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4862;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3363,229,0
CP000253.1 1440479 . G A 3230.05 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3470;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3259,223,0
CP000253.1 1440482 . T C 3277.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3306,226,0
CP000253.1 1440488 . C A 3204.83 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.539;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.06;ReadPosRankSum=1.009;SOR=0.831 GT:AD:DP:GQ:PL 1/1:2,137:139:99:3232,223,0
CP000253.1 1440490 . A G 3197.05 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.959;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.00;ReadPosRankSum=1.733;SOR=0.273 GT:AD:DP:GQ:PL 1/1:1,138:139:99:3225,222,0
CP000253.1 1440500 . T C 3302.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8928;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3331,229,0
CP000253.1 1440515 . T A 2640.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2669,184,0
CP000253.1 1440518 . G A 2615.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2644,181,0
CP000253.1 1440521 . A G 2618.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2647,181,0
CP000253.1 1440527 . G A 2623.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2652,181,0
CP000253.1 1440530 . G C 2616.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2645,181,0
CP000253.1 1440533 . G T 2654.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2683,184,0
CP000253.1 1440548 . A T 2237.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2266,157,0
CP000253.1 1440581 . T C 1535.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.942;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.38;ReadPosRankSum=-0.358;SOR=0.535 GT:AD:DP:GQ:PL 1/1:1,62:63:99:1564,108,0
CP000253.1 1440602 . A T 871.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2304;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:63:900,63,0
CP000253.1 1440605 . G A 890.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:66:919,66,0
CP000253.1 1440608 . T A 766.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:30:57:795,57,0
CP000253.1 1440635 . T A 821.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:63:850,63,0
CP000253.1 1440641 . T A 752.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:57:781,57,0
CP000253.1 1440659 . A T 805.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:60:834,60,0
CP000253.1 1440662 . G A 861.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:63:890,63,0
CP000253.1 1440674 . T A 834.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:63:863,63,0
CP000253.1 1440689 . G A 943.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:69:972,69,0
CP000253.1 1440692 . T C 888.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:66:917,66,0
CP000253.1 1440707 . G A 975.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:43:72:1004,72,0
CP000253.1 1440800 . A T 2868.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,115:117:99:2897,205,0
CP000253.1 1440890 . T A 3912.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.712;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.86;ReadPosRankSum=-0.592;SOR=0.609 GT:AD:DP:GQ:PL 1/1:1,163:167:99:3941,274,0
CP000253.1 1441073 . T G 2636.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.795;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2049;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.41;ReadPosRankSum=0.770;SOR=0.496 GT:AD:DP:GQ:PL 1/1:1,107:108:99:2665,190,0
CP000253.1 1441433 . A G 929.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:69:958,69,0
CP000253.1 1441436 . A T 923.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:952,66,0
CP000253.1 1441439 . T G 970.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:69:999,69,0
CP000253.1 1441445 . T A 978.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1007,69,0
CP000253.1 1441448 . G A 974.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1003,69,0
CP000253.1 1441454 . G C 903.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:63:932,63,0
CP000253.1 1441466 . A G 801.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:57:830,57,0
CP000253.1 1441487 . C T 850.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:879,60,0
CP000253.1 1441493 . C T 857.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:886,60,0
CP000253.1 1441504 . T A 817.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.52;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:57:846,57,0
CP000253.1 1441511 . A T 847.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:60:876,60,0
CP000253.1 1441516 . C T 853.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:60:882,60,0
CP000253.1 1441523 . A G 877.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:63:906,63,0
CP000253.1 1441562 . T A 700.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:51:729,51,0
CP000253.1 1441568 . G A 711.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:51:740,51,0
CP000253.1 1441602 . A G 356.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:385,27,0
CP000253.1 1441604 . G A 362.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:391,27,0
CP000253.1 1441636 . T C 182.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.29;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:211,15,0
CP000253.1 1441647 . C G 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1441673 . C T 184.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:213,15,0
CP000253.1 1442653 . T C 2326.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2355,160,0
CP000253.1 1442659 . A G 2292.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2321,160,0
CP000253.1 1442788 . A G 1820.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1849,129,0
CP000253.1 1442915 . C T 3351.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4322;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.47;SOR=1.460 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3380,244,0
CP000253.1 1442927 . A C 3479.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5189;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=1.353 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3508,250,0
CP000253.1 1445036 . C T 553.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:39:582,39,0
CP000253.1 1445064 . A G 463.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:33:492,33,0
CP000253.1 1445120 . G A 419.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:448,30,0
CP000253.1 1445420 . A T 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 1445537 . T A 581.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:42:610,42,0
CP000253.1 1446278 . C T 1660.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5819;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=1.249 GT:AD:DP:GQ:PL 1/1:0,65:67:99:1689,120,0
CP000253.1 1446294 . G A 1892.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=1.164 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1921,135,0
CP000253.1 1446389 . G A 2640.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2302;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2669,190,0
CP000253.1 1446404 . T C 2644.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=1.069 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2673,193,0
CP000253.1 1446584 . A T 2299.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.984;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=0.848;SOR=0.312 GT:AD:DP:GQ:PL 1/1:1,93:94:99:2328,163,0
CP000253.1 1446668 . A G 1975.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.756;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.00;ReadPosRankSum=0.319;SOR=0.439 GT:AD:DP:GQ:PL 1/1:1,75:76:99:2004,144,0
CP000253.1 1446781 . A T 1631.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1660,120,0
CP000253.1 1447344 . G A 4050.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4045;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4079,286,0
CP000253.1 1447578 . T A 5081.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,205:207:99:5110,358,0
CP000253.1 1447628 . A G 5507.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,219:221:99:5536,388,0
CP000253.1 1449128 . G A 2004.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2033,141,0
CP000253.1 1449178 . C G 2137.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2687;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2166,150,0
CP000253.1 1449843 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.20;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:3:45,3,0
CP000253.1 1449844 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.20;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:3:45,3,0
CP000253.1 1450183 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1450335 . T G 92.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:120,9,0
CP000253.1 1451891 . A T 2227.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2256,160,0
CP000253.1 1452095 . C T 1394.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1423,99,0
CP000253.1 1452097 . T C 1387.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1416,99,0
CP000253.1 1452131 . C T 1064.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,40:41:78:1093,78,0
CP000253.1 1452219 . C A 568.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:42:597,42,0
CP000253.1 1452221 . A T 577.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.802;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.22;ReadPosRankSum=1.737;SOR=0.343 GT:AD:DP:GQ:PL 1/1:1,25:26:42:606,42,0
CP000253.1 1452312 . G C 1240.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:87:1269,87,0
CP000253.1 1452337 . C T 1335.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1364,93,0
CP000253.1 1452354 . C A 1425.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1454,99,0
CP000253.1 1452573 . C T 1341.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.445;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.36;ReadPosRankSum=0.021;SOR=0.762 GT:AD:DP:GQ:PL 1/1:2,58:61:58:1370,58,0
CP000253.1 1452801 . G A 1888.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4648;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1917,132,0
CP000253.1 1452807 . T A 1978.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2007,138,0
CP000253.1 1452873 . A T 1301.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.611;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9991;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=0.032;SOR=0.581 GT:AD:DP:GQ:PL 1/1:1,54:56:96:1330,96,0
CP000253.1 1453161 . G A 2020.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.21;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2049,141,0
CP000253.1 1453182 . A C 1881.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5711;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:86:99:1910,129,0
CP000253.1 1453393 . A C 567.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,22:22:42:596,42,0
CP000253.1 1453461 . T C 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1453519 . A T 142.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:170,12,0
CP000253.1 1454422 . C A 2919.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.805;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.7907;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.55;ReadPosRankSum=2.076;SOR=0.390 GT:AD:DP:GQ:PL 1/1:3,121:126:99:2948,217,0
CP000253.1 1454427 . C T 3037.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3385;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3066,223,0
CP000253.1 1454478 . G A 3021.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9836;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,115:117:99:3050,223,0
CP000253.1 1454481 . G C 3030.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3059,223,0
CP000253.1 1454510 . T C 2799.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.696;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=-0.140;SOR=0.771 GT:AD:DP:GQ:PL 1/1:1,110:111:99:2828,208,0
CP000253.1 1454528 . A T 2722.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0116;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.50;SOR=1.261 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2751,202,0
CP000253.1 1454534 . T G 2693.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1449;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.49;SOR=1.298 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2722,199,0
CP000253.1 1454535 . G C 2724.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1449;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.80;SOR=1.298 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2753,202,0
CP000253.1 1454547 . T C 2880.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2777;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.97;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2909,211,0
CP000253.1 1454555 . T A 2645.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.467;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.46;ReadPosRankSum=1.429;SOR=0.859 GT:AD:DP:GQ:PL 1/1:2,98:100:99:2674,196,0
CP000253.1 1454563 . G A 2583.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.493;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.20;ReadPosRankSum=2.308;SOR=0.859 GT:AD:DP:GQ:PL 1/1:2,93:95:99:2612,190,0
CP000253.1 1454572 . G T 1716.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.14;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1745,126,0
CP000253.1 1454573 . A G 1647.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.01;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1676,123,0
CP000253.1 1454579 . T C 1720.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.21;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1749,129,0
CP000253.1 1454582 . T A 1684.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.62;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1713,123,0
CP000253.1 1454587 . A T 1693.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.23;SOR=1.160 GT:AD:DP:GQ:PL 1/1:0,60:61:99:1722,126,0
CP000253.1 1454588 . A T 1698.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.85;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1727,126,0
CP000253.1 1454589 . T A 1662.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.936;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.26;ReadPosRankSum=-0.085;SOR=0.892 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1691,123,0
CP000253.1 1454593 . T C 1647.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.01;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1676,120,0
CP000253.1 1454602 . C T 3076.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3105,223,0
CP000253.1 1454605 . T C 3227.04 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.67;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3255,238,0
CP000253.1 1454615 . T A 3192.79 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3221,232,0
CP000253.1 1454617 . C T 3195.80 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3224,229,0
CP000253.1 1454620 . A C 3158.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3187,226,0
CP000253.1 1454638 . T C 3728.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7363;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3757,268,0
CP000253.1 1454674 . C T 3890.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3919,277,0
CP000253.1 1454719 . T C 3618.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9521;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3647,262,0
CP000253.1 1454729 . A C 3391.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.513;DP=137;Dels=0.00;ExcessHet=3.0103;FS=3.238;HaplotypeScore=13.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.025;SOR=0.413 GT:AD:DP:GQ:PL 1/1:1,136:137:99:3420,250,0
CP000253.1 1455374 . G A 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 1455568 . T A 1667.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4516;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1696,117,0
CP000253.1 1455587 . G T 1614.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.789;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.74;ReadPosRankSum=0.855;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1643,114,0
CP000253.1 1455601 . A T 1628.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1657,114,0
CP000253.1 1455697 . G A 1137.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1166,81,0
CP000253.1 1455736 . C T 1207.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3323;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1236,87,0
CP000253.1 1455820 . T A 1233.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:90:1262,90,0
CP000253.1 1455925 . A G 2459.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5412;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2488,178,0
CP000253.1 1455928 . T A 2430.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.86;ReadPosRankSum=1.734;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,93:94:99:2459,175,0
CP000253.1 1455994 . A G 3378.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.84;ReadPosRankSum=0.178;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,135:136:99:3407,241,0
CP000253.1 1456036 . T C 3218.75 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.850;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=1.249;SOR=0.342 GT:AD:DP:GQ:PL 1/1:1,135:137:99:3247,226,0
CP000253.1 1456084 . A G 3705.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5781;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.31;ReadPosRankSum=0.360;SOR=0.345 GT:AD:DP:GQ:PL 1/1:1,158:159:99:3734,259,0
CP000253.1 1456114 . A G 3366.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3395,235,0
CP000253.1 1456180 . T C 3035.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3235;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,121:122:99:3064,214,0
CP000253.1 1456376 . C A 1160.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5528;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1189,84,0
CP000253.1 1456576 . T A 2227.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2256,154,0
CP000253.1 1456640 . C T 1665.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.001;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.82;ReadPosRankSum=1.733;SOR=0.311 GT:AD:DP:GQ:PL 1/1:1,72:73:99:1694,117,0
CP000253.1 1456648 . T G 1636.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1665,117,0
CP000253.1 1456781 . C T 711.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:51:740,51,0
CP000253.1 1457090 . C T 446.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:475,33,0
CP000253.1 1457216 . A G 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 1458145 . A G 271.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:21:300,21,0
CP000253.1 1458184 . A T 431.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:33:460,33,0
CP000253.1 1458400 . T C 2482.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.921;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8246;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.65;ReadPosRankSum=0.413;SOR=0.291 GT:AD:DP:GQ:PL 1/1:1,104:105:99:2511,175,0
CP000253.1 1458403 . T C 2420.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2449,175,0
CP000253.1 1458438 . A G 2960.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.882 GT:AD:DP:GQ:PL 1/1:0,125:125:99:2989,208,0
CP000253.1 1458439 . T C 2931.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.45;ReadPosRankSum=0.042;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,124:125:99:2960,208,0
CP000253.1 1458442 . A G 3087.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5633;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3116,217,0
CP000253.1 1458895 . A T 583.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:612,42,0
CP000253.1 1458901 . A G 588.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:617,42,0
CP000253.1 1458913 . G A 709.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.18;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:51:738,51,0
CP000253.1 1458915 . A T 723.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:51:752,51,0
CP000253.1 1459593 . A T 49.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.59;MQ0=0;QD=16.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:77,6,0
CP000253.1 1459605 . C T 49.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.59;MQ0=0;QD=16.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:77,6,0
CP000253.1 1459608 . C T 49.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=51.59;MQ0=0;QD=16.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:77,6,0
CP000253.1 1459611 . A G 49.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=51.59;MQ0=0;QD=16.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:77,6,0
CP000253.1 1459620 . T C 42.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8874;MLEAC=2;MLEAF=1.00;MQ=51.59;MQ0=0;QD=14.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:70,6,0
CP000253.1 1459626 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9933;MLEAC=2;MLEAF=1.00;MQ=51.59;MQ0=0;QD=6.20;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:3:45,3,0
CP000253.1 1459644 . A G 31.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=46.82;MQ0=0;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0
CP000253.1 1459695 . T C 79.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=36.19;MQ0=0;QD=26.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:107,9,0
CP000253.1 1459698 . T A 85.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=36.19;MQ0=0;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0
CP000253.1 1459716 . C A 414.77 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9998;MLEAC=1;MLEAF=0.500;MQ=37.47;MQ0=1;QD=34.56;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,12:13:33:437,33,0
CP000253.1 1459722 . G C 433.77 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9998;MLEAC=2;MLEAF=1.00;MQ=37.47;MQ0=1;QD=33.37;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,13:13:36:462,36,0
CP000253.1 1459724 . G A 435.77 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9998;MLEAC=2;MLEAF=1.00;MQ=37.47;MQ0=1;QD=33.52;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,13:13:36:464,36,0
CP000253.1 1459725 . T C 448.77 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9998;MLEAC=2;MLEAF=1.00;MQ=37.47;MQ0=1;QD=34.52;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,13:13:36:477,36,0
CP000253.1 1459730 . C T 577.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.51;MQ0=1;QD=32.10;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,18:18:45:606,45,0
CP000253.1 1459755 . A G 1697.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7386;MLEAC=2;MLEAF=1.00;MQ=45.04;MQ0=3;QD=25.72;SOR=2.658 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1726,132,0
CP000253.1 1459766 . T C 1978.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8824;MLEAC=2;MLEAF=1.00;MQ=46.43;MQ0=3;QD=26.74;SOR=2.617 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2007,153,0
CP000253.1 1459788 . G C 875.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.198;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.890;HaplotypeScore=6.0435;MLEAC=1;MLEAF=0.500;MQ=49.08;MQ0=3;MQRankSum=1.877;QD=8.67;ReadPosRankSum=-2.685;SOR=0.506 GT:AD:DP:GQ:PL 0/1:63,38:101:99:904,0,1333
CP000253.1 1459794 . A T 931.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.805;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.865;HaplotypeScore=7.2426;MLEAC=1;MLEAF=0.500;MQ=49.28;MQ0=5;MQRankSum=1.777;QD=8.47;ReadPosRankSum=-2.191;SOR=0.544 GT:AD:DP:GQ:PL 0/1:68,42:111:99:960,0,1504
CP000253.1 1459803 . A G 3053.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0300;MLEAC=2;MLEAF=1.00;MQ=50.16;MQ0=5;QD=25.45;SOR=1.870 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3082,232,0
CP000253.1 1459818 . C T 1053.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.049;DP=128;Dels=0.00;ExcessHet=3.0103;FS=1.564;HaplotypeScore=5.2056;MLEAC=1;MLEAF=0.500;MQ=50.56;MQ0=5;MQRankSum=1.830;QD=8.23;ReadPosRankSum=-1.867;SOR=0.512 GT:AD:DP:GQ:PL 0/1:76,52:128:99:1082,0,1610
CP000253.1 1459833 . G A 1932.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.207;DP=153;Dels=0.00;ExcessHet=3.0103;FS=2.381;HaplotypeScore=8.5508;MLEAC=1;MLEAF=0.500;MQ=51.63;MQ0=5;MQRankSum=-1.804;QD=12.63;ReadPosRankSum=0.328;SOR=1.053 GT:AD:DP:GQ:PL 0/1:57,96:153:99:1961,0,1094
CP000253.1 1459855 . A T 2254.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.440;DP=182;Dels=0.00;ExcessHet=3.0103;FS=1.278;HaplotypeScore=11.7019;MLEAC=1;MLEAF=0.500;MQ=53.11;MQ0=5;MQRankSum=-1.041;QD=12.46;ReadPosRankSum=-0.676;SOR=0.866 GT:AD:DP:GQ:PL 0/1:64,117:182:99:2283,0,1199
CP000253.1 1459866 . A G 2401.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.093;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.560;HaplotypeScore=12.6651;MLEAC=1;MLEAF=0.500;MQ=53.72;MQ0=3;MQRankSum=-0.178;QD=12.19;ReadPosRankSum=0.265;SOR=0.831 GT:AD:DP:GQ:PL 0/1:72,125:200:99:2430,0,1396
CP000253.1 1459869 . A G 4474.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2556;MLEAC=2;MLEAF=1.00;MQ=53.76;MQ0=3;QD=22.26;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,201:201:99:4503,322,0
CP000253.1 1459883 . T C 4883.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0722;MLEAC=2;MLEAF=1.00;MQ=54.24;MQ0=3;QD=22.20;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,220:221:99:4912,349,0
CP000253.1 1459890 . T C 2915.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.805;DP=236;Dels=0.00;ExcessHet=3.0103;FS=2.318;HaplotypeScore=22.9039;MLEAC=1;MLEAF=0.500;MQ=54.07;MQ0=3;MQRankSum=0.754;QD=12.35;ReadPosRankSum=-0.824;SOR=0.871 GT:AD:DP:GQ:PL 0/1:85,151:236:99:2944,0,1530
CP000253.1 1459908 . A T 1526.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.752;DP=242;Dels=0.00;ExcessHet=3.0103;FS=1.070;HaplotypeScore=20.8958;MLEAC=1;MLEAF=0.500;MQ=54.32;MQ0=1;MQRankSum=-0.871;QD=6.34;ReadPosRankSum=1.140;SOR=0.581 GT:AD:DP:GQ:PL 0/1:154,87:242:99:1555,0,3026
CP000253.1 1459911 . G A 1505.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.350;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0080;MLEAC=1;MLEAF=0.500;MQ=54.32;MQ0=1;MQRankSum=-0.820;QD=6.30;ReadPosRankSum=1.240;SOR=0.647 GT:AD:DP:GQ:PL 0/1:154,85:242:99:1534,0,3014
CP000253.1 1459938 . T A 5379.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.761;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1053;MLEAC=2;MLEAF=1.00;MQ=54.08;MQ0=1;MQRankSum=-0.717;QD=21.87;ReadPosRankSum=-1.372;SOR=0.230 GT:AD:DP:GQ:PL 1/1:1,245:250:99:5408,382,0
CP000253.1 1459941 . C T 5526.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1394;MLEAC=2;MLEAF=1.00;MQ=54.08;MQ0=1;QD=22.11;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,250:250:99:5555,388,0
CP000253.1 1459968 . T C 5312.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8886;MLEAC=2;MLEAF=1.00;MQ=54.33;MQ0=1;QD=22.14;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,240:240:99:5341,373,0
CP000253.1 1459970 . C A 1437.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.008;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9777;MLEAC=1;MLEAF=0.500;MQ=54.33;MQ0=1;MQRankSum=-0.488;QD=5.99;ReadPosRankSum=1.638;SOR=0.717 GT:AD:DP:GQ:PL 0/1:157,83:240:99:1466,0,2993
CP000253.1 1459998 . T C 2930.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.656;DP=230;Dels=0.00;ExcessHet=3.0103;FS=1.684;HaplotypeScore=30.7225;MLEAC=1;MLEAF=0.500;MQ=54.38;MQ0=1;MQRankSum=1.101;QD=12.85;ReadPosRankSum=-0.471;SOR=0.751 GT:AD:DP:GQ:PL 0/1:82,146:230:99:2959,0,1436
CP000253.1 1460007 . T G 1421.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.770;DP=225;Dels=0.00;ExcessHet=3.0103;FS=1.070;HaplotypeScore=37.9565;MLEAC=1;MLEAF=0.500;MQ=54.42;MQ0=1;MQRankSum=-1.056;QD=6.35;ReadPosRankSum=-0.602;SOR=0.600 GT:AD:DP:GQ:PL 0/1:142,82:225:99:1450,0,2816
CP000253.1 1460013 . T G 2705.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-4.644;DP=220;Dels=0.00;ExcessHet=3.0103;FS=1.708;HaplotypeScore=37.8580;MLEAC=1;MLEAF=0.500;MQ=54.54;MQ0=1;MQRankSum=1.051;QD=12.41;ReadPosRankSum=0.952;SOR=0.819 GT:AD:DP:GQ:PL 0/1:79,139:220:99:2734,0,1423
CP000253.1 1460031 . A T 4599.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.771;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4252;MLEAC=2;MLEAF=1.00;MQ=55.44;MQ0=1;MQRankSum=-0.599;QD=23.59;ReadPosRankSum=1.500;SOR=0.338 GT:AD:DP:GQ:PL 1/1:1,194:197:99:4628,328,0
CP000253.1 1460046 . T C 1231.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.280;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3457;MLEAC=1;MLEAF=0.500;MQ=55.34;MQ0=1;MQRankSum=-2.079;QD=6.81;ReadPosRankSum=-2.354;SOR=0.684 GT:AD:DP:GQ:PL 0/1:117,64:181:99:1260,0,2640
CP000253.1 1460049 . A T 1343.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.380;DP=179;Dels=0.00;ExcessHet=3.0103;FS=1.943;HaplotypeScore=21.6690;MLEAC=1;MLEAF=0.500;MQ=55.33;MQ0=1;MQRankSum=-1.498;QD=7.59;ReadPosRankSum=-2.955;SOR=0.550 GT:AD:DP:GQ:PL 0/1:108,69:179:99:1372,0,2356
CP000253.1 1460055 . T C 2409.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.499;DP=173;Dels=0.00;ExcessHet=3.0103;FS=1.254;HaplotypeScore=17.1742;MLEAC=1;MLEAF=0.500;MQ=55.19;MQ0=1;MQRankSum=1.192;QD=14.01;ReadPosRankSum=2.624;SOR=0.820 GT:AD:DP:GQ:PL 0/1:67,105:173:99:2438,0,1348
CP000253.1 1460061 . T A 1236.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.720;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9740;MLEAC=1;MLEAF=0.500;MQ=55.07;MQ0=1;MQRankSum=-0.180;QD=7.68;ReadPosRankSum=-3.346;SOR=0.515 GT:AD:DP:GQ:PL 0/1:98,63:161:99:1265,0,2310
CP000253.1 1460102 . G T 24.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.303;DP=43;Dels=0.00;ExcessHet=3.0103;FS=1.841;HaplotypeScore=5.9652;MLEAC=1;MLEAF=0.500;MQ=55.71;MQ0=0;MQRankSum=1.355;QD=0.58;ReadPosRankSum=-1.001;SOR=0.273 GT:AD:DP:GQ:PL 0/1:37,6:43:53:53,0,904
CP000253.1 1460112 . C T 740.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=53.27;MQ0=0;QD=26.46;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,28:28:57:769,57,0
CP000253.1 1460121 . A T 491.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.40;MQ0=0;QD=25.88;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,19:19:39:520,39,0
CP000253.1 1460123 . A G 309.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.725;DP=17;Dels=0.00;ExcessHet=3.0103;FS=6.597;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=51.43;MQ0=0;MQRankSum=-1.711;QD=18.22;ReadPosRankSum=0.287;SOR=2.833 GT:AD:DP:GQ:PL 0/1:4,13:17:53:338,0,53
CP000253.1 1460129 . C T 163.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.057;DP=11;Dels=0.00;ExcessHet=3.0103;FS=8.751;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=46.09;MQ0=0;MQRankSum=-2.965;QD=14.89;ReadPosRankSum=2.965;SOR=4.174 GT:AD:DP:GQ:PL 0/1:4,7:11:65:192,0,65
CP000253.1 1460131 . T C 163.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.718;DP=11;Dels=0.00;ExcessHet=3.0103;FS=8.751;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=46.09;MQ0=0;MQRankSum=-2.965;QD=14.89;ReadPosRankSum=2.000;SOR=4.174 GT:AD:DP:GQ:PL 0/1:4,7:11:65:192,0,65
CP000253.1 1460138 . G A 163.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.301;DP=11;Dels=0.00;ExcessHet=3.0103;FS=8.751;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=46.09;MQ0=0;MQRankSum=-2.965;QD=14.89;ReadPosRankSum=-1.616;SOR=4.174 GT:AD:DP:GQ:PL 0/1:4,7:11:65:192,0,65
CP000253.1 1460143 . T G 160.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.473;DP=11;Dels=0.00;ExcessHet=3.0103;FS=8.751;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=46.09;MQ0=0;MQRankSum=-2.965;QD=14.62;ReadPosRankSum=-2.000;SOR=4.174 GT:AD:DP:GQ:PL 0/1:4,7:11:65:189,0,65
CP000253.1 1460153 . T C 204.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=46.28;MQ0=0;QD=22.76;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:18:233,18,0
CP000253.1 1460169 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1460183 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1460185 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1460189 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1460266 . G T 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 1460271 . T C 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 1460285 . G A 218.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=24.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:247,18,0
CP000253.1 1460317 . T A 348.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.63;MQ0=0;QD=26.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:377,27,0
CP000253.1 1460318 . A G 282.98 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.571;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.63;MQ0=0;MQRankSum=2.762;QD=21.77;ReadPosRankSum=2.122;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,12:13:13:311,0,13
CP000253.1 1460321 . G A 325.77 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.63;MQ0=0;QD=27.15;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:13:24:341,24,0
CP000253.1 1460339 . A G 391.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.89;MQ0=0;QD=24.49;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:420,30,0
CP000253.1 1460351 . T A 322.18 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.466;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.89;MQ0=0;MQRankSum=3.017;QD=20.14;ReadPosRankSum=1.195;SOR=0.275 GT:AD:DP:GQ:PL 0/1:1,15:16:10:350,0,10
CP000253.1 1460532 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1460533 . C T 276.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:305,21,0
CP000253.1 1460537 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1460565 . A T 316.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:345,24,0
CP000253.1 1460571 . T A 307.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:336,24,0
CP000253.1 1460572 . G C 257.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.338;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=12.89;ReadPosRankSum=3.727;SOR=0.608 GT:AD:DP:GQ:PL 0/1:7,13:20:99:286,0,163
CP000253.1 1460586 . G A 270.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.538;DP=21;Dels=0.00;ExcessHet=3.0103;FS=1.719;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=12.89;ReadPosRankSum=2.289;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,13:21:99:299,0,200
CP000253.1 1460588 . T C 273.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.049;DP=21;Dels=0.00;ExcessHet=3.0103;FS=1.719;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=13.04;ReadPosRankSum=2.177;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,13:21:99:302,0,203
CP000253.1 1460591 . G A 227.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.313;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=10.85;ReadPosRankSum=2.177;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,13:21:99:256,0,190
CP000253.1 1460616 . T C 268.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.446;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3191;MLEAC=1;MLEAF=0.500;MQ=58.59;MQ0=0;MQRankSum=-1.027;QD=12.22;ReadPosRankSum=-1.007;SOR=0.976 GT:AD:DP:GQ:PL 0/1:8,14:22:99:297,0,206
CP000253.1 1460625 . C T 512.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=58.59;MQ0=0;QD=23.31;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:541,39,0
CP000253.1 1460634 . A C 170.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.607;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=58.28;MQ0=0;MQRankSum=1.385;QD=9.49;ReadPosRankSum=1.420;SOR=0.412 GT:AD:DP:GQ:PL 0/1:10,8:18:99:199,0,214
CP000253.1 1460643 . T A 469.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=58.28;MQ0=0;QD=26.10;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:36:498,36,0
CP000253.1 1460649 . T C 198.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.861;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=58.28;MQ0=0;MQRankSum=-1.222;QD=11.04;ReadPosRankSum=-1.329;SOR=1.085 GT:AD:DP:GQ:PL 0/1:8,10:18:99:227,0,170
CP000253.1 1460664 . T A 427.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=58.28;MQ0=0;QD=23.76;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:456,33,0
CP000253.1 1460666 . T G 419.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.777;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=58.28;MQ0=0;MQRankSum=-0.177;QD=23.32;ReadPosRankSum=1.170;SOR=0.761 GT:AD:DP:GQ:PL 1/1:1,17:18:33:448,33,0
CP000253.1 1460679 . A G 110.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.334;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3543;MLEAC=1;MLEAF=0.500;MQ=58.52;MQ0=0;MQRankSum=-1.904;QD=5.54;ReadPosRankSum=0.000;SOR=0.845 GT:AD:DP:GQ:PL 0/1:13,7:21:99:139,0,296
CP000253.1 1460697 . A G 109.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.280;DP=19;Dels=0.00;ExcessHet=3.0103;FS=1.952;HaplotypeScore=3.4090;MLEAC=1;MLEAF=0.500;MQ=58.37;MQ0=0;MQRankSum=-1.976;QD=6.10;ReadPosRankSum=1.833;SOR=1.329 GT:AD:DP:GQ:PL 0/1:12,6:19:99:138,0,260
CP000253.1 1460706 . A G 107.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.105;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-1.888;QD=6.34;ReadPosRankSum=2.068;SOR=1.112 GT:AD:DP:GQ:PL 0/1:11,6:17:99:136,0,258
CP000253.1 1460721 . C T 111.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.623;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-1.888;QD=6.57;ReadPosRankSum=1.565;SOR=1.112 GT:AD:DP:GQ:PL 0/1:11,6:17:99:140,0,213
CP000253.1 1460724 . G A 107.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.369;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-1.888;QD=6.34;ReadPosRankSum=0.958;SOR=1.112 GT:AD:DP:GQ:PL 0/1:11,6:17:99:136,0,236
CP000253.1 1460733 . C T 107.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.105;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6689;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-1.888;QD=6.34;ReadPosRankSum=0.656;SOR=1.112 GT:AD:DP:GQ:PL 0/1:11,6:17:99:136,0,253
CP000253.1 1460748 . T C 95.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.398;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5630;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-1.888;QD=5.63;ReadPosRankSum=0.857;SOR=1.112 GT:AD:DP:GQ:PL 0/1:11,6:17:99:124,0,263
CP000253.1 1460754 . A T 108.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.155;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-1.888;QD=6.40;ReadPosRankSum=0.655;SOR=1.112 GT:AD:DP:GQ:PL 0/1:11,6:17:99:137,0,267
CP000253.1 1460760 . A G 106.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.417;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=58.17;MQ0=0;MQRankSum=-1.888;QD=6.28;ReadPosRankSum=0.353;SOR=1.112 GT:AD:DP:GQ:PL 0/1:11,6:17:99:135,0,265
CP000253.1 1460777 . G T 312.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.60;MQ0=0;MQRankSum=-0.213;QD=24.06;ReadPosRankSum=0.941;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,12:13:24:341,24,0
CP000253.1 1460793 . T G 39.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.769;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=1;MLEAF=0.500;MQ=57.60;MQ0=0;MQRankSum=-1.769;QD=3.06;ReadPosRankSum=-0.522;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,4:13:68:68,0,190
CP000253.1 1460796 . A G 36.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.908;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=1;MLEAF=0.500;MQ=57.60;MQ0=0;MQRankSum=-1.769;QD=2.83;ReadPosRankSum=-0.748;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,4:13:65:65,0,204
CP000253.1 1460808 . A G 30.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.140;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5082;MLEAC=1;MLEAF=0.500;MQ=58.06;MQ0=0;MQRankSum=-2.430;QD=1.92;ReadPosRankSum=-0.061;SOR=0.446 GT:AD:DP:GQ:PL 0/1:12,4:16:59:59,0,312
CP000253.1 1460898 . A G 144.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.573;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7983;MLEAC=1;MLEAF=0.500;MQ=56.71;MQ0=2;MQRankSum=-7.427;QD=1.56;ReadPosRankSum=-2.269;SOR=0.512 GT:AD:DP:GQ:PL 0/1:77,16:93:99:173,0,2056
CP000253.1 1461097 . A G 5199.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.717;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.7370;MLEAC=2;MLEAF=1.00;MQ=56.32;MQ0=2;MQRankSum=1.242;QD=21.67;ReadPosRankSum=-0.975;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,239:242:99:5228,336,0
CP000253.1 1461132 . A G 5028.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9251;MLEAC=2;MLEAF=1.00;MQ=56.46;MQ0=2;QD=21.86;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,230:232:99:5057,352,0
CP000253.1 1461195 . T C 99.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=50.71;MQ0=2;QD=14.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:2,5:7:9:127,9,0
CP000253.1 1461728 . T C 78.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.26;MQ0=0;QD=15.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:106,9,0
CP000253.1 1461735 . G A 77.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.26;MQ0=0;QD=15.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:105,9,0
CP000253.1 1461736 . A C 83.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.26;MQ0=0;QD=16.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:111,9,0
CP000253.1 1461737 . C T 83.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.26;MQ0=0;QD=16.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:111,9,0
CP000253.1 1461744 . C T 83.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.26;MQ0=0;QD=16.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:111,9,0
CP000253.1 1461747 . C T 83.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.26;MQ0=0;QD=16.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:111,9,0
CP000253.1 1461753 . T A 113.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.70;MQ0=0;QD=18.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:141,12,0
CP000253.1 1461759 . T C 123.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.70;MQ0=0;QD=20.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:151,12,0
CP000253.1 1461765 . T A 122.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.70;MQ0=0;QD=20.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:150,12,0
CP000253.1 1461771 . G T 127.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=48.00;MQ0=0;QD=18.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:155,12,0
CP000253.1 1461791 . C T 127.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.72;MQ0=0;QD=21.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:155,12,0
CP000253.1 1461798 . A T 123.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.72;MQ0=0;QD=20.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:151,12,0
CP000253.1 1461804 . G T 127.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.72;MQ0=0;QD=21.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:155,12,0
CP000253.1 1461822 . G A 171.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=53.91;MQ0=0;QD=21.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:200,15,0
CP000253.1 1461837 . T A 36.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.628;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=56.60;MQ0=0;MQRankSum=1.044;QD=2.63;ReadPosRankSum=-2.537;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,4:14:65:65,0,221
CP000253.1 1461840 . T C 192.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.530;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=1;MLEAF=0.500;MQ=56.60;MQ0=0;MQRankSum=-0.812;QD=13.77;ReadPosRankSum=2.682;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,10:14:65:221,0,65
CP000253.1 1461842 . T C 292.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=56.60;MQ0=0;QD=20.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:321,24,0
CP000253.1 1461855 . G A 517.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.910;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=55.43;MQ0=1;MQRankSum=0.308;QD=12.33;ReadPosRankSum=-2.548;SOR=0.650 GT:AD:DP:GQ:PL 0/1:14,28:42:99:546,0,294
CP000253.1 1461900 . G A 1130.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=52.78;MQ0=1;QD=22.17;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,51:52:81:1159,81,0
CP000253.1 1461927 . C G 509.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.511;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6901;MLEAC=1;MLEAF=0.500;MQ=52.46;MQ0=1;MQRankSum=0.227;QD=10.40;ReadPosRankSum=0.982;SOR=0.495 GT:AD:DP:GQ:PL 0/1:19,30:49:99:538,0,376
CP000253.1 1461933 . T A 470.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.246;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5842;MLEAC=1;MLEAF=0.500;MQ=52.46;MQ0=1;MQRankSum=-0.098;QD=9.81;ReadPosRankSum=1.531;SOR=0.581 GT:AD:DP:GQ:PL 0/1:21,27:49:99:499,0,429
CP000253.1 1461942 . A G 1006.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5230;MLEAC=2;MLEAF=1.00;MQ=52.11;MQ0=1;QD=21.89;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,46:47:72:1035,72,0
CP000253.1 1461957 . C T 283.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.476;DP=44;Dels=0.00;ExcessHet=3.0103;FS=1.267;HaplotypeScore=4.3063;MLEAC=1;MLEAF=0.500;MQ=52.10;MQ0=1;MQRankSum=-0.084;QD=6.45;ReadPosRankSum=-0.884;SOR=1.148 GT:AD:DP:GQ:PL 0/1:28,16:44:99:312,0,510
CP000253.1 1461972 . A G 277.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.359;DP=44;Dels=0.00;ExcessHet=3.0103;FS=1.279;HaplotypeScore=1.7333;MLEAC=1;MLEAF=0.500;MQ=50.50;MQ0=3;MQRankSum=0.088;QD=6.31;ReadPosRankSum=-1.372;SOR=1.141 GT:AD:DP:GQ:PL 0/1:28,16:44:99:306,0,473
CP000253.1 1461994 . A T 347.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.238;DP=36;Dels=0.00;ExcessHet=3.0103;FS=1.485;HaplotypeScore=2.6548;MLEAC=1;MLEAF=0.500;MQ=51.02;MQ0=3;MQRankSum=0.148;QD=9.94;ReadPosRankSum=1.560;SOR=0.503 GT:AD:DP:GQ:PL 0/1:13,22:36:99:376,0,247
CP000253.1 1462005 . G A 146.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.288;DP=28;Dels=0.00;ExcessHet=3.0103;FS=1.697;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=48.15;MQ0=3;MQRankSum=-0.770;QD=5.24;ReadPosRankSum=-0.540;SOR=1.402 GT:AD:DP:GQ:PL 0/1:19,9:28:99:175,0,315
CP000253.1 1462008 . T G 394.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.102;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=44.37;MQ0=3;MQRankSum=1.753;QD=17.94;ReadPosRankSum=-0.735;SOR=0.317 GT:AD:DP:GQ:PL 1/1:1,21:22:30:423,30,0
CP000253.1 1462010 . T C 364.78 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=44.37;MQ0=3;QD=16.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,22:22:27:393,27,0
CP000253.1 1462011 . T G 392.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=44.37;MQ0=3;QD=17.85;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,22:22:30:421,30,0
CP000253.1 1462029 . G C,T 355.77 . AC=1,1;AF=0.500,0.500;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6401;MLEAC=1,1;MLEAF=0.500,0.500;MQ=41.92;MQ0=3;QD=16.94;SOR=0.914 GT:AD:DP:GQ:PL 1/2:0,15,6:21:99:384,141,123,244,0,232
CP000253.1 1462047 . A T 139.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;DP=22;Dels=0.00;ExcessHet=3.0103;FS=1.871;HaplotypeScore=0.7887;MLEAC=1;MLEAF=0.500;MQ=41.59;MQ0=3;MQRankSum=-1.906;QD=6.35;ReadPosRankSum=-0.540;SOR=1.093 GT:AD:DP:GQ:PL 0/1:14,8:22:99:168,0,188
CP000253.1 1462050 . G A 163.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.164;DP=20;Dels=0.00;ExcessHet=3.0103;FS=1.957;HaplotypeScore=0.7887;MLEAC=1;MLEAF=0.500;MQ=39.28;MQ0=3;MQRankSum=-1.581;QD=8.19;ReadPosRankSum=-0.468;SOR=1.080 GT:AD:DP:GQ:PL 0/1:12,8:20:99:192,0,182
CP000253.1 1462053 . A G 382.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=39.28;MQ0=3;QD=19.14;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,20:20:30:411,30,0
CP000253.1 1462077 . T A 517.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=45.47;MQ0=3;QD=19.91;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,26:26:42:546,42,0
CP000253.1 1462083 . G A 447.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=44.48;MQ0=3;QD=19.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,23:24:36:476,36,0
CP000253.1 1462104 . T C 414.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=47.28;MQ0=1;QD=21.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,19:19:33:443,33,0
CP000253.1 1462109 . C A 223.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.102;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3196;MLEAC=1;MLEAF=0.500;MQ=47.28;MQ0=1;MQRankSum=1.704;QD=11.78;ReadPosRankSum=2.678;SOR=0.625 GT:AD:DP:GQ:PL 0/1:6,13:19:91:252,0,91
CP000253.1 1462118 . C T 385.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.1869;MLEAC=2;MLEAF=1.00;MQ=47.28;MQ0=1;QD=20.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,19:19:30:414,30,0
CP000253.1 1462120 . A G 371.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=47.28;MQ0=1;QD=19.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,19:19:30:400,30,0
CP000253.1 1462137 . T C 16.86 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.047;DP=19;Dels=0.00;ExcessHet=3.0103;FS=3.245;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=49.72;MQ0=0;MQRankSum=-1.382;QD=0.89;ReadPosRankSum=-1.669;SOR=2.283 GT:AD:DP:GQ:PL 0/1:17,2:19:45:45,0,370
CP000253.1 1462152 . A T 371.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=51.56;MQ0=0;QD=23.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:17:30:394,30,0
CP000253.1 1462185 . C T 21.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.956;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=54.16;MQ0=0;MQRankSum=-0.587;QD=1.04;ReadPosRankSum=-1.347;SOR=0.593 GT:AD:DP:GQ:PL 0/1:17,4:21:50:50,0,404
CP000253.1 1462200 . T A 471.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=55.39;MQ0=0;QD=23.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:500,36,0
CP000253.1 1462203 . A G 500.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=55.39;MQ0=0;QD=25.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:39:529,39,0
CP000253.1 1462206 . A G 450.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.39;MQ0=0;QD=22.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:479,36,0
CP000253.1 1462239 . C T 551.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8498;MLEAC=2;MLEAF=1.00;MQ=56.64;MQ0=0;QD=25.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:580,42,0
CP000253.1 1462241 . G T 104.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.860;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7861;MLEAC=1;MLEAF=0.500;MQ=56.64;MQ0=0;MQRankSum=-1.153;QD=4.76;ReadPosRankSum=-1.343;SOR=0.856 GT:AD:DP:GQ:PL 0/1:15,7:22:99:133,0,364
CP000253.1 1462244 . A T 545.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=56.64;MQ0=0;QD=24.81;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:574,42,0
CP000253.1 1462245 . T C 551.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=56.64;MQ0=0;QD=25.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:580,42,0
CP000253.1 1462266 . A T 357.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.158;DP=30;Dels=0.00;ExcessHet=3.0103;FS=1.509;HaplotypeScore=5.0990;MLEAC=1;MLEAF=0.500;MQ=57.56;MQ0=0;MQRankSum=0.994;QD=11.93;ReadPosRankSum=0.043;SOR=0.921 GT:AD:DP:GQ:PL 0/1:11,19:30:99:386,0,213
CP000253.1 1462267 . G A 186.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.024;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3650;MLEAC=1;MLEAF=0.500;MQ=57.56;MQ0=0;MQRankSum=-0.854;QD=6.44;ReadPosRankSum=-0.136;SOR=0.708 GT:AD:DP:GQ:PL 0/1:18,11:30:99:215,0,360
CP000253.1 1462284 . T C 184.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.960;DP=28;Dels=0.00;ExcessHet=3.0103;FS=1.549;HaplotypeScore=1.7262;MLEAC=1;MLEAF=0.500;MQ=57.38;MQ0=0;MQRankSum=-0.775;QD=6.60;ReadPosRankSum=0.997;SOR=0.637 GT:AD:DP:GQ:PL 0/1:17,11:28:99:213,0,392
CP000253.1 1462289 . A T 184.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.809;DP=28;Dels=0.00;ExcessHet=3.0103;FS=1.549;HaplotypeScore=2.5929;MLEAC=1;MLEAF=0.500;MQ=57.38;MQ0=0;MQRankSum=-0.775;QD=6.60;ReadPosRankSum=0.949;SOR=0.637 GT:AD:DP:GQ:PL 0/1:17,11:28:99:213,0,404
CP000253.1 1462328 . G A 294.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3633;MLEAC=2;MLEAF=1.00;MQ=58.41;MQ0=0;QD=22.68;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:323,24,0
CP000253.1 1462343 . T A 255.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6609;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:11:21:284,21,0
CP000253.1 1462370 . A C 438.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:467,33,0
CP000253.1 1462527 . C T 1644.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1673,114,0
CP000253.1 1462560 . G A 1383.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:96:1412,96,0
CP000253.1 1493893 . G A 99.28 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=19.05;MQ0=12;QD=5.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:9:127,9,0
CP000253.1 1494673 . A G 98.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.92;MQ0=0;QD=19.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:126,9,0
CP000253.1 1494674 . C T 130.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.92;MQ0=0;QD=26.01;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:158,12,0
CP000253.1 1494698 . A G 510.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.86;MQ0=0;QD=31.92;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:42:539,42,0
CP000253.1 1494719 . G A 850.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=54.80;MQ0=0;QD=34.03;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:66:879,66,0
CP000253.1 1494728 . T A 907.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.38;MQ0=0;QD=32.42;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:72:936,72,0
CP000253.1 1494731 . A G 951.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=55.85;MQ0=0;QD=30.70;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:75:980,75,0
CP000253.1 1494752 . G A 1257.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5088;MLEAC=2;MLEAF=1.00;MQ=57.35;MQ0=0;QD=26.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:93:1286,93,0
CP000253.1 1494761 . T C 1466.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.842;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.2019;MLEAC=2;MLEAF=1.00;MQ=57.70;MQ0=0;MQRankSum=-0.326;QD=26.67;ReadPosRankSum=1.387;SOR=0.339 GT:AD:DP:GQ:PL 1/1:1,54:55:99:1495,108,0
CP000253.1 1494773 . T C 1439.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.849;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1536;MLEAC=2;MLEAF=1.00;MQ=57.74;MQ0=0;MQRankSum=-0.326;QD=26.18;ReadPosRankSum=1.734;SOR=0.339 GT:AD:DP:GQ:PL 1/1:1,54:56:99:1468,108,0
CP000253.1 1494776 . G A 1527.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.781;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4196;MLEAC=2;MLEAF=1.00;MQ=57.85;MQ0=0;MQRankSum=-0.314;QD=25.89;ReadPosRankSum=0.794;SOR=0.331 GT:AD:DP:GQ:PL 1/1:1,58:59:99:1556,114,0
CP000253.1 1494853 . T C 2928.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1230;MLEAC=2;MLEAF=1.00;MQ=58.51;MQ0=2;QD=23.62;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,124:125:99:2957,211,0
CP000253.1 1494893 . A G 3069.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3744;MLEAC=2;MLEAF=1.00;MQ=58.76;MQ0=0;QD=23.61;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3098,220,0
CP000253.1 1494894 . T C 3125.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.885;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3744;MLEAC=2;MLEAF=1.00;MQ=58.76;MQ0=0;MQRankSum=-0.260;QD=24.04;ReadPosRankSum=-0.987;SOR=0.553 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3154,223,0
CP000253.1 1494915 . A C 3230.05 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2646;MLEAC=2;MLEAF=1.00;MQ=58.47;MQ0=0;QD=23.75;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,136:138:99:3258,232,0
CP000253.1 1494924 . T C 3321.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8920;MLEAC=2;MLEAF=1.00;MQ=58.47;MQ0=0;QD=24.07;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3350,235,0
CP000253.1 1494926 . C T 3303.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9026;MLEAC=2;MLEAF=1.00;MQ=58.47;MQ0=0;QD=23.94;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3332,235,0
CP000253.1 1494996 . C A 2711.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=58.68;MQ0=0;QD=25.83;SOR=1.064 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2740,193,0
CP000253.1 1495014 . C T 2567.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3963;MLEAC=2;MLEAF=1.00;MQ=58.58;MQ0=0;QD=26.20;SOR=1.122 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2596,184,0
CP000253.1 1495018 . T C 2440.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3857;MLEAC=2;MLEAF=1.00;MQ=58.57;MQ0=0;QD=25.42;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2469,175,0
CP000253.1 1495056 . C T 1357.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=57.56;MQ0=0;QD=24.69;SOR=1.262 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1386,99,0
CP000253.1 1495071 . A G 1095.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=56.62;MQ0=0;QD=27.39;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,40:40:81:1124,81,0
CP000253.1 1495092 . A T 842.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6671;MLEAC=2;MLEAF=1.00;MQ=57.23;MQ0=0;QD=29.06;SOR=1.942 GT:AD:DP:GQ:PL 1/1:0,29:29:63:871,63,0
CP000253.1 1495101 . C T 717.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.10;MQ0=0;QD=28.71;SOR=1.893 GT:AD:DP:GQ:PL 1/1:0,25:25:54:746,54,0
CP000253.1 1495107 . G T 678.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.69;MQ0=0;QD=30.85;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,22:22:54:707,54,0
CP000253.1 1495112 . T G 328.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.30;MQ0=0;QD=29.89;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:27:357,27,0
CP000253.1 1495119 . A G 162.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.96;MQ0=0;QD=27.15;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:191,15,0
CP000253.1 1495129 . T A 91.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.25;MQ0=0;QD=22.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:119,9,0
CP000253.1 1495135 . A T 50.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.40;MQ0=0;QD=16.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:78,6,0
CP000253.1 1496913 . A G 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1496975 . G A 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 1496979 . A T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1496985 . A G 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1497000 . C T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1497006 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1497030 . G T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1497060 . A G 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1502300 . A G 276.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=50.07;MQ0=0;QD=21.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:305,24,0
CP000253.1 1502312 . T C 229.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.90;MQ0=0;QD=19.15;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:258,21,0
CP000253.1 1502324 . T C 237.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=48.88;MQ0=0;QD=21.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:266,21,0
CP000253.1 1502339 . C T 162.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.43;MQ0=0;QD=20.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:191,15,0
CP000253.1 1502342 . C A 137.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.43;MQ0=0;QD=17.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:165,12,0
CP000253.1 1502345 . T C 154.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.43;MQ0=0;QD=19.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:183,15,0
CP000253.1 1502360 . C T 162.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.43;MQ0=0;QD=20.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:191,15,0
CP000253.1 1502369 . C T 118.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.42;MQ0=0;QD=19.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:146,12,0
CP000253.1 1502381 . C T 48.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=29.98;MQ0=0;QD=12.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:76,6,0
CP000253.1 1508594 . G A 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1508617 . T A 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1508621 . T C 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 1508708 . A T 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 1508885 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1508917 . C T 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 1509047 . A G 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1509053 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1509098 . A T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1509141 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1509143 . G C 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1509437 . C T 176.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:205,15,0
CP000253.1 1509481 . T G 222.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:251,18,0
CP000253.1 1509569 . T A 375.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:30:404,30,0
CP000253.1 1509659 . T C 566.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.501;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4490;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.62;ReadPosRankSum=-0.941;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,23:25:42:595,42,0
CP000253.1 1509677 . T C 523.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:552,39,0
CP000253.1 1509764 . T A 678.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:51:707,51,0
CP000253.1 1509797 . A G 1177.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:47:87:1206,87,0
CP000253.1 1509847 . T C 1342.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1371,96,0
CP000253.1 1509870 . T C 1598.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:71:99:1627,114,0
CP000253.1 1510004 . A T 1496.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1525,105,0
CP000253.1 1510006 . T C 1448.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1477,102,0
CP000253.1 1510015 . A G 1263.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.42;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:93:1292,93,0
CP000253.1 1510040 . C T 1372.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:96:1401,96,0
CP000253.1 1510249 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1510274 . G A 176.77 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;QD=25.25;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:9:12:175,12,0
CP000253.1 1510316 . T A 152.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.478;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=59.22;MQ0=0;MQRankSum=-0.722;QD=8.99;ReadPosRankSum=-2.764;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,8:17:99:181,0,190
CP000253.1 1510319 . A G 150.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.981;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=59.22;MQ0=0;MQRankSum=-0.722;QD=8.87;ReadPosRankSum=-2.764;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,8:17:99:179,0,183
CP000253.1 1510322 . A T 119.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.494;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.22;MQ0=0;MQRankSum=-0.722;QD=7.05;ReadPosRankSum=-2.764;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,8:17:99:148,0,177
CP000253.1 1510331 . A T 163.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.111;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.22;MQ0=0;MQRankSum=0.722;QD=9.63;ReadPosRankSum=3.507;SOR=0.892 GT:AD:DP:GQ:PL 0/1:8,9:17:99:192,0,144
CP000253.1 1510349 . A T 126.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.350;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.12;MQ0=0;MQRankSum=0.728;QD=8.45;ReadPosRankSum=3.782;SOR=0.495 GT:AD:DP:GQ:PL 0/1:7,8:15:99:155,0,139
CP000253.1 1510352 . T C 122.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.633;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.12;MQ0=0;MQRankSum=-0.728;QD=8.18;ReadPosRankSum=-3.782;SOR=0.941 GT:AD:DP:GQ:PL 0/1:8,7:15:99:151,0,155
CP000253.1 1510355 . T G 122.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.045;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=59.12;MQ0=0;MQRankSum=-0.728;QD=8.18;ReadPosRankSum=-3.782;SOR=0.941 GT:AD:DP:GQ:PL 0/1:8,7:15:99:151,0,155
CP000253.1 1510358 . C T 119.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.424;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.12;MQ0=0;MQRankSum=-0.728;QD=7.98;ReadPosRankSum=-3.782;SOR=0.941 GT:AD:DP:GQ:PL 0/1:8,7:15:99:148,0,148
CP000253.1 1510360 . G T 126.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.602;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.12;MQ0=0;MQRankSum=0.728;QD=8.45;ReadPosRankSum=3.782;SOR=0.495 GT:AD:DP:GQ:PL 0/1:7,8:15:99:155,0,150
CP000253.1 1510363 . G C 122.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.209;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=59.12;MQ0=0;MQRankSum=-0.728;QD=8.18;ReadPosRankSum=-3.782;SOR=0.941 GT:AD:DP:GQ:PL 0/1:8,7:15:99:151,0,151
CP000253.1 1510466 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1510471 . T G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1510481 . A T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1510490 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1510769 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1510774 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1510779 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=5.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:38,3,0
CP000253.1 1510848 . T A 90.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.12;MQ0=0;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0
CP000253.1 1510849 . C T 90.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.12;MQ0=0;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0
CP000253.1 1510856 . G A 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.12;MQ0=0;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 1510857 . T C 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.12;MQ0=0;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 1510863 . A G 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1510869 . C T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1510872 . T A 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1510887 . A G 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 1510888 . C T 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 1510893 . A T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1510896 . A T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1510897 . G A 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1510899 . G A 96.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=24.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:124,9,0
CP000253.1 1510905 . A G 87.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=21.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:115,9,0
CP000253.1 1510914 . A G 159.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.719;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.99;MQ0=0;MQRankSum=2.200;QD=17.75;ReadPosRankSum=0.812;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,7:9:27:188,0,27
CP000253.1 1510925 . T G 204.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.200;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3660;MLEAC=1;MLEAF=0.500;MQ=55.93;MQ0=0;MQRankSum=-0.549;QD=22.75;ReadPosRankSum=2.200;SOR=1.414 GT:AD:DP:GQ:PL 1/1:2,7:11:15:206,15,0
CP000253.1 1510932 . G A 311.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3660;MLEAC=2;MLEAF=1.00;MQ=56.83;MQ0=0;QD=22.27;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:340,24,0
CP000253.1 1510935 . A G 259.84 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.507;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0867;MLEAC=1;MLEAF=0.500;MQ=57.23;MQ0=0;MQRankSum=2.947;QD=17.32;ReadPosRankSum=-0.429;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,13:16:18:288,0,18
CP000253.1 1511181 . A G 1424.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0263;MLEAC=2;MLEAF=1.00;MQ=45.31;MQ0=8;QD=20.35;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1453,105,0
CP000253.1 1511321 . T C 1877.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8287;MLEAC=2;MLEAF=1.00;MQ=49.94;MQ0=8;QD=19.16;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,98:98:99:1906,132,0
CP000253.1 1511334 . C T 1781.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.394;DP=92;Dels=0.00;ExcessHet=3.0103;FS=2.107;HaplotypeScore=7.7770;MLEAC=2;MLEAF=1.00;MQ=51.04;MQ0=4;MQRankSum=3.868;QD=19.37;ReadPosRankSum=2.570;SOR=0.189 GT:AD:DP:GQ:PL 1/1:5,87:92:69:1810,69,0
CP000253.1 1511349 . G T 1682.96 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.554;DP=91;Dels=0.00;ExcessHet=3.0103;FS=1.702;HaplotypeScore=6.0870;MLEAC=2;MLEAF=1.00;MQ=52.55;MQ0=4;MQRankSum=5.222;QD=18.49;ReadPosRankSum=3.007;SOR=0.302 GT:AD:DP:GQ:PL 1/1:7,84:91:5:1710,5,0
CP000253.1 1511385 . A T 1773.94 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.745;DP=85;Dels=0.00;ExcessHet=3.0103;FS=1.643;HaplotypeScore=6.4061;MLEAC=2;MLEAF=1.00;MQ=55.11;MQ0=0;MQRankSum=5.679;QD=20.87;ReadPosRankSum=-0.024;SOR=0.291 GT:AD:DP:GQ:PL 1/1:7,78:85:14:1802,14,0
CP000253.1 1511400 . T A 2018.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0984;MLEAC=2;MLEAF=1.00;MQ=55.54;MQ0=0;QD=24.32;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2047,144,0
CP000253.1 1511403 . T C 1735.10 . AC=2;AF=1.00;AN=2;BaseQRankSum=-2.072;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1258;MLEAC=2;MLEAF=1.00;MQ=55.60;MQ0=0;MQRankSum=5.852;QD=20.66;ReadPosRankSum=-1.151;SOR=0.333 GT:AD:DP:GQ:PL 1/1:7,77:84:11:1763,11,0
CP000253.1 1511412 . T A 1705.41 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.596;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7461;MLEAC=2;MLEAF=1.00;MQ=55.60;MQ0=0;MQRankSum=5.305;QD=20.30;ReadPosRankSum=-1.916;SOR=0.556 GT:AD:DP:GQ:PL 1/1:8,76:84:8:1733,8,0
CP000253.1 1511413 . T C 1712.41 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.435;DP=84;Dels=0.00;ExcessHet=3.0103;FS=1.587;HaplotypeScore=8.7461;MLEAC=2;MLEAF=1.00;MQ=55.60;MQ0=0;MQRankSum=5.852;QD=20.39;ReadPosRankSum=-1.815;SOR=0.333 GT:AD:DP:GQ:PL 1/1:7,77:84:8:1740,8,0
CP000253.1 1511431 . G A 1706.10 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.900;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3905;MLEAC=2;MLEAF=1.00;MQ=55.65;MQ0=0;MQRankSum=5.935;QD=20.56;ReadPosRankSum=-1.715;SOR=0.382 GT:AD:DP:GQ:PL 1/1:7,76:85:11:1734,11,0
CP000253.1 1511514 . A T 337.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.15;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:27:366,27,0
CP000253.1 1511583 . G A 166.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:195,15,0
CP000253.1 1511633 . T C 304.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:333,24,0
CP000253.1 1511643 . A T 294.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:323,24,0
CP000253.1 1511651 . T C 300.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:329,24,0
CP000253.1 1511653 . C T 304.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:333,24,0
CP000253.1 1511654 . C T 299.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:328,24,0
CP000253.1 1511656 . C G 252.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:281,21,0
CP000253.1 1511715 . G T 356.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:385,27,0
CP000253.1 1511731 . A G 474.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.93;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:18:36:503,36,0
CP000253.1 1511776 . C T 795.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:57:824,57,0
CP000253.1 1511797 . T A 1053.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1082,75,0
CP000253.1 1511872 . T C 1396.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1425,99,0
CP000253.1 1511938 . A G 1864.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7256;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1893,135,0
CP000253.1 1512250 . A T 3283.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.963;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9039;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.29;ReadPosRankSum=1.167;SOR=0.259 GT:AD:DP:GQ:PL 1/1:1,140:142:99:3312,229,0
CP000253.1 1512282 . T C 3245.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0011;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3274,232,0
CP000253.1 1512286 . A G 3111.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=1.064 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3140,223,0
CP000253.1 1512352 . A T 3233.06 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4343;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3264,232,0
CP000253.1 1512364 . C A 3024.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3053,220,0
CP000253.1 1512370 . A T 2504.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2533,181,0
CP000253.1 1512487 . G A 3056.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3085,214,0
CP000253.1 1512538 . G A 2717.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6232;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2746,190,0
CP000253.1 1512547 . A C 2629.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2658,184,0
CP000253.1 1512574 . T A 2388.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2417,169,0
CP000253.1 1512955 . G A 1559.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1083;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1588,111,0
CP000253.1 1513090 . G A 1738.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1767,123,0
CP000253.1 1513547 . A G 1322.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1351,93,0
CP000253.1 1514609 . C G 947.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:69:976,69,0
CP000253.1 1514633 . A G 682.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.02;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:32:51:711,51,0
CP000253.1 1514648 . C T 551.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4011;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.59;ReadPosRankSum=1.737;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,19:20:42:580,42,0
CP000253.1 1514651 . A T 510.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4011;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:39:539,39,0
CP000253.1 1514660 . T C 473.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:502,36,0
CP000253.1 1514717 . G A 375.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:404,30,0
CP000253.1 1515436 . A G 1754.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1783,123,0
CP000253.1 1516681 . G A 602.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:45:631,45,0
CP000253.1 1516849 . C G 2577.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2590;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=24.09;SOR=1.008 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2606,181,0
CP000253.1 1516981 . G A 2843.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4940;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2872,199,0
CP000253.1 1516988 . T G 2683.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9302;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2712,190,0
CP000253.1 1517197 . A G 3221.92 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3250,232,0
CP000253.1 1517536 . C T 4359.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4388,304,0
CP000253.1 1517956 . C T 3726.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0766;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3755,265,0
CP000253.1 1518235 . A G 3240.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3269,229,0
CP000253.1 1518435 . T C 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 1518654 . C A 685.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.695;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.12;ReadPosRankSum=0.560;SOR=0.643 GT:AD:DP:GQ:PL 1/1:1,30:31:51:714,51,0
CP000253.1 1518663 . T A 711.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:740,51,0
CP000253.1 1518762 . T C 3052.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3081,211,0
CP000253.1 1518765 . T A 3068.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2844;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3097,214,0
CP000253.1 1518782 . C T 3435.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0391;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3464,235,0
CP000253.1 1518881 . C A 3354.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9531;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3383,232,0
CP000253.1 1519136 . T A 1636.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1665,117,0
CP000253.1 1519140 . T G 1681.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1710,120,0
CP000253.1 1519253 . T C 4082.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7818;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,168:171:99:4111,289,0
CP000253.1 1519328 . T C 4535.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,204:204:99:4564,313,0
CP000253.1 1519950 . A G 748.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:54:777,54,0
CP000253.1 1521116 . C T 2462.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2491,169,0
CP000253.1 1521295 . A G 255.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:284,21,0
CP000253.1 1521296 . A T 253.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:282,21,0
CP000253.1 1521299 . T C 261.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:290,21,0
CP000253.1 1521301 . A G 248.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:277,21,0
CP000253.1 1521302 . C T 268.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:297,21,0
CP000253.1 1521592 . A T 1697.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.828;DP=67;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3581;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.12;ReadPosRankSum=0.987;SOR=1.078 GT:AD:DP:GQ:PL 1/1:1,64:65:99:1726,123,0
CP000253.1 1521610 . A G 1771.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1800,126,0
CP000253.1 1521652 . T C 2419.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.190 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2448,175,0
CP000253.1 1521778 . T A 3345.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3158;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3374,238,0
CP000253.1 1521877 . A G 3625.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,146:148:99:3654,256,0
CP000253.1 1521949 . T C 3800.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3829,271,0
CP000253.1 1522162 . C T 2375.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2404,169,0
CP000253.1 1522196 . A G 1821.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,74:76:99:1850,129,0
CP000253.1 1522243 . G A 300.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:24:329,24,0
CP000253.1 1522246 . A T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1522247 . G A 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1522257 . T G 191.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:220,15,0
CP000253.1 1522276 . T A 307.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:336,24,0
CP000253.1 1522282 . G A 356.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:385,27,0
CP000253.1 1522283 . T C 354.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:383,27,0
CP000253.1 1522320 . T C 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1522382 . G A 312.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:341,24,0
CP000253.1 1523083 . A G 1426.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.863;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.78;ReadPosRankSum=-1.502;SOR=0.334 GT:AD:DP:GQ:PL 1/1:1,59:60:99:1455,102,0
CP000253.1 1523384 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1523465 . A T 356.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:385,27,0
CP000253.1 1523479 . T A 400.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:17:30:429,30,0
CP000253.1 1523487 . A G 447.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:476,33,0
CP000253.1 1523574 . A T 1461.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1490,102,0
CP000253.1 1524330 . T C 3932.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.784;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.69;ReadPosRankSum=0.709;SOR=0.407 GT:AD:DP:GQ:PL 1/1:3,163:167:99:3961,238,0
CP000253.1 1524660 . G A 760.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.26;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,26:26:57:789,57,0
CP000253.1 1524753 . A T 2346.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2375,166,0
CP000253.1 1524762 . C T 2530.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2559,178,0
CP000253.1 1524774 . C T 2779.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2808,196,0
CP000253.1 1524831 . T C 3762.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,159:160:99:3791,262,0
CP000253.1 1525570 . C T 2346.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.698;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.24;ReadPosRankSum=1.149;SOR=0.351 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2375,169,0
CP000253.1 1525642 . T C 2887.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6544;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.50;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2916,211,0
CP000253.1 1525900 . T C 5896.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,246:247:99:5925,415,0
CP000253.1 1526134 . A T 3097.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=119.4060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3126,220,0
CP000253.1 1526545 . G A 1779.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.122;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5937;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.42;ReadPosRankSum=-2.141;SOR=0.992 GT:AD:DP:GQ:PL 1/1:2,74:76:88:1808,88,0
CP000253.1 1526706 . A T 2852.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6833;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,127:127:99:2881,196,0
CP000253.1 1527096 . A G 2517.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.865;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7915;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.98;ReadPosRankSum=-0.248;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,104:106:99:2546,178,0
CP000253.1 1527333 . C T 3009.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.876;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.89;ReadPosRankSum=0.632;SOR=0.271 GT:AD:DP:GQ:PL 1/1:1,125:126:99:3038,211,0
CP000253.1 1527429 . T G 2272.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2301,163,0
CP000253.1 1527483 . G A 2206.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=1.065 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2235,157,0
CP000253.1 1527519 . G A 1722.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1751,123,0
CP000253.1 1527599 . C T 1602.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1631,114,0
CP000253.1 1527614 . G A 1513.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1542,108,0
CP000253.1 1527651 . C T 1453.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1482,102,0
CP000253.1 1527657 . G A 1444.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1473,102,0
CP000253.1 1527732 . G T 1554.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1583,111,0
CP000253.1 1527974 . C A 887.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1540;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.65;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:63:916,63,0
CP000253.1 1528023 . T A 786.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.85;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:57:815,57,0
CP000253.1 1528209 . A T 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 1528253 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1528254 . A C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1528256 . T G 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1528257 . T A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1528261 . T A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1528262 . T A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1528266 . A T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1528269 . A T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1528272 . T A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1528274 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1528410 . A G 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 1528494 . C T 457.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.81;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:33:486,33,0
CP000253.1 1528515 . G A 491.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.35;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:520,36,0
CP000253.1 1528820 . G T 2010.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2039,138,0
CP000253.1 1528923 . C T 1589.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1618,111,0
CP000253.1 1528941 . A T 1498.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.160 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1527,108,0
CP000253.1 1528944 . G A 1558.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,61:62:99:1587,111,0
CP000253.1 1528952 . C A 817.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.020;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.78;ReadPosRankSum=-1.528;SOR=0.829 GT:AD:DP:GQ:PL 1/1:1,32:33:60:846,60,0
CP000253.1 1528962 . C T 534.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:563,39,0
CP000253.1 1528965 . A T 395.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:424,30,0
CP000253.1 1529110 . G A 225.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:254,18,0
CP000253.1 1529119 . G T 264.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:293,21,0
CP000253.1 1529128 . A G 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 1529151 . T C 280.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:309,21,0
CP000253.1 1529257 . T C 968.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:44:69:997,69,0
CP000253.1 1529260 . C T 992.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1021,69,0
CP000253.1 1529263 . G A 979.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1008,69,0
CP000253.1 1529419 . G A 983.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:69:1012,69,0
CP000253.1 1529736 . A G 1544.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6908;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1573,108,0
CP000253.1 1529790 . A T 1748.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1777,123,0
CP000253.1 1529991 . G T 2033.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.051;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5139;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.80;ReadPosRankSum=1.733;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,81:82:99:2062,144,0
CP000253.1 1530282 . G A 1320.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8066;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1349,93,0
CP000253.1 1530462 . G A 1542.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1571,111,0
CP000253.1 1530522 . G A 1949.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1978,138,0
CP000253.1 1530531 . G A 2121.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.815;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.39;ReadPosRankSum=-1.355;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,86:87:99:2150,117,0
CP000253.1 1530564 . A T 2699.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6448;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2728,190,0
CP000253.1 1530606 . T A 2785.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2814,196,0
CP000253.1 1530840 . C T 1640.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1669,117,0
CP000253.1 1530846 . G A 1551.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:62:99:1580,111,0
CP000253.1 1531162 . A T 2877.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2906,205,0
CP000253.1 1531442 . A T 3719.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,143:145:99:3748,265,0
CP000253.1 1531657 . C A 4115.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5445;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.08;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,152:154:99:4144,298,0
CP000253.1 1531708 . C T 3582.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.151;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.15;ReadPosRankSum=0.368;SOR=0.973 GT:AD:DP:GQ:PL 1/1:2,135:138:99:3611,227,0
CP000253.1 1531719 . A T 3679.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.523;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0805;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;MQRankSum=11.959;QD=25.91;ReadPosRankSum=1.733;SOR=0.323 GT:AD:DP:GQ:PL 1/1:1,141:143:99:3708,243,0
CP000253.1 1531861 . T C 3961.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.442;DP=164;Dels=0.00;ExcessHet=3.0103;FS=3.302;HaplotypeScore=24.1184;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.46;ReadPosRankSum=1.262;SOR=0.571 GT:AD:DP:GQ:PL 1/1:1,161:164:99:3990,263,0
CP000253.1 1531941 . A C 4091.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6545;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.186 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4120,292,0
CP000253.1 1531950 . C A 4183.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.787;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.05;ReadPosRankSum=-0.788;SOR=0.415 GT:AD:DP:GQ:PL 1/1:1,166:167:99:4212,265,0
CP000253.1 1532251 . A T 1911.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0908;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1940,135,0
CP000253.1 1532315 . T A 1443.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.745;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=-0.625;SOR=0.658 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1472,102,0
CP000253.1 1532384 . T C 596.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.42;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,21:21:45:625,45,0
CP000253.1 1532425 . A T 94.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0
CP000253.1 1532541 . T A 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 1532777 . A G 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 1533085 . C A 1232.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1261,87,0
CP000253.1 1533101 . C T 1140.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1169,81,0
CP000253.1 1533425 . T C 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 1534376 . T A 387.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:30:416,30,0
CP000253.1 1534424 . A T 301.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:24:330,24,0
CP000253.1 1534432 . T A 354.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:383,27,0
CP000253.1 1534448 . A C 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 1534469 . A C 310.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:339,24,0
CP000253.1 1534480 . C A 306.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:335,24,0
CP000253.1 1534547 . A T 264.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:293,21,0
CP000253.1 1534564 . G T 260.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:289,21,0
CP000253.1 1534569 . A C 252.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:281,21,0
CP000253.1 1534623 . C T 257.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:286,21,0
CP000253.1 1534627 . T C 220.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:18:249,18,0
CP000253.1 1534706 . T A 340.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.30;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:369,27,0
CP000253.1 1534727 . A G 368.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:397,27,0
CP000253.1 1534736 . A T 450.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.47;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:479,33,0
CP000253.1 1534754 . A T 535.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:564,39,0
CP000253.1 1534760 . G A 526.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:555,39,0
CP000253.1 1534761 . T C 495.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:524,36,0
CP000253.1 1534763 . A T 536.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:565,39,0
CP000253.1 1534823 . A T 1487.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1516,105,0
CP000253.1 1534835 . T A 1556.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1585,111,0
CP000253.1 1534838 . A G 1578.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1607,111,0
CP000253.1 1534850 . A C 1763.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1792,123,0
CP000253.1 1534889 . T A 2534.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2563,175,0
CP000253.1 1534892 . C T 2483.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2512,172,0
CP000253.1 1534901 . A T 2433.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2462,169,0
CP000253.1 1534904 . G A 2431.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2460,169,0
CP000253.1 1534907 . C T 2490.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2519,172,0
CP000253.1 1534921 . C T 2491.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2520,172,0
CP000253.1 1534946 . C T 2674.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2703,184,0
CP000253.1 1535558 . T A 6175.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,245:246:99:6204,451,0
CP000253.1 1535580 . G A 6563.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.811;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.36;ReadPosRankSum=1.079;SOR=0.380 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6592,476,0
CP000253.1 1535867 . G A 3390.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3260;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=1.125 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3419,244,0
CP000253.1 1536151 . G T 1319.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.067;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6676;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.00;ReadPosRankSum=-1.520;SOR=0.473 GT:AD:DP:GQ:PL 1/1:3,52:55:96:1348,96,0
CP000253.1 1536218 . A G 1710.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0881;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1739,123,0
CP000253.1 1536314 . C A 3167.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3002;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3196,226,0
CP000253.1 1536488 . C T 3723.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5765;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,151:154:99:3752,271,0
CP000253.1 1536769 . T G 4232.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.096;DP=159;Dels=0.00;ExcessHet=3.0103;FS=3.407;HaplotypeScore=22.3316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.62;ReadPosRankSum=0.506;SOR=0.349 GT:AD:DP:GQ:PL 1/1:3,156:159:99:4261,310,0
CP000253.1 1536776 . C T 3959.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1211;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.50;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,144:146:99:3988,286,0
CP000253.1 1536810 . C T 3464.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.50;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,126:128:99:3493,250,0
CP000253.1 1537093 . T A 3896.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.865;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=1.255;SOR=0.674 GT:AD:DP:GQ:PL 1/1:1,155:158:99:3925,274,0
CP000253.1 1537107 . T C 3731.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.901;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3163;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.71;ReadPosRankSum=1.262;SOR=0.714 GT:AD:DP:GQ:PL 1/1:1,150:151:99:3760,265,0
CP000253.1 1538142 . T C 4624.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,200:200:99:4653,325,0
CP000253.1 1538455 . T A 2007.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.830;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.48;ReadPosRankSum=-1.226;SOR=0.355 GT:AD:DP:GQ:PL 1/1:1,81:82:99:2036,144,0
CP000253.1 1538551 . G A 1194.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1223,84,0
CP000253.1 1539250 . T C 1219.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1248,87,0
CP000253.1 1539597 . T C 2718.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0909;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2747,193,0
CP000253.1 1539643 . T C 2755.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8263;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,118:119:99:2784,193,0
CP000253.1 1539688 . T C 2369.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.743;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.79;ReadPosRankSum=0.100;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,103:104:99:2398,166,0
CP000253.1 1539697 . G A 2423.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2452,169,0
CP000253.1 1539757 . A G 1352.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:55:99:1381,102,0
CP000253.1 1539871 . C T 1283.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,51:51:93:1312,93,0
CP000253.1 1540339 . G A 220.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:249,18,0
CP000253.1 1540378 . G A 292.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:321,24,0
CP000253.1 1540426 . T C 1267.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2851;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:90:1296,90,0
CP000253.1 1540467 . A G 2036.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3953;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,85:86:99:2065,144,0
CP000253.1 1540606 . T C 2608.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,116:118:99:2637,181,0
CP000253.1 1540870 . G A 299.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.25;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:328,24,0
CP000253.1 1541891 . A G 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 1542356 . T C 1415.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0011;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1444,102,0
CP000253.1 1542663 . T C 2690.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2719,193,0
CP000253.1 1542755 . T C 2891.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2613;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,119:120:99:2920,205,0
CP000253.1 1542849 . A G 3055.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3058;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3084,214,0
CP000253.1 1543790 . A T 2910.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2939,205,0
CP000253.1 1543880 . G A 2418.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2447,172,0
CP000253.1 1544330 . T C 1059.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1088,75,0
CP000253.1 1544766 . G A 1028.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4493;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1057,72,0
CP000253.1 1544799 . G A 957.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:986,69,0
CP000253.1 1545465 . G A 1505.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2111;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1534,105,0
CP000253.1 1546201 . G A 2243.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2272,163,0
CP000253.1 1546240 . T C 2272.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9617;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2301,163,0
CP000253.1 1546243 . G A 2270.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2299,163,0
CP000253.1 1546417 . A G 2655.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.38;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2684,196,0
CP000253.1 1548726 . G A 1076.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.91;ReadPosRankSum=-1.144;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,46:47:78:1105,78,0
CP000253.1 1548762 . G A 874.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:63:903,63,0
CP000253.1 1548798 . G A 545.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:574,42,0
CP000253.1 1548880 . G A 175.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.32;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:7:15:204,15,0
CP000253.1 1548995 . C T 268.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:297,21,0
CP000253.1 1550004 . G T 310.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:339,24,0
CP000253.1 1551710 . T C 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1551877 . G T 275.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:304,21,0
CP000253.1 1551888 . T C 264.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:293,21,0
CP000253.1 1552316 . G A 1604.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1633,114,0
CP000253.1 1552354 . T C 1644.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1673,117,0
CP000253.1 1552400 . A C 1941.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1970,138,0
CP000253.1 1552616 . A G 1888.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:76:99:1917,135,0
CP000253.1 1552775 . A G 1905.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1934,135,0
CP000253.1 1552799 . G A 1930.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1959,135,0
CP000253.1 1552997 . G A 1833.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0118;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1862,132,0
CP000253.1 1553039 . G A 1359.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.75;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,49:50:99:1388,99,0
CP000253.1 1553060 . C T 1080.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:78:1109,78,0
CP000253.1 1553135 . A G 1139.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:48:81:1168,81,0
CP000253.1 1553165 . A G 1267.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:90:1296,90,0
CP000253.1 1553204 . G A 1350.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1379,96,0
CP000253.1 1554114 . A T 2370.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2399,169,0
CP000253.1 1556176 . T A 347.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:376,27,0
CP000253.1 1556334 . C T 189.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:10:15:218,15,0
CP000253.1 1556435 . A T 164.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:193,15,0
CP000253.1 1556598 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1556737 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1556740 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1556815 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1556850 . C G 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 1556890 . G A 138.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:166,12,0
CP000253.1 1556983 . A T 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1557031 . G C 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 1557056 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1557064 . T A 264.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:293,21,0
CP000253.1 1557076 . A C 276.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:305,21,0
CP000253.1 1557121 . A T 273.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:302,21,0
CP000253.1 1557148 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1557182 . G A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1557220 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1557323 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1557406 . T A 459.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:488,33,0
CP000253.1 1557515 . A T 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1557596 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1557982 . G T 1612.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.09;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1641,111,0
CP000253.1 1559212 . A G 467.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:36:496,36,0
CP000253.1 1559270 . G A 567.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:42:596,42,0
CP000253.1 1559330 . G C 948.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:69:977,69,0
CP000253.1 1559460 . A G 1695.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1724,117,0
CP000253.1 1559733 . T A 2004.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6271;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2033,138,0
CP000253.1 1559883 . T C 800.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:57:829,57,0
CP000253.1 1559959 . G T 448.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:477,33,0
CP000253.1 1560055 . A T 370.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.60;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:27:399,27,0
CP000253.1 1560693 . C T 1499.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1528,108,0
CP000253.1 1561683 . C T 1181.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:87:1210,87,0
CP000253.1 1562753 . G A 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1562896 . A C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1562913 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1563941 . C A 777.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:806,54,0
CP000253.1 1564212 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1565153 . T A 2756.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,116:117:99:2785,193,0
CP000253.1 1565573 . T A 2461.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5658;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2490,175,0
CP000253.1 1565597 . G A 2584.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2613,184,0
CP000253.1 1565707 . T A 5027.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.646;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2505;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.49;ReadPosRankSum=-0.534;SOR=0.344 GT:AD:DP:GQ:PL 1/1:2,212:215:99:5056,349,0
CP000253.1 1565816 . G A 5226.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8452;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,224:225:99:5255,364,0
CP000253.1 1565969 . T A 3979.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.247;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9013;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.36;ReadPosRankSum=-0.586;SOR=0.850 GT:AD:DP:GQ:PL 1/1:2,149:152:99:4008,292,0
CP000253.1 1565987 . G T 3410.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.07;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3439,247,0
CP000253.1 1565996 . A G 2955.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2984,217,0
CP000253.1 1567981 . G T 522.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:551,39,0
CP000253.1 1568089 . T C 849.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:60:878,60,0
CP000253.1 1568224 . T C 455.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:21:33:484,33,0
CP000253.1 1568495 . A T 88.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:116,9,0
CP000253.1 1568654 . C A 392.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.06;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:30:421,30,0
CP000253.1 1568742 . G T 294.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:323,24,0
CP000253.1 1569116 . A G 2348.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2377,166,0
CP000253.1 1569628 . A G 348.03 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.095;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7748;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.40;ReadPosRankSum=-1.457;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,18:20:12:376,0,12
CP000253.1 1569982 . T C 268.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:297,21,0
CP000253.1 1570509 . G A 2973.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4726;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3002,208,0
CP000253.1 1570551 . A C 3163.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3192,220,0
CP000253.1 1570650 . T C 2627.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2656,187,0
CP000253.1 1570812 . C G 2416.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7264;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2445,172,0
CP000253.1 1570935 . A G 1617.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=59.63;MQ0=0;QD=23.79;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1646,117,0
CP000253.1 1571051 . G A 1731.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1760,123,0
CP000253.1 1571181 . C T 1598.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1627,111,0
CP000253.1 1571481 . G A 3499.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3528,241,0
CP000253.1 1571646 . G A 2519.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2548,175,0
CP000253.1 1571775 . C T 233.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:10:21:262,21,0
CP000253.1 1571812 . T A 435.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.24;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:33:464,33,0
CP000253.1 1571910 . G A 851.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:60:880,60,0
CP000253.1 1572637 . A T 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 1572651 . G A 179.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:208,15,0
CP000253.1 1572676 . C T 386.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:415,30,0
CP000253.1 1573114 . A C 1062.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,41:41:78:1091,78,0
CP000253.1 1573593 . T C 1277.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:90:1306,90,0
CP000253.1 1573887 . C G 261.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:290,21,0
CP000253.1 1573896 . A G 98.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:126,9,0
CP000253.1 1574002 . G T 599.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:45:628,45,0
CP000253.1 1574125 . T A 1972.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0021;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2001,138,0
CP000253.1 1574167 . A T 2647.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1071;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,117:118:99:2676,184,0
CP000253.1 1574176 . T A 2533.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4449;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2562,175,0
CP000253.1 1574179 . G A 2462.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4175;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,112:113:99:2491,172,0
CP000253.1 1576290 . G A 925.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.5314;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:66:954,66,0
CP000253.1 1576359 . T C 1277.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.980;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=-0.134;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,51:52:93:1306,93,0
CP000253.1 1576386 . T C 1225.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:54:87:1254,87,0
CP000253.1 1576400 . A T 1267.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1296,90,0
CP000253.1 1576415 . A G 1282.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1311,93,0
CP000253.1 1576419 . C T 1252.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:54:90:1281,90,0
CP000253.1 1576425 . T C 1113.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:81:1142,81,0
CP000253.1 1576434 . C T 1019.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1048,72,0
CP000253.1 1576440 . A G 1134.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1163,81,0
CP000253.1 1576449 . T C 907.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.14;ReadPosRankSum=-1.270;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,40:43:66:936,66,0
CP000253.1 1576512 . C T 719.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:748,51,0
CP000253.1 1576556 . C T 1016.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:45:72:1045,72,0
CP000253.1 1576566 . A G 978.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7840;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:45:69:1007,69,0
CP000253.1 1576608 . T A 1056.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1085,75,0
CP000253.1 1576655 . T G 934.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.143;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.37;ReadPosRankSum=-0.694;SOR=0.464 GT:AD:DP:GQ:PL 1/1:1,39:40:66:963,66,0
CP000253.1 1576740 . A G 651.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:680,48,0
CP000253.1 1576842 . G A 345.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:374,27,0
CP000253.1 1576872 . C T 458.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:36:487,36,0
CP000253.1 1576887 . G A 739.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:31:54:768,54,0
CP000253.1 1576917 . T C 862.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7460;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:63:891,63,0
CP000253.1 1576934 . A G 1106.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.4679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:81:1135,81,0
CP000253.1 1577205 . C T 1648.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.1780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1677,120,0
CP000253.1 1577460 . A G 2254.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.999 GT:AD:DP:GQ:PL 1/1:0,95:96:99:2283,160,0
CP000253.1 1577549 . A G 1156.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.54;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:43:84:1185,84,0
CP000253.1 1577674 . C T 402.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:431,30,0
CP000253.1 1577820 . A G 2580.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:115:99:2609,184,0
CP000253.1 1577826 . T A 2646.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2675,190,0
CP000253.1 1577841 . T A 2725.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,114:116:99:2754,193,0
CP000253.1 1577862 . T C 3141.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7624;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3170,220,0
CP000253.1 1577873 . G A 3175.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7291;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3204,223,0
CP000253.1 1577934 . T A 3733.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4712;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3762,262,0
CP000253.1 1577939 . T C 3779.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9944;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3808,268,0
CP000253.1 1578117 . T C 4664.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9413;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.09;ReadPosRankSum=-1.124;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,201:203:99:4693,322,0
CP000253.1 1578207 . A T 3950.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,166:166:99:3979,274,0
CP000253.1 1578210 . A T 3901.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7901;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,163:163:99:3930,271,0
CP000253.1 1578243 . G A 3025.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1344;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3054,214,0
CP000253.1 1578246 . A G 2988.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,120:122:99:3017,217,0
CP000253.1 1578423 . G A 353.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:382,27,0
CP000253.1 1578480 . A G 403.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:432,30,0
CP000253.1 1578728 . T G 175.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.32;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:204,15,0
CP000253.1 1579166 . C T 704.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:51:733,51,0
CP000253.1 1579666 . T C 2703.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2732,193,0
CP000253.1 1581495 . C A 1791.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1820,129,0
CP000253.1 1581658 . T C 3401.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.691;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=0.511;SOR=0.317 GT:AD:DP:GQ:PL 1/1:1,138:140:99:3430,227,0
CP000253.1 1581880 . A T 5858.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,233:233:99:5887,412,0
CP000253.1 1581980 . C T 5820.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.7147;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,241:241:99:5849,415,0
CP000253.1 1582213 . G T 2586.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1401;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2615,184,0
CP000253.1 1582435 . C T 1923.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=1.073 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1952,138,0
CP000253.1 1582609 . G A 4415.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4444,304,0
CP000253.1 1582636 . T C 4338.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.769;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.20;ReadPosRankSum=1.097;SOR=0.399 GT:AD:DP:GQ:PL 1/1:2,185:188:99:4367,304,0
CP000253.1 1582807 . C T 4386.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.798;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0610;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.92;ReadPosRankSum=0.236;SOR=0.504 GT:AD:DP:GQ:PL 1/1:1,175:176:99:4415,310,0
CP000253.1 1583192 . A T 777.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.742;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5741;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.22;ReadPosRankSum=1.736;SOR=0.405 GT:AD:DP:GQ:PL 1/1:1,34:35:57:806,57,0
CP000253.1 1583201 . A T 760.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:35:54:789,54,0
CP000253.1 1583324 . C A 1219.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1248,87,0
CP000253.1 1583473 . T A 2307.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2708;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2336,163,0
CP000253.1 1583872 . A C 1527.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1556,111,0
CP000253.1 1583971 . G T 2357.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.79;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2386,169,0
CP000253.1 1585032 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1585091 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1585114 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1585290 . G A 1185.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:51:84:1214,84,0
CP000253.1 1585522 . G A 2301.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,93:94:99:2330,166,0
CP000253.1 1585553 . T G 2290.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2319,166,0
CP000253.1 1585580 . A G 2609.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9686;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2638,187,0
CP000253.1 1586381 . A T 2816.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.862;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.15;ReadPosRankSum=-0.835;SOR=0.426 GT:AD:DP:GQ:PL 1/1:1,111:114:99:2845,202,0
CP000253.1 1586603 . G A 3044.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7708;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3073,214,0
CP000253.1 1586792 . T C 1694.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1723,123,0
CP000253.1 1586801 . G C 1549.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1578,111,0
CP000253.1 1586836 . C T 1411.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1440,102,0
CP000253.1 1586944 . T C 3114.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4602;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=1.227 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3143,226,0
CP000253.1 1586959 . C T 3450.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=1.072 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3479,247,0
CP000253.1 1587127 . T C 4013.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7284;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,177:179:99:4042,280,0
CP000253.1 1587523 . G A 360.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:389,27,0
CP000253.1 1587772 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.78;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:12:179,12,0
CP000253.1 1587947 . C T 2103.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2132,144,0
CP000253.1 1588266 . A T 1194.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=1.280 GT:AD:DP:GQ:PL 1/1:0,45:45:87:1223,87,0
CP000253.1 1588574 . C G 4894.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2180;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,202:203:99:4923,349,0
CP000253.1 1588709 . A T 5832.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.1943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,226:226:99:5861,415,0
CP000253.1 1589225 . A T 2405.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2434,175,0
CP000253.1 1589228 . G A 2331.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9229;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=1.080 GT:AD:DP:GQ:PL 1/1:0,89:91:99:2360,169,0
CP000253.1 1589306 . G A 2990.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0612;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3019,214,0
CP000253.1 1589480 . C T 4285.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4314,298,0
CP000253.1 1589720 . C T 2028.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5601;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2057,144,0
CP000253.1 1589819 . A C 965.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,39:39:69:994,69,0
CP000253.1 1590024 . G A 1203.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1232,84,0
CP000253.1 1590032 . T C 1208.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1237,84,0
CP000253.1 1590056 . A G 1183.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1212,84,0
CP000253.1 1590137 . G A 854.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:883,60,0
CP000253.1 1590210 . T G 412.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:441,30,0
CP000253.1 1590435 . G A 829.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:60:858,60,0
CP000253.1 1590870 . A G 2211.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.165 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2240,163,0
CP000253.1 1591049 . C T 3008.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1449;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3037,211,0
CP000253.1 1592154 . G A 2129.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7590;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:86:99:2158,156,0
CP000253.1 1592436 . C T 1967.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8064;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1996,141,0
CP000253.1 1592463 . A G 1906.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=1.209 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1935,138,0
CP000253.1 1592670 . A G 746.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:54:775,54,0
CP000253.1 1592688 . A T 875.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:63:904,63,0
CP000253.1 1592865 . G A 3703.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=1.156 GT:AD:DP:GQ:PL 1/1:0,149:151:99:3732,268,0
CP000253.1 1593444 . T A 2903.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,115:116:99:2932,208,0
CP000253.1 1593456 . C T 3044.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3073,217,0
CP000253.1 1593978 . G A 3651.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0433;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3680,256,0
CP000253.1 1594080 . A G 3148.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3177,223,0
CP000253.1 1594287 . T A 1948.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2137;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1977,138,0
CP000253.1 1594847 . G A 663.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:692,48,0
CP000253.1 1595080 . C T 1592.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2591;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=22.12;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1621,111,0
CP000253.1 1595510 . A T 190.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:219,15,0
CP000253.1 1595526 . A T 190.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:219,15,0
CP000253.1 1595601 . T A 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1595631 . G A 352.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:381,27,0
CP000253.1 1595638 . T C 351.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:380,27,0
CP000253.1 1595733 . G A 265.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:294,21,0
CP000253.1 1595982 . C T 1678.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1707,117,0
CP000253.1 1596303 . T G 273.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:302,21,0
CP000253.1 1596304 . A C 265.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.15;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:294,21,0
CP000253.1 1596310 . A T 275.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:304,21,0
CP000253.1 1596320 . A G 268.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:297,21,0
CP000253.1 1596346 . C T 277.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:306,21,0
CP000253.1 1596723 . G A 1444.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2872;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1473,102,0
CP000253.1 1596759 . C G 1155.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:52:81:1184,81,0
CP000253.1 1596766 . G A 1225.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1254,87,0
CP000253.1 1596772 . G C 1189.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:50:84:1218,84,0
CP000253.1 1597018 . C T 2778.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.23;ReadPosRankSum=0.360;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,124:126:99:2807,196,0
CP000253.1 1597045 . C T 2795.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9763;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,123:124:99:2824,193,0
CP000253.1 1597048 . T A 2872.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8084;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,125:125:99:2901,199,0
CP000253.1 1597226 . A T 1760.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1789,126,0
CP000253.1 1597255 . G T 1506.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,56:57:99:1535,108,0
CP000253.1 1597398 . T G 685.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:30:51:714,51,0
CP000253.1 1597415 . T C 869.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:63:898,63,0
CP000253.1 1597435 . A T 900.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.30;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:66:929,66,0
CP000253.1 1597436 . A G 905.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.45;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:66:934,66,0
CP000253.1 1597472 . A G 823.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6998;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:60:852,60,0
CP000253.1 1597497 . A G 550.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:579,42,0
CP000253.1 1597678 . C T 599.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4742;MLEAC=2;MLEAF=1.00;MQ=56.48;MQ0=0;QD=24.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:45:628,45,0
CP000253.1 1597700 . C T 507.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4968;MLEAC=2;MLEAF=1.00;MQ=53.76;MQ0=0;QD=21.16;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:536,39,0
CP000253.1 1597713 . T A 124.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.345;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.37;MQ0=0;MQRankSum=2.100;QD=15.50;ReadPosRankSum=2.100;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,6:8:12:152,12,0
CP000253.1 1597718 . G C 125.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.319;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.37;MQ0=0;MQRankSum=2.100;QD=15.63;ReadPosRankSum=2.100;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,6:8:12:153,12,0
CP000253.1 1597721 . A T 124.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.100;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.37;MQ0=0;MQRankSum=2.100;QD=15.50;ReadPosRankSum=2.100;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,6:8:12:152,12,0
CP000253.1 1597728 . A G 125.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.37;MQ0=0;QD=15.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:153,12,0
CP000253.1 1597758 . A G 124.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.319;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.37;MQ0=0;MQRankSum=2.100;QD=15.50;ReadPosRankSum=2.100;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,6:8:12:152,12,0
CP000253.1 1597762 . T A 109.28 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=39.03;MQ0=0;MQRankSum=1.510;QD=12.14;ReadPosRankSum=2.515;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:9:137,0,9
CP000253.1 1597768 . G T 125.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.025;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=39.03;MQ0=0;MQRankSum=0.674;QD=13.89;ReadPosRankSum=1.593;SOR=0.515 GT:AD:DP:GQ:PL 1/1:2,7:9:12:153,12,0
CP000253.1 1597769 . A T 109.79 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.100;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=39.03;MQ0=0;MQRankSum=1.510;QD=12.20;ReadPosRankSum=1.803;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:23:138,0,23
CP000253.1 1597831 . G A 527.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=55.48;MQ0=0;QD=23.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:556,42,0
CP000253.1 1597924 . T A 547.18 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.342;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4957;MLEAC=2;MLEAF=1.00;MQ=59.24;MQ0=0;MQRankSum=3.816;QD=20.27;ReadPosRankSum=-0.713;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,26:27:10:575,10,0
CP000253.1 1597925 . G A 582.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.738;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6291;MLEAC=2;MLEAF=1.00;MQ=59.24;MQ0=0;MQRankSum=3.816;QD=21.57;ReadPosRankSum=-0.711;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,26:27:9:610,9,0
CP000253.1 1597936 . A C 83.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.132;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.4605;MLEAC=1;MLEAF=0.500;MQ=59.40;MQ0=0;MQRankSum=0.783;QD=2.46;ReadPosRankSum=-4.014;SOR=0.889 GT:AD:DP:GQ:PL 0/1:27,7:34:99:112,0,614
CP000253.1 1597943 . A G 733.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.4624;MLEAC=2;MLEAF=1.00;MQ=59.57;MQ0=0;QD=22.93;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:54:762,54,0
CP000253.1 1597976 . T C 1245.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2460;MLEAC=2;MLEAF=1.00;MQ=59.74;MQ0=0;QD=24.43;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:54:90:1274,90,0
CP000253.1 1598267 . A G 971.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:37:72:1000,72,0
CP000253.1 1598288 . G A 596.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:45:625,45,0
CP000253.1 1598489 . G T 1533.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1562,111,0
CP000253.1 1598611 . C T 2187.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2216,151,0
CP000253.1 1598636 . A T 2191.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2220,154,0
CP000253.1 1598654 . A G 2137.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.925;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.27;ReadPosRankSum=-0.939;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,95:96:99:2166,147,0
CP000253.1 1599077 . G A 3808.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,161:161:99:3837,271,0
CP000253.1 1599095 . C T 3956.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,168:168:99:3985,277,0
CP000253.1 1599155 . C T 3737.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4487;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3766,265,0
CP000253.1 1599380 . T C 2297.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:96:99:2326,169,0
CP000253.1 1599443 . G A 1965.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,81:84:99:1994,144,0
CP000253.1 1599557 . T A 2941.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,126:126:99:2970,205,0
CP000253.1 1600491 . T C 185.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.66;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:10:15:214,15,0
CP000253.1 1600561 . T C 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1601461 . C T 858.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:60:887,60,0
CP000253.1 1602356 . C T 137.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:165,12,0
CP000253.1 1602405 . G A 184.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:213,15,0
CP000253.1 1602598 . C T 583.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:612,42,0
CP000253.1 1602756 . A G 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1602830 . C G 225.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:254,18,0
CP000253.1 1602895 . A T 176.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:205,15,0
CP000253.1 1602902 . C T 258.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.76;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:21:287,21,0
CP000253.1 1602975 . A G 396.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9736;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:17:30:425,30,0
CP000253.1 1603064 . C T 585.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:614,42,0
CP000253.1 1603236 . G T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1603481 . C A 310.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:24:339,24,0
CP000253.1 1603627 . A T 682.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.02;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:711,51,0
CP000253.1 1604196 . G A 737.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:54:766,54,0
CP000253.1 1604327 . A T 1093.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1122,78,0
CP000253.1 1604363 . C G 1031.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1060,75,0
CP000253.1 1604406 . T A 1191.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:50:87:1220,87,0
CP000253.1 1604508 . T C 1364.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1393,96,0
CP000253.1 1604525 . C A 1329.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1358,93,0
CP000253.1 1604633 . C T 849.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:60:878,60,0
CP000253.1 1604677 . C A 675.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.80;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:32:48:704,48,0
CP000253.1 1604691 . C T 652.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.20;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:48:681,48,0
CP000253.1 1604812 . G T 83.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:111,9,0
CP000253.1 1604828 . T C 152.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:181,15,0
CP000253.1 1604860 . A T 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1604950 . C T 321.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:15:24:350,24,0
CP000253.1 1605008 . A G 433.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.66;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:462,33,0
CP000253.1 1605654 . T C 1552.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1581,111,0
CP000253.1 1606198 . T A 2648.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9844;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2677,184,0
CP000253.1 1606889 . T C 2791.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2820,196,0
CP000253.1 1606916 . A G 2564.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.769;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1070;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.32;ReadPosRankSum=-1.608;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,109:110:99:2593,181,0
CP000253.1 1606979 . G A 1758.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1787,123,0
CP000253.1 1606990 . C T 1583.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1612,111,0
CP000253.1 1606993 . G T 1583.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1612,111,0
CP000253.1 1607161 . A T 362.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:391,27,0
CP000253.1 1607219 . T C 606.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:635,45,0
CP000253.1 1607221 . A C 592.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:621,45,0
CP000253.1 1607521 . C T 880.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.02;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:63:909,63,0
CP000253.1 1607644 . C T 875.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,33:33:66:904,66,0
CP000253.1 1607740 . T C 2675.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7118;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2704,187,0
CP000253.1 1608073 . T A 251.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.48;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:21:280,21,0
CP000253.1 1608220 . T G 380.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:409,30,0
CP000253.1 1608243 . T A 463.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.99;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:36:492,36,0
CP000253.1 1608314 . C T 1790.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7046;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1819,129,0
CP000253.1 1608359 . G A 3269.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.949;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.87;ReadPosRankSum=-1.031;SOR=0.462 GT:AD:DP:GQ:PL 1/1:1,136:137:99:3298,229,0
CP000253.1 1608397 . C A 3483.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3512,241,0
CP000253.1 1608680 . G A 992.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1021,72,0
CP000253.1 1608721 . T A 534.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:563,39,0
CP000253.1 1609426 . A C 2721.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6682;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2750,202,0
CP000253.1 1610286 . G A 2788.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6833;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,113:115:99:2817,199,0
CP000253.1 1610289 . T C 2726.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2755,196,0
CP000253.1 1610587 . T C 307.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:336,24,0
CP000253.1 1611026 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1611223 . T G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1611253 . C T 90.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:118,9,0
CP000253.1 1611298 . T C 90.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:118,9,0
CP000253.1 1611310 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1611317 . A T 90.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:118,9,0
CP000253.1 1611513 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1611595 . C A 189.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:218,15,0
CP000253.1 1611610 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1611683 . C G 185.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.66;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:214,15,0
CP000253.1 1611706 . G T 189.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:218,15,0
CP000253.1 1611779 . C T 212.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:241,18,0
CP000253.1 1611781 . G A 225.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:254,18,0
CP000253.1 1611784 . T G 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 1611786 . C T 226.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:255,18,0
CP000253.1 1611790 . A G 224.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:253,18,0
CP000253.1 1611791 . T C 222.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:251,18,0
CP000253.1 1611800 . A T 269.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:298,21,0
CP000253.1 1611813 . C T 267.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:296,21,0
CP000253.1 1611850 . A G 361.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:390,27,0
CP000253.1 1611875 . C G 403.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:432,30,0
CP000253.1 1611878 . T G 406.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:435,30,0
CP000253.1 1611881 . T A 438.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:467,33,0
CP000253.1 1612228 . C T 796.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:57:825,57,0
CP000253.1 1612241 . T C 812.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.035;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.97;ReadPosRankSum=-0.315;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,36:37:57:841,57,0
CP000253.1 1612255 . T C 866.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:60:895,60,0
CP000253.1 1612300 . T A 598.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7459;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:42:627,42,0
CP000253.1 1612303 . C A 598.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8492;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:42:627,42,0
CP000253.1 1612333 . A C 407.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.39;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:436,30,0
CP000253.1 1612396 . T G 349.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:378,27,0
CP000253.1 1613140 . A T 491.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:520,36,0
CP000253.1 1613689 . A G 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 1613805 . A C 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 1615733 . C G 3849.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3878,274,0
CP000253.1 1616120 . T C 1435.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3285;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.15;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1464,108,0
CP000253.1 1616653 . T G 5362.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3938;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,219:219:99:5391,379,0
CP000253.1 1617626 . T C 2545.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2574,181,0
CP000253.1 1617891 . C A 703.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:732,51,0
CP000253.1 1618041 . G T 2157.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2186,151,0
CP000253.1 1618159 . C T 3362.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4744;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3391,235,0
CP000253.1 1618384 . C A 935.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6040;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:41:66:964,66,0
CP000253.1 1618440 . C T 833.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:60:862,60,0
CP000253.1 1618553 . G A 1228.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1257,87,0
CP000253.1 1619699 . T C 305.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:334,24,0
CP000253.1 1619909 . T C 1638.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9047;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1667,117,0
CP000253.1 1620720 . G A 892.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,35:35:66:921,66,0
CP000253.1 1621415 . T A 4828.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.558;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.27;ReadPosRankSum=-1.184;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,198:199:99:4857,342,0
CP000253.1 1621640 . A T 3847.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.866;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.54;ReadPosRankSum=0.096;SOR=0.357 GT:AD:DP:GQ:PL 1/1:1,144:146:99:3876,277,0
CP000253.1 1622407 . C A 1455.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8913;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1484,105,0
CP000253.1 1622752 . A G 1116.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.796;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.79;ReadPosRankSum=0.106;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,48:49:81:1145,81,0
CP000253.1 1623811 . A C 403.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:432,30,0
CP000253.1 1624004 . G T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1624143 . C A 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 1624497 . T C 798.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.822;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7523;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.49;ReadPosRankSum=-1.228;SOR=0.507 GT:AD:DP:GQ:PL 1/1:1,33:34:57:827,57,0
CP000253.1 1624972 . C T 756.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:34:54:785,54,0
CP000253.1 1625026 . T C 1059.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:47:75:1088,75,0
CP000253.1 1625511 . G A 1959.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1988,138,0
CP000253.1 1625694 . A T 1642.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1671,117,0
CP000253.1 1625726 . G T 1695.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.772;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.88;ReadPosRankSum=1.490;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1724,120,0
CP000253.1 1626389 . T C 4710.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.953;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6248;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.06;ReadPosRankSum=0.530;SOR=0.505 GT:AD:DP:GQ:PL 1/1:3,185:189:99:4739,298,0
CP000253.1 1626465 . G A 4664.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7325;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,178:181:99:4693,334,0
CP000253.1 1626627 . G A 3408.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1158;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=23.84;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,143:145:99:3437,244,0
CP000253.1 1626696 . A G 3295.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,137:139:99:3324,232,0
CP000253.1 1626987 . C T 2442.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2471,178,0
CP000253.1 1627209 . A G 784.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.483;DP=35;Dels=0.00;ExcessHet=3.0103;FS=3.153;HaplotypeScore=8.4630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.42;ReadPosRankSum=-0.844;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,34:35:60:813,60,0
CP000253.1 1627479 . G A 3927.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,158:161:99:3956,280,0
CP000253.1 1627891 . A T 794.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:57:823,57,0
CP000253.1 1627961 . C A 450.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:479,33,0
CP000253.1 1628089 . T A 308.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:337,24,0
CP000253.1 1628320 . G A 1610.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1639,114,0
CP000253.1 1628344 . A G 1814.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,76:78:99:1843,129,0
CP000253.1 1628353 . T C 1831.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:79:99:1860,129,0
CP000253.1 1628520 . C T 1454.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1483,105,0
CP000253.1 1628541 . C T 1576.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1605,114,0
CP000253.1 1628555 . A G 1529.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1558,111,0
CP000253.1 1629138 . C T 6338.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.966;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.36;ReadPosRankSum=1.345;SOR=0.500 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6367,448,0
CP000253.1 1629204 . T A 6176.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.803;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.31;ReadPosRankSum=0.540;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,243:247:99:6205,439,0
CP000253.1 1629333 . G A 5971.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.968;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8841;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.96;ReadPosRankSum=1.732;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,229:230:99:6000,424,0
CP000253.1 1629564 . G C 3288.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3317,235,0
CP000253.1 1629588 . A T 3428.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.775;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2852;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.21;ReadPosRankSum=1.172;SOR=0.268 GT:AD:DP:GQ:PL 1/1:1,135:136:99:3457,250,0
CP000253.1 1629612 . T C 3316.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3345,238,0
CP000253.1 1629759 . T C 3015.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9750;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3044,214,0
CP000253.1 1631165 . A T 842.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0870;MLEAC=2;MLEAF=1.00;MQ=59.21;MQ0=0;MQRankSum=6.085;QD=23.41;ReadPosRankSum=0.434;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,35:36:60:871,60,0
CP000253.1 1631175 . C T 866.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0704;MLEAC=2;MLEAF=1.00;MQ=59.26;MQ0=0;QD=22.81;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:63:895,63,0
CP000253.1 1631292 . T C 477.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3650;MLEAC=2;MLEAF=1.00;MQ=58.71;MQ0=0;QD=22.75;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:22:36:506,36,0
CP000253.1 1631471 . C T 212.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:18:241,18,0
CP000253.1 1631509 . T A 210.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.12;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:18:239,18,0
CP000253.1 1631580 . A G 509.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:538,39,0
CP000253.1 1631649 . A G 20.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.832;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.79;MQ0=0;MQRankSum=1.046;QD=0.47;ReadPosRankSum=-3.601;SOR=0.638 GT:AD:DP:GQ:PL 0/1:39,5:44:49:49,0,901
CP000253.1 1631659 . G T 685.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;DP=75;Dels=0.00;ExcessHet=3.0103;FS=3.087;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=57.78;MQ0=0;MQRankSum=2.069;QD=9.14;ReadPosRankSum=-7.723;SOR=0.407 GT:AD:DP:GQ:PL 0/1:39,36:75:99:714,0,644
CP000253.1 1631660 . G C 659.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.057;DP=75;Dels=0.00;ExcessHet=3.0103;FS=1.975;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=57.78;MQ0=0;MQRankSum=2.069;QD=8.80;ReadPosRankSum=-7.723;SOR=0.407 GT:AD:DP:GQ:PL 0/1:39,36:75:99:688,0,650
CP000253.1 1631694 . A G 580.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.349;DP=90;Dels=0.00;ExcessHet=3.0103;FS=2.805;HaplotypeScore=12.4086;MLEAC=1;MLEAF=0.500;MQ=58.15;MQ0=0;MQRankSum=-2.648;QD=6.45;ReadPosRankSum=6.998;SOR=1.040 GT:AD:DP:GQ:PL 0/1:52,38:90:99:609,0,1024
CP000253.1 1631700 . T G 1327.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7391;MLEAC=2;MLEAF=1.00;MQ=59.50;MQ0=0;QD=26.03;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1356,99,0
CP000253.1 1631703 . T C 1229.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.596;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7877;MLEAC=2;MLEAF=1.00;MQ=59.50;MQ0=0;MQRankSum=0.000;QD=23.65;ReadPosRankSum=1.202;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,51:52:73:1258,73,0
CP000253.1 1631758 . C A 2009.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.642;DP=79;Dels=0.00;ExcessHet=3.0103;FS=3.641;HaplotypeScore=10.0369;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.44;ReadPosRankSum=-0.378;SOR=0.733 GT:AD:DP:GQ:PL 1/1:1,78:79:99:2038,125,0
CP000253.1 1631800 . A G 1954.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1983,141,0
CP000253.1 1632629 . G A 42.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.408;DP=88;Dels=0.00;ExcessHet=3.0103;FS=6.378;HaplotypeScore=85.7868;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=0.49;ReadPosRankSum=-4.119;SOR=2.276 GT:AD:DP:GQ:PL 0/1:81,7:88:71:71,0,1794
CP000253.1 1632755 . C T 1647.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1676,117,0
CP000253.1 1633185 . G A 681.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:51:710,51,0
CP000253.1 1633373 . A G 1362.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1391,99,0
CP000253.1 1633382 . C T 1368.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3614;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.84;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:52:99:1397,99,0
CP000253.1 1633397 . G A 1305.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:93:1334,93,0
CP000253.1 1633447 . G A 1392.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1421,102,0
CP000253.1 1633451 . A G 1291.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:93:1320,93,0
CP000253.1 1633468 . G A 1367.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1396,99,0
CP000253.1 1633505 . A T 1564.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1593,111,0
CP000253.1 1633895 . G A 5473.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.586;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.6458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.53;ReadPosRankSum=-1.159;SOR=0.718 GT:AD:DP:GQ:PL 1/1:4,239:246:99:5502,306,0
CP000253.1 1634034 . G A 3699.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2128;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3728,262,0
CP000253.1 1634303 . T C 393.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:30:422,30,0
CP000253.1 1634463 . A C 2185.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.975;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.29;ReadPosRankSum=-0.908;SOR=0.293 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2214,156,0
CP000253.1 1634471 . A G 2168.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6366;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2197,154,0
CP000253.1 1634485 . A G 2246.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2275,160,0
CP000253.1 1634496 . T G 2183.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2212,157,0
CP000253.1 1634514 . C T 2584.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2613,184,0
CP000253.1 1634523 . A G 2502.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2531,181,0
CP000253.1 1634592 . A G 2714.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=1.089 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2743,196,0
CP000253.1 1634643 . C A 2801.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,114:116:99:2830,202,0
CP000253.1 1634658 . T C 3055.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7034;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=1.198 GT:AD:DP:GQ:PL 1/1:0,119:120:99:3084,220,0
CP000253.1 1634688 . T C 3085.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.29;ReadPosRankSum=0.000;SOR=0.342 GT:AD:DP:GQ:PL 1/1:1,121:123:99:3114,223,0
CP000253.1 1634817 . G A 3520.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7783;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,140:143:99:3549,250,0
CP000253.1 1634847 . T A 3609.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2175;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3638,259,0
CP000253.1 1635192 . A T 1571.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.752;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2030;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.11;ReadPosRankSum=1.581;SOR=0.561 GT:AD:DP:GQ:PL 1/1:1,67:69:99:1600,111,0
CP000253.1 1635222 . C T 1355.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0657;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:56:99:1384,99,0
CP000253.1 1635478 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1635499 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1635527 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1635563 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1635601 . A T 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 1636348 . C T 2152.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2181,147,0
CP000253.1 1636721 . G A 3816.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8275;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.134 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3845,271,0
CP000253.1 1636746 . T C 3997.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=1.157 GT:AD:DP:GQ:PL 1/1:0,159:160:99:4026,283,0
CP000253.1 1636929 . A G 5490.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.32;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,201:202:99:5519,397,0
CP000253.1 1637010 . C T 5475.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.793;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=-0.008;SOR=0.268 GT:AD:DP:GQ:PL 1/1:1,213:215:99:5504,357,0
CP000253.1 1637343 . C T 4599.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.574;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.9756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.44;ReadPosRankSum=0.508;SOR=0.143 GT:AD:DP:GQ:PL 1/1:2,172:176:99:4628,334,0
CP000253.1 1637691 . C T 2350.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.872;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9546;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.49;ReadPosRankSum=1.354;SOR=0.824 GT:AD:DP:GQ:PL 1/1:1,95:96:99:2379,169,0
CP000253.1 1637703 . C T 2270.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7772;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=1.119 GT:AD:DP:GQ:PL 1/1:0,93:94:99:2299,163,0
CP000253.1 1637820 . A T 387.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.070;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.85;ReadPosRankSum=1.739;SOR=0.346 GT:AD:DP:GQ:PL 1/1:1,14:15:30:416,30,0
CP000253.1 1637838 . C T 346.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:375,27,0
CP000253.1 1638059 . C G 3852.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=1.350 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3881,277,0
CP000253.1 1638060 . C A 3896.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.675;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=2.390;SOR=1.041 GT:AD:DP:GQ:PL 1/1:2,149:151:99:3925,280,0
CP000253.1 1638140 . T A 4881.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.931;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5420;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.17;ReadPosRankSum=0.918;SOR=0.672 GT:AD:DP:GQ:PL 1/1:1,201:202:99:4910,343,0
CP000253.1 1638916 . A G 357.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:386,27,0
CP000253.1 1639361 . T C 1417.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1446,102,0
CP000253.1 1640337 . G A 3725.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4733;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,156:160:99:3754,268,0
CP000253.1 1640370 . A G 3708.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8529;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,156:157:99:3737,262,0
CP000253.1 1640979 . A T 2467.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2496,175,0
CP000253.1 1641036 . C T 2309.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2338,160,0
CP000253.1 1641264 . A G 1401.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.095;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.17;ReadPosRankSum=1.130;SOR=0.765 GT:AD:DP:GQ:PL 1/1:2,56:58:64:1430,64,0
CP000253.1 1641311 . G A 1738.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.340;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0686;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.73;ReadPosRankSum=-1.405;SOR=0.744 GT:AD:DP:GQ:PL 1/1:2,78:80:89:1767,89,0
CP000253.1 1641534 . G A 1782.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7086;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1811,126,0
CP000253.1 1641723 . T A 2866.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8991;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,123:123:99:2895,199,0
CP000253.1 1641996 . T C 2033.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0549;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2062,141,0
CP000253.1 1642417 . C T 904.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5876;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.54;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:66:933,66,0
CP000253.1 1642432 . C T 1077.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:75:1106,75,0
CP000253.1 1642446 . C T 1136.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5383;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1165,81,0
CP000253.1 1642576 . T A 1776.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1805,123,0
CP000253.1 1642837 . G T 670.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:51:699,51,0
CP000253.1 1643001 . G A 2302.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2331,160,0
CP000253.1 1643101 . C T 2523.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2552,175,0
CP000253.1 1643248 . A G 2241.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.85;ReadPosRankSum=1.567;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,93:94:99:2270,160,0
CP000253.1 1643482 . T C 2407.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9438;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2436,172,0
CP000253.1 1644840 . G A 2740.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2769,193,0
CP000253.1 1645388 . G A 2624.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.722;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3053;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.08;ReadPosRankSum=1.469;SOR=0.830 GT:AD:DP:GQ:PL 1/1:2,107:109:99:2653,155,0
CP000253.1 1645790 . G A 3037.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2511;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.65;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,114:116:99:3066,220,0
CP000253.1 1645820 . T A 4229.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.530;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.88;ReadPosRankSum=-0.051;SOR=0.928 GT:AD:DP:GQ:PL 1/1:2,168:170:99:4258,304,0
CP000253.1 1645868 . G A 4462.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4491,313,0
CP000253.1 1646309 . G A 3793.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3822,268,0
CP000253.1 1647321 . C T 610.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:27:45:639,45,0
CP000253.1 1647926 . T A 1640.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1669,114,0
CP000253.1 1648089 . T G 1780.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6022;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1809,123,0
CP000253.1 1648221 . A G 768.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=25.63;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:57:797,57,0
CP000253.1 1648228 . T G 940.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;QD=25.43;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:38:69:969,69,0
CP000253.1 1648422 . G A 2347.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8145;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=1.289 GT:AD:DP:GQ:PL 1/1:0,95:97:99:2376,172,0
CP000253.1 1648678 . A T 3801.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.577;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8346;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.86;ReadPosRankSum=1.890;SOR=0.108 GT:AD:DP:GQ:PL 1/1:2,145:147:99:3830,274,0
CP000253.1 1649278 . A G 4003.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4032,280,0
CP000253.1 1649297 . C A 3887.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9676;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,154:155:99:3916,274,0
CP000253.1 1649378 . T C 2776.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=1.279 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2805,199,0
CP000253.1 1649402 . G A 1886.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.95;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1915,135,0
CP000253.1 1649417 . T C 1417.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.75;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1446,102,0
CP000253.1 1649424 . A G 1370.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.97;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,49:50:99:1399,99,0
CP000253.1 1649442 . T A 1240.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.57;SOR=1.154 GT:AD:DP:GQ:PL 1/1:0,45:45:90:1269,90,0
CP000253.1 1650382 . G A 2148.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5628;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2177,151,0
CP000253.1 1650487 . G A 2239.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2268,154,0
CP000253.1 1650502 . C T 2058.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.14;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2087,141,0
CP000253.1 1650547 . T A 1978.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2007,138,0
CP000253.1 1650589 . G A 1815.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=1.032 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1844,129,0
CP000253.1 1651783 . T A 3637.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,158:160:99:3666,253,0
CP000253.1 1652335 . A G 1399.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3360;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.22;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:96:1428,96,0
CP000253.1 1653482 . G A 4367.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,184:184:99:4396,304,0
CP000253.1 1653834 . C T 840.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:60:869,60,0
CP000253.1 1653865 . C G 1205.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1234,87,0
CP000253.1 1654152 . G A 1349.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:96:1378,96,0
CP000253.1 1654155 . T G 1312.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1341,93,0
CP000253.1 1654215 . A G 1367.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1396,99,0
CP000253.1 1654234 . A G 1303.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:96:1332,96,0
CP000253.1 1654449 . T C 3018.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6166;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=1.081 GT:AD:DP:GQ:PL 1/1:0,113:114:99:3047,217,0
CP000253.1 1654808 . T C 4705.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7472;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,193:193:99:4734,334,0
CP000253.1 1654981 . G A 3258.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0365;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;MQRankSum=11.181;QD=26.28;ReadPosRankSum=-1.178;SOR=0.582 GT:AD:DP:GQ:PL 1/1:1,123:125:99:3287,238,0
CP000253.1 1655260 . G A 1576.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8884;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1605,111,0
CP000253.1 1655488 . A T 2366.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:102:99:2395,166,0
CP000253.1 1655547 . A T 2315.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3750;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2344,163,0
CP000253.1 1656044 . A G 1779.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.600;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5391;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;MQRankSum=0.000;QD=23.73;ReadPosRankSum=1.038;SOR=0.150 GT:AD:DP:GQ:PL 1/1:2,73:76:99:1808,126,0
CP000253.1 1656303 . T C 2971.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3202;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,123:124:99:3000,208,0
CP000253.1 1656513 . G A 760.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:54:789,54,0
CP000253.1 1656663 . A C 671.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.765;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8907;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.16;ReadPosRankSum=-0.304;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,28:29:24:700,24,0
CP000253.1 1656918 . T A 922.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:66:951,66,0
CP000253.1 1656996 . C T 1532.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1561,108,0
CP000253.1 1658151 . G A 1654.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1683,123,0
CP000253.1 1658316 . A G 168.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:197,15,0
CP000253.1 1658403 . C T 106.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.16;MQ0=0;QD=15.18;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:9:134,9,0
CP000253.1 1658425 . T C 145.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.16;MQ0=0;QD=20.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:173,12,0
CP000253.1 1658442 . A G 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.16;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1658449 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.16;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1658495 . G T 132.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:160,12,0
CP000253.1 1658514 . A C 134.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:162,12,0
CP000253.1 1658963 . G A 2002.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:89:99:2031,141,0
CP000253.1 1659579 . G C 334.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:363,27,0
CP000253.1 1659583 . A C 336.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.15;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:365,27,0
CP000253.1 1660118 . G A 634.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:663,45,0
CP000253.1 1660279 . C T 1513.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1542,105,0
CP000253.1 1660696 . C T 714.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:743,51,0
CP000253.1 1661451 . A G 228.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:257,18,0
CP000253.1 1661453 . A G 233.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:262,18,0
CP000253.1 1662050 . T G 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 1662140 . A T 180.90 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.534;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.61;ReadPosRankSum=1.534;SOR=0.693 GT:AD:DP:GQ:PL 1/1:1,7:8:15:209,15,0
CP000253.1 1662233 . A G 201.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.18;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:18:230,18,0
CP000253.1 1662337 . G A 1468.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8033;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1497,105,0
CP000253.1 1662342 . T G 1467.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1496,105,0
CP000253.1 1662473 . A G 2584.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7801;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.67;ReadPosRankSum=-1.216;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,113:115:99:2613,181,0
CP000253.1 1662515 . T C 2662.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2691,187,0
CP000253.1 1662530 . G C 2701.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,120:121:99:2730,190,0
CP000253.1 1662572 . A T 2508.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4712;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,110:111:99:2537,175,0
CP000253.1 1666843 . T G 4985.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.851;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.38;ReadPosRankSum=0.046;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,188:190:99:5014,358,0
CP000253.1 1668396 . A T 567.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.936;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.84;ReadPosRankSum=0.537;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,25:26:42:596,42,0
CP000253.1 1668751 . G A 2358.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2387,166,0
CP000253.1 1669062 . A T 1952.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3124;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=1;QD=23.25;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,84:84:99:1981,138,0
CP000253.1 1669215 . C T 1549.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1578,108,0
CP000253.1 1669237 . C A 1309.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1338,93,0
CP000253.1 1669263 . T C 1066.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1095,78,0
CP000253.1 1669337 . A G 469.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:36:498,36,0
CP000253.1 1669384 . T A 178.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:7:15:207,15,0
CP000253.1 1669477 . G A 96.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:124,9,0
CP000253.1 1670256 . C T 655.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:28:48:684,48,0
CP000253.1 1670371 . A C 1060.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:75:1089,75,0
CP000253.1 1670386 . A C 1196.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1225,84,0
CP000253.1 1670437 . T C 1325.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1354,93,0
CP000253.1 1670479 . A G 1239.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1268,90,0
CP000253.1 1670502 . G A 962.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:39:69:991,69,0
CP000253.1 1670505 . G T 851.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:63:880,63,0
CP000253.1 1670562 . C T 656.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,26:26:48:685,48,0
CP000253.1 1670705 . T G 1983.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.668;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9890;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.55;ReadPosRankSum=1.389;SOR=1.293 GT:AD:DP:GQ:PL 1/1:2,70:73:99:2012,147,0
CP000253.1 1671037 . T C 5897.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2800;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.99;ReadPosRankSum=1.571;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,235:236:99:5926,418,0
CP000253.1 1671217 . T A 5791.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.768;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0324;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.65;ReadPosRankSum=0.752;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,234:240:99:5820,412,0
CP000253.1 1671400 . C T 4897.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.5140;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,184:188:99:4926,361,0
CP000253.1 1671456 . T C 4353.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8462;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=24.88;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4382,313,0
CP000253.1 1671859 . T C 4199.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.768;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8672;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.86;ReadPosRankSum=1.684;SOR=0.504 GT:AD:DP:GQ:PL 1/1:1,175:177:99:4228,298,0
CP000253.1 1671862 . T C 4239.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4268,301,0
CP000253.1 1671919 . A G 3574.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.728;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.17;ReadPosRankSum=1.586;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,141:143:99:3603,256,0
CP000253.1 1672065 . C T 1923.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3265;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1952,138,0
CP000253.1 1672084 . A C 1214.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.974;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.82;ReadPosRankSum=0.170;SOR=0.477 GT:AD:DP:GQ:PL 1/1:1,50:51:87:1243,87,0
CP000253.1 1672305 . A G 4044.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4073,292,0
CP000253.1 1673152 . A T 2303.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2332,160,0
CP000253.1 1673924 . G T 2893.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:123:99:2922,202,0
CP000253.1 1673954 . A G 2922.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:127:99:2951,208,0
CP000253.1 1674622 . C T 1761.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1790,123,0
CP000253.1 1674808 . T C 247.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:276,21,0
CP000253.1 1674838 . T C 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 1674841 . A T 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 1675021 . A T 2092.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4472;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.50;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2121,144,0
CP000253.1 1675270 . A T 439.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.941;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.15;ReadPosRankSum=1.755;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,18:19:33:468,33,0
CP000253.1 1675459 . T G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1675935 . T C 2161.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0450;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2190,150,0
CP000253.1 1676850 . T C 879.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:63:908,63,0
CP000253.1 1677119 . A T 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 1677262 . C T 211.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:240,18,0
CP000253.1 1677697 . T A 179.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:208,15,0
CP000253.1 1677754 . T C 146.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:174,12,0
CP000253.1 1678750 . G T 3211.76 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,136:137:99:3240,226,0
CP000253.1 1679180 . G A 378.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:407,30,0
CP000253.1 1679848 . G A 3036.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.089;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5387;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.69;ReadPosRankSum=1.718;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,122:126:99:3065,222,0
CP000253.1 1679902 . G A 3173.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2261;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3202,229,0
CP000253.1 1680085 . G A 3109.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3138,232,0
CP000253.1 1680130 . G T 3108.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.57;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3137,226,0
CP000253.1 1680646 . C G 124.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:152,12,0
CP000253.1 1680958 . A T 1086.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.18;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:75:1115,75,0
CP000253.1 1681006 . A C 1249.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1278,87,0
CP000253.1 1681027 . T A 1475.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1504,102,0
CP000253.1 1681099 . G A 1241.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1270,87,0
CP000253.1 1681257 . C T 4141.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.926;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.36;ReadPosRankSum=-1.110;SOR=0.357 GT:AD:DP:GQ:PL 1/1:1,169:170:99:4170,289,0
CP000253.1 1681723 . A G 2079.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2108,147,0
CP000253.1 1682397 . A T 400.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:429,30,0
CP000253.1 1683294 . C A 1373.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6070;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1402,99,0
CP000253.1 1683491 . T C 2450.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2479,175,0
CP000253.1 1683779 . A G 1133.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1162,81,0
CP000253.1 1683846 . T C 325.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:354,24,0
CP000253.1 1684245 . T A 4120.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.050;DP=183;Dels=0.00;ExcessHet=3.0103;FS=3.082;HaplotypeScore=9.6298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.52;ReadPosRankSum=0.815;SOR=0.293 GT:AD:DP:GQ:PL 1/1:1,182:183:99:4149,283,0
CP000253.1 1684359 . A G 4937.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,219:220:99:4966,340,0
CP000253.1 1684497 . C A 3563.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3592,253,0
CP000253.1 1684734 . T A 2443.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2472,175,0
CP000253.1 1684761 . G A 2307.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.504;DP=98;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5422;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=0.125;SOR=0.277 GT:AD:DP:GQ:PL 1/1:1,96:97:99:2336,132,0
CP000253.1 1684791 . G T 2653.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2682,190,0
CP000253.1 1684835 . C T 2980.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.559;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3130;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.63;ReadPosRankSum=2.268;SOR=0.853 GT:AD:DP:GQ:PL 1/1:2,119:122:99:3009,211,0
CP000253.1 1684917 . G A 3642.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3671,265,0
CP000253.1 1685010 . C T 4397.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3238;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4426,310,0
CP000253.1 1685106 . C T 5038.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5158;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,202:203:99:5067,355,0
CP000253.1 1685124 . G A 5066.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0518;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,212:214:99:5095,355,0
CP000253.1 1685975 . G A 5108.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.2992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,211:211:99:5137,364,0
CP000253.1 1685999 . T C 4869.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.3783;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,199:200:99:4898,349,0
CP000253.1 1686380 . A G 3180.76 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3209,235,0
CP000253.1 1686827 . T A 6033.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6296;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,244:244:99:6062,427,0
CP000253.1 1686836 . A C 5769.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.790;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.35;ReadPosRankSum=-1.272;SOR=0.230 GT:AD:DP:GQ:PL 1/1:1,236:239:99:5798,409,0
CP000253.1 1686839 . T C 5815.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,237:238:99:5844,409,0
CP000253.1 1686940 . G A 4851.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,203:204:99:4880,346,0
CP000253.1 1687010 . C T 3926.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,151:152:99:3955,280,0
CP000253.1 1687257 . A G 5198.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,208:208:99:5227,367,0
CP000253.1 1687800 . T A 386.77 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.75;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:30:415,30,0
CP000253.1 1687891 . C T 289.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:318,24,0
CP000253.1 1688289 . A G 2190.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2219,157,0
CP000253.1 1689030 . T C 1955.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.641;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4087;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.48;ReadPosRankSum=-1.594;SOR=0.447 GT:AD:DP:GQ:PL 1/1:1,86:88:99:1984,138,0
CP000253.1 1689194 . C T 2960.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2921;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2989,211,0
CP000253.1 1689568 . C T 3550.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4082;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,141:142:99:3579,259,0
CP000253.1 1689632 . G A 4306.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4335,310,0
CP000253.1 1690256 . T G 1101.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.593;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.87;ReadPosRankSum=0.975;SOR=0.432 GT:AD:DP:GQ:PL 1/1:1,40:41:58:1130,58,0
CP000253.1 1690634 . A T 5273.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.870;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.08;ReadPosRankSum=0.514;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,218:219:99:5302,367,0
CP000253.1 1690703 . C T 4820.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8989;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,204:205:99:4849,337,0
CP000253.1 1691782 . A T 3790.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4794;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,156:157:99:3819,268,0
CP000253.1 1691929 . T A 2311.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.999 GT:AD:DP:GQ:PL 1/1:0,95:96:99:2340,163,0
CP000253.1 1691986 . C T 1264.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1293,90,0
CP000253.1 1692150 . C T 92.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:120,9,0
CP000253.1 1692196 . A T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1692481 . A G 1793.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1822,123,0
CP000253.1 1692553 . C T 796.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:57:825,57,0
CP000253.1 1692698 . A G 2472.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=1.280 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2501,178,0
CP000253.1 1692709 . G A 2721.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.95;SOR=1.306 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2750,196,0
CP000253.1 1693111 . A G 3134.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3163,223,0
CP000253.1 1693112 . T C 3152.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.933;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6934;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.82;ReadPosRankSum=0.287;SOR=0.535 GT:AD:DP:GQ:PL 1/1:1,126:127:99:3181,223,0
CP000253.1 1693244 . A G 2577.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7545;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2606,184,0
CP000253.1 1693348 . A T 2307.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2336,163,0
CP000253.1 1693538 . G A 1295.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:56:93:1324,93,0
CP000253.1 1693847 . G A 1608.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.749;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.66;ReadPosRankSum=0.855;SOR=0.499 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1637,114,0
CP000253.1 1694024 . A T 1976.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=1.164 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2005,141,0
CP000253.1 1694069 . C T 2274.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=1.218 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2303,166,0
CP000253.1 1694222 . T C 4774.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4500;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,196:198:99:4803,340,0
CP000253.1 1694339 . T C 5693.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5348;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.65;ReadPosRankSum=1.448;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,230:231:99:5722,403,0
CP000253.1 1694381 . T C 6017.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,242:242:99:6046,427,0
CP000253.1 1694639 . A G 3958.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2799;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=1.008 GT:AD:DP:GQ:PL 1/1:0,158:159:99:3987,280,0
CP000253.1 1694861 . C T 614.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:643,45,0
CP000253.1 1695035 . C T 1015.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:72:1044,72,0
CP000253.1 1695179 . C T 1475.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1504,102,0
CP000253.1 1695305 . C T 913.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:38:66:942,66,0
CP000253.1 1695361 . A T 713.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:742,51,0
CP000253.1 1695393 . A G 730.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.479;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.30;ReadPosRankSum=1.640;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,35:36:26:759,26,0
CP000253.1 1695610 . C A 1321.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.807;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.32;ReadPosRankSum=-0.280;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,61:63:59:1350,59,0
CP000253.1 1695976 . C A 1283.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:90:1312,90,0
CP000253.1 1696070 . A T 1432.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2517;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.11;ReadPosRankSum=-1.175;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,61:62:99:1461,102,0
CP000253.1 1696190 . A T 1094.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1123,78,0
CP000253.1 1696274 . C T 1256.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,56:56:87:1285,87,0
CP000253.1 1697661 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1698010 . G A 818.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:57:847,57,0
CP000253.1 1698156 . G T 316.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:345,24,0
CP000253.1 1698438 . C G 134.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:162,12,0
CP000253.1 1698451 . T C 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1698511 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1698518 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1698575 . A T 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 1698598 . T A 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 1698602 . C T 133.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:161,12,0
CP000253.1 1698607 . A G 141.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:169,12,0
CP000253.1 1698609 . A T 137.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:165,12,0
CP000253.1 1698641 . C A 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4095;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 1699840 . A C 4865.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4731;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,215:215:99:4894,334,0
CP000253.1 1699996 . A T 2271.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2300,163,0
CP000253.1 1700173 . C T 395.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:424,30,0
CP000253.1 1700214 . T C 312.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:341,24,0
CP000253.1 1700847 . T C 2466.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2495,172,0
CP000253.1 1701289 . G T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1701349 . T A 442.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:471,33,0
CP000253.1 1701372 . G T 574.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:42:603,42,0
CP000253.1 1703165 . G A 3836.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0284;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,161:161:99:3865,268,0
CP000253.1 1703303 . G A 3799.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7628;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.57;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3828,277,0
CP000253.1 1703357 . C T 4348.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4354;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4377,310,0
CP000253.1 1703930 . T C 2930.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.023;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7022;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=1.720;SOR=0.818 GT:AD:DP:GQ:PL 1/1:1,119:120:99:2959,211,0
CP000253.1 1704832 . C T 6141.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6170,433,0
CP000253.1 1704895 . C T 5758.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7536;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,232:233:99:5787,406,0
CP000253.1 1704972 . A G 4860.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.561;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9082;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.43;ReadPosRankSum=1.028;SOR=1.030 GT:AD:DP:GQ:PL 1/1:2,169:171:99:4889,355,0
CP000253.1 1705017 . G T 3474.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.866;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1899;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.48;ReadPosRankSum=1.463;SOR=0.302 GT:AD:DP:GQ:PL 1/1:1,121:122:99:3503,253,0
CP000253.1 1705476 . C T 770.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.55;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,27:27:57:799,57,0
CP000253.1 1706905 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.64;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1707095 . T C 253.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.933;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.14;MQ0=0;MQRankSum=1.735;QD=18.13;ReadPosRankSum=1.623;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,13:14:21:282,21,0
CP000253.1 1707239 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.83;MQ0=4;QD=3.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:3:45,3,0
CP000253.1 1708140 . G T 3200.06 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5697;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.973 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3229,226,0
CP000253.1 1708506 . A T 5050.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.815;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7994;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.52;ReadPosRankSum=-0.135;SOR=0.308 GT:AD:DP:GQ:PL 1/1:1,205:206:99:5079,324,0
CP000253.1 1708557 . G A 4993.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,209:210:99:5022,355,0
CP000253.1 1708704 . G A 4338.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.641;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5033;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.14;ReadPosRankSum=-0.178;SOR=0.794 GT:AD:DP:GQ:PL 1/1:2,164:167:99:4367,271,0
CP000253.1 1709238 . G A 4076.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1750;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=1.231 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4105,292,0
CP000253.1 1709463 . G A 2500.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2529,175,0
CP000253.1 1709523 . T C 2347.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2376,163,0
CP000253.1 1710036 . A G 2967.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8719;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2996,214,0
CP000253.1 1710282 . T A 3654.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.733;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0581;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.56;ReadPosRankSum=1.333;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,142:144:99:3683,262,0
CP000253.1 1710366 . A G 3215.74 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,133:135:99:3244,229,0
CP000253.1 1711113 . T C 2208.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2237,157,0
CP000253.1 1711354 . A T 3010.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6071;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3039,217,0
CP000253.1 1712436 . T C 3640.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.654;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.47;ReadPosRankSum=-0.930;SOR=0.228 GT:AD:DP:GQ:PL 1/1:1,161:163:99:3669,259,0
CP000253.1 1713428 . C T 4545.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.928;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3432;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.11;ReadPosRankSum=0.756;SOR=0.271 GT:AD:DP:GQ:PL 1/1:1,180:182:99:4574,325,0
CP000253.1 1713500 . T A 5527.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.804;DP=230;Dels=0.00;ExcessHet=3.0103;FS=3.332;HaplotypeScore=23.6667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.14;ReadPosRankSum=0.552;SOR=0.481 GT:AD:DP:GQ:PL 1/1:1,228:230:99:5556,391,0
CP000253.1 1713706 . A T 4355.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,176:178:99:4384,307,0
CP000253.1 1716046 . C T 1146.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1175,81,0
CP000253.1 1716199 . A T 1604.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1633,114,0
CP000253.1 1716265 . A G 1371.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:56:99:1400,99,0
CP000253.1 1716317 . G A 1238.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.53;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:90:1267,90,0
CP000253.1 1716382 . A T 1680.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1345;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1709,123,0
CP000253.1 1716571 . C T 2785.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2814,196,0
CP000253.1 1716573 . C T 2758.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,120:121:99:2787,193,0
CP000253.1 1716678 . T G 2617.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2646,187,0
CP000253.1 1716688 . T C 2600.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6131;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2629,184,0
CP000253.1 1716697 . T C 2430.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8550;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2459,175,0
CP000253.1 1716775 . G A 2264.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.96;SOR=1.275 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2293,166,0
CP000253.1 1716811 . A T 1631.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.809;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5658;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.63;ReadPosRankSum=2.127;SOR=1.609 GT:AD:DP:GQ:PL 1/1:2,55:57:99:1660,120,0
CP000253.1 1716892 . T A 1057.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.4679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1086,78,0
CP000253.1 1716895 . C T 898.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.4679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:66:927,66,0
CP000253.1 1716897 . A G 995.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.4679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1024,72,0
CP000253.1 1716937 . A T 994.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1023,72,0
CP000253.1 1717132 . A G 967.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:69:996,69,0
CP000253.1 1717143 . C G 1028.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:72:1057,72,0
CP000253.1 1717185 . C T 933.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:40:66:962,66,0
CP000253.1 1717243 . A T 625.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5654;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:30:45:654,45,0
CP000253.1 1717311 . T C 859.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:60:888,60,0
CP000253.1 1717387 . A T 52.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0
CP000253.1 1717390 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717393 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717397 . C A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717402 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717407 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717408 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717409 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1717413 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717417 . A T 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 1717418 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717420 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717426 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717428 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717432 . T C 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1717435 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1717438 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717440 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717446 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1717459 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1717465 . A G 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1717476 . G C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717477 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717480 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717481 . C G 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 1717483 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1717486 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717510 . G C 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1717511 . T G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717512 . T A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1717513 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717520 . C T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1717524 . T G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717525 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717530 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717537 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717540 . C A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1717545 . G T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1717549 . T C 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 1717551 . A T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1717554 . C A 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 1717866 . C T 2683.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8475;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.32;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2712,190,0
CP000253.1 1717931 . C T 2907.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3150;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.07;SOR=1.047 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2936,208,0
CP000253.1 1717959 . A G 2813.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4608;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=0.000;QD=24.05;ReadPosRankSum=0.370;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,116:118:99:2842,202,0
CP000253.1 1718013 . A G 3249.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.832;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7530;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=0.000;QD=24.62;ReadPosRankSum=1.234;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,131:133:99:3278,232,0
CP000253.1 1718019 . T G 3056.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9984;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=23.16;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3085,220,0
CP000253.1 1718028 . G T 3560.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8410;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.43;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3589,253,0
CP000253.1 1718035 . T C 3553.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0559;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.57;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,139:141:99:3582,253,0
CP000253.1 1718040 . T C 3568.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8881;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.31;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,141:143:99:3597,256,0
CP000253.1 1718046 . G A 3647.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4522;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.69;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3676,262,0
CP000253.1 1718055 . T C 3801.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9721;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.01;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3830,271,0
CP000253.1 1718070 . G A 4084.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1994;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.53;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,160:161:99:4113,292,0
CP000253.1 1718253 . A T 4468.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8387;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4497,313,0
CP000253.1 1718361 . A G 2574.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2603,187,0
CP000253.1 1718370 . G A 1622.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1651,117,0
CP000253.1 1718424 . G A 1334.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1363,96,0
CP000253.1 1718522 . G T 2073.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2811;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=23.04;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2102,144,0
CP000253.1 1718535 . A T 2777.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7031;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=22.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2806,196,0
CP000253.1 1718619 . T C 3105.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=23.01;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3134,217,0
CP000253.1 1718733 . A T 2490.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1408;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2519,175,0
CP000253.1 1718899 . A G 292.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:321,24,0
CP000253.1 1718947 . T C 851.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,32:32:63:880,63,0
CP000253.1 1718979 . A T 1068.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,41:41:78:1097,78,0
CP000253.1 1718993 . T C 1051.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.97;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,39:40:78:1080,78,0
CP000253.1 1719004 . A G 680.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.326;DP=101;Dels=0.00;ExcessHet=3.0103;FS=5.173;HaplotypeScore=0.7887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.74;ReadPosRankSum=9.478;SOR=1.061 GT:AD:DP:GQ:PL 0/1:61,40:101:99:709,0,1136
CP000253.1 1719007 . A G 723.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.126;DP=101;Dels=0.00;ExcessHet=3.0103;FS=5.219;HaplotypeScore=0.7887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=7.17;ReadPosRankSum=9.478;SOR=1.061 GT:AD:DP:GQ:PL 0/1:61,40:101:99:752,0,1118
CP000253.1 1719011 . C T 1062.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.276;DP=101;Dels=0.00;ExcessHet=3.0103;FS=6.534;HaplotypeScore=0.7887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=10.52;ReadPosRankSum=-9.470;SOR=0.608 GT:AD:DP:GQ:PL 0/1:40,61:101:99:1091,0,656
CP000253.1 1719027 . C T 1184.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.913;DP=105;Dels=0.00;ExcessHet=3.0103;FS=5.223;HaplotypeScore=92.2140;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=11.28;ReadPosRankSum=-8.543;SOR=0.685 GT:AD:DP:GQ:PL 0/1:40,65:105:99:1213,0,584
CP000253.1 1719602 . A G 5255.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3632;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,222:223:99:5284,370,0
CP000253.1 1719776 . T C 2240.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2269,159,0
CP000253.1 1720007 . A G 1373.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1402,96,0
CP000253.1 1720046 . C T 1540.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5160;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:63:99:1569,108,0
CP000253.1 1720112 . G A 1267.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1296,90,0
CP000253.1 1720879 . T C 2085.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0677;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:91:99:2114,147,0
CP000253.1 1721057 . T C 871.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:63:900,63,0
CP000253.1 1721066 . C T 901.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:66:930,66,0
CP000253.1 1722009 . A G 994.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1023,72,0
CP000253.1 1722159 . A G 483.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:36:512,36,0
CP000253.1 1722192 . T C 564.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:593,42,0
CP000253.1 1722404 . C T 2474.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2503,172,0
CP000253.1 1722542 . G A 1917.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3479;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,81:82:99:1946,135,0
CP000253.1 1722651 . T C 2148.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2177,154,0
CP000253.1 1722851 . T C 1197.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:87:1226,87,0
CP000253.1 1722950 . A T 833.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:32:63:862,63,0
CP000253.1 1723034 . C T 1610.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5326;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1639,114,0
CP000253.1 1723035 . C T 1493.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:60:99:1522,108,0
CP000253.1 1723136 . T A 2575.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5625;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2604,181,0
CP000253.1 1723252 . G A 2967.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8635;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:130:99:2996,205,0
CP000253.1 1724523 . T C 2464.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2493,172,0
CP000253.1 1724592 . T C 2165.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2194,151,0
CP000253.1 1725375 . A C 271.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.817;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=46.90;MQ0=0;MQRankSum=-4.307;QD=13.59;ReadPosRankSum=-1.373;SOR=0.467 GT:AD:DP:GQ:PL 0/1:6,14:20:99:300,0,195
CP000253.1 1726336 . T C 2705.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.885;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.53;ReadPosRankSum=1.643;SOR=0.509 GT:AD:DP:GQ:PL 1/1:1,114:115:99:2734,190,0
CP000253.1 1726516 . G A 1065.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:75:1094,75,0
CP000253.1 1726644 . C T 594.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:623,42,0
CP000253.1 1726784 . T C 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 1726898 . A T 536.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:565,39,0
CP000253.1 1727989 . G A 553.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:42:582,42,0
CP000253.1 1728183 . A T 2199.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8123;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2228,154,0
CP000253.1 1728571 . A G 235.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:18:264,18,0
CP000253.1 1728586 . A G 274.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.14;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:303,21,0
CP000253.1 1728598 . A T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1728601 . C T 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 1728606 . C T 308.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:337,24,0
CP000253.1 1728940 . G A 3654.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7265;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3683,256,0
CP000253.1 1728948 . A G 3459.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4315;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.38;ReadPosRankSum=0.480;SOR=0.288 GT:AD:DP:GQ:PL 1/1:1,147:148:99:3488,244,0
CP000253.1 1729040 . T A 2322.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=0.131;SOR=0.404 GT:AD:DP:GQ:PL 1/1:1,92:93:99:2351,166,0
CP000253.1 1729076 . G A 1674.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1703,120,0
CP000253.1 1729096 . C T 1206.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:46:87:1235,87,0
CP000253.1 1729316 . G A 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 1729448 . A T 868.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:63:897,63,0
CP000253.1 1729946 . C T 2398.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2427,169,0
CP000253.1 1730018 . A G 1754.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5927;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1783,126,0
CP000253.1 1730105 . C A 1698.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1727,120,0
CP000253.1 1730108 . T A 1661.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1690,117,0
CP000253.1 1730113 . T C 1659.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1688,117,0
CP000253.1 1730117 . G T 1648.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1677,117,0
CP000253.1 1730120 . G A 1578.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1607,114,0
CP000253.1 1730122 . A T 1601.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1630,114,0
CP000253.1 1730123 . G T 1641.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1670,117,0
CP000253.1 1730126 . C T 1660.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1689,117,0
CP000253.1 1730135 . T G 1852.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1881,132,0
CP000253.1 1730137 . C T 1888.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1917,135,0
CP000253.1 1730153 . C T 1933.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1962,135,0
CP000253.1 1730261 . T C 1239.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.2566;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1268,87,0
CP000253.1 1730465 . C T 261.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:21:290,21,0
CP000253.1 1730584 . C T 578.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:607,42,0
CP000253.1 1730710 . T C 764.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:54:793,54,0
CP000253.1 1730974 . A G 2542.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2571,178,0
CP000253.1 1731258 . T C 2723.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.902;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2703;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.89;ReadPosRankSum=0.888;SOR=0.331 GT:AD:DP:GQ:PL 1/1:1,118:120:99:2752,190,0
CP000253.1 1731519 . T C 1446.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.92;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1475,102,0
CP000253.1 1732074 . A G 939.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:66:968,66,0
CP000253.1 1732605 . C T 490.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:519,36,0
CP000253.1 1732689 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1732977 . C T 1975.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2004,138,0
CP000253.1 1733205 . T C 2452.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8857;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2481,172,0
CP000253.1 1733515 . G T 3217.75 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3246,223,0
CP000253.1 1733572 . A G 2640.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2669,184,0
CP000253.1 1733943 . C T 1028.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.387 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1057,75,0
CP000253.1 1733952 . T G 905.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=1.418 GT:AD:DP:GQ:PL 1/1:0,34:34:66:934,66,0
CP000253.1 1733992 . G A 1115.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6819;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=1.154 GT:AD:DP:GQ:PL 1/1:0,45:46:84:1144,84,0
CP000253.1 1734087 . C T 1861.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1890,132,0
CP000253.1 1734102 . T C 2037.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6889;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2066,144,0
CP000253.1 1734133 . A G 2599.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0629;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2628,184,0
CP000253.1 1734147 . T C 2496.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.849;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1684;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.78;ReadPosRankSum=-0.314;SOR=0.472 GT:AD:DP:GQ:PL 1/1:1,104:107:99:2525,175,0
CP000253.1 1734840 . C T 3182.76 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.486;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.97;ReadPosRankSum=2.305;SOR=0.187 GT:AD:DP:GQ:PL 1/1:2,116:118:99:3211,232,0
CP000253.1 1735538 . T C 1810.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1839,126,0
CP000253.1 1736085 . C T 3023.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3052,211,0
CP000253.1 1736313 . T A 1930.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2517;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1959,138,0
CP000253.1 1736481 . C T 3613.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2158;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3642,250,0
CP000253.1 1736520 . A C 3398.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.969;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.93;ReadPosRankSum=-1.330;SOR=0.337 GT:AD:DP:GQ:PL 1/1:1,141:142:99:3427,241,0
CP000253.1 1736524 . C G 3328.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3357,235,0
CP000253.1 1736628 . G A 2121.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2420;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2150,151,0
CP000253.1 1736673 . A C 1523.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.40;ReadPosRankSum=-0.867;SOR=0.418 GT:AD:DP:GQ:PL 1/1:1,59:60:99:1552,111,0
CP000253.1 1736686 . G A 1514.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.54;SOR=1.262 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1543,111,0
CP000253.1 1737095 . T C 3670.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.664;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2264;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.80;ReadPosRankSum=-1.022;SOR=0.838 GT:AD:DP:GQ:PL 1/1:2,146:148:99:3699,259,0
CP000253.1 1737131 . C T 2977.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5020;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=1.035 GT:AD:DP:GQ:PL 1/1:0,113:114:99:3006,214,0
CP000253.1 1737148 . T A 2794.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.837;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.37;ReadPosRankSum=1.324;SOR=0.364 GT:AD:DP:GQ:PL 1/1:1,105:107:99:2823,202,0
CP000253.1 1737162 . A G 2612.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2500;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2641,187,0
CP000253.1 1737248 . T C 1418.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1447,105,0
CP000253.1 1737421 . A G 2616.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.57;ReadPosRankSum=1.733;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,110:111:99:2645,187,0
CP000253.1 1738174 . G A 1698.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1727,123,0
CP000253.1 1738246 . A T 2534.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=1.037 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2563,181,0
CP000253.1 1738272 . A T 2797.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7550;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2826,199,0
CP000253.1 1738479 . C T 5102.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,205:206:99:5131,361,0
CP000253.1 1738577 . T A 4752.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4781,340,0
CP000253.1 1738631 . G A 5128.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.801;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.1173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.66;ReadPosRankSum=0.683;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,207:208:99:5157,364,0
CP000253.1 1738725 . C T 4733.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5179;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,193:195:99:4762,331,0
CP000253.1 1738776 . T A 4768.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.846;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8575;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.61;ReadPosRankSum=-0.172;SOR=0.467 GT:AD:DP:GQ:PL 1/1:1,201:203:99:4797,331,0
CP000253.1 1739650 . A T 1759.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1788,126,0
CP000253.1 1740779 . C T 741.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,30:30:54:770,54,0
CP000253.1 1741035 . T G 1281.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.846;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.18;ReadPosRankSum=0.374;SOR=0.452 GT:AD:DP:GQ:PL 1/1:2,51:53:93:1310,93,0
CP000253.1 1741210 . G A 831.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0126;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:60:860,60,0
CP000253.1 1741472 . A G 3441.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.732;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.58;ReadPosRankSum=-1.361;SOR=0.324 GT:AD:DP:GQ:PL 1/1:1,139:140:99:3470,247,0
CP000253.1 1741573 . A C 3707.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.865;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.77;ReadPosRankSum=1.488;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,155:157:99:3736,262,0
CP000253.1 1741993 . A G 2752.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.519;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4277;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.53;ReadPosRankSum=2.346;SOR=0.198 GT:AD:DP:GQ:PL 1/1:2,115:117:99:2781,196,0
CP000253.1 1742407 . T G 480.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:23:39:509,39,0
CP000253.1 1742476 . T A 576.79 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.211;DP=25;Dels=0.00;ExcessHet=3.0103;FS=3.188;HaplotypeScore=5.5308;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.07;ReadPosRankSum=-0.766;SOR=0.477 GT:AD:DP:GQ:PL 1/1:1,24:25:23:605,23,0
CP000253.1 1742582 . A G 901.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:66:930,66,0
CP000253.1 1742642 . G A 923.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:38:66:952,66,0
CP000253.1 1742678 . G A 918.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:40:66:947,66,0
CP000253.1 1742762 . A T 1100.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.02;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:78:1129,78,0
CP000253.1 1742990 . G A 309.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:14:24:338,24,0
CP000253.1 1744845 . G T 3154.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7478;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3183,217,0
CP000253.1 1745525 . A G 5234.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,219:220:99:5263,370,0
CP000253.1 1746646 . G A 928.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:957,66,0
CP000253.1 1746959 . C T 481.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:22:36:510,36,0
CP000253.1 1746961 . A G 525.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.91;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:554,39,0
CP000253.1 1747030 . A T 686.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:31:51:715,51,0
CP000253.1 1747251 . A C 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 1747382 . C T 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 1747394 . T C 184.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:213,15,0
CP000253.1 1747735 . T G 1247.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:93:1276,93,0
CP000253.1 1747736 . T C 1225.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.749;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.02;ReadPosRankSum=1.592;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,48:49:90:1254,90,0
CP000253.1 1747737 . C A 1222.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.949;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=1.450;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,48:49:90:1251,90,0
CP000253.1 1747791 . A C 1958.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.59;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1987,141,0
CP000253.1 1747881 . T C 2165.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2194,154,0
CP000253.1 1748255 . G A 3347.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.891;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0143;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.58;ReadPosRankSum=-0.952;SOR=0.430 GT:AD:DP:GQ:PL 1/1:1,141:142:99:3376,235,0
CP000253.1 1748529 . T C 2187.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2216,157,0
CP000253.1 1748691 . T C 1971.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.849;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1775;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.61;ReadPosRankSum=0.744;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,76:77:99:2000,141,0
CP000253.1 1748805 . T G 4263.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7762;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,167:168:99:4292,301,0
CP000253.1 1748946 . T C 5183.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7724;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,220:220:99:5212,361,0
CP000253.1 1748954 . T C 5098.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.016;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.72;ReadPosRankSum=1.144;SOR=0.436 GT:AD:DP:GQ:PL 1/1:1,214:215:99:5127,352,0
CP000253.1 1748958 . T A 5004.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,215:215:99:5033,349,0
CP000253.1 1749248 . T C 2951.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9278;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.80;ReadPosRankSum=1.453;SOR=0.570 GT:AD:DP:GQ:PL 1/1:1,123:125:99:2980,211,0
CP000253.1 1749282 . G T 2991.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7910;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3020,211,0
CP000253.1 1749316 . A G 2846.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=1.106 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2875,205,0
CP000253.1 1749325 . A G 2805.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.24;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2834,202,0
CP000253.1 1749367 . A T 2616.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=1.145 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2645,187,0
CP000253.1 1749417 . T C 1795.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.764;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.41;ReadPosRankSum=1.174;SOR=0.521 GT:AD:DP:GQ:PL 1/1:1,67:68:99:1824,132,0
CP000253.1 1749603 . C T 3347.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3376,235,0
CP000253.1 1749636 . C T 3774.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8175;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3803,265,0
CP000253.1 1749874 . T A 4365.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8386;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,187:188:99:4394,304,0
CP000253.1 1749877 . G A 4411.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2425;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,188:188:99:4440,307,0
CP000253.1 1749919 . G T 4523.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,191:192:99:4552,316,0
CP000253.1 1749993 . T C 3648.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7214;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=1.125 GT:AD:DP:GQ:PL 1/1:0,147:148:99:3677,259,0
CP000253.1 1750217 . T A 225.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:254,18,0
CP000253.1 1750264 . G A 440.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:33:469,33,0
CP000253.1 1750330 . T G 573.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:602,42,0
CP000253.1 1751143 . G A 1699.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2500;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1728,123,0
CP000253.1 1751352 . T A 1830.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1859,135,0
CP000253.1 1751387 . C G 1659.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.725;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7130;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.77;ReadPosRankSum=1.681;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,66:68:99:1688,120,0
CP000253.1 1751622 . C T 2706.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2735,190,0
CP000253.1 1751652 . G A 2830.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0434;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,116:117:99:2859,199,0
CP000253.1 1751676 . G T 3016.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3045,214,0
CP000253.1 1752276 . C A 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 1752383 . T A 170.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.48;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:199,15,0
CP000253.1 1752442 . T C 504.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.04;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,18:18:42:533,42,0
CP000253.1 1752702 . T A 2763.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,115:116:99:2792,196,0
CP000253.1 1753075 . C A 2683.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5061;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.08;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2712,193,0
CP000253.1 1753408 . C T 3017.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,129:131:99:3046,217,0
CP000253.1 1753756 . T C 5882.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3616;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=23.82;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,247:249:99:5911,412,0
CP000253.1 1754049 . G A 1905.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5994;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,77:78:99:1934,135,0
CP000253.1 1754110 . G A 1538.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1567,108,0
CP000253.1 1754500 . C T 2344.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2373,166,0
CP000253.1 1754569 . A G 3009.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3038,208,0
CP000253.1 1754629 . C G 2649.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,116:117:99:2678,184,0
CP000253.1 1754694 . G C 2619.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7724;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,111:114:99:2648,187,0
CP000253.1 1754754 . A T 2407.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0166;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.947 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2436,172,0
CP000253.1 1754769 . G A 2246.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8093;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2275,160,0
CP000253.1 1754803 . A G 1771.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1800,126,0
CP000253.1 1754823 . A T 1521.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1550,108,0
CP000253.1 1754991 . C T 1733.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6492;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1762,123,0
CP000253.1 1755251 . A G 2285.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9970;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2314,163,0
CP000253.1 1755678 . A G 2949.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5775;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,122:123:99:2978,208,0
CP000253.1 1755711 . G A 2887.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3206;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=23.67;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2916,205,0
CP000253.1 1755951 . T C 594.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:623,45,0
CP000253.1 1756646 . G A 4892.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6327;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,211:211:99:4921,337,0
CP000253.1 1757557 . T C 244.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.25;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:273,21,0
CP000253.1 1758625 . T A 1489.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1518,105,0
CP000253.1 1758685 . A G 1171.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:50:84:1200,84,0
CP000253.1 1758691 . A G 1074.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1103,78,0
CP000253.1 1758733 . G A 504.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.95;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:533,36,0
CP000253.1 1758760 . A T 532.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.31;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:561,39,0
CP000253.1 1758772 . G A 583.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.46;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:42:612,42,0
CP000253.1 1758787 . A G 589.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:42:618,42,0
CP000253.1 1758793 . G A 579.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.47;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:42:608,42,0
CP000253.1 1758820 . A G 707.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:51:736,51,0
CP000253.1 1758835 . A G 739.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:54:768,54,0
CP000253.1 1758862 . T C 643.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:48:672,48,0
CP000253.1 1758904 . G A 615.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:644,45,0
CP000253.1 1758928 . T G 576.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:42:605,42,0
CP000253.1 1758972 . C T 313.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:14:24:342,24,0
CP000253.1 1758983 . T G 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 1759144 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 1759373 . C T 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 1759374 . A G 269.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:298,21,0
CP000253.1 1759375 . T A 274.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:303,21,0
CP000253.1 1759376 . T G 275.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:304,21,0
CP000253.1 1759378 . A G 312.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:341,24,0
CP000253.1 1759388 . A G 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 1759417 . A G 496.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:525,36,0
CP000253.1 1759477 . C A 530.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:559,39,0
CP000253.1 1759507 . A G 488.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:20:36:517,36,0
CP000253.1 1759530 . A G 402.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:431,30,0
CP000253.1 1759619 . T A 348.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:27:377,27,0
CP000253.1 1759699 . T A 714.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:743,51,0
CP000253.1 1759708 . C T 653.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:48:682,48,0
CP000253.1 1759802 . G A 786.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:57:815,57,0
CP000253.1 1760282 . A G 4122.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2162;MLEAC=2;MLEAF=1.00;MQ=58.67;MQ0=0;QD=25.29;SOR=1.144 GT:AD:DP:GQ:PL 1/1:0,163:164:99:4151,301,0
CP000253.1 1760351 . A G 3396.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.0929;MLEAC=2;MLEAF=1.00;MQ=56.33;MQ0=3;QD=24.79;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,137:140:99:3425,253,0
CP000253.1 1760490 . C T 1156.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.220;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.1623;MLEAC=1;MLEAF=0.500;MQ=44.78;MQ0=9;MQRankSum=3.665;QD=15.02;ReadPosRankSum=2.352;SOR=0.214 GT:AD:DP:GQ:PL 0/1:15,62:78:54:1185,0,54
CP000253.1 1760509 . T C 536.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.304;DP=79;Dels=0.00;ExcessHet=3.0103;FS=1.999;HaplotypeScore=27.4663;MLEAC=1;MLEAF=0.500;MQ=40.07;MQ0=9;MQRankSum=2.559;QD=7.06;ReadPosRankSum=4.303;SOR=0.976 GT:AD:DP:GQ:PL 0/1:39,37:79:99:565,0,690
CP000253.1 1760512 . A G 583.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.248;DP=77;Dels=0.00;ExcessHet=3.0103;FS=2.323;HaplotypeScore=27.2398;MLEAC=1;MLEAF=0.500;MQ=39.46;MQ0=9;MQRankSum=1.122;QD=7.89;ReadPosRankSum=5.151;SOR=1.076 GT:AD:DP:GQ:PL 0/1:35,39:77:99:612,0,640
CP000253.1 1760548 . C T 356.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.648;DP=84;Dels=0.01;ExcessHet=3.0103;FS=1.118;HaplotypeScore=23.3222;MLEAC=1;MLEAF=0.500;MQ=39.31;MQ0=14;MQRankSum=-0.411;QD=4.30;ReadPosRankSum=-2.670;SOR=1.066 GT:AD:DP:GQ:PL 0/1:55,28:83:99:385,0,886
CP000253.1 1760561 . G A 161.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.816;DP=82;Dels=0.00;ExcessHet=3.0103;FS=6.465;HaplotypeScore=19.2733;MLEAC=1;MLEAF=0.500;MQ=40.28;MQ0=14;MQRankSum=-1.560;QD=2.07;ReadPosRankSum=-2.229;SOR=1.752 GT:AD:DP:GQ:PL 0/1:60,18:82:99:190,0,1065
CP000253.1 1760566 . C T 160.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.233;DP=81;Dels=0.00;ExcessHet=3.0103;FS=2.786;HaplotypeScore=20.0780;MLEAC=1;MLEAF=0.500;MQ=40.78;MQ0=14;MQRankSum=-0.880;QD=1.98;ReadPosRankSum=-2.694;SOR=1.172 GT:AD:DP:GQ:PL 0/1:66,15:81:99:189,0,1075
CP000253.1 1760668 . T C 2280.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.152;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7462;MLEAC=2;MLEAF=1.00;MQ=50.02;MQ0=12;MQRankSum=1.207;QD=20.01;ReadPosRankSum=1.551;SOR=0.133 GT:AD:DP:GQ:PL 1/1:6,108:115:99:2309,169,0
CP000253.1 1760671 . A G 2169.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.186;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8789;MLEAC=2;MLEAF=1.00;MQ=50.02;MQ0=12;MQRankSum=2.821;QD=19.20;ReadPosRankSum=0.866;SOR=0.159 GT:AD:DP:GQ:PL 1/1:2,111:115:99:2198,163,0
CP000253.1 1760677 . C T 2493.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7739;MLEAC=2;MLEAF=1.00;MQ=50.51;MQ0=12;QD=21.31;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2522,184,0
CP000253.1 1760707 . C T 2438.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.595;DP=117;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.3497;MLEAC=2;MLEAF=1.00;MQ=52.86;MQ0=8;MQRankSum=2.194;QD=21.02;ReadPosRankSum=1.123;SOR=0.339 GT:AD:DP:GQ:PL 1/1:1,115:116:99:2467,178,0
CP000253.1 1760720 . G A 2186.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.329;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.9692;MLEAC=2;MLEAF=1.00;MQ=53.48;MQ0=7;MQRankSum=0.892;QD=19.70;ReadPosRankSum=-0.410;SOR=0.221 GT:AD:DP:GQ:PL 1/1:5,106:115:99:2215,166,0
CP000253.1 1760725 . C T 2435.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.534;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=43.3036;MLEAC=2;MLEAF=1.00;MQ=53.48;MQ0=7;MQRankSum=2.205;QD=21.37;ReadPosRankSum=-0.858;SOR=0.351 GT:AD:DP:GQ:PL 1/1:1,113:115:99:2464,178,0
CP000253.1 1760732 . A G 2229.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.962;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=57.6635;MLEAC=2;MLEAF=1.00;MQ=54.59;MQ0=4;MQRankSum=-0.696;QD=20.84;ReadPosRankSum=-0.048;SOR=0.158 GT:AD:DP:GQ:PL 1/1:2,105:110:99:2258,169,0
CP000253.1 1760733 . C A 1840.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.429;DP=110;Dels=0.00;ExcessHet=3.0103;FS=2.078;HaplotypeScore=60.3457;MLEAC=2;MLEAF=1.00;MQ=54.59;MQ0=4;MQRankSum=-0.502;QD=17.37;ReadPosRankSum=-1.780;SOR=0.098 GT:AD:DP:GQ:PL 1/1:8,98:110:86:1869,86,0
CP000253.1 1760743 . T C 2198.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.364;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=51.7806;MLEAC=2;MLEAF=1.00;MQ=54.93;MQ0=4;MQRankSum=0.188;QD=19.81;ReadPosRankSum=-0.244;SOR=0.227 GT:AD:DP:GQ:PL 1/1:5,106:111:99:2227,163,0
CP000253.1 1760748 . T C 2447.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.665;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.6373;MLEAC=2;MLEAF=1.00;MQ=55.82;MQ0=4;MQRankSum=-0.419;QD=23.09;ReadPosRankSum=-1.121;SOR=0.717 GT:AD:DP:GQ:PL 1/1:1,105:106:99:2476,178,0
CP000253.1 1761902 . T C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1762089 . C T 3081.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3110,211,0
CP000253.1 1763702 . C T 6425.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3207;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,244:244:99:6454,457,0
CP000253.1 1763732 . T C 6060.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,237:237:99:6089,433,0
CP000253.1 1764023 . A G 1555.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4286;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,64:65:99:1584,114,0
CP000253.1 1764652 . T G 4955.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,205:205:99:4984,349,0
CP000253.1 1764665 . T A 5123.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,212:213:99:5152,361,0
CP000253.1 1764667 . A G 5115.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5263;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,216:217:99:5144,364,0
CP000253.1 1764824 . A G 5372.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,220:222:99:5401,376,0
CP000253.1 1764858 . A G 5207.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6901;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,212:213:99:5236,364,0
CP000253.1 1764983 . A G 1691.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.29;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1720,126,0
CP000253.1 1765018 . T C 1629.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.10;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1658,120,0
CP000253.1 1765035 . A T 1603.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.64;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1632,120,0
CP000253.1 1765037 . T G 1695.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.733;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.92;ReadPosRankSum=-1.293;SOR=0.346 GT:AD:DP:GQ:PL 1/1:1,62:63:99:1724,126,0
CP000253.1 1765055 . C T 2340.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.883;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.54;ReadPosRankSum=-1.122;SOR=0.364 GT:AD:DP:GQ:PL 1/1:1,84:85:99:2369,169,0
CP000253.1 1765285 . T G 5785.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.563;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6207;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.01;ReadPosRankSum=-0.362;SOR=0.701 GT:AD:DP:GQ:PL 1/1:2,239:241:99:5814,409,0
CP000253.1 1765326 . T C 5501.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.875;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.0449;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.34;ReadPosRankSum=1.272;SOR=0.323 GT:AD:DP:GQ:PL 1/1:1,225:227:99:5530,388,0
CP000253.1 1765327 . T C 5503.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.880;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.8904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=0.294;SOR=0.324 GT:AD:DP:GQ:PL 1/1:1,223:225:99:5532,385,0
CP000253.1 1765362 . C T 5054.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5083,355,0
CP000253.1 1765439 . T A 4179.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3701;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,159:160:99:4208,301,0
CP000253.1 1765462 . A G 4095.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5315;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,153:154:99:4124,295,0
CP000253.1 1766521 . G A 684.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2923;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:713,51,0
CP000253.1 1768592 . G A 1075.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6421;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:75:1104,75,0
CP000253.1 1768664 . T A 1220.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.20;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:84:1249,84,0
CP000253.1 1768694 . A C 1164.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2183;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:81:1193,81,0
CP000253.1 1768733 . A G 1199.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:84:1228,84,0
CP000253.1 1769214 . G A 856.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.653;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.42;ReadPosRankSum=1.735;SOR=0.289 GT:AD:DP:GQ:PL 1/1:1,39:40:28:885,28,0
CP000253.1 1769331 . A G 1125.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.245;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.24;ReadPosRankSum=-1.537;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,52:55:46:1154,46,0
CP000253.1 1769922 . G A 1476.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,58:59:99:1505,105,0
CP000253.1 1770519 . A T 570.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8249;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,22:22:42:599,42,0
CP000253.1 1770617 . T C 1619.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1648,117,0
CP000253.1 1770880 . A G 3441.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4613;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,142:144:99:3470,247,0
CP000253.1 1771041 . T C 2887.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4242;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2916,214,0
CP000253.1 1771212 . T C 2600.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,108:109:99:2629,184,0
CP000253.1 1771398 . T C 1093.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.34;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,40:40:81:1122,81,0
CP000253.1 1771448 . G A 486.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:515,36,0
CP000253.1 1771660 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1771765 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1771769 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1771871 . C T 227.79 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2930;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;QD=22.78;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:11:18:252,18,0
CP000253.1 1771873 . C T 289.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4609;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:318,24,0
CP000253.1 1772449 . G T 1455.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1484,102,0
CP000253.1 1773473 . A T 1273.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.59;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:59:90:1302,90,0
CP000253.1 1773953 . C T 1669.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1698,117,0
CP000253.1 1776404 . T C 796.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.27;MQ0=0;QD=24.14;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:57:825,57,0
CP000253.1 1776459 . T C 709.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.89;MQ0=0;QD=24.47;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:51:738,51,0
CP000253.1 1776477 . T C 658.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.993;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=56.65;MQ0=0;MQRankSum=-0.313;QD=24.40;ReadPosRankSum=1.099;SOR=0.970 GT:AD:DP:GQ:PL 1/1:1,26:27:48:687,48,0
CP000253.1 1776496 . A G 659.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.65;MQ0=0;QD=24.44;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:48:688,48,0
CP000253.1 1776542 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=16.35;MQ0=1;QD=3.10;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,6:6:3:45,3,0
CP000253.1 1776565 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=16.35;MQ0=1;QD=3.10;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,6:6:3:45,3,0
CP000253.1 1776621 . G A 35.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.372;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1159;MLEAC=1;MLEAF=0.500;MQ=38.20;MQ0=3;MQRankSum=-1.164;QD=1.49;ReadPosRankSum=-0.365;SOR=0.582 GT:AD:DP:GQ:PL 0/1:18,6:24:64:64,0,220
CP000253.1 1776669 . A G 268.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.636;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1300;MLEAC=2;MLEAF=1.00;MQ=43.92;MQ0=2;MQRankSum=3.182;QD=14.93;ReadPosRankSum=2.365;SOR=0.693 GT:AD:DP:GQ:PL 1/1:6,12:18:21:297,21,0
CP000253.1 1776869 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1776889 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1777162 . T C 101.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:129,9,0
CP000253.1 1778088 . A G 2045.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2074,141,0
CP000253.1 1779937 . A G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1779955 . A C 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 1781147 . A T 4665.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6522;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4694,328,0
CP000253.1 1781237 . G A 2869.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,112:113:99:2898,205,0
CP000253.1 1781438 . A T 1038.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6812;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1067,75,0
CP000253.1 1781451 . G A 1117.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1146,81,0
CP000253.1 1781517 . A T 945.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:38:69:974,69,0
CP000253.1 1782542 . T A 2321.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0146;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:103:99:2350,166,0
CP000253.1 1782751 . T C 1042.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.97;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:78:1071,78,0
CP000253.1 1783196 . T A 4552.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.527;DP=195;Dels=0.00;ExcessHet=3.0103;FS=3.358;HaplotypeScore=26.4756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.35;ReadPosRankSum=1.155;SOR=0.493 GT:AD:DP:GQ:PL 1/1:1,194:195:99:4581,324,0
CP000253.1 1783368 . C G 5843.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.7382;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,235:238:99:5872,418,0
CP000253.1 1783474 . C T 6492.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8403;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=27.40;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,237:238:99:6521,470,0
CP000253.1 1783477 . T C 6469.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0795;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=0.000;QD=27.07;ReadPosRankSum=-0.218;SOR=0.283 GT:AD:DP:GQ:PL 1/1:1,238:240:99:6498,472,0
CP000253.1 1783486 . C T 6603.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.6073;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=26.63;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6632,476,0
CP000253.1 1783503 . C A 6393.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.508;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6008;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=-0.045;QD=25.99;ReadPosRankSum=0.260;SOR=0.814 GT:AD:DP:GQ:PL 1/1:2,244:248:99:6422,464,0
CP000253.1 1783565 . C A 6290.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3132;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.21;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6319,454,0
CP000253.1 1783574 . A T 6440.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3494;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.18;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6469,461,0
CP000253.1 1783580 . G T 6490.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8297;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.49;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,245:245:99:6519,464,0
CP000253.1 1783581 . C T 6491.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7677;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.61;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,244:245:99:6520,464,0
CP000253.1 1783592 . T C 6472.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1983;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=25.89;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6501,469,0
CP000253.1 1783607 . A T 6411.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7722;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.39;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,243:243:99:6440,455,0
CP000253.1 1783640 . G T 6532.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8065;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.56;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6561,467,0
CP000253.1 1783648 . T C 6199.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.677;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8672;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;MQRankSum=0.000;QD=26.38;ReadPosRankSum=0.575;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,234:236:99:6228,419,0
CP000253.1 1783649 . C T 6312.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8714;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;QD=26.75;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,236:236:99:6341,448,0
CP000253.1 1784089 . T G 4725.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.437;DP=173;Dels=0.00;ExcessHet=3.0103;FS=2.462;HaplotypeScore=18.9080;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;MQRankSum=-0.157;QD=27.48;ReadPosRankSum=0.866;SOR=0.967 GT:AD:DP:GQ:PL 1/1:3,169:173:99:4754,313,0
CP000253.1 1784782 . G A 4075.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4104,295,0
CP000253.1 1784950 . T G 4095.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4124,292,0
CP000253.1 1784981 . C A 3864.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.416;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8070;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.056;QD=23.86;ReadPosRankSum=0.698;SOR=0.139 GT:AD:DP:GQ:PL 1/1:2,160:163:99:3893,280,0
CP000253.1 1784997 . A G 4078.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1398;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.33;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4107,292,0
CP000253.1 1785007 . T C 3816.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6226;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=24.95;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3845,274,0
CP000253.1 1785041 . T A 3988.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.661;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2990;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=24.62;ReadPosRankSum=-1.305;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,161:164:99:4017,289,0
CP000253.1 1785425 . C T 4664.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,171:172:99:4693,337,0
CP000253.1 1785458 . G A 5436.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3545;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.02;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,194:196:99:5465,391,0
CP000253.1 1785544 . T C 5710.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.926;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6865;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.27;ReadPosRankSum=0.621;SOR=0.234 GT:AD:DP:GQ:PL 1/1:1,225:227:99:5739,403,0
CP000253.1 1785706 . T G 6181.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.600;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.255;HaplotypeScore=13.1648;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.73;ReadPosRankSum=0.589;SOR=0.309 GT:AD:DP:GQ:PL 1/1:2,248:250:99:6210,408,0
CP000253.1 1785713 . A T 6233.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.663;DP=246;Dels=0.00;ExcessHet=3.0103;FS=3.251;HaplotypeScore=24.2713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.44;ReadPosRankSum=0.035;SOR=0.437 GT:AD:DP:GQ:PL 1/1:1,244:246:99:6262,420,0
CP000253.1 1785716 . T C 6169.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.367;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2619;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.88;ReadPosRankSum=0.346;SOR=0.831 GT:AD:DP:GQ:PL 1/1:2,246:248:99:6198,381,0
CP000253.1 1785765 . G A 6142.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.445;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.14;ReadPosRankSum=-0.073;SOR=0.755 GT:AD:DP:GQ:PL 1/1:2,233:236:99:6171,407,0
CP000253.1 1786216 . A C 2977.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0733;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=1.169 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3006,214,0
CP000253.1 1786280 . G A 2467.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2496,175,0
CP000253.1 1786285 . G T 2498.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=1.076 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2527,178,0
CP000253.1 1786289 . C A 2506.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.099 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2535,181,0
CP000253.1 1786293 . C T 2209.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2238,157,0
CP000253.1 1786313 . C T 2087.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2116,147,0
CP000253.1 1786340 . A G 2001.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2030,141,0
CP000253.1 1786346 . G A 2023.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5423;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2052,144,0
CP000253.1 1786352 . T C 1938.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1967,141,0
CP000253.1 1786391 . A T 1655.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7523;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1684,117,0
CP000253.1 1786424 . T A 1103.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1132,78,0
CP000253.1 1786429 . C G 1024.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:72:1053,72,0
CP000253.1 1786439 . G A 1057.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1086,75,0
CP000253.1 1786463 . C T 840.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:869,60,0
CP000253.1 1786472 . C A 840.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:60:869,60,0
CP000253.1 1786475 . G A 971.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:69:1000,69,0
CP000253.1 1786502 . C T 1244.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:87:1273,87,0
CP000253.1 1786511 . T A 1245.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:87:1274,87,0
CP000253.1 1786517 . T C 1164.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1193,84,0
CP000253.1 1786520 . T C 1180.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1209,84,0
CP000253.1 1786526 . T C 1183.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1212,84,0
CP000253.1 1786527 . C T 1185.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1214,84,0
CP000253.1 1786535 . G C 1241.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1270,87,0
CP000253.1 1786537 . G A 1240.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1269,87,0
CP000253.1 1786553 . A T 1381.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1410,99,0
CP000253.1 1786555 . G A 1339.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1368,96,0
CP000253.1 1786565 . A C 1385.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1414,99,0
CP000253.1 1786571 . T A 1393.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1422,99,0
CP000253.1 1786572 . G C 1375.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1404,99,0
CP000253.1 1786576 . T A 1348.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1377,96,0
CP000253.1 1786583 . T A 1351.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1380,96,0
CP000253.1 1786607 . A T 1410.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=59.69;MQ0=0;QD=23.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1439,99,0
CP000253.1 1786613 . T C 1412.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.69;MQ0=0;QD=23.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1441,99,0
CP000253.1 1786616 . T C 1412.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.69;MQ0=0;QD=23.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1441,99,0
CP000253.1 1786625 . T C 1292.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=59.66;MQ0=0;QD=23.50;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1321,90,0
CP000253.1 1786628 . A C 1185.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.63;MQ0=0;QD=23.25;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1214,84,0
CP000253.1 1786634 . C A 1143.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.62;MQ0=0;QD=23.34;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1172,81,0
CP000253.1 1786636 . T A 1156.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.62;MQ0=0;QD=23.61;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1185,81,0
CP000253.1 1786643 . A C 1189.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.63;MQ0=0;QD=23.33;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1218,84,0
CP000253.1 1786645 . C T 1198.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.63;MQ0=0;QD=23.51;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1227,84,0
CP000253.1 1786652 . G A 1192.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.63;MQ0=0;QD=23.39;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1221,84,0
CP000253.1 1786661 . G A 1286.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=23.83;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:90:1315,90,0
CP000253.1 1786662 . T C 1247.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=23.11;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1276,87,0
CP000253.1 1786664 . A G 1279.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=23.70;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:90:1308,90,0
CP000253.1 1786688 . A G 1409.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6812;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;QD=23.11;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1438,99,0
CP000253.1 1786691 . G A 1338.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.65;MQ0=0;QD=23.49;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1367,93,0
CP000253.1 1786694 . C A 1373.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.67;MQ0=0;QD=23.28;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:96:1402,96,0
CP000253.1 1786703 . A T 1386.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;QD=22.73;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:96:1415,96,0
CP000253.1 1786706 . A C 1382.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.947;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;MQRankSum=-0.239;QD=22.67;ReadPosRankSum=1.170;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,60:61:96:1411,96,0
CP000253.1 1786726 . G T 1203.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=23.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1232,84,0
CP000253.1 1786736 . G A 1054.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=23.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:45:75:1083,75,0
CP000253.1 1786741 . T C 1020.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:43:72:1049,72,0
CP000253.1 1786747 . C T 663.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:692,48,0
CP000253.1 1786748 . T A 666.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:695,48,0
CP000253.1 1786750 . G A 667.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:696,48,0
CP000253.1 1786751 . A T 665.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:694,48,0
CP000253.1 1786760 . A G 654.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:683,48,0
CP000253.1 1786761 . G A 657.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:686,48,0
CP000253.1 1786763 . A G 662.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:691,48,0
CP000253.1 1786784 . T A 1189.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:49:84:1218,84,0
CP000253.1 1786790 . T G 1192.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1221,84,0
CP000253.1 1786793 . A T 1234.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1263,87,0
CP000253.1 1786799 . C T 1260.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1289,90,0
CP000253.1 1786811 . T A 1446.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.63;MQ0=0;QD=24.52;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1475,102,0
CP000253.1 1786814 . T A 1481.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=24.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1510,105,0
CP000253.1 1786820 . T G 1556.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.66;MQ0=0;QD=24.71;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1585,111,0
CP000253.1 1786823 . A T 1546.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.66;MQ0=0;QD=24.55;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1575,111,0
CP000253.1 1786845 . A T 1522.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1551,108,0
CP000253.1 1786847 . A G 1535.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1564,108,0
CP000253.1 1786853 . T C 1522.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1551,108,0
CP000253.1 1786856 . C A 1531.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1560,108,0
CP000253.1 1786865 . A T 1472.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1501,105,0
CP000253.1 1786868 . T A 1417.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1446,102,0
CP000253.1 1786871 . G A 1441.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1470,102,0
CP000253.1 1786874 . A T 1435.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1464,102,0
CP000253.1 1786887 . C T 1505.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:61:99:1534,108,0
CP000253.1 1786888 . T C 1518.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1547,108,0
CP000253.1 1786898 . G A 1733.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1762,123,0
CP000253.1 1786904 . A G 1573.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1602,111,0
CP000253.1 1786908 . T C 1567.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1596,111,0
CP000253.1 1786943 . G A 1497.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1526,105,0
CP000253.1 1787099 . A T 312.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:27:341,27,0
CP000253.1 1787108 . T C 322.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.34;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:27:351,27,0
CP000253.1 1787120 . A G 367.77 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.43;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:30:396,30,0
CP000253.1 1787123 . G A 331.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.16;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:27:360,27,0
CP000253.1 1787138 . C T 458.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.58;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:36:487,36,0
CP000253.1 1787153 . T A 418.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:33:447,33,0
CP000253.1 1787155 . C A 508.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.93;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:39:537,39,0
CP000253.1 1787159 . C T 445.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:36:474,36,0
CP000253.1 1787162 . G A 490.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.87;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:39:519,39,0
CP000253.1 1787165 . A T 510.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.05;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:39:539,39,0
CP000253.1 1787177 . G A 808.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.96;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:60:837,60,0
CP000253.1 1787183 . G A 939.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:72:968,72,0
CP000253.1 1787189 . C T 982.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.30;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:72:1011,72,0
CP000253.1 1787196 . G T 969.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.94;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:72:998,72,0
CP000253.1 1787201 . A C 951.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:72:980,72,0
CP000253.1 1787203 . G T 937.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.954;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.05;ReadPosRankSum=0.788;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,35:36:69:966,69,0
CP000253.1 1787204 . T A 952.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:72:981,72,0
CP000253.1 1787250 . T G 2818.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2847,202,0
CP000253.1 1787251 . T C 2763.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2792,199,0
CP000253.1 1787270 . G A 2864.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.03;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2893,205,0
CP000253.1 1787273 . C T 2864.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.223;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.77;ReadPosRankSum=1.749;SOR=0.793 GT:AD:DP:GQ:PL 1/1:1,106:107:99:2893,205,0
CP000253.1 1787279 . T A 2965.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.96;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2994,214,0
CP000253.1 1787285 . T C 2936.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.70;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2965,211,0
CP000253.1 1787300 . C A 3151.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6918;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.49;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3180,226,0
CP000253.1 1787309 . G A 3252.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0826;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.11;SOR=1.217 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3281,232,0
CP000253.1 1787321 . T A 3326.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7374;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.05;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,123:124:99:3355,241,0
CP000253.1 1787327 . G A 3094.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.23;ReadPosRankSum=-1.398;SOR=1.083 GT:AD:DP:GQ:PL 1/1:1,117:118:99:3123,223,0
CP000253.1 1787333 . C T 2909.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=1.386 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2938,211,0
CP000253.1 1787336 . C T 2992.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.386 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3021,214,0
CP000253.1 1787339 . G A 2890.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.365 GT:AD:DP:GQ:PL 1/1:0,109:110:99:2919,208,0
CP000253.1 1787344 . T C 2894.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,110:111:99:2923,208,0
CP000253.1 1787351 . G T 3043.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.42;SOR=1.407 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3072,217,0
CP000253.1 1787352 . T G 3023.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.00;SOR=1.428 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3052,217,0
CP000253.1 1787359 . T A 3462.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.720;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.65;ReadPosRankSum=0.347;SOR=0.527 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3491,250,0
CP000253.1 1787363 . C T 3760.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.06;SOR=1.414 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3789,271,0
CP000253.1 1787405 . T A 4453.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=1.311 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4482,322,0
CP000253.1 1787462 . T C 4233.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5927;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=1.070 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4262,301,0
CP000253.1 1787468 . A G 4451.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2230;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=1.063 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4480,319,0
CP000253.1 1787486 . A T 4495.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,185:188:99:4524,319,0
CP000253.1 1787508 . A G 4209.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.550;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.78;ReadPosRankSum=2.436;SOR=0.851 GT:AD:DP:GQ:PL 1/1:2,175:178:99:4238,301,0
CP000253.1 1787595 . G T 4279.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4308,307,0
CP000253.1 1787626 . T C 3987.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.40;ReadPosRankSum=1.733;SOR=0.694 GT:AD:DP:GQ:PL 1/1:1,156:158:99:4016,286,0
CP000253.1 1787700 . G T 2944.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.607;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.53;ReadPosRankSum=1.364;SOR=1.423 GT:AD:DP:GQ:PL 1/1:2,109:111:99:2973,214,0
CP000253.1 1787702 . T A 2900.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.11;ReadPosRankSum=-1.442;SOR=1.218 GT:AD:DP:GQ:PL 1/1:1,106:110:99:2929,211,0
CP000253.1 1787716 . C T 2802.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.267;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.69;ReadPosRankSum=-1.656;SOR=1.022 GT:AD:DP:GQ:PL 1/1:2,103:106:99:2831,170,0
CP000253.1 1787738 . A C 3616.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.65;ReadPosRankSum=0.873;SOR=0.301 GT:AD:DP:GQ:PL 1/1:1,140:142:99:3645,259,0
CP000253.1 1787850 . A G 4072.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4101,283,0
CP000253.1 1787893 . C A 4086.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.96;ReadPosRankSum=0.613;SOR=0.277 GT:AD:DP:GQ:PL 1/1:1,177:178:99:4115,286,0
CP000253.1 1787900 . G A 4137.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.020;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8961;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.51;ReadPosRankSum=-1.339;SOR=0.289 GT:AD:DP:GQ:PL 1/1:1,175:177:99:4166,286,0
CP000253.1 1787930 . C A 4208.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.876;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3800;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.25;ReadPosRankSum=1.168;SOR=0.282 GT:AD:DP:GQ:PL 1/1:1,180:182:99:4237,292,0
CP000253.1 1787965 . C T 4079.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4108,283,0
CP000253.1 1787967 . T G 4079.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.023;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.31;ReadPosRankSum=0.941;SOR=0.447 GT:AD:DP:GQ:PL 1/1:1,174:175:99:4108,283,0
CP000253.1 1787990 . T G 3786.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,162:162:99:3815,265,0
CP000253.1 1788183 . A T 355.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:384,27,0
CP000253.1 1788209 . C T 189.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:218,15,0
CP000253.1 1788237 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1788677 . T C 689.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:718,51,0
CP000253.1 1788716 . A G 793.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:57:822,57,0
CP000253.1 1788755 . T A 827.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:60:856,60,0
CP000253.1 1788764 . A G 830.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:60:859,60,0
CP000253.1 1788983 . C T 2817.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,125:125:99:2846,193,0
CP000253.1 1789316 . C T 1184.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1213,84,0
CP000253.1 1789436 . C T 2367.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.987;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.68;ReadPosRankSum=1.543;SOR=0.451 GT:AD:DP:GQ:PL 1/1:1,99:100:99:2396,166,0
CP000253.1 1789578 . G C 3920.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4179;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,170:171:99:3949,277,0
CP000253.1 1790304 . G A 2877.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0633;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2906,205,0
CP000253.1 1790324 . T C 2917.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0721;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,113:115:99:2946,211,0
CP000253.1 1790420 . T A 1526.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.76;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:56:99:1555,114,0
CP000253.1 1790483 . T A 3287.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.916 GT:AD:DP:GQ:PL 1/1:0,127:128:99:3316,238,0
CP000253.1 1790486 . A G 3433.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3462,247,0
CP000253.1 1791026 . T A 2722.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.548;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.88;ReadPosRankSum=-0.551;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,112:114:99:2751,193,0
CP000253.1 1791035 . T C 2704.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.974;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1242;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.81;ReadPosRankSum=1.511;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,108:112:99:2733,193,0
CP000253.1 1791918 . T C 2777.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7978;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2806,196,0
CP000253.1 1792018 . A T 800.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:60:829,60,0
CP000253.1 1792045 . T C 746.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:30:54:775,54,0
CP000253.1 1792333 . T C 2422.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6180;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=-0.125;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,96:98:99:2451,172,0
CP000253.1 1792390 . C G 2568.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2597,187,0
CP000253.1 1792996 . A G 1291.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.536;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.92;ReadPosRankSum=-1.605;SOR=1.198 GT:AD:DP:GQ:PL 1/1:1,53:54:99:1320,99,0
CP000253.1 1793050 . A G 2336.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7869;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=1.109 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2365,169,0
CP000253.1 1793125 . G A 4261.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2434;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,175:176:99:4290,301,0
CP000253.1 1793179 . G A 4672.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4877;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,196:196:99:4701,325,0
CP000253.1 1793838 . A G 1973.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.828;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0179;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.22;ReadPosRankSum=-0.816;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,84:87:99:2002,110,0
CP000253.1 1794170 . T C 2592.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.715;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6546;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.94;ReadPosRankSum=0.752;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,112:113:99:2621,146,0
CP000253.1 1794390 . G A 1155.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=49.8558;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:81:1184,81,0
CP000253.1 1794504 . C G 1949.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1978,138,0
CP000253.1 1794816 . T C 1073.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1102,78,0
CP000253.1 1794888 . T C 762.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.821;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.43;ReadPosRankSum=-0.102;SOR=0.507 GT:AD:DP:GQ:PL 1/1:1,33:34:54:791,54,0
CP000253.1 1795361 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1795379 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1795380 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1797039 . G A 1070.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:75:1099,75,0
CP000253.1 1797416 . G T 212.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.28;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:241,18,0
CP000253.1 1797835 . G A 900.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:38:66:929,66,0
CP000253.1 1797992 . G A 2471.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2500,175,0
CP000253.1 1798494 . A T 2473.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2502,178,0
CP000253.1 1798496 . A G 2445.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2474,175,0
CP000253.1 1798607 . T C 2118.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.82;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:81:99:2147,156,0
CP000253.1 1798668 . A G 2269.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.600;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.15;ReadPosRankSum=-0.848;SOR=0.325 GT:AD:DP:GQ:PL 1/1:1,93:94:99:2298,166,0
CP000253.1 1798680 . G A 2486.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.843;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5814;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.64;ReadPosRankSum=1.411;SOR=0.356 GT:AD:DP:GQ:PL 1/1:1,96:97:99:2515,178,0
CP000253.1 1798770 . C T 3340.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.974;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.69;ReadPosRankSum=1.242;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,140:142:99:3369,235,0
CP000253.1 1798856 . C T 3325.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,141:143:99:3354,235,0
CP000253.1 1798917 . T A 3056.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2293;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3085,214,0
CP000253.1 1798920 . C A 3115.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3144,217,0
CP000253.1 1799082 . A G 1236.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=1.414 GT:AD:DP:GQ:PL 1/1:0,45:45:90:1265,90,0
CP000253.1 1799122 . T A 527.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.78;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:42:556,42,0
CP000253.1 1799292 . C T 1272.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1301,90,0
CP000253.1 1799733 . C A 1598.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9744;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1627,117,0
CP000253.1 1800218 . G T 2533.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.114;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.60;ReadPosRankSum=1.431;SOR=0.358 GT:AD:DP:GQ:PL 1/1:1,102:103:99:2562,178,0
CP000253.1 1800233 . A C 2416.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4252;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2445,172,0
CP000253.1 1800484 . A T 1800.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1829,129,0
CP000253.1 1800562 . T G 3006.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.487;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8224;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.78;ReadPosRankSum=-0.243;SOR=0.822 GT:AD:DP:GQ:PL 1/1:2,130:132:99:3035,214,0
CP000253.1 1800720 . C T 3133.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3162,220,0
CP000253.1 1800753 . T C 3320.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5171;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3349,238,0
CP000253.1 1800835 . A G 2417.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.005;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.03;ReadPosRankSum=-1.486;SOR=0.273 GT:AD:DP:GQ:PL 1/1:1,104:107:99:2446,169,0
CP000253.1 1801189 . G A 361.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:390,27,0
CP000253.1 1801229 . G C 362.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:391,27,0
CP000253.1 1801705 . T A 3138.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.587;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1008;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.14;ReadPosRankSum=0.710;SOR=1.051 GT:AD:DP:GQ:PL 1/1:2,128:130:99:3167,194,0
CP000253.1 1801870 . T A 2519.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4981;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.20;ReadPosRankSum=-0.572;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,99:101:99:2548,181,0
CP000253.1 1802454 . C A 1484.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1513,105,0
CP000253.1 1802527 . A T 2031.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2060,141,0
CP000253.1 1802542 . G A 2138.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2167,147,0
CP000253.1 1802638 . A T 2158.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2187,150,0
CP000253.1 1802662 . G A 1677.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4419;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,72:74:99:1706,120,0
CP000253.1 1802696 . C T 1130.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1159,81,0
CP000253.1 1802770 . T C 950.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.555;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.19;ReadPosRankSum=-1.156;SOR=0.312 GT:AD:DP:GQ:PL 1/1:1,40:41:69:979,69,0
CP000253.1 1802962 . G A 301.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:330,24,0
CP000253.1 1803159 . A T 608.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8664;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:637,45,0
CP000253.1 1803304 . T C 1467.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1496,102,0
CP000253.1 1803518 . C T 486.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:515,36,0
CP000253.1 1804302 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1804376 . T C 45.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:73,6,0
CP000253.1 1804599 . T C 1430.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1459,99,0
CP000253.1 1804615 . A T 1425.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1454,99,0
CP000253.1 1804683 . C T 1142.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1171,81,0
CP000253.1 1804750 . A T 1400.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.823;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1083;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.96;ReadPosRankSum=0.171;SOR=0.435 GT:AD:DP:GQ:PL 1/1:1,60:62:99:1429,99,0
CP000253.1 1804872 . C T 1306.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9042;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1335,93,0
CP000253.1 1805054 . C A 1144.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.20;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:81:1173,81,0
CP000253.1 1805249 . A G 875.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:63:904,63,0
CP000253.1 1805387 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1805511 . A G 700.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:51:729,51,0
CP000253.1 1805747 . T C 1222.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:53:90:1251,90,0
CP000253.1 1806851 . G A 589.10 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.818;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7145;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.61;ReadPosRankSum=-1.611;SOR=0.527 GT:AD:DP:GQ:PL 1/1:1,22:23:11:617,11,0
CP000253.1 1806905 . T A 1456.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.49;SOR=1.287 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1485,105,0
CP000253.1 1807118 . C T 2727.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2756,190,0
CP000253.1 1808367 . G C 51.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:79,6,0
CP000253.1 1808522 . T A 324.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:353,24,0
CP000253.1 1808667 . A T 903.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:63:932,63,0
CP000253.1 1808835 . A G 329.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:358,24,0
CP000253.1 1808901 . A T 185.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.66;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:214,15,0
CP000253.1 1809424 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1809428 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1809474 . A T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1809546 . A G 284.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:21:313,21,0
CP000253.1 1809705 . C T 141.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:169,12,0
CP000253.1 1810397 . A T 364.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.46;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:393,27,0
CP000253.1 1810412 . C A 374.78 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.73;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:27:403,27,0
CP000253.1 1810512 . C A 598.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:42:627,42,0
CP000253.1 1810527 . G A 594.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:623,42,0
CP000253.1 1810540 . A C 594.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:623,42,0
CP000253.1 1810629 . C T 224.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:253,18,0
CP000253.1 1810662 . T G 142.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:170,12,0
CP000253.1 1810717 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1810862 . A G 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1810931 . G A 277.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:306,21,0
CP000253.1 1810977 . C T 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1811005 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:10:15:220,15,0
CP000253.1 1811061 . A G 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 1811153 . A G 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1811160 . T A 180.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:209,15,0
CP000253.1 1811279 . T A 2042.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5193;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2071,141,0
CP000253.1 1811762 . A C 1928.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1957,138,0
CP000253.1 1812225 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1812443 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1812447 . T A 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 1812454 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1812461 . C G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1812514 . A G 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1812639 . C T 927.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:66:956,66,0
CP000253.1 1813214 . T C 935.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:66:964,66,0
CP000253.1 1813252 . T C 919.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:66:948,66,0
CP000253.1 1813297 . A G 747.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:54:776,54,0
CP000253.1 1813307 . C T 707.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:51:736,51,0
CP000253.1 1813318 . G A 711.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:51:740,51,0
CP000253.1 1813328 . A G 660.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:48:689,48,0
CP000253.1 1813491 . A T 484.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:513,36,0
CP000253.1 1813493 . G A 499.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.73;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:24:36:528,36,0
CP000253.1 1813510 . C T 439.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:468,33,0
CP000253.1 1813515 . T A 510.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:39:539,39,0
CP000253.1 1813517 . T A 513.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:39:542,39,0
CP000253.1 1813518 . C A 518.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:39:547,39,0
CP000253.1 1813521 . T C 519.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:39:548,39,0
CP000253.1 1813589 . G C 461.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:36:490,36,0
CP000253.1 1813843 . C T 832.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=54.97;MQ0=0;QD=23.79;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:861,60,0
CP000253.1 1813859 . C T 800.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.38;MQ0=0;QD=24.27;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:57:829,57,0
CP000253.1 1813882 . T A 782.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7502;MLEAC=2;MLEAF=1.00;MQ=56.64;MQ0=0;QD=24.46;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:57:811,57,0
CP000253.1 1814017 . A T 140.03 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.48;MQ0=3;QD=15.56;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,9:9:12:168,12,0
CP000253.1 1814069 . A G 98.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=35.33;MQ0=1;QD=19.66;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,5:5:9:126,9,0
CP000253.1 1814216 . A T 11.83 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=19.53;MQ0=2;QD=2.96;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,4:4:3:38,3,0
CP000253.1 1814441 . G T 87.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=32.46;MQ0=0;QD=14.55;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:9:115,9,0
CP000253.1 1814584 . T C 87.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=35.54;MQ0=0;QD=17.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:115,9,0
CP000253.1 1814721 . A C 61.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.33;MQ0=0;QD=15.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:89,6,0
CP000253.1 1814725 . G A 61.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.33;MQ0=0;QD=15.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:89,6,0
CP000253.1 1814782 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1814804 . G A 89.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.13;MQ0=0;QD=22.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:117,9,0
CP000253.1 1814826 . C T 89.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.13;MQ0=0;QD=22.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:117,9,0
CP000253.1 1814913 . C T 138.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.18;MQ0=0;QD=19.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:166,12,0
CP000253.1 1814914 . G A 138.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.18;MQ0=0;QD=19.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:166,12,0
CP000253.1 1815027 . A T 1389.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7873;MLEAC=2;MLEAF=1.00;MQ=50.72;MQ0=0;QD=22.06;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1418,99,0
CP000253.1 1815036 . A G 1539.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.970;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4453;MLEAC=2;MLEAF=1.00;MQ=50.52;MQ0=0;MQRankSum=1.609;QD=22.32;ReadPosRankSum=0.981;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,68:69:99:1568,111,0
CP000253.1 1815099 . A G 1672.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=47.35;MQ0=1;QD=21.17;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,79:80:99:1701,117,0
CP000253.1 1815149 . T C 1571.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=46.16;MQ0=1;QD=20.68;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1600,111,0
CP000253.1 1815221 . C T 1206.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=41.37;MQ0=1;QD=20.45;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,59:59:87:1235,87,0
CP000253.1 1815255 . A C 1148.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.56;MQ0=1;QD=20.15;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,57:57:84:1177,84,0
CP000253.1 1815263 . C T 1169.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.56;MQ0=1;QD=20.52;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,57:57:84:1198,84,0
CP000253.1 1815285 . A T 1100.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6132;MLEAC=2;MLEAF=1.00;MQ=40.62;MQ0=3;QD=19.66;SOR=0.730 GT:AD:DP:GQ:PL 1/1:2,54:56:81:1129,81,0
CP000253.1 1815411 . G A 421.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=58.30;MQ0=0;QD=28.12;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:33:450,33,0
CP000253.1 1815482 . C T 2172.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2201,154,0
CP000253.1 1815495 . G T 2435.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2464,175,0
CP000253.1 1815504 . T A 2378.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2407,172,0
CP000253.1 1815505 . T G 2507.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2536,178,0
CP000253.1 1815597 . A G 3143.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3172,217,0
CP000253.1 1815621 . C T 3093.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3122,214,0
CP000253.1 1815637 . G A 3076.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5580;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3105,211,0
CP000253.1 1815646 . G C 3244.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8216;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3273,223,0
CP000253.1 1815775 . C T 2051.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2197;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2080,147,0
CP000253.1 1815810 . G C 1480.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1509,105,0
CP000253.1 1815919 . A G 578.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.26;ReadPosRankSum=-1.603;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,25:26:45:607,45,0
CP000253.1 1815921 . A T 580.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:609,42,0
CP000253.1 1815984 . A G 688.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:31:51:717,51,0
CP000253.1 1816445 . T C 274.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:303,21,0
CP000253.1 1816465 . T C 264.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:293,21,0
CP000253.1 1816470 . C A 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 1816505 . A C 420.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:449,33,0
CP000253.1 1816712 . A G 1565.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.835;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.05;ReadPosRankSum=1.440;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1594,108,0
CP000253.1 1816738 . T C 1627.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.835;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.70;ReadPosRankSum=1.132;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,74:75:99:1656,114,0
CP000253.1 1816819 . T A 1553.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1582,108,0
CP000253.1 1816864 . C T 1318.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,53:53:93:1347,93,0
CP000253.1 1817371 . A G 1495.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9183;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:61:99:1524,108,0
CP000253.1 1817427 . T C 917.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:66:946,66,0
CP000253.1 1817558 . C A 431.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:33:460,33,0
CP000253.1 1817570 . T A 718.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:54:747,54,0
CP000253.1 1817627 . G T 2069.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2098,147,0
CP000253.1 1817705 . A G 2942.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2971,211,0
CP000253.1 1817753 . C T 3308.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3337,235,0
CP000253.1 1817894 . G A 3418.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4447;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.50;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3447,247,0
CP000253.1 1817906 . A G 3242.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,123:125:99:3271,235,0
CP000253.1 1817969 . G A 3321.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,126:128:99:3350,241,0
CP000253.1 1818110 . T C 3838.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3867,283,0
CP000253.1 1818116 . A G 3901.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3165;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,149:151:99:3930,283,0
CP000253.1 1818149 . C A 4363.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4392,313,0
CP000253.1 1818278 . T A 5102.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.4008;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,208:208:99:5131,361,0
CP000253.1 1818326 . A G 4996.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5025,352,0
CP000253.1 1818332 . C T 5006.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9522;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,205:205:99:5035,355,0
CP000253.1 1818653 . A G 2143.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3901;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2172,154,0
CP000253.1 1819913 . C A 4118.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.842;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.9861;MLEAC=2;MLEAF=1.00;MQ=59.84;MQ0=0;MQRankSum=0.000;QD=25.11;ReadPosRankSum=1.711;SOR=0.283 GT:AD:DP:GQ:PL 1/1:1,163:167:99:4147,304,0
CP000253.1 1820141 . T A 3864.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6912;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,151:152:99:3893,277,0
CP000253.1 1820364 . C T 4031.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:157:99:4060,289,0
CP000253.1 1820740 . A T 55.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.674;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=9.29;ReadPosRankSum=0.431;SOR=0.941 GT:AD:DP:GQ:PL 1/1:1,5:6:6:83,6,0
CP000253.1 1821574 . T C 2294.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7406;MLEAC=2;MLEAF=1.00;MQ=59.67;MQ0=0;QD=29.42;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:80:99:2323,172,0
CP000253.1 1821601 . A C 2488.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8255;MLEAC=2;MLEAF=1.00;MQ=59.71;MQ0=0;QD=27.96;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2517,187,0
CP000253.1 1821638 . T C 2531.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6908;MLEAC=2;MLEAF=1.00;MQ=59.70;MQ0=0;QD=28.77;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:89:99:2560,187,0
CP000253.1 1821732 . G A 3312.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5961;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.169 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3341,241,0
CP000253.1 1821743 . G T 3460.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3563;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=1.092 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3489,253,0
CP000253.1 1822235 . G A 4238.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:156:99:4267,310,0
CP000253.1 1822455 . T G 4542.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1892;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4571,325,0
CP000253.1 1822488 . C T 4319.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1658;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,172:173:99:4348,307,0
CP000253.1 1822709 . A G 2045.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.690;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=1.635;SOR=0.233 GT:AD:DP:GQ:PL 1/1:1,85:88:99:2074,147,0
CP000253.1 1822752 . T G 2204.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.50;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2233,157,0
CP000253.1 1823161 . T C 2671.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2700,187,0
CP000253.1 1823200 . C T 2585.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2614,181,0
CP000253.1 1823341 . A T 3171.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.97;ReadPosRankSum=0.150;SOR=0.273 GT:AD:DP:GQ:PL 1/1:1,126:128:99:3200,226,0
CP000253.1 1823343 . G T 3245.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3274,229,0
CP000253.1 1823344 . C A 3249.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3278,229,0
CP000253.1 1823346 . C T 3244.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3273,229,0
CP000253.1 1823347 . C A 3249.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3278,229,0
CP000253.1 1823359 . T A 3617.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3646,256,0
CP000253.1 1823431 . G A 3470.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7664;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=24.97;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,139:141:99:3499,247,0
CP000253.1 1823474 . G A 3544.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4616;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=24.79;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3573,250,0
CP000253.1 1823642 . G A 2928.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6302;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:117:99:2957,211,0
CP000253.1 1823712 . A G 3553.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.863;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.75;ReadPosRankSum=-1.356;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,137:138:99:3582,253,0
CP000253.1 1823743 . G T 3682.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3711,262,0
CP000253.1 1823860 . T C 3645.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3674,259,0
CP000253.1 1824082 . G A 3799.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.908;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.84;ReadPosRankSum=0.929;SOR=0.234 GT:AD:DP:GQ:PL 1/1:1,152:153:99:3828,274,0
CP000253.1 1824296 . T C 3675.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,145:148:99:3704,262,0
CP000253.1 1824308 . T C 3467.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.821;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9361;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=-0.698;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,138:141:99:3496,247,0
CP000253.1 1824376 . G T 3720.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3749,265,0
CP000253.1 1824584 . G A 3548.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0509;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3577,253,0
CP000253.1 1824620 . C T 3572.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6182;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3601,253,0
CP000253.1 1824675 . A C 3292.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2086;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3321,235,0
CP000253.1 1824692 . G A 3056.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3085,223,0
CP000253.1 1824743 . T A 2603.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2632,187,0
CP000253.1 1825256 . C T 2000.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5670;MLEAC=2;MLEAF=1.00;MQ=59.62;MQ0=0;QD=26.68;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,75:76:99:2029,147,0
CP000253.1 1825337 . T A 2613.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1237;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2642,190,0
CP000253.1 1825372 . T C 2787.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2816,199,0
CP000253.1 1825436 . T C 3279.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.800;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.77;ReadPosRankSum=-0.930;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,137:138:99:3308,232,0
CP000253.1 1825482 . T C 3580.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3609,253,0
CP000253.1 1825604 . A G 3061.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.642;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6344;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.37;ReadPosRankSum=-1.124;SOR=0.292 GT:AD:DP:GQ:PL 1/1:1,130:132:99:3090,220,0
CP000253.1 1825850 . G T 360.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:389,27,0
CP000253.1 1826005 . G A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1826316 . T C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1826863 . A G 919.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,37:38:66:948,66,0
CP000253.1 1826945 . A T 1508.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.719;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1249;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=-1.058;SOR=1.043 GT:AD:DP:GQ:PL 1/1:1,58:60:99:1537,111,0
CP000253.1 1826981 . T C 1562.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1591,114,0
CP000253.1 1827047 . C T 2039.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1803;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=1.080 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2068,144,0
CP000253.1 1827053 . T A 2284.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.776;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.31;ReadPosRankSum=-1.198;SOR=0.387 GT:AD:DP:GQ:PL 1/1:1,93:95:99:2313,163,0
CP000253.1 1827184 . C G 2631.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:113:99:2660,187,0
CP000253.1 1827224 . A T 2348.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.832;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.97;ReadPosRankSum=1.557;SOR=0.388 GT:AD:DP:GQ:PL 1/1:1,97:98:99:2377,172,0
CP000253.1 1827263 . A T 2120.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2149,156,0
CP000253.1 1827290 . A T 2097.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.767;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6885;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.11;ReadPosRankSum=1.694;SOR=0.684 GT:AD:DP:GQ:PL 1/1:1,86:88:99:2126,150,0
CP000253.1 1827312 . T A 1999.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2028,141,0
CP000253.1 1827418 . C T 1623.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:66:99:1652,117,0
CP000253.1 1827427 . G A 1622.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1651,117,0
CP000253.1 1827479 . A C 1679.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.833;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.07;ReadPosRankSum=1.372;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,66:67:99:1708,120,0
CP000253.1 1827526 . C T 1571.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.809;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=-0.358;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,62:63:99:1600,114,0
CP000253.1 1827590 . A G 1664.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.853;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9250;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.85;ReadPosRankSum=1.423;SOR=0.722 GT:AD:DP:GQ:PL 1/1:1,66:68:99:1693,120,0
CP000253.1 1827592 . T C 1648.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,65:68:99:1677,117,0
CP000253.1 1827595 . A T 1751.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=1.011 GT:AD:DP:GQ:PL 1/1:0,70:71:99:1780,126,0
CP000253.1 1827607 . C T 1838.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1867,129,0
CP000253.1 1827626 . A G 2064.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5953;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2093,144,0
CP000253.1 1827718 . A G 2727.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.863;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.93;ReadPosRankSum=1.581;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,113:114:99:2756,193,0
CP000253.1 1827821 . C T 2778.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.859;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.16;ReadPosRankSum=1.537;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,114:116:99:2807,196,0
CP000253.1 1827931 . A T 2065.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2094,147,0
CP000253.1 1827943 . T A 2213.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2242,160,0
CP000253.1 1828137 . G A 2898.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.723;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.01;ReadPosRankSum=-0.138;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,125:127:99:2927,182,0
CP000253.1 1828228 . G A 2445.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2474,172,0
CP000253.1 1828292 . C A 1884.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1913,132,0
CP000253.1 1828312 . T G 1467.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1496,105,0
CP000253.1 1828345 . C T 1200.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.042;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.09;ReadPosRankSum=-1.904;SOR=0.537 GT:AD:DP:GQ:PL 1/1:3,49:53:49:1229,49,0
CP000253.1 1828353 . T A 1294.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.000;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2065;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.39;ReadPosRankSum=0.952;SOR=0.477 GT:AD:DP:GQ:PL 1/1:1,50:51:93:1323,93,0
CP000253.1 1828360 . T C 1294.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.97;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:93:1323,93,0
CP000253.1 1828364 . G A 1276.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:93:1305,93,0
CP000253.1 1828368 . G A 1201.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:87:1230,87,0
CP000253.1 1828375 . C T 1105.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1134,81,0
CP000253.1 1828378 . C T 1056.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7581;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1085,78,0
CP000253.1 1828395 . A T 1038.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1067,75,0
CP000253.1 1828410 . G A 970.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.74;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:72:999,72,0
CP000253.1 1828425 . A T 773.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:60:802,60,0
CP000253.1 1828429 . A T 770.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:57:799,57,0
CP000253.1 1828434 . T A 801.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.65;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:60:830,60,0
CP000253.1 1828438 . T A 808.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.88;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:60:837,60,0
CP000253.1 1828448 . T G 325.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.15;ReadPosRankSum=-1.593;SOR=0.293 GT:AD:DP:GQ:PL 1/1:1,11:12:27:354,27,0
CP000253.1 1828452 . A T 317.31 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.728;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.44;ReadPosRankSum=-1.593;SOR=0.293 GT:AD:DP:GQ:PL 0/1:1,11:12:1:343,0,1
CP000253.1 1828453 . T A 335.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.955;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.98;ReadPosRankSum=-1.593;SOR=0.293 GT:AD:DP:GQ:PL 1/1:1,11:12:27:364,27,0
CP000253.1 1828463 . A T 531.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.885;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=59.35;MQ0=0;MQRankSum=4.478;QD=27.99;ReadPosRankSum=1.217;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,18:19:42:560,42,0
CP000253.1 1828507 . G T 672.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8368;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:51:701,51,0
CP000253.1 1828525 . T C 772.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2049;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:60:801,60,0
CP000253.1 1828551 . G A 788.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3439;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:57:817,57,0
CP000253.1 1828572 . A C 1087.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:42:81:1116,81,0
CP000253.1 1828586 . C G 1079.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:43:81:1108,81,0
CP000253.1 1828651 . A C 1285.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:53:93:1314,93,0
CP000253.1 1828678 . C T 1272.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1301,90,0
CP000253.1 1828680 . T C 1303.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:93:1332,93,0
CP000253.1 1828684 . T C 1306.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1775;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:53:93:1335,93,0
CP000253.1 1828688 . T A 1305.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2322;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:93:1334,93,0
CP000253.1 1828696 . A T 1339.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1368,96,0
CP000253.1 1828723 . A G 1219.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1248,87,0
CP000253.1 1828726 . C T 1301.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:93:1330,93,0
CP000253.1 1828780 . A T 1224.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:52:87:1253,87,0
CP000253.1 1828792 . T C 1105.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:47:81:1134,81,0
CP000253.1 1828816 . C T 844.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:63:873,63,0
CP000253.1 1828819 . A G 911.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.99;ReadPosRankSum=-0.548;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,37:38:66:940,66,0
CP000253.1 1828855 . C T 939.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2585;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:41:69:968,69,0
CP000253.1 1828900 . T C 988.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1017,72,0
CP000253.1 1828911 . A G 834.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:63:863,63,0
CP000253.1 1828912 . C T 812.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:60:841,60,0
CP000253.1 1828913 . A G 811.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:60:840,60,0
CP000253.1 1828922 . G A 941.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:69:970,69,0
CP000253.1 1828962 . T A 739.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.744;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.66;ReadPosRankSum=0.695;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,29:30:54:768,54,0
CP000253.1 1828978 . A C 811.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:60:840,60,0
CP000253.1 1828990 . C T 821.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:60:850,60,0
CP000253.1 1828992 . T C 815.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:60:844,60,0
CP000253.1 1829007 . T C 727.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:33:54:756,54,0
CP000253.1 1829010 . A T 722.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.791;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.90;ReadPosRankSum=0.526;SOR=0.618 GT:AD:DP:GQ:PL 1/1:1,32:33:54:751,54,0
CP000253.1 1829011 . C T 730.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:33:54:759,54,0
CP000253.1 1829020 . T C 743.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:32:54:772,54,0
CP000253.1 1829059 . T C 489.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.836;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.32;ReadPosRankSum=-0.827;SOR=1.198 GT:AD:DP:GQ:PL 1/1:1,20:21:39:518,39,0
CP000253.1 1829060 . G C 403.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:432,30,0
CP000253.1 1829061 . G A 397.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:18:30:426,30,0
CP000253.1 1829062 . G T 407.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:436,30,0
CP000253.1 1829068 . T A 395.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:424,30,0
CP000253.1 1829074 . T A 400.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:429,30,0
CP000253.1 1829076 . A C 398.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.15;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:427,30,0
CP000253.1 1829096 . T G 337.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:366,27,0
CP000253.1 1829099 . C T 354.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:383,27,0
CP000253.1 1829114 . C T 307.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:336,24,0
CP000253.1 1829132 . C A 306.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:335,24,0
CP000253.1 1829133 . G A 309.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:338,24,0
CP000253.1 1829168 . G A 582.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:611,42,0
CP000253.1 1829219 . C T 1235.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1264,87,0
CP000253.1 1829234 . A C 1208.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1237,87,0
CP000253.1 1829237 . C T 1196.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1225,84,0
CP000253.1 1829249 . G C 1182.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1211,84,0
CP000253.1 1829252 . T C 1354.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1383,96,0
CP000253.1 1829268 . T A 1317.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:93:1346,93,0
CP000253.1 1829274 . A T 1377.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:96:1406,96,0
CP000253.1 1829276 . G A 1378.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:96:1407,96,0
CP000253.1 1829291 . C T 1293.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1322,90,0
CP000253.1 1829299 . A C 1203.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1232,84,0
CP000253.1 1829307 . G A 1203.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1232,84,0
CP000253.1 1829321 . T C 1288.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.094;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.01;ReadPosRankSum=-1.457;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,55:56:90:1317,90,0
CP000253.1 1829330 . T A 1288.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:90:1317,90,0
CP000253.1 1829333 . A G 1335.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1364,93,0
CP000253.1 1829348 . G A 1257.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,56:56:87:1286,87,0
CP000253.1 1829372 . C T 1208.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:84:1237,84,0
CP000253.1 1829414 . A T 585.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:28:42:614,42,0
CP000253.1 1829475 . A T 359.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:388,27,0
CP000253.1 1829513 . T C 353.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:382,27,0
CP000253.1 1829550 . T C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1829578 . A G 178.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:207,15,0
CP000253.1 1829589 . T C 218.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:247,18,0
CP000253.1 1829597 . T C 218.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:8:18:247,18,0
CP000253.1 1829637 . A T 863.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.771;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.35;ReadPosRankSum=-0.849;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,36:37:63:892,63,0
CP000253.1 1829666 . G A 1270.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:90:1299,90,0
CP000253.1 1829700 . A G 1537.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1566,108,0
CP000253.1 1829787 . C T 2698.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2727,187,0
CP000253.1 1829793 . T C 2797.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2826,193,0
CP000253.1 1829802 . G A 2742.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.062;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.05;ReadPosRankSum=0.947;SOR=0.386 GT:AD:DP:GQ:PL 1/1:1,118:119:99:2771,190,0
CP000253.1 1829817 . T C 2700.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1666;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2729,187,0
CP000253.1 1829818 . C T 2660.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1666;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,116:117:99:2689,184,0
CP000253.1 1829826 . T C 2756.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.05;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,125:125:99:2785,193,0
CP000253.1 1829842 . A G 2808.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.971;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4049;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.29;ReadPosRankSum=-1.486;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,125:126:99:2837,193,0
CP000253.1 1829860 . G A 3050.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3079,208,0
CP000253.1 1829941 . C A 2134.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2163,147,0
CP000253.1 1829958 . A G 2067.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2096,144,0
CP000253.1 1830007 . G A 1753.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9405;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,71:73:99:1782,123,0
CP000253.1 1830017 . A C 1546.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0619;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1575,108,0
CP000253.1 1830067 . G A 951.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,39:39:69:980,69,0
CP000253.1 1830085 . T C 690.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:51:719,51,0
CP000253.1 1830112 . A G 609.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:45:638,45,0
CP000253.1 1830129 . A T 262.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:291,21,0
CP000253.1 1830161 . T G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1832001 . T A 361.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:390,27,0
CP000253.1 1832004 . A T 294.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:323,24,0
CP000253.1 1832023 . A C 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 1832028 . G A 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 1832055 . G A 223.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:252,18,0
CP000253.1 1832125 . C T 171.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:200,15,0
CP000253.1 1832160 . A G 172.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.29;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:15:201,15,0
CP000253.1 1832166 . T C 191.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.19;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:15:220,15,0
CP000253.1 1832173 . T C 215.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:244,18,0
CP000253.1 1832238 . A G 612.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:45:641,45,0
CP000253.1 1832244 . A T 629.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:45:658,45,0
CP000253.1 1832246 . C T 628.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:45:657,45,0
CP000253.1 1832266 . A G 807.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:57:836,57,0
CP000253.1 1832381 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1832404 . C T 1030.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=59.32;MQ0=0;QD=22.91;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1059,72,0
CP000253.1 1832406 . A T 1019.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=59.32;MQ0=0;QD=22.66;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1048,72,0
CP000253.1 1832435 . G T 1256.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.39;MQ0=0;QD=22.85;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1285,87,0
CP000253.1 1832448 . G A 1233.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=58.39;MQ0=0;QD=22.43;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1262,87,0
CP000253.1 1832494 . G A 1149.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=58.27;MQ0=0;QD=22.54;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1178,81,0
CP000253.1 1832502 . G T 1211.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.35;MQ0=0;QD=22.86;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:84:1240,84,0
CP000253.1 1832529 . C T 1164.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.24;MQ0=0;QD=22.84;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1193,81,0
CP000253.1 1832532 . A T 1114.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.17;MQ0=0;QD=22.75;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:78:1143,78,0
CP000253.1 1832546 . T C 1062.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.04;MQ0=0;QD=22.61;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:75:1091,75,0
CP000253.1 1832564 . G A 404.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.41;MQ0=0;QD=23.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:433,30,0
CP000253.1 1832588 . A T 360.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=50.15;MQ0=0;QD=24.05;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:389,27,0
CP000253.1 1832990 . G A 494.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:523,36,0
CP000253.1 1832994 . T C 612.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:45:641,45,0
CP000253.1 1833010 . T C 758.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:54:787,54,0
CP000253.1 1833016 . T C 750.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:33:54:779,54,0
CP000253.1 1833073 . G A 429.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.513;DP=62;Dels=0.00;ExcessHet=3.0103;FS=1.013;HaplotypeScore=7.1822;MLEAC=1;MLEAF=0.500;MQ=59.28;MQ0=0;MQRankSum=0.196;QD=6.93;ReadPosRankSum=-5.636;SOR=0.927 GT:AD:DP:GQ:PL 0/1:39,23:62:99:458,0,887
CP000253.1 1833074 . T C 843.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.037;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.961;HaplotypeScore=8.8102;MLEAC=1;MLEAF=0.500;MQ=59.31;MQ0=0;MQRankSum=2.173;QD=12.98;ReadPosRankSum=5.881;SOR=0.617 GT:AD:DP:GQ:PL 0/1:26,39:65:99:872,0,541
CP000253.1 1833083 . A C 836.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.440;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.961;HaplotypeScore=9.9797;MLEAC=1;MLEAF=0.500;MQ=59.32;MQ0=0;MQRankSum=2.200;QD=12.68;ReadPosRankSum=5.239;SOR=0.674 GT:AD:DP:GQ:PL 0/1:26,40:66:99:865,0,517
CP000253.1 1833090 . C A 910.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.836;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.978;HaplotypeScore=8.2006;MLEAC=1;MLEAF=0.500;MQ=59.57;MQ0=0;MQRankSum=0.386;QD=14.01;ReadPosRankSum=3.231;SOR=0.606 GT:AD:DP:GQ:PL 0/1:24,41:65:99:939,0,478
CP000253.1 1833091 . G A 433.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.642;DP=65;Dels=0.00;ExcessHet=3.0103;FS=2.130;HaplotypeScore=8.2006;MLEAC=1;MLEAF=0.500;MQ=59.57;MQ0=0;MQRankSum=-1.780;QD=6.67;ReadPosRankSum=-3.479;SOR=0.871 GT:AD:DP:GQ:PL 0/1:40,25:65:99:462,0,900
CP000253.1 1833101 . C G 1607.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7203;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=24.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1636,117,0
CP000253.1 1833109 . A G 1541.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7329;MLEAC=2;MLEAF=1.00;MQ=59.56;MQ0=0;QD=24.47;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1570,111,0
CP000253.1 1833128 . A G 782.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.453;DP=66;Dels=0.00;ExcessHet=3.0103;FS=1.998;HaplotypeScore=12.4661;MLEAC=1;MLEAF=0.500;MQ=59.58;MQ0=0;MQRankSum=1.536;QD=11.86;ReadPosRankSum=2.678;SOR=0.593 GT:AD:DP:GQ:PL 0/1:31,35:66:99:811,0,689
CP000253.1 1833140 . C T 476.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.182;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4477;MLEAC=1;MLEAF=0.500;MQ=59.55;MQ0=0;MQRankSum=-1.114;QD=8.22;ReadPosRankSum=1.003;SOR=0.719 GT:AD:DP:GQ:PL 0/1:33,25:62:99:505,0,792
CP000253.1 1833181 . G T 753.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.401;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.33;ReadPosRankSum=0.379;SOR=0.594 GT:AD:DP:GQ:PL 0/1:5,34:39:56:782,0,56
CP000253.1 1833193 . G A 792.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.883;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.88;ReadPosRankSum=-1.011;SOR=0.654 GT:AD:DP:GQ:PL 0/1:5,37:42:54:821,0,54
CP000253.1 1833202 . A T 632.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.772;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.08;ReadPosRankSum=-0.661;SOR=0.614 GT:AD:DP:GQ:PL 0/1:5,30:35:66:661,0,66
CP000253.1 1833206 . C T 70.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.429;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=1.91;ReadPosRankSum=1.179;SOR=0.943 GT:AD:DP:GQ:PL 0/1:32,5:37:99:99,0,699
CP000253.1 1833211 . A T 75.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.091;DP=35;Dels=0.00;ExcessHet=3.0103;FS=1.817;HaplotypeScore=1.7262;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=2.16;ReadPosRankSum=1.109;SOR=0.939 GT:AD:DP:GQ:PL 0/1:30,5:35:99:104,0,667
CP000253.1 1833236 . T A 74.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.661;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=2.41;ReadPosRankSum=1.424;SOR=0.928 GT:AD:DP:GQ:PL 0/1:26,5:31:99:103,0,591
CP000253.1 1833241 . A G 512.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.647;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.68;ReadPosRankSum=-1.531;SOR=0.885 GT:AD:DP:GQ:PL 0/1:5,24:31:75:541,0,75
CP000253.1 1833242 . T G 73.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.679;DP=29;Dels=0.00;ExcessHet=3.0103;FS=1.862;HaplotypeScore=3.5764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=2.54;ReadPosRankSum=1.358;SOR=0.921 GT:AD:DP:GQ:PL 0/1:24,5:29:99:102,0,551
CP000253.1 1833247 . A C 504.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.41;ReadPosRankSum=-1.589;SOR=0.654 GT:AD:DP:GQ:PL 0/1:5,24:29:75:533,0,75
CP000253.1 1833249 . C A 43.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.939;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=1;MLEAF=0.500;MQ=59.20;MQ0=0;MQRankSum=0.623;QD=1.41;ReadPosRankSum=1.711;SOR=0.627 GT:AD:DP:GQ:PL 0/1:27,4:31:72:72,0,588
CP000253.1 1838981 . A C 176.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:205,15,0
CP000253.1 1839023 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:220,15,0
CP000253.1 1839036 . A G 210.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:239,18,0
CP000253.1 1839054 . C T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1839080 . A G 125.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:153,12,0
CP000253.1 1839152 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 1839167 . C A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1839185 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1839193 . T C 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 1839214 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1839237 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1839249 . C T 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 1839266 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 1839312 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1839323 . T C 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 1839331 . A T 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 1839334 . G A 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 1839340 . T C 322.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:351,24,0
CP000253.1 1839360 . C T 324.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:353,24,0
CP000253.1 1839372 . T A 324.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:353,24,0
CP000253.1 1839887 . C T 136.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.52;MQ0=0;QD=22.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:164,12,0
CP000253.1 1839898 . T A 141.03 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.02;MQ0=0;QD=15.67;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:12:169,12,0
CP000253.1 1839911 . C T 403.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.51;MQ0=0;QD=22.43;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:432,30,0
CP000253.1 1839919 . C A 410.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.54;MQ0=0;QD=21.62;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:439,30,0
CP000253.1 1839938 . C T 414.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.54;MQ0=0;QD=21.83;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:443,30,0
CP000253.1 1839972 . C T 496.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.62;MQ0=0;QD=21.60;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:525,36,0
CP000253.1 1839977 . G A 461.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.790;DP=23;Dels=0.00;ExcessHet=3.0103;FS=3.203;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.62;MQ0=0;MQRankSum=2.054;QD=20.08;ReadPosRankSum=0.686;SOR=0.499 GT:AD:DP:GQ:PL 1/1:1,22:23:35:490,35,0
CP000253.1 1839992 . C T 452.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;QD=21.56;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:481,33,0
CP000253.1 1839994 . T G 456.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;QD=21.75;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:485,33,0
CP000253.1 1839995 . G T 456.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;QD=21.75;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:485,33,0
CP000253.1 1840007 . C T 453.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.61;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:482,33,0
CP000253.1 1840009 . G A 414.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:21:30:443,30,0
CP000253.1 1840067 . A T 600.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:45:629,45,0
CP000253.1 1840106 . C T 455.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:33:484,33,0
CP000253.1 1840166 . C T 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1840481 . T C 3619.41 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.581;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.6208;MLEAC=1;MLEAF=0.500;MQ=58.34;MQ0=2;MQRankSum=13.085;QD=19.36;ReadPosRankSum=5.858;SOR=0.884 GT:AD:DP:GQ:PL 0/1:18,169:189:8:3647,0,8
CP000253.1 1840518 . G T 183.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.146;DP=223;Dels=0.00;ExcessHet=3.0103;FS=1.851;HaplotypeScore=13.2200;MLEAC=1;MLEAF=0.500;MQ=56.91;MQ0=2;MQRankSum=-14.255;QD=0.82;ReadPosRankSum=-5.619;SOR=0.963 GT:AD:DP:GQ:PL 0/1:187,36:223:99:212,0,3914
CP000253.1 1840644 . T C 1191.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.901;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.755;HaplotypeScore=19.5745;MLEAC=1;MLEAF=0.500;MQ=52.27;MQ0=11;MQRankSum=-14.960;QD=4.77;ReadPosRankSum=1.551;SOR=0.729 GT:AD:DP:GQ:PL 0/1:154,96:250:99:1220,0,3717
CP000253.1 1840665 . A G 1146.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.500;DP=250;Dels=0.00;ExcessHet=3.0103;FS=2.580;HaplotypeScore=25.8736;MLEAC=1;MLEAF=0.500;MQ=52.50;MQ0=12;MQRankSum=-14.954;QD=4.61;ReadPosRankSum=3.060;SOR=0.680 GT:AD:DP:GQ:PL 0/1:157,92:250:99:1175,0,3787
CP000253.1 1840671 . T C 1210.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.739;DP=244;Dels=0.00;ExcessHet=3.0103;FS=3.070;HaplotypeScore=18.4784;MLEAC=1;MLEAF=0.500;MQ=52.14;MQ0=12;MQRankSum=-14.735;QD=4.98;ReadPosRankSum=2.419;SOR=0.717 GT:AD:DP:GQ:PL 0/1:151,92:244:99:1239,0,3612
CP000253.1 1840673 . G T 1206.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.054;DP=242;Dels=0.00;ExcessHet=3.0103;FS=3.094;HaplotypeScore=17.5568;MLEAC=1;MLEAF=0.500;MQ=52.08;MQ0=12;MQRankSum=-14.560;QD=4.99;ReadPosRankSum=2.763;SOR=0.744 GT:AD:DP:GQ:PL 0/1:149,93:242:99:1235,0,3411
CP000253.1 1840685 . A G 1207.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.661;DP=246;Dels=0.00;ExcessHet=3.0103;FS=5.278;HaplotypeScore=14.7952;MLEAC=1;MLEAF=0.500;MQ=52.17;MQ0=12;MQRankSum=-14.871;QD=4.91;ReadPosRankSum=3.026;SOR=0.973 GT:AD:DP:GQ:PL 0/1:156,90:246:99:1236,0,3752
CP000253.1 1840704 . G A 1115.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.326;DP=245;Dels=0.00;ExcessHet=3.0103;FS=2.650;HaplotypeScore=22.8768;MLEAC=1;MLEAF=0.500;MQ=51.59;MQ0=16;MQRankSum=-14.606;QD=4.61;ReadPosRankSum=2.632;SOR=0.946 GT:AD:DP:GQ:PL 0/1:150,92:245:99:1144,0,3608
CP000253.1 1840722 . G A 1292.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.542;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.552;HaplotypeScore=16.3780;MLEAC=1;MLEAF=0.500;MQ=51.84;MQ0=15;MQRankSum=-14.530;QD=5.39;ReadPosRankSum=1.415;SOR=0.715 GT:AD:DP:GQ:PL 0/1:146,94:241:99:1321,0,3463
CP000253.1 1840728 . G A 1404.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.470;DP=249;Dels=0.00;ExcessHet=3.0103;FS=1.780;HaplotypeScore=14.7052;MLEAC=1;MLEAF=0.500;MQ=51.66;MQ0=18;MQRankSum=-14.751;QD=5.64;ReadPosRankSum=1.904;SOR=0.800 GT:AD:DP:GQ:PL 0/1:152,97:249:99:1433,0,3611
CP000253.1 1840731 . A G 1308.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.853;DP=247;Dels=0.00;ExcessHet=3.0103;FS=3.378;HaplotypeScore=17.6675;MLEAC=1;MLEAF=0.500;MQ=51.65;MQ0=18;MQRankSum=-14.550;QD=5.30;ReadPosRankSum=2.295;SOR=0.882 GT:AD:DP:GQ:PL 0/1:150,97:247:99:1337,0,3755
CP000253.1 1840743 . C T 1288.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.535;DP=235;Dels=0.00;ExcessHet=3.0103;FS=4.362;HaplotypeScore=24.3495;MLEAC=1;MLEAF=0.500;MQ=51.30;MQ0=19;MQRankSum=-14.277;QD=5.48;ReadPosRankSum=2.996;SOR=0.967 GT:AD:DP:GQ:PL 0/1:143,92:235:99:1317,0,3455
CP000253.1 1840747 . G T 1272.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.566;DP=247;Dels=0.00;ExcessHet=3.0103;FS=4.366;HaplotypeScore=27.6286;MLEAC=1;MLEAF=0.500;MQ=51.68;MQ0=19;MQRankSum=-14.173;QD=5.17;ReadPosRankSum=3.874;SOR=1.134 GT:AD:DP:GQ:PL 0/1:154,92:247:99:1301,0,3570
CP000253.1 1840758 . A G 1464.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.757;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.325;HaplotypeScore=30.9881;MLEAC=1;MLEAF=0.500;MQ=51.84;MQ0=16;MQRankSum=-14.631;QD=5.93;ReadPosRankSum=1.837;SOR=0.877 GT:AD:DP:GQ:PL 0/1:151,96:250:99:1493,0,3604
CP000253.1 1840767 . T A 1532.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.143;DP=249;Dels=0.00;ExcessHet=3.0103;FS=3.271;HaplotypeScore=29.0127;MLEAC=1;MLEAF=0.500;MQ=51.54;MQ0=16;MQRankSum=-14.186;QD=6.18;ReadPosRankSum=1.574;SOR=1.031 GT:AD:DP:GQ:PL 0/1:149,99:249:99:1561,0,3513
CP000253.1 1840847 . G A 1924.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.159;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3163;MLEAC=1;MLEAF=0.500;MQ=51.29;MQ0=15;MQRankSum=-12.962;QD=7.86;ReadPosRankSum=-1.608;SOR=0.776 GT:AD:DP:GQ:PL 0/1:132,113:246:99:1953,0,3083
CP000253.1 1840887 . A G 1630.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.757;DP=240;Dels=0.00;ExcessHet=3.0103;FS=4.209;HaplotypeScore=18.2429;MLEAC=1;MLEAF=0.500;MQ=52.12;MQ0=17;MQRankSum=-11.588;QD=6.91;ReadPosRankSum=-0.134;SOR=1.022 GT:AD:DP:GQ:PL 0/1:130,106:240:99:1659,0,2947
CP000253.1 1840923 . G C 1669.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.347;DP=234;Dels=0.00;ExcessHet=3.0103;FS=3.904;HaplotypeScore=18.4234;MLEAC=1;MLEAF=0.500;MQ=53.30;MQ0=15;MQRankSum=-10.811;QD=7.23;ReadPosRankSum=0.568;SOR=0.990 GT:AD:DP:GQ:PL 0/1:126,105:234:99:1698,0,2778
CP000253.1 1840932 . C G 1808.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.171;DP=240;Dels=0.00;ExcessHet=3.0103;FS=4.643;HaplotypeScore=20.6550;MLEAC=1;MLEAF=0.500;MQ=53.61;MQ0=15;MQRankSum=-10.720;QD=7.54;ReadPosRankSum=0.687;SOR=1.010 GT:AD:DP:GQ:PL 0/1:131,109:240:99:1837,0,3031
CP000253.1 1840965 . T A 1895.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.918;DP=247;Dels=0.00;ExcessHet=3.0103;FS=2.266;HaplotypeScore=21.4852;MLEAC=1;MLEAF=0.500;MQ=54.88;MQ0=14;MQRankSum=-9.170;QD=7.74;ReadPosRankSum=2.089;SOR=0.871 GT:AD:DP:GQ:PL 0/1:134,111:247:99:1924,0,3061
CP000253.1 1840974 . G A 1872.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.048;DP=246;Dels=0.00;ExcessHet=3.0103;FS=2.266;HaplotypeScore=23.6681;MLEAC=1;MLEAF=0.500;MQ=55.02;MQ0=14;MQRankSum=-8.940;QD=7.64;ReadPosRankSum=2.230;SOR=0.871 GT:AD:DP:GQ:PL 0/1:134,111:246:99:1901,0,3134
CP000253.1 1840983 . C G 1776.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.030;DP=242;Dels=0.00;ExcessHet=3.0103;FS=2.259;HaplotypeScore=24.1571;MLEAC=1;MLEAF=0.500;MQ=55.07;MQ0=14;MQRankSum=-8.629;QD=7.37;ReadPosRankSum=2.083;SOR=0.849 GT:AD:DP:GQ:PL 0/1:129,112:242:99:1805,0,3006
CP000253.1 1840986 . A G 1891.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.033;DP=243;Dels=0.00;ExcessHet=3.0103;FS=1.605;HaplotypeScore=26.8875;MLEAC=1;MLEAF=0.500;MQ=55.23;MQ0=14;MQRankSum=-8.497;QD=7.79;ReadPosRankSum=2.088;SOR=0.808 GT:AD:DP:GQ:PL 0/1:130,113:243:99:1920,0,3086
CP000253.1 1841010 . T G 2073.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.191;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3961;MLEAC=1;MLEAF=0.500;MQ=56.51;MQ0=11;MQRankSum=-6.851;QD=8.43;ReadPosRankSum=1.802;SOR=0.598 GT:AD:DP:GQ:PL 0/1:132,114:246:99:2102,0,3228
CP000253.1 1841028 . G A 2312.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.453;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.474;HaplotypeScore=37.7715;MLEAC=1;MLEAF=0.500;MQ=57.75;MQ0=8;MQRankSum=-5.070;QD=9.48;ReadPosRankSum=0.817;SOR=0.736 GT:AD:DP:GQ:PL 0/1:128,116:245:99:2341,0,2943
CP000253.1 1841067 . G A 2494.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.392;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1557;MLEAC=1;MLEAF=0.500;MQ=59.11;MQ0=3;MQRankSum=-3.485;QD=9.98;ReadPosRankSum=1.594;SOR=0.768 GT:AD:DP:GQ:PL 0/1:140,110:250:99:2523,0,3243
CP000253.1 1841127 . T G 2675.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.337;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.2946;MLEAC=1;MLEAF=0.500;MQ=59.36;MQ0=0;MQRankSum=-3.551;QD=10.97;ReadPosRankSum=-0.029;SOR=0.741 GT:AD:DP:GQ:PL 0/1:135,109:247:99:2704,0,3159
CP000253.1 1841157 . T A 2722.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.227;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.463;HaplotypeScore=32.6019;MLEAC=1;MLEAF=0.500;MQ=58.92;MQ0=0;MQRankSum=-5.181;QD=10.93;ReadPosRankSum=-0.386;SOR=0.683 GT:AD:DP:GQ:PL 0/1:138,111:250:99:2751,0,3354
CP000253.1 1841187 . A T 2483.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.083;DP=244;Dels=0.00;ExcessHet=3.0103;FS=2.850;HaplotypeScore=40.9838;MLEAC=1;MLEAF=0.500;MQ=56.86;MQ0=0;MQRankSum=-8.232;QD=10.18;ReadPosRankSum=-0.616;SOR=0.886 GT:AD:DP:GQ:PL 0/1:134,110:244:99:2512,0,3042
CP000253.1 1841214 . A G 2394.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.706;DP=246;Dels=0.00;ExcessHet=3.0103;FS=1.561;HaplotypeScore=34.1277;MLEAC=1;MLEAF=0.500;MQ=56.35;MQ0=2;MQRankSum=-8.575;QD=9.81;ReadPosRankSum=0.846;SOR=0.808 GT:AD:DP:GQ:PL 0/1:134,110:246:99:2423,0,3006
CP000253.1 1841217 . G A 2406.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.811;DP=248;Dels=0.00;ExcessHet=3.0103;FS=2.852;HaplotypeScore=30.7718;MLEAC=1;MLEAF=0.500;MQ=56.38;MQ0=2;MQRankSum=-8.753;QD=9.82;ReadPosRankSum=1.052;SOR=0.876 GT:AD:DP:GQ:PL 0/1:137,108:248:99:2435,0,3025
CP000253.1 1841232 . T C 2267.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.017;DP=244;Dels=0.00;ExcessHet=3.0103;FS=1.575;HaplotypeScore=20.6729;MLEAC=1;MLEAF=0.500;MQ=56.32;MQ0=2;MQRankSum=-8.876;QD=9.29;ReadPosRankSum=1.728;SOR=0.823 GT:AD:DP:GQ:PL 0/1:138,106:244:99:2296,0,3162
CP000253.1 1841235 . G A 2269.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.220;DP=243;Dels=0.00;ExcessHet=3.0103;FS=2.189;HaplotypeScore=16.9677;MLEAC=1;MLEAF=0.500;MQ=56.30;MQ0=2;MQRankSum=-8.847;QD=9.34;ReadPosRankSum=1.741;SOR=0.838 GT:AD:DP:GQ:PL 0/1:137,106:243:99:2298,0,3057
CP000253.1 1841250 . C A 2197.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.100;DP=241;Dels=0.00;ExcessHet=3.0103;FS=1.002;HaplotypeScore=24.7073;MLEAC=1;MLEAF=0.500;MQ=55.77;MQ0=2;MQRankSum=-9.108;QD=9.12;ReadPosRankSum=2.174;SOR=0.769 GT:AD:DP:GQ:PL 0/1:137,104:241:99:2226,0,3036
CP000253.1 1841253 . G A 2229.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.101;DP=241;Dels=0.00;ExcessHet=3.0103;FS=1.585;HaplotypeScore=23.8443;MLEAC=1;MLEAF=0.500;MQ=55.77;MQ0=2;MQRankSum=-9.242;QD=9.25;ReadPosRankSum=1.902;SOR=0.836 GT:AD:DP:GQ:PL 0/1:135,106:241:99:2258,0,3102
CP000253.1 1841259 . C T 2151.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.158;DP=240;Dels=0.00;ExcessHet=3.0103;FS=1.596;HaplotypeScore=30.4165;MLEAC=1;MLEAF=0.500;MQ=55.75;MQ0=2;MQRankSum=-9.201;QD=9.04;ReadPosRankSum=1.424;SOR=0.824 GT:AD:DP:GQ:PL 0/1:134,104:240:99:2180,0,3118
CP000253.1 1841265 . A G 2168.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.710;DP=246;Dels=0.00;ExcessHet=3.0103;FS=1.567;HaplotypeScore=30.4087;MLEAC=1;MLEAF=0.500;MQ=55.80;MQ0=2;MQRankSum=-9.286;QD=8.85;ReadPosRankSum=2.107;SOR=0.807 GT:AD:DP:GQ:PL 0/1:140,105:246:99:2197,0,3168
CP000253.1 1841286 . A G 1841.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.475;DP=235;Dels=0.00;ExcessHet=3.0103;FS=3.849;HaplotypeScore=27.6120;MLEAC=1;MLEAF=0.500;MQ=54.25;MQ0=11;MQRankSum=-10.384;QD=7.84;ReadPosRankSum=2.601;SOR=0.954 GT:AD:DP:GQ:PL 0/1:137,98:235:99:1870,0,3205
CP000253.1 1841295 . T C 1683.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.153;DP=231;Dels=0.00;ExcessHet=3.0103;FS=1.702;HaplotypeScore=28.3896;MLEAC=1;MLEAF=0.500;MQ=54.25;MQ0=11;MQRankSum=-9.960;QD=7.38;ReadPosRankSum=2.262;SOR=0.845 GT:AD:DP:GQ:PL 0/1:133,95:231:99:1712,0,3145
CP000253.1 1841307 . T A 1714.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.377;DP=249;Dels=0.00;ExcessHet=3.0103;FS=5.543;HaplotypeScore=18.5191;MLEAC=1;MLEAF=0.500;MQ=54.30;MQ0=11;MQRankSum=-11.523;QD=6.89;ReadPosRankSum=2.715;SOR=0.959 GT:AD:DP:GQ:PL 0/1:155,94:249:99:1743,0,3609
CP000253.1 1841310 . A G 1667.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.784;DP=238;Dels=0.00;ExcessHet=3.0103;FS=4.786;HaplotypeScore=29.1951;MLEAC=1;MLEAF=0.500;MQ=54.13;MQ0=11;MQRankSum=-11.003;QD=7.13;ReadPosRankSum=2.355;SOR=0.948 GT:AD:DP:GQ:PL 0/1:144,90:237:99:1696,0,3539
CP000253.1 1841328 . T A 1600.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.437;DP=242;Dels=0.00;ExcessHet=3.0103;FS=6.842;HaplotypeScore=22.1029;MLEAC=1;MLEAF=0.500;MQ=53.80;MQ0=12;MQRankSum=-11.579;QD=6.73;ReadPosRankSum=1.137;SOR=0.949 GT:AD:DP:GQ:PL 0/1:149,89:242:99:1629,0,3749
CP000253.1 1841373 . C T 1616.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.354;DP=250;Dels=0.00;ExcessHet=3.0103;FS=7.758;HaplotypeScore=20.9948;MLEAC=1;MLEAF=0.500;MQ=52.79;MQ0=12;MQRankSum=-13.731;QD=6.49;ReadPosRankSum=-2.288;SOR=1.150 GT:AD:DP:GQ:PL 0/1:160,89:250:99:1645,0,3775
CP000253.1 1841382 . G T 1425.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.888;DP=237;Dels=0.00;ExcessHet=3.0103;FS=7.101;HaplotypeScore=30.7553;MLEAC=1;MLEAF=0.500;MQ=52.72;MQ0=10;MQRankSum=-13.742;QD=6.04;ReadPosRankSum=-2.209;SOR=1.163 GT:AD:DP:GQ:PL 0/1:156,80:237:99:1454,0,3615
CP000253.1 1841400 . G A 1231.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.286;DP=233;Dels=0.00;ExcessHet=3.0103;FS=4.203;HaplotypeScore=27.4428;MLEAC=1;MLEAF=0.500;MQ=52.47;MQ0=9;MQRankSum=-14.171;QD=5.31;ReadPosRankSum=-1.067;SOR=0.929 GT:AD:DP:GQ:PL 0/1:157,75:233:99:1260,0,3557
CP000253.1 1841496 . C T 1691.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.332;DP=235;Dels=0.00;ExcessHet=3.0103;FS=6.856;HaplotypeScore=18.9919;MLEAC=1;MLEAF=0.500;MQ=50.20;MQ0=11;MQRankSum=-12.644;QD=7.26;ReadPosRankSum=-0.734;SOR=1.147 GT:AD:DP:GQ:PL 0/1:141,92:235:99:1720,0,3027
CP000253.1 1841520 . T A 1690.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.748;DP=237;Dels=0.00;ExcessHet=3.0103;FS=6.831;HaplotypeScore=25.9017;MLEAC=1;MLEAF=0.500;MQ=50.01;MQ0=12;MQRankSum=-13.006;QD=7.19;ReadPosRankSum=-0.346;SOR=1.124 GT:AD:DP:GQ:PL 0/1:143,92:237:99:1719,0,3197
CP000253.1 1841523 . G A 1628.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.388;DP=240;Dels=0.00;ExcessHet=3.0103;FS=6.799;HaplotypeScore=22.3964;MLEAC=1;MLEAF=0.500;MQ=50.14;MQ0=12;MQRankSum=-13.067;QD=6.79;ReadPosRankSum=0.041;SOR=1.129 GT:AD:DP:GQ:PL 0/1:147,93:240:99:1657,0,3225
CP000253.1 1841529 . A G 1689.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.474;DP=244;Dels=0.00;ExcessHet=3.0103;FS=5.765;HaplotypeScore=21.5287;MLEAC=1;MLEAF=0.500;MQ=50.10;MQ0=12;MQRankSum=-13.116;QD=6.95;ReadPosRankSum=0.321;SOR=1.086 GT:AD:DP:GQ:PL 0/1:149,94:244:99:1718,0,3254
CP000253.1 1841559 . G A 1841.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.010;DP=250;Dels=0.00;ExcessHet=3.0103;FS=5.564;HaplotypeScore=31.0883;MLEAC=1;MLEAF=0.500;MQ=49.73;MQ0=15;MQRankSum=-13.096;QD=7.43;ReadPosRankSum=-1.497;SOR=1.040 GT:AD:DP:GQ:PL 0/1:145,103:250:99:1870,0,3367
CP000253.1 1841589 . A G 2003.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.114;DP=250;Dels=0.00;ExcessHet=3.0103;FS=6.454;HaplotypeScore=26.6271;MLEAC=1;MLEAF=0.500;MQ=50.52;MQ0=13;MQRankSum=-13.129;QD=8.05;ReadPosRankSum=0.307;SOR=1.087 GT:AD:DP:GQ:PL 0/1:147,102:250:99:2032,0,3505
CP000253.1 1841598 . G A 1946.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.107;DP=245;Dels=0.00;ExcessHet=3.0103;FS=7.599;HaplotypeScore=25.9269;MLEAC=1;MLEAF=0.500;MQ=50.62;MQ0=13;MQRankSum=-12.917;QD=7.98;ReadPosRankSum=0.654;SOR=1.118 GT:AD:DP:GQ:PL 0/1:145,99:245:99:1975,0,3446
CP000253.1 1841604 . A G 1920.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.690;DP=247;Dels=0.00;ExcessHet=3.0103;FS=8.802;HaplotypeScore=25.0112;MLEAC=1;MLEAF=0.500;MQ=51.05;MQ0=12;MQRankSum=-12.945;QD=7.84;ReadPosRankSum=1.349;SOR=1.163 GT:AD:DP:GQ:PL 0/1:150,95:247:99:1949,0,3514
CP000253.1 1841607 . G A 1850.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.322;DP=250;Dels=0.00;ExcessHet=3.0103;FS=7.643;HaplotypeScore=22.0561;MLEAC=1;MLEAF=0.500;MQ=51.33;MQ0=12;MQRankSum=-13.094;QD=7.46;ReadPosRankSum=1.778;SOR=1.116 GT:AD:DP:GQ:PL 0/1:155,93:250:99:1879,0,3712
CP000253.1 1841612 . A G 1888.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.344;DP=247;Dels=0.00;ExcessHet=3.0103;FS=7.711;HaplotypeScore=17.5341;MLEAC=1;MLEAF=0.500;MQ=51.21;MQ0=12;MQRankSum=-12.999;QD=7.71;ReadPosRankSum=1.570;SOR=1.143 GT:AD:DP:GQ:PL 0/1:151,94:247:99:1917,0,3595
CP000253.1 1841613 . A T 1860.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.543;DP=249;Dels=0.00;ExcessHet=3.0103;FS=8.659;HaplotypeScore=18.3391;MLEAC=1;MLEAF=0.500;MQ=51.29;MQ0=12;MQRankSum=-12.654;QD=7.47;ReadPosRankSum=1.232;SOR=1.080 GT:AD:DP:GQ:PL 0/1:154,95:249:99:1889,0,3647
CP000253.1 1841655 . C T 2394.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.945;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.469;HaplotypeScore=39.9131;MLEAC=1;MLEAF=0.500;MQ=54.37;MQ0=6;MQRankSum=-9.746;QD=9.62;ReadPosRankSum=-1.078;SOR=0.733 GT:AD:DP:GQ:PL 0/1:137,112:249:99:2423,0,3272
CP000253.1 1841658 . A G 2359.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.865;DP=250;Dels=0.00;ExcessHet=3.0103;FS=1.034;HaplotypeScore=37.8613;MLEAC=1;MLEAF=0.500;MQ=54.42;MQ0=6;MQRankSum=-9.589;QD=9.48;ReadPosRankSum=-1.027;SOR=0.806 GT:AD:DP:GQ:PL 0/1:136,113:250:99:2388,0,3317
CP000253.1 1841676 . C T 2683.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.018;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.465;HaplotypeScore=49.1794;MLEAC=1;MLEAF=0.500;MQ=55.00;MQ0=5;MQRankSum=-9.281;QD=10.87;ReadPosRankSum=-1.747;SOR=0.660 GT:AD:DP:GQ:PL 0/1:120,127:249:99:2712,0,3023
CP000253.1 1841708 . A G 2760.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.197;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.5935;MLEAC=1;MLEAF=0.500;MQ=55.60;MQ0=2;MQRankSum=-9.872;QD=11.13;ReadPosRankSum=0.277;SOR=0.711 GT:AD:DP:GQ:PL 0/1:118,130:249:99:2789,0,2969
CP000253.1 1841712 . A T 2795.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.129;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.464;HaplotypeScore=28.6284;MLEAC=1;MLEAF=0.500;MQ=55.70;MQ0=1;MQRankSum=-10.318;QD=11.36;ReadPosRankSum=0.533;SOR=0.727 GT:AD:DP:GQ:PL 0/1:117,129:246:99:2824,0,2958
CP000253.1 1841727 . G A 3116.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.766;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.5767;MLEAC=1;MLEAF=0.500;MQ=55.84;MQ0=1;MQRankSum=-10.128;QD=12.93;ReadPosRankSum=-0.137;SOR=0.728 GT:AD:DP:GQ:PL 0/1:107,134:245:99:3145,0,2626
CP000253.1 1841739 . C T 3054.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.133;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2016;MLEAC=1;MLEAF=0.500;MQ=56.07;MQ0=1;MQRankSum=-10.404;QD=12.42;ReadPosRankSum=1.705;SOR=0.716 GT:AD:DP:GQ:PL 0/1:113,133:248:99:3083,0,2727
CP000253.1 1841742 . T G 2942.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.867;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6629;MLEAC=1;MLEAF=0.500;MQ=56.07;MQ0=1;MQRankSum=-10.600;QD=11.82;ReadPosRankSum=1.886;SOR=0.703 GT:AD:DP:GQ:PL 0/1:116,133:250:99:2971,0,2870
CP000253.1 1841751 . T G 2843.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.149;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2545;MLEAC=1;MLEAF=0.500;MQ=56.36;MQ0=0;MQRankSum=-10.602;QD=11.47;ReadPosRankSum=2.927;SOR=0.713 GT:AD:DP:GQ:PL 0/1:119,129:250:99:2872,0,2990
CP000253.1 1841808 . C T 3191.82 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.144;DP=250;Dels=0.00;ExcessHet=3.0103;FS=2.171;HaplotypeScore=35.0354;MLEAC=1;MLEAF=0.500;MQ=56.40;MQ0=0;MQRankSum=-10.542;QD=12.77;ReadPosRankSum=0.825;SOR=0.859 GT:AD:DP:GQ:PL 0/1:108,142:250:99:3220,0,2432
CP000253.1 1841841 . T A 3052.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.344;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.5217;MLEAC=1;MLEAF=0.500;MQ=56.01;MQ0=1;MQRankSum=-10.017;QD=12.46;ReadPosRankSum=0.416;SOR=0.644 GT:AD:DP:GQ:PL 0/1:111,134:247:99:3081,0,2707
CP000253.1 1841892 . G A 2394.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.709;DP=230;Dels=0.00;ExcessHet=3.0103;FS=1.091;HaplotypeScore=30.8476;MLEAC=1;MLEAF=0.500;MQ=56.40;MQ0=1;MQRankSum=-10.469;QD=10.46;ReadPosRankSum=1.145;SOR=0.879 GT:AD:DP:GQ:PL 0/1:117,112:230:99:2423,0,2703
CP000253.1 1841895 . G A 2370.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.935;DP=230;Dels=0.00;ExcessHet=3.0103;FS=1.652;HaplotypeScore=30.8734;MLEAC=1;MLEAF=0.500;MQ=56.40;MQ0=1;MQRankSum=-10.708;QD=10.31;ReadPosRankSum=1.272;SOR=0.839 GT:AD:DP:GQ:PL 0/1:120,110:230:99:2399,0,2824
CP000253.1 1841931 . G C 1785.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.397;DP=214;Dels=0.00;ExcessHet=3.0103;FS=1.821;HaplotypeScore=18.0401;MLEAC=1;MLEAF=0.500;MQ=56.12;MQ0=1;MQRankSum=-12.568;QD=8.42;ReadPosRankSum=1.243;SOR=0.940 GT:AD:DP:GQ:PL 0/1:123,89:214:99:1814,0,2824
CP000253.1 1842000 . G A 1236.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.148;DP=180;Dels=0.00;ExcessHet=3.0103;FS=7.202;HaplotypeScore=17.2986;MLEAC=1;MLEAF=0.500;MQ=56.28;MQ0=1;MQRankSum=-11.796;QD=6.87;ReadPosRankSum=-2.109;SOR=1.264 GT:AD:DP:GQ:PL 0/1:119,61:180:99:1265,0,2633
CP000253.1 1842102 . C A 62.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.293;DP=77;Dels=0.00;ExcessHet=3.0103;FS=6.264;HaplotypeScore=8.1404;MLEAC=1;MLEAF=0.500;MQ=56.85;MQ0=0;MQRankSum=-7.770;QD=0.82;ReadPosRankSum=-1.563;SOR=2.538 GT:AD:DP:GQ:PL 0/1:67,10:77:91:91,0,1488
CP000253.1 1843103 . A G 1127.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1156,81,0
CP000253.1 1843109 . T C 1171.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,46:46:84:1200,84,0
CP000253.1 1843111 . T C 1122.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:46:81:1151,81,0
CP000253.1 1843170 . C G 624.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.40;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:48:653,48,0
CP000253.1 1843187 . T C 266.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.64;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:24:295,24,0
CP000253.1 1843194 . T A 161.56 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.08;ReadPosRankSum=0.180;SOR=0.527 GT:AD:DP:GQ:PL 0/1:1,6:7:7:189,0,7
CP000253.1 1843200 . T G 165.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:194,15,0
CP000253.1 1843206 . C G 138.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:12:166,12,0
CP000253.1 1843228 . T A 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 1843246 . G A 89.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:117,9,0
CP000253.1 1843889 . T A 32.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.62;MQ0=0;QD=16.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:60,6,0
CP000253.1 1843895 . A T 32.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.62;MQ0=0;QD=16.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:60,6,0
CP000253.1 1843902 . T G 12.77 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.62;MQ0=0;QD=6.38;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:3:39,3,0
CP000253.1 1843904 . G A 44.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.62;MQ0=0;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0
CP000253.1 1843908 . A T 42.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.62;MQ0=0;QD=21.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0
CP000253.1 1843913 . C A 38.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.62;MQ0=0;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0
CP000253.1 1843917 . T G 11.83 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.62;MQ0=0;QD=5.91;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:3:38,3,0
CP000253.1 1843921 . G T 44.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.62;MQ0=0;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0
CP000253.1 1843925 . A G 49.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.62;MQ0=0;QD=24.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0
CP000253.1 1843931 . A G 88.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.19;MQ0=0;QD=29.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:116,9,0
CP000253.1 1843934 . C T 90.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.19;MQ0=0;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0
CP000253.1 1843949 . C T 90.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.19;MQ0=0;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0
CP000253.1 1843957 . C T 128.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.43;MQ0=0;QD=32.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:156,12,0
CP000253.1 1844559 . G A 3284.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3491;MLEAC=2;MLEAF=1.00;MQ=57.10;MQ0=0;QD=22.97;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3313,229,0
CP000253.1 1845378 . G A 1539.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4050;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.00;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1568,108,0
CP000253.1 1845576 . T C 984.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:43:69:1013,69,0
CP000253.1 1845607 . A T 1140.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1169,81,0
CP000253.1 1846400 . T G 450.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:479,33,0
CP000253.1 1846403 . C T 450.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:479,33,0
CP000253.1 1846440 . T A 445.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:474,33,0
CP000253.1 1846494 . T A 181.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:210,15,0
CP000253.1 1846496 . C T 162.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:191,15,0
CP000253.1 1846543 . C T 127.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0
CP000253.1 1846590 . A G 94.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:5:9:122,9,0
CP000253.1 1846591 . A G 89.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:117,9,0
CP000253.1 1846828 . C T 2236.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.1780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2265,157,0
CP000253.1 1846931 . A G 2568.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:113:99:2597,181,0
CP000253.1 1846942 . G T 2561.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.006;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.28;ReadPosRankSum=1.734;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,114:115:99:2590,178,0
CP000253.1 1847035 . G A 1913.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1999;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:85:99:1942,135,0
CP000253.1 1847094 . G A 1061.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:43:78:1090,78,0
CP000253.1 1847103 . A C 921.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4576;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:38:66:950,66,0
CP000253.1 1847192 . A G 756.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:54:785,54,0
CP000253.1 1847219 . T G 795.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:57:824,57,0
CP000253.1 1847299 . A G 732.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:51:761,51,0
CP000253.1 1847472 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1847484 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1847488 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1847623 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1847666 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1847681 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1847701 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1847801 . A T 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 1847871 . T C 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 1848189 . T G 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1848270 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1848321 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1848393 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1848418 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1848441 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1848444 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1848466 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1848477 . A G 61.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:89,6,0
CP000253.1 1848925 . A C 402.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:431,30,0
CP000253.1 1849083 . A T 578.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:607,42,0
CP000253.1 1849192 . T G 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 1849235 . A C 362.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:391,27,0
CP000253.1 1849276 . A T 483.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:36:512,36,0
CP000253.1 1849303 . A T 528.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:557,39,0
CP000253.1 1849325 . C A 532.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.796;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.31;ReadPosRankSum=-1.324;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,24:25:39:561,39,0
CP000253.1 1849349 . G A 590.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:619,42,0
CP000253.1 1849354 . A C 589.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:618,42,0
CP000253.1 1849449 . T C 680.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.96;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:709,48,0
CP000253.1 1849502 . G A 773.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:54:802,54,0
CP000253.1 1849503 . T C 773.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:54:802,54,0
CP000253.1 1859010 . T C 92.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:120,9,0
CP000253.1 1859127 . T A 956.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.25;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:985,69,0
CP000253.1 1859132 . C T 844.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:873,60,0
CP000253.1 1859304 . A T 1026.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.966;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-1.581;SOR=0.511 GT:AD:DP:GQ:PL 1/1:1,44:45:72:1055,72,0
CP000253.1 1859493 . C T 545.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.83;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:26:39:574,39,0
CP000253.1 1859520 . T C 801.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.67;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:38:57:830,57,0
CP000253.1 1859766 . C T 777.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:806,54,0
CP000253.1 1860211 . C T 1836.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1865,129,0
CP000253.1 1860297 . G A 2253.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2282,157,0
CP000253.1 1860337 . T A 2284.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2313,157,0
CP000253.1 1860382 . A T 1892.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,84:84:99:1921,132,0
CP000253.1 1860637 . T C 727.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.05;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:51:756,51,0
CP000253.1 1860715 . G A 463.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5585;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:33:492,33,0
CP000253.1 1860754 . G A 354.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:27:383,27,0
CP000253.1 1860832 . T C 226.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:255,18,0
CP000253.1 1860835 . A T 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1860847 . T A 90.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:118,9,0
CP000253.1 1860880 . T C 134.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:162,12,0
CP000253.1 1861046 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1861065 . C A 93.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:121,9,0
CP000253.1 1861103 . C A 212.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.645;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5105;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.28;ReadPosRankSum=0.842;SOR=1.198 GT:AD:DP:GQ:PL 1/1:1,9:10:18:241,18,0
CP000253.1 1861124 . T C 221.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:250,18,0
CP000253.1 1861145 . A G 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1861151 . A G 226.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:255,18,0
CP000253.1 1861158 . C T 158.90 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.534;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.86;ReadPosRankSum=1.534;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,7:8:15:187,15,0
CP000253.1 1861164 . T G 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 1861167 . G A 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 1861175 . A C 178.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:207,15,0
CP000253.1 1861199 . C A 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 1861222 . C A 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 1861280 . A G 137.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:165,12,0
CP000253.1 1861284 . T G 147.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.534;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.38;ReadPosRankSum=1.534;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,7:8:12:175,12,0
CP000253.1 1861315 . G C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1861343 . T A 235.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:264,18,0
CP000253.1 1861344 . A G 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 1861378 . T C 224.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:253,18,0
CP000253.1 1861380 . T G 181.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.21;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:15:210,15,0
CP000253.1 1861579 . T C 61.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:89,6,0
CP000253.1 1861657 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1861708 . G C 55.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:83,6,0
CP000253.1 1861718 . A G 45.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:73,6,0
CP000253.1 1861719 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1861845 . C T 97.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.21;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:125,9,0
CP000253.1 1861910 . T A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1861983 . A C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1861998 . A G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1862000 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1862001 . G T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1862150 . A G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1862244 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1862247 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1862289 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1862339 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1862340 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1862368 . G T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1862369 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1862375 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1862385 . T C 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1862417 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1862421 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1862463 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1862486 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1862499 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1862503 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1862509 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1862764 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1862852 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=7.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:41,3,0
CP000253.1 1862854 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1863073 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1863157 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1863163 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1863186 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1863192 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1863201 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1863203 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1863212 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1863213 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1863228 . T G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1863232 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 1863265 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1863270 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1863277 . T G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1863279 . G T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1863282 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1863285 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1863338 . T G 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1863400 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1863425 . A T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1863547 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1863559 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1863574 . C T 144.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:172,12,0
CP000253.1 1863592 . C A 183.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=22.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:212,15,0
CP000253.1 1863600 . C G 183.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=22.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:212,15,0
CP000253.1 1863614 . T C 183.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=22.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:212,15,0
CP000253.1 1863615 . A C 183.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=22.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:212,15,0
CP000253.1 1863625 . A G 183.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=22.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:212,15,0
CP000253.1 1863631 . A T 183.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=22.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:212,15,0
CP000253.1 1863642 . T G 183.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=22.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:212,15,0
CP000253.1 1863646 . T A 183.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=22.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:212,15,0
CP000253.1 1863655 . C G 172.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=21.61;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:201,15,0
CP000253.1 1863657 . G A 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.32;MQ0=0;QD=22.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 1863678 . G A 536.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.61;MQ0=0;QD=23.34;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:565,39,0
CP000253.1 1863686 . C A 312.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.84;MQ0=0;QD=24.06;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:341,24,0
CP000253.1 1863688 . C A 303.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.84;MQ0=0;QD=23.37;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:332,24,0
CP000253.1 1863690 . T A 312.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.84;MQ0=0;QD=24.06;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:341,24,0
CP000253.1 1863693 . G A 313.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.84;MQ0=0;QD=24.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:342,24,0
CP000253.1 1863714 . T A 317.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.00;MQ0=0;QD=22.70;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:346,24,0
CP000253.1 1863731 . T C 268.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.44;MQ0=0;QD=24.44;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:297,21,0
CP000253.1 1863733 . A T 268.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.44;MQ0=0;QD=24.44;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:297,21,0
CP000253.1 1863743 . A G 224.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.86;MQ0=0;QD=24.98;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:253,18,0
CP000253.1 1864297 . A T 353.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.56;MQ0=0;QD=27.21;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:382,27,0
CP000253.1 1864307 . C T 308.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.07;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:337,24,0
CP000253.1 1864308 . T A 309.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.16;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:338,24,0
CP000253.1 1864310 . T A 306.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.89;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:335,24,0
CP000253.1 1864316 . A G 308.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.07;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:337,24,0
CP000253.1 1864317 . G A 301.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:330,24,0
CP000253.1 1864320 . A G 308.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.07;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:337,24,0
CP000253.1 1864336 . T C 977.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.94;SOR=1.483 GT:AD:DP:GQ:PL 1/1:0,35:35:72:1006,72,0
CP000253.1 1864349 . A G 1102.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.28;SOR=1.387 GT:AD:DP:GQ:PL 1/1:0,39:40:81:1131,81,0
CP000253.1 1864385 . G A 1227.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.55;SOR=1.455 GT:AD:DP:GQ:PL 1/1:0,43:43:90:1256,90,0
CP000253.1 1864396 . C T 1186.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.929;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.26;ReadPosRankSum=-0.361;SOR=1.513 GT:AD:DP:GQ:PL 1/1:1,41:42:87:1215,87,0
CP000253.1 1864397 . T C 1171.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.989;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.90;ReadPosRankSum=-0.361;SOR=1.513 GT:AD:DP:GQ:PL 1/1:1,41:42:87:1200,87,0
CP000253.1 1864405 . C T 1230.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,46:47:93:1259,93,0
CP000253.1 1864449 . C T 1699.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8189;MLEAC=2;MLEAF=1.00;MQ=59.73;MQ0=0;QD=26.98;SOR=1.366 GT:AD:DP:GQ:PL 1/1:0,63:65:99:1728,123,0
CP000253.1 1865092 . A T 299.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:328,24,0
CP000253.1 1865094 . C T 316.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:345,24,0
CP000253.1 1865120 . G T 308.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:337,24,0
CP000253.1 1865135 . G A 308.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:337,24,0
CP000253.1 1865140 . C T 269.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:298,21,0
CP000253.1 1865235 . C G 487.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:39:516,39,0
CP000253.1 1865265 . A C 455.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:484,36,0
CP000253.1 1865277 . C A 444.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:36:473,36,0
CP000253.1 1865525 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1865620 . T C 1076.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1105,78,0
CP000253.1 1865658 . C T 1047.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1076,75,0
CP000253.1 1865808 . G A 1588.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1617,111,0
CP000253.1 1866445 . C T 3385.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3414,238,0
CP000253.1 1866739 . C T 3789.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.112;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3889;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.54;ReadPosRankSum=-0.406;SOR=0.368 GT:AD:DP:GQ:PL 1/1:3,158:162:99:3818,268,0
CP000253.1 1866811 . T C 3729.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,153:155:99:3758,265,0
CP000253.1 1866831 . G A 3756.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,154:155:99:3785,265,0
CP000253.1 1866832 . G A 3695.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3724,259,0
CP000253.1 1866937 . T C 2744.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.51;ReadPosRankSum=-1.222;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,111:112:99:2773,196,0
CP000253.1 1866943 . C G 2634.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,110:112:99:2663,193,0
CP000253.1 1866952 . T C 2474.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2503,181,0
CP000253.1 1866958 . C T 2464.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.947 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2493,178,0
CP000253.1 1866961 . T C 2403.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.903;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=-1.364;SOR=0.312 GT:AD:DP:GQ:PL 1/1:1,93:94:99:2432,172,0
CP000253.1 1866970 . G C 2112.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=59.2098;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2141,156,0
CP000253.1 1866989 . A T 1546.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1575,114,0
CP000253.1 1866996 . C T 1643.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6214;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.40;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1672,120,0
CP000253.1 1866998 . T C 1596.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.747;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6214;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.75;ReadPosRankSum=-1.148;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,61:62:99:1625,117,0
CP000253.1 1867018 . T C 1788.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1817,129,0
CP000253.1 1867033 . T A 2688.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.826;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.37;ReadPosRankSum=0.427;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,105:106:99:2717,193,0
CP000253.1 1867081 . A C 3640.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.410;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.27;ReadPosRankSum=-0.025;SOR=0.748 GT:AD:DP:GQ:PL 1/1:2,148:152:99:3669,262,0
CP000253.1 1867147 . C T 4841.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,203:203:99:4870,334,0
CP000253.1 1867315 . T A 4223.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.054;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7010;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.34;ReadPosRankSum=0.048;SOR=0.750 GT:AD:DP:GQ:PL 1/1:2,179:181:99:4252,256,0
CP000253.1 1867321 . A G 4213.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6116;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4242,295,0
CP000253.1 1867384 . C T 2930.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,119:120:99:2959,208,0
CP000253.1 1867393 . A T 2191.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2220,157,0
CP000253.1 1867394 . G A 2192.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2221,157,0
CP000253.1 1867399 . T C 2188.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5439;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2217,157,0
CP000253.1 1867405 . T G 2202.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.977;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5104;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.91;ReadPosRankSum=1.448;SOR=0.613 GT:AD:DP:GQ:PL 1/1:1,84:85:99:2231,157,0
CP000253.1 1867407 . A T 2153.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6163;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2182,154,0
CP000253.1 1867414 . A T 2145.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0598;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2174,154,0
CP000253.1 1867417 . C T 2187.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2216,157,0
CP000253.1 1867853 . T C 3890.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3783;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,163:163:99:3919,274,0
CP000253.1 1867929 . T A 2952.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7568;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,120:122:99:2981,211,0
CP000253.1 1868442 . G A 2650.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2679,190,0
CP000253.1 1868556 . C T 2581.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2610,184,0
CP000253.1 1868565 . C T 2472.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2501,178,0
CP000253.1 1868733 . T C 1109.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:81:1138,81,0
CP000253.1 1868800 . A T 1146.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.67;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:44:84:1175,84,0
CP000253.1 1868877 . T A 3067.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=1.074 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3096,223,0
CP000253.1 1869543 . T A 2222.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2251,157,0
CP000253.1 1870155 . G A 1032.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6841;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1061,75,0
CP000253.1 1870329 . A T 2565.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.759;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0538;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.40;ReadPosRankSum=0.652;SOR=0.757 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2594,184,0
CP000253.1 1870449 . C T 3853.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.091;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9919;MLEAC=2;MLEAF=1.00;MQ=59.43;MQ0=0;MQRankSum=13.204;QD=22.02;ReadPosRankSum=3.622;SOR=0.729 GT:AD:DP:GQ:PL 1/1:6,169:176:99:3882,152,0
CP000253.1 1870613 . T C 2822.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2637;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2851,202,0
CP000253.1 1870972 . C T 656.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:685,48,0
CP000253.1 1870996 . T C 624.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:653,45,0
CP000253.1 1871011 . T C 498.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:527,36,0
CP000253.1 1871017 . T A 445.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:474,33,0
CP000253.1 1871019 . A G 444.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:473,33,0
CP000253.1 1871022 . A T 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 1871023 . C T 432.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:461,33,0
CP000253.1 1871031 . T C 446.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:475,33,0
CP000253.1 1871032 . T C 452.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:481,33,0
CP000253.1 1871033 . G C 446.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:475,33,0
CP000253.1 1871065 . T A 266.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:295,21,0
CP000253.1 1871067 . A G 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 1871299 . T A 145.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:173,12,0
CP000253.1 1871390 . G A 483.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:36:512,36,0
CP000253.1 1871438 . G A 530.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:559,39,0
CP000253.1 1871443 . G A 492.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:521,36,0
CP000253.1 1871538 . C A 536.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:565,39,0
CP000253.1 1871659 . A G 2030.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2059,141,0
CP000253.1 1871721 . A G 1990.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0528;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2019,138,0
CP000253.1 1871722 . C G 2034.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0633;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2063,141,0
CP000253.1 1871743 . A G 2036.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.320;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7672;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.15;ReadPosRankSum=1.418;SOR=0.259 GT:AD:DP:GQ:PL 1/1:1,87:88:99:2065,141,0
CP000253.1 1871778 . A C 1937.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,87:87:99:1966,135,0
CP000253.1 1871944 . A C 1037.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0247;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1066,75,0
CP000253.1 1871954 . C T 1221.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.278;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=1.088;SOR=0.823 GT:AD:DP:GQ:PL 1/1:2,47:49:52:1250,52,0
CP000253.1 1872095 . G A 4311.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.803;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6686;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.50;ReadPosRankSum=-2.188;SOR=1.034 GT:AD:DP:GQ:PL 1/1:2,174:176:99:4340,265,0
CP000253.1 1872203 . G T 5936.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.889;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.135;HaplotypeScore=17.6851;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.04;ReadPosRankSum=0.933;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,246:250:99:5965,384,0
CP000253.1 1872314 . C T 5896.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3560;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,243:243:99:5925,412,0
CP000253.1 1872364 . T C 5309.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.805 GT:AD:DP:GQ:PL 1/1:0,224:224:99:5338,373,0
CP000253.1 1872404 . A T 5112.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,200:200:99:5141,361,0
CP000253.1 1872407 . G A 5003.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,199:200:99:5032,361,0
CP000253.1 1872476 . A T 3184.79 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3213,226,0
CP000253.1 1872602 . A G 1600.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1629,111,0
CP000253.1 1873463 . T A 813.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:60:842,60,0
CP000253.1 1873757 . G C 893.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:38:66:922,66,0
CP000253.1 1873810 . A T 427.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:33:456,33,0
CP000253.1 1873875 . A T 406.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.12;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,15:15:33:435,33,0
CP000253.1 1873905 . T C 419.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,15:15:33:448,33,0
CP000253.1 1873911 . G T 377.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.06;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:14:30:406,30,0
CP000253.1 1873916 . T C 380.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.20;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:30:409,30,0
CP000253.1 1874016 . A T 348.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.06;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:27:377,27,0
CP000253.1 1874111 . G A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1874276 . T G 1337.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.23;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:93:1366,93,0
CP000253.1 1874328 . A C 1309.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.79;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:93:1338,93,0
CP000253.1 1874343 . C T 1326.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.824;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.11;ReadPosRankSum=0.405;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,59:61:93:1355,93,0
CP000253.1 1874375 . C G 30.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.146;DP=48;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=46.1534;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=0.65;ReadPosRankSum=-3.912;SOR=0.563 GT:AD:DP:GQ:PL 0/1:41,6:47:59:59,0,859
CP000253.1 1874376 . G T 883.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.085;DP=42;Dels=0.00;ExcessHet=3.0103;FS=3.222;HaplotypeScore=44.3974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.04;ReadPosRankSum=0.248;SOR=0.453 GT:AD:DP:GQ:PL 1/1:1,41:42:65:912,65,0
CP000253.1 1874378 . T C 942.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=44.2753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:66:971,66,0
CP000253.1 1874963 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1875368 . C T 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 1875734 . T C 1271.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:55:90:1300,90,0
CP000253.1 1876064 . G A 1427.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4885;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1456,102,0
CP000253.1 1876286 . T G 2243.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8726;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2272,163,0
CP000253.1 1876419 . T A 3413.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3442,241,0
CP000253.1 1876452 . A G 3571.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3600,250,0
CP000253.1 1876503 . A C 3301.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4994;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.09;ReadPosRankSum=0.036;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,142:143:99:3330,229,0
CP000253.1 1876782 . T C 2090.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.875;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9138;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.89;ReadPosRankSum=0.331;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,83:85:99:2119,150,0
CP000253.1 1877411 . T C 663.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:48:692,48,0
CP000253.1 1879153 . A C 1448.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6906;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1477,102,0
CP000253.1 1879376 . T C 1171.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1200,84,0
CP000253.1 1880060 . T A 1707.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1736,120,0
CP000253.1 1881544 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 1881704 . A G 963.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:992,69,0
CP000253.1 1881712 . A T 902.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.442;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9712;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.52;ReadPosRankSum=0.197;SOR=0.788 GT:AD:DP:GQ:PL 1/1:2,42:44:24:931,24,0
CP000253.1 1881750 . G A 1017.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:72:1046,72,0
CP000253.1 1881753 . A G 1146.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.797;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.94;ReadPosRankSum=-0.312;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,49:50:81:1175,81,0
CP000253.1 1881771 . T C 1328.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6154;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1357,93,0
CP000253.1 1881775 . A C 1404.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1433,99,0
CP000253.1 1881778 . G A 1410.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1439,99,0
CP000253.1 1882006 . C T 490.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.485;DP=136;Dels=0.00;ExcessHet=3.0103;FS=10.435;HaplotypeScore=7.0946;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=3.61;ReadPosRankSum=-7.938;SOR=1.072 GT:AD:DP:GQ:PL 0/1:95,41:136:99:519,0,1751
CP000253.1 1882012 . C G 498.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.172;DP=135;Dels=0.00;ExcessHet=3.0103;FS=12.217;HaplotypeScore=4.5088;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=3.72;ReadPosRankSum=-6.931;SOR=1.054 GT:AD:DP:GQ:PL 0/1:93,41:135:99:527,0,1705
CP000253.1 1882021 . C A 588.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.271;DP=130;Dels=0.00;ExcessHet=3.0103;FS=13.547;HaplotypeScore=7.9544;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=4.53;ReadPosRankSum=-7.252;SOR=1.047 GT:AD:DP:GQ:PL 0/1:84,46:130:99:617,0,1461
CP000253.1 1882027 . T A 598.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.090;DP=128;Dels=0.00;ExcessHet=3.0103;FS=10.462;HaplotypeScore=8.0338;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=4.68;ReadPosRankSum=-6.346;SOR=0.998 GT:AD:DP:GQ:PL 0/1:83,45:128:99:627,0,1405
CP000253.1 1882030 . C G 693.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.599;DP=130;Dels=0.00;ExcessHet=3.0103;FS=11.930;HaplotypeScore=9.9212;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=5.34;ReadPosRankSum=-6.401;SOR=1.059 GT:AD:DP:GQ:PL 0/1:81,49:130:99:722,0,1410
CP000253.1 1882035 . T C 678.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.943;DP=128;Dels=0.00;ExcessHet=3.0103;FS=13.700;HaplotypeScore=13.6033;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=5.30;ReadPosRankSum=-5.981;SOR=1.056 GT:AD:DP:GQ:PL 0/1:79,49:128:99:707,0,1353
CP000253.1 1882055 . G T 1242.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.334;DP=122;Dels=0.00;ExcessHet=3.0103;FS=12.015;HaplotypeScore=17.9909;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=10.19;ReadPosRankSum=4.720;SOR=0.910 GT:AD:DP:GQ:PL 0/1:51,71:122:99:1271,0,714
CP000253.1 1882059 . G A 1206.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.438;DP=120;Dels=0.00;ExcessHet=3.0103;FS=12.596;HaplotypeScore=16.3543;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=10.14;ReadPosRankSum=4.892;SOR=0.912 GT:AD:DP:GQ:PL 0/1:50,69:120:99:1235,0,713
CP000253.1 1882380 . G A 4546.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,204:204:99:4575,313,0
CP000253.1 1882877 . T A 1471.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1500,105,0
CP000253.1 1883069 . A G 3568.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.023;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.30;ReadPosRankSum=-1.613;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,159:160:99:3597,247,0
CP000253.1 1883122 . T G 3524.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.389;DP=161;Dels=0.00;ExcessHet=3.0103;FS=2.124;HaplotypeScore=13.6130;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.89;ReadPosRankSum=2.156;SOR=0.284 GT:AD:DP:GQ:PL 1/1:4,157:161:99:3553,205,0
CP000253.1 1883230 . T C 2661.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2690,187,0
CP000253.1 1883465 . C T 948.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1858;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:69:977,69,0
CP000253.1 1883648 . A C 401.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:430,30,0
CP000253.1 1884087 . A G 4275.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4304,292,0
CP000253.1 1884554 . T C 38.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:66,6,0
CP000253.1 1885096 . A T 2687.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,118:119:99:2716,187,0
CP000253.1 1885609 . G A 678.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.15;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:25:51:707,51,0
CP000253.1 1885788 . C T 2299.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=1.046 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2328,163,0
CP000253.1 1885933 . C T 3424.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7883;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3453,244,0
CP000253.1 1886023 . G A 3938.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3967,286,0
CP000253.1 1886044 . A G 4235.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.082;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4562;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.36;ReadPosRankSum=1.949;SOR=0.152 GT:AD:DP:GQ:PL 1/1:3,164:169:99:4264,307,0
CP000253.1 1886532 . A G 261.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:290,21,0
CP000253.1 1886573 . C A 222.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:251,18,0
CP000253.1 1887599 . T C 84.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.07;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:9:112,9,0
CP000253.1 1887810 . A G 313.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:342,24,0
CP000253.1 1888120 . T C 917.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:66:946,66,0
CP000253.1 1888174 . A G 814.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:60:843,60,0
CP000253.1 1888366 . A G 2361.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2583;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2390,172,0
CP000253.1 1888393 . C A 2448.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2477,175,0
CP000253.1 1888435 . G A 2637.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2666,187,0
CP000253.1 1888441 . T A 2624.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5804;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,112:113:99:2653,184,0
CP000253.1 1888462 . A G 2668.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2697,187,0
CP000253.1 1888561 . T C 2281.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2310,169,0
CP000253.1 1888658 . G A 1943.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1972,141,0
CP000253.1 1888663 . A G 1915.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1944,141,0
CP000253.1 1888759 . A T 1293.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:93:1322,93,0
CP000253.1 1888768 . A G 1292.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:96:1321,96,0
CP000253.1 1888885 . A T 1238.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2176;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.53;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:90:1267,90,0
CP000253.1 1888890 . T C 1231.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2567;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.37;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:90:1260,90,0
CP000253.1 1888925 . C A 1181.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.850;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.14;ReadPosRankSum=0.480;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,46:47:87:1210,87,0
CP000253.1 1889124 . T A 3583.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4232;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,158:160:99:3612,253,0
CP000253.1 1889200 . A G 3188.81 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3569;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3217,223,0
CP000253.1 1889408 . G A 245.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.31;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:21:274,21,0
CP000253.1 1889409 . T C 218.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:18:247,18,0
CP000253.1 1889473 . A G 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 1889645 . G C 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 1889674 . G T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1889728 . A G 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 1890131 . G A 745.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=42.79;MQ0=0;QD=19.12;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:54:774,54,0
CP000253.1 1890152 . G A 745.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.79;MQ0=0;QD=19.12;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:54:774,54,0
CP000253.1 1890162 . T A 745.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.79;MQ0=0;QD=19.12;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:54:774,54,0
CP000253.1 1890189 . T C 733.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8273;MLEAC=2;MLEAF=1.00;MQ=42.24;MQ0=0;QD=19.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:54:762,54,0
CP000253.1 1890191 . G A 741.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8273;MLEAC=2;MLEAF=1.00;MQ=42.24;MQ0=0;QD=19.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:54:770,54,0
CP000253.1 1890192 . A G 741.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=42.24;MQ0=0;QD=19.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:54:770,54,0
CP000253.1 1890195 . T C 728.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=42.24;MQ0=0;QD=19.70;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:38:54:757,54,0
CP000253.1 1890207 . G A 741.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.24;MQ0=0;QD=19.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:54:770,54,0
CP000253.1 1890211 . T C 732.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=41.66;MQ0=0;QD=19.80;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:54:761,54,0
CP000253.1 1890217 . C T 736.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=41.66;MQ0=0;QD=19.91;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:54:765,54,0
CP000253.1 1890219 . C T 693.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=41.66;MQ0=0;QD=18.75;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:51:722,51,0
CP000253.1 1890230 . G A 737.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=41.66;MQ0=0;QD=19.94;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:54:766,54,0
CP000253.1 1890234 . T G 691.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.36;MQ0=0;QD=19.76;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:51:720,51,0
CP000253.1 1890240 . A G 681.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=40.36;MQ0=0;QD=19.48;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:51:710,51,0
CP000253.1 1890268 . A G 602.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.08;MQ0=0;QD=19.44;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:45:631,45,0
CP000253.1 1890273 . T C 513.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.055;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=39.58;MQ0=0;MQRankSum=-1.904;QD=16.57;ReadPosRankSum=2.375;SOR=0.760 GT:AD:DP:GQ:PL 0/1:2,29:31:0:539,0,0
CP000253.1 1890274 . G A 507.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.785;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=39.58;MQ0=0;MQRankSum=-1.904;QD=16.38;ReadPosRankSum=2.375;SOR=0.760 GT:AD:DP:GQ:PL 0/1:2,29:31:0:533,0,0
CP000253.1 1890288 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1890289 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1890292 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1890293 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1890317 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1890325 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1890347 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1890351 . T G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1890357 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1890360 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1890386 . T C 40.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=50.20;MQ0=0;QD=13.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:68,6,0
CP000253.1 1890681 . C T 358.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:387,27,0
CP000253.1 1891536 . C G 412.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.52;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:16:33:441,33,0
CP000253.1 1891562 . C T 380.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.20;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:30:409,30,0
CP000253.1 1891604 . C T 523.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:39:552,39,0
CP000253.1 1891748 . T C 728.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:32:54:757,54,0
CP000253.1 1891854 . A G 985.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1014,72,0
CP000253.1 1892207 . A T 4304.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1538;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4333,307,0
CP000253.1 1892274 . C T 4685.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,197:197:99:4714,328,0
CP000253.1 1893120 . A T 4357.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3514;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,167:169:99:4386,310,0
CP000253.1 1893180 . T C 2348.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.63;SOR=1.165 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2377,172,0
CP000253.1 1893308 . T G 1384.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.70;SOR=1.519 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1413,102,0
CP000253.1 1893317 . T C 1415.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.712;DP=55;Dels=0.00;ExcessHet=3.0103;FS=4.607;HaplotypeScore=2.7770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.22;ReadPosRankSum=1.513;SOR=1.499 GT:AD:DP:GQ:PL 1/1:1,53:55:86:1444,86,0
CP000253.1 1893633 . T A 2674.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5544;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2703,190,0
CP000253.1 1893642 . T C 2535.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.035;DP=101;Dels=0.00;ExcessHet=3.0103;FS=4.023;HaplotypeScore=6.5471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.11;ReadPosRankSum=1.564;SOR=0.976 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2564,181,0
CP000253.1 1893909 . A G 607.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.96;ReadPosRankSum=-0.180;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,28:29:45:636,45,0
CP000253.1 1894149 . T G 1720.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1749,120,0
CP000253.1 1894366 . G T 2539.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2568,175,0
CP000253.1 1894381 . A T 2454.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:108:99:2483,169,0
CP000253.1 1894774 . C T 190.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:219,15,0
CP000253.1 1894825 . T A 329.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:358,24,0
CP000253.1 1895772 . A C 94.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:122,9,0
CP000253.1 1896603 . A G 456.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:22:33:485,33,0
CP000253.1 1896937 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1896947 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 1896983 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1896988 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 1898148 . G A 11.83 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=5.55;MQ0=51;QD=0.23;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,52:52:3:38,3,0
CP000253.1 1898180 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=5.55;MQ0=51;QD=0.28;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,52:52:3:41,3,0
CP000253.1 1898302 . A G 100.03 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=5.87;MQ0=106;QD=0.91;SOR=3.258 GT:AD:DP:GQ:PL 1/1:1,109:110:12:128,12,0
CP000253.1 1898328 . C A 99.03 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=5.98;MQ0=102;QD=0.93;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,106:106:12:127,12,0
CP000253.1 1898336 . C T 75.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.150;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=5.89;MQ0=105;MQRankSum=0.319;QD=0.69;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 1/1:1,108:109:9:103,9,0
CP000253.1 1898405 . G A 93.28 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=8.05;MQ0=75;QD=1.15;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,81:81:9:121,9,0
CP000253.1 1898529 . T C 343.78 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=28.87;MQ0=8;QD=9.55;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,36:36:27:372,27,0
CP000253.1 1898594 . G A 616.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.5784;MLEAC=2;MLEAF=1.00;MQ=27.24;MQ0=8;QD=9.21;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,67:67:48:645,48,0
CP000253.1 1898672 . T A 571.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5592;MLEAC=2;MLEAF=1.00;MQ=26.72;MQ0=0;QD=9.86;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:58:45:600,45,0
CP000253.1 1900659 . G T 3848.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.475;DP=147;Dels=0.00;ExcessHet=3.0103;FS=3.468;HaplotypeScore=36.7971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.36;ReadPosRankSum=0.237;SOR=0.658 GT:AD:DP:GQ:PL 1/1:1,145:147:99:3877,251,0
CP000253.1 1901018 . G T 4132.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.357;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.0240;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.84;ReadPosRankSum=-0.575;SOR=0.111 GT:AD:DP:GQ:PL 1/1:2,152:156:99:4161,307,0
CP000253.1 1901477 . T A 1416.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.606;DP=91;Dels=0.00;ExcessHet=3.0103;FS=7.939;HaplotypeScore=19.8527;MLEAC=1;MLEAF=0.500;MQ=47.02;MQ0=17;MQRankSum=5.491;QD=15.57;ReadPosRankSum=-3.474;SOR=1.466 GT:AD:DP:GQ:PL 0/1:34,57:91:99:1445,0,101
CP000253.1 1904146 . T C 42.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.037;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5841;MLEAC=1;MLEAF=0.500;MQ=10.06;MQ0=137;MQRankSum=-0.587;QD=0.26;ReadPosRankSum=0.750;SOR=0.283 GT:AD:DP:GQ:PL 0/1:147,16:164:71:71,0,515
CP000253.1 1904178 . G T 106.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.831;DP=210;Dels=0.00;ExcessHet=3.0103;FS=5.883;HaplotypeScore=5.4493;MLEAC=1;MLEAF=0.500;MQ=9.53;MQ0=179;MQRankSum=-1.630;QD=0.51;ReadPosRankSum=1.017;SOR=0.027 GT:AD:DP:GQ:PL 0/1:128,81:210:99:135,0,578
CP000253.1 1904468 . C T 275.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.015;DP=189;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3986;MLEAC=1;MLEAF=0.500;MQ=23.11;MQ0=118;MQRankSum=-2.824;QD=1.47;ReadPosRankSum=3.706;SOR=0.210 GT:AD:DP:GQ:PL 0/1:111,77:188:99:304,0,1055
CP000253.1 1904470 . A C 275.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.187;DP=187;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4119;MLEAC=1;MLEAF=0.500;MQ=23.23;MQ0=116;MQRankSum=-2.824;QD=1.49;ReadPosRankSum=3.875;SOR=0.210 GT:AD:DP:GQ:PL 0/1:108,77:185:99:304,0,1040
CP000253.1 1904494 . T G 272.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.051;DP=186;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=427.2161;MLEAC=1;MLEAF=0.500;MQ=23.11;MQ0=116;MQRankSum=-2.937;QD=1.49;ReadPosRankSum=4.133;SOR=0.153 GT:AD:DP:GQ:PL 0/1:109,74:184:99:301,0,1017
CP000253.1 1904598 . C A 658.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.127;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.973;HaplotypeScore=4.4402;MLEAC=1;MLEAF=0.500;MQ=29.85;MQ0=75;MQRankSum=6.315;QD=4.74;ReadPosRankSum=5.595;SOR=0.855 GT:AD:DP:GQ:PL 0/1:103,36:141:99:687,0,556
CP000253.1 1904905 . G T 2935.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0689;MLEAC=2;MLEAF=1.00;MQ=50.33;MQ0=30;QD=20.39;SOR=1.356 GT:AD:DP:GQ:PL 1/1:25,119:144:99:2964,220,0
CP000253.1 1904906 . A C 2893.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0689;MLEAC=2;MLEAF=1.00;MQ=50.33;MQ0=30;QD=20.24;SOR=1.392 GT:AD:DP:GQ:PL 1/1:25,118:144:99:2922,217,0
CP000253.1 1906604 . G C 307.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:336,24,0
CP000253.1 1906711 . A T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 1906943 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1907041 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1907166 . G A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 1907601 . C T 1075.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.95;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:75:1104,75,0
CP000253.1 1907869 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 1907911 . A T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1908354 . G T 1066.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:75:1095,75,0
CP000253.1 1908490 . C T 1333.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1362,93,0
CP000253.1 1908545 . C T 1584.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1613,111,0
CP000253.1 1908607 . G A 1454.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5235;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1483,105,0
CP000253.1 1908819 . C T 402.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.14;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:30:431,30,0
CP000253.1 1908831 . G A 441.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:470,33,0
CP000253.1 1908876 . A T 452.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:481,33,0
CP000253.1 1909457 . A G 2894.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:122:99:2923,202,0
CP000253.1 1909504 . T A 3515.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3544,244,0
CP000253.1 1909507 . T C 3514.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3543,247,0
CP000253.1 1909538 . T C 3746.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.069;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8583;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.56;ReadPosRankSum=0.927;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,158:159:99:3775,259,0
CP000253.1 1909732 . C T 1686.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1715,123,0
CP000253.1 1909825 . C A 2619.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2648,190,0
CP000253.1 1909948 . A G 3608.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9485;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=23.59;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3637,259,0
CP000253.1 1909963 . C A 3985.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8644;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=24.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4014,280,0
CP000253.1 1910501 . A C 945.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:66:974,66,0
CP000253.1 1910587 . G A 231.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:12:18:260,18,0
CP000253.1 1910683 . A C 178.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:207,15,0
CP000253.1 1910766 . G A 330.10 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.718;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.63;ReadPosRankSum=0.435;SOR=0.416 GT:AD:DP:GQ:PL 0/1:1,15:17:11:358,0,11
CP000253.1 1911036 . C T 735.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:764,54,0
CP000253.1 1911743 . C T 2462.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2491,172,0
CP000253.1 1911890 . A G 1771.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6182;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1800,126,0
CP000253.1 1911936 . C G 694.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:51:723,51,0
CP000253.1 1911937 . A T 498.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:39:527,39,0
CP000253.1 1911943 . A G 510.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:39:539,39,0
CP000253.1 1911961 . G A 546.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:42:575,42,0
CP000253.1 1911977 . C G 648.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:48:677,48,0
CP000253.1 1912030 . T G 642.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:671,48,0
CP000253.1 1912086 . T C 980.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:72:1009,72,0
CP000253.1 1912090 . T C 990.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:75:1019,75,0
CP000253.1 1912093 . T A 1027.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:75:1056,75,0
CP000253.1 1912651 . G A 813.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:60:842,60,0
CP000253.1 1912891 . G A 2349.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2378,169,0
CP000253.1 1912906 . A G 2829.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1092;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2858,202,0
CP000253.1 1913021 . G A 4034.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7564;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,157:157:99:4063,286,0
CP000253.1 1913163 . G A 4543.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,202:203:99:4572,316,0
CP000253.1 1913284 . A C 4102.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=1.017 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4131,292,0
CP000253.1 1913290 . T C 4040.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.895;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2183;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.20;ReadPosRankSum=-1.692;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,166:167:99:4069,289,0
CP000253.1 1913296 . T C 4149.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1563;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=1.035 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4178,292,0
CP000253.1 1913560 . G A 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 1913758 . T A 450.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:479,33,0
CP000253.1 1913827 . G A 378.56 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.415;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.92;ReadPosRankSum=-0.646;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,18:19:7:406,0,7
CP000253.1 1914564 . T G 1708.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5555;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:76:99:1737,120,0
CP000253.1 1914802 . A G 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 1914864 . A G 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 1914884 . T A 268.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:297,21,0
CP000253.1 1914915 . T C 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 1915051 . A G 1581.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1610,111,0
CP000253.1 1915068 . C T 1714.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1743,120,0
CP000253.1 1915118 . A G 1990.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2019,138,0
CP000253.1 1915471 . C T 3695.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3724,259,0
CP000253.1 1915531 . T C 4966.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5309;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.65;ReadPosRankSum=-1.601;SOR=0.287 GT:AD:DP:GQ:PL 1/1:1,209:210:99:4995,346,0
CP000253.1 1915746 . G A 5180.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9237;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5209,361,0
CP000253.1 1917328 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1917469 . C T 549.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:578,39,0
CP000253.1 1917667 . T C 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 1917735 . A T 177.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:206,15,0
CP000253.1 1917988 . A C 267.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:296,21,0
CP000253.1 1918041 . C A 456.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:485,33,0
CP000253.1 1918061 . A G 499.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.73;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:528,36,0
CP000253.1 1918066 . G A 539.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.59;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:568,39,0
CP000253.1 1918083 . T G 547.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.91;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:576,39,0
CP000253.1 1918184 . C A 410.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:439,30,0
CP000253.1 1918536 . A G 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 1918581 . T C 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 1918983 . A G 2450.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9032;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2479,172,0
CP000253.1 1919072 . G A 2140.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2169,151,0
CP000253.1 1919166 . G A 1513.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1542,108,0
CP000253.1 1919400 . A G 769.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:54:798,54,0
CP000253.1 1919481 . A G 1372.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:96:1401,96,0
CP000253.1 1919828 . T G 397.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:426,30,0
CP000253.1 1920378 . T C 402.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:431,30,0
CP000253.1 1920390 . C T 442.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:471,33,0
CP000253.1 1920471 . T C 353.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:382,27,0
CP000253.1 1920507 . T A 537.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.92;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:39:566,39,0
CP000253.1 1920669 . T A 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 1920720 . A G 295.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:324,24,0
CP000253.1 1920819 . A G 208.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:237,18,0
CP000253.1 1920864 . C A 232.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.40;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:261,18,0
CP000253.1 1920933 . T C 222.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:251,18,0
CP000253.1 1921081 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:6:90,6,0
CP000253.1 1922127 . A G 393.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.906;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.88;ReadPosRankSum=-0.387;SOR=0.761 GT:AD:DP:GQ:PL 1/1:1,17:18:30:422,30,0
CP000253.1 1922145 . G A 298.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:24:327,24,0
CP000253.1 1922167 . T C 190.90 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.35;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:15:219,15,0
CP000253.1 1922186 . A G 272.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:21:301,21,0
CP000253.1 1922454 . T C 2449.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.844;DP=101;Dels=0.00;ExcessHet=3.0103;FS=3.322;HaplotypeScore=5.1178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.26;ReadPosRankSum=-0.944;SOR=0.482 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2478,172,0
CP000253.1 1922457 . A G 2445.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2304;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2474,172,0
CP000253.1 1922460 . T C 2428.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2457,172,0
CP000253.1 1922493 . G A 3146.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9634;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3175,223,0
CP000253.1 1922730 . T C 2763.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,114:116:99:2792,196,0
CP000253.1 1922751 . G T 2249.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.999 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2278,160,0
CP000253.1 1922754 . T A 1892.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1921,132,0
CP000253.1 1922778 . G A 1349.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,52:53:96:1378,96,0
CP000253.1 1922848 . C A 321.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.45;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:350,24,0
CP000253.1 1922931 . G A 233.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:262,18,0
CP000253.1 1922946 . C T 448.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:477,33,0
CP000253.1 1923094 . C T 447.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:476,33,0
CP000253.1 1923407 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 1923811 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1923815 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1939944 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1939953 . C G 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1940035 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1940050 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 1940131 . C A 116.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:144,12,0
CP000253.1 1940218 . C T 125.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:153,12,0
CP000253.1 1940227 . T G 85.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0
CP000253.1 1940230 . T A 85.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0
CP000253.1 1940232 . C A 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 1940233 . T G 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 1940236 . C G 83.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:111,9,0
CP000253.1 1940248 . G C 81.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:109,9,0
CP000253.1 1940272 . A G 90.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0
CP000253.1 1940289 . T C 87.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0
CP000253.1 1940317 . T G 85.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0
CP000253.1 1940344 . G A 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 1951326 . T C 188.90 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=30.34;MQ0=8;QD=10.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:15:217,15,0
CP000253.1 1951374 . A C 430.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=32.19;MQ0=18;MQRankSum=1.385;QD=10.77;ReadPosRankSum=0.754;SOR=0.365 GT:AD:DP:GQ:PL 1/1:1,39:40:33:459,33,0
CP000253.1 1951507 . T C 415.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=31.62;MQ0=19;QD=12.23;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,34:35:33:444,33,0
CP000253.1 1951800 . C T 188.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:217,15,0
CP000253.1 1952042 . A G 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 1952112 . T G 2184.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6091;MLEAC=2;MLEAF=1.00;MQ=55.59;MQ0=0;QD=24.55;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2213,157,0
CP000253.1 1952131 . T A 2237.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1100;MLEAC=2;MLEAF=1.00;MQ=56.78;MQ0=0;QD=25.72;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,87:90:99:2266,163,0
CP000253.1 1952132 . T C 2313.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.930;DP=93;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1100;MLEAC=2;MLEAF=1.00;MQ=56.85;MQ0=0;MQRankSum=-0.445;QD=25.15;ReadPosRankSum=1.664;SOR=0.545 GT:AD:DP:GQ:PL 1/1:1,91:92:99:2342,166,0
CP000253.1 1952321 . A G 3598.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4172;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=26.08;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,138:140:99:3627,262,0
CP000253.1 1952336 . G A 3713.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6120;MLEAC=2;MLEAF=1.00;MQ=59.27;MQ0=2;QD=24.92;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,149:151:99:3742,268,0
CP000253.1 1952339 . G A 3898.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5061;MLEAC=2;MLEAF=1.00;MQ=59.30;MQ0=2;QD=24.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,156:157:99:3927,280,0
CP000253.1 1952381 . C T 3926.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4667;MLEAC=2;MLEAF=1.00;MQ=58.23;MQ0=4;QD=23.80;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,165:166:99:3955,280,0
CP000253.1 1952426 . G A 3571.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.768;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3973;MLEAC=2;MLEAF=1.00;MQ=58.41;MQ0=2;MQRankSum=-0.274;QD=24.13;ReadPosRankSum=-1.697;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,147:148:99:3600,256,0
CP000253.1 1952435 . T A 3250.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.955;DP=143;Dels=0.00;ExcessHet=3.0103;FS=3.044;HaplotypeScore=8.6293;MLEAC=2;MLEAF=1.00;MQ=58.36;MQ0=2;MQRankSum=1.638;QD=22.73;ReadPosRankSum=0.036;SOR=0.064 GT:AD:DP:GQ:PL 1/1:3,140:143:99:3279,198,0
CP000253.1 1952441 . T C 3313.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4734;MLEAC=2;MLEAF=1.00;MQ=58.32;MQ0=2;QD=23.67;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3342,235,0
CP000253.1 1952570 . C T 2033.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.513;DP=86;Dels=0.00;ExcessHet=3.0103;FS=3.757;HaplotypeScore=17.1104;MLEAC=2;MLEAF=1.00;MQ=57.24;MQ0=2;MQRankSum=-0.562;QD=24.21;ReadPosRankSum=-1.233;SOR=0.464 GT:AD:DP:GQ:PL 1/1:2,82:86:99:2062,149,0
CP000253.1 1952571 . C T 2026.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9771;MLEAC=2;MLEAF=1.00;MQ=57.11;MQ0=2;QD=24.72;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2055,147,0
CP000253.1 1952939 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=38.08;MQ0=2;QD=3.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,5:5:3:45,3,0
CP000253.1 1952957 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=42.52;MQ0=2;QD=8.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:6:81,6,0
CP000253.1 1952961 . T C 53.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=42.52;MQ0=2;QD=8.96;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:6:81,6,0
CP000253.1 1952963 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=42.52;MQ0=2;QD=9.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:6:85,6,0
CP000253.1 1952967 . C T 55.74 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=39.39;MQ0=2;QD=7.96;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,7:7:6:83,6,0
CP000253.1 1952996 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953014 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953035 . G T 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953038 . C A 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953041 . T G 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953050 . A T 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953071 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953076 . C A 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953077 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953109 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953115 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953125 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953127 . A C 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953157 . C G 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953159 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.87;MQ0=2;QD=6.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,9:9:6:90,6,0
CP000253.1 1953190 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.17;MQ0=1;QD=7.84;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,8:8:6:90,6,0
CP000253.1 1953196 . C T 53.74 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=39.39;MQ0=0;QD=10.75;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:6:6:81,6,0
CP000253.1 1953208 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.61;MQ0=0;QD=3.67;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:3:41,3,0
CP000253.1 1953226 . G A 11.83 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=26.20;MQ0=0;QD=3.94;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:3:38,3,0
CP000253.1 1960017 . A C 1552.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=1.092 GT:AD:DP:GQ:PL 1/1:0,63:64:99:1581,111,0
CP000253.1 1960563 . T C 687.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=28.66;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:51:716,51,0
CP000253.1 1960568 . G A 631.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=26.32;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:48:660,48,0
CP000253.1 1961866 . G A 3473.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.951;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0440;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=0.000;QD=26.32;ReadPosRankSum=-0.607;SOR=0.315 GT:AD:DP:GQ:PL 1/1:1,131:133:99:3502,250,0
CP000253.1 1961869 . A G 3487.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7262;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.22;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3516,247,0
CP000253.1 1961875 . A G 3429.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8374;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=25.79;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3458,244,0
CP000253.1 1961878 . C T 3586.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9592;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=26.37;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3615,256,0
CP000253.1 1961886 . T C 3805.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1474;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.37;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,150:151:99:3834,274,0
CP000253.1 1961899 . A T 3856.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3885,274,0
CP000253.1 1961964 . G A 3735.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5540;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,154:156:99:3764,271,0
CP000253.1 1961983 . T C 3553.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3582,256,0
CP000253.1 1961989 . T C 3531.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3560,253,0
CP000253.1 1962004 . T A 3335.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.794;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4968;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.71;ReadPosRankSum=0.873;SOR=0.289 GT:AD:DP:GQ:PL 1/1:1,134:136:99:3364,238,0
CP000253.1 1962007 . A C 3530.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2301;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3559,253,0
CP000253.1 1962034 . G A 3657.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9676;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.55;ReadPosRankSum=0.000;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,148:149:99:3686,262,0
CP000253.1 1962052 . T C 3651.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,153:155:99:3680,259,0
CP000253.1 1962067 . A T 3908.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,160:161:99:3937,277,0
CP000253.1 1962073 . A G 3870.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6232;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,162:164:99:3899,277,0
CP000253.1 1962091 . C T 3991.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3728;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4020,283,0
CP000253.1 1962097 . A G 3948.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,162:162:99:3977,280,0
CP000253.1 1962114 . G C 4113.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3799;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=1;QD=24.63;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4142,292,0
CP000253.1 1962211 . T G 3572.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.9627;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3601,256,0
CP000253.1 1962270 . T G 3437.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.376;DP=141;Dels=0.00;ExcessHet=3.0103;FS=3.278;HaplotypeScore=16.9642;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.38;ReadPosRankSum=-0.750;SOR=0.551 GT:AD:DP:GQ:PL 1/1:1,140:141:99:3466,253,0
CP000253.1 1962283 . A G 3550.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,141:143:99:3579,253,0
CP000253.1 1962313 . A G 3454.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0051;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.40;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,136:137:99:3483,250,0
CP000253.1 1962316 . G A 3480.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0078;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.22;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3509,247,0
CP000253.1 1962324 . G A 3484.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1699;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=24.54;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3513,250,0
CP000253.1 1962334 . T G 3443.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.737;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0138;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=0.369;SOR=0.455 GT:AD:DP:GQ:PL 1/1:1,140:142:99:3472,247,0
CP000253.1 1962397 . T C 2332.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1668;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2361,169,0
CP000253.1 1962424 . A G 2255.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.732;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.93;ReadPosRankSum=-1.654;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,86:89:99:2284,166,0
CP000253.1 1962438 . A C 2116.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.739;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=0.469;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,84:85:99:2145,156,0
CP000253.1 1962439 . T C 2181.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:85:99:2210,160,0
CP000253.1 1962502 . T C 1683.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.73;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1712,123,0
CP000253.1 1964708 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 1965837 . G C 285.85 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.158;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6069;MLEAC=1;MLEAF=0.500;MQ=52.32;MQ0=0;MQRankSum=4.252;QD=15.88;ReadPosRankSum=3.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,16:18:17:314,0,17
CP000253.1 1967012 . C T 92.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:5:9:120,9,0
CP000253.1 1967022 . G T 2271.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2300,160,0
CP000253.1 1967213 . T A 2817.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9500;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2846,199,0
CP000253.1 1967387 . C T 3988.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5030;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,152:153:99:4017,286,0
CP000253.1 1967813 . A C 1799.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.27;SOR=1.574 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1828,132,0
CP000253.1 1968023 . G A 271.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:13:21:300,21,0
CP000253.1 1968224 . A T 309.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:338,24,0
CP000253.1 1968236 . G T 309.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:338,24,0
CP000253.1 1968268 . G A 309.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:14:24:338,24,0
CP000253.1 1968271 . G T 306.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:335,24,0
CP000253.1 1969110 . A G 1887.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.810;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8224;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.74;ReadPosRankSum=0.627;SOR=0.264 GT:AD:DP:GQ:PL 1/1:1,82:84:98:1916,98,0
CP000253.1 1969284 . T C 1475.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1504,105,0
CP000253.1 1969317 . A G 1381.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2054;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,56:57:99:1410,99,0
CP000253.1 1969354 . C T 925.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:954,66,0
CP000253.1 1969374 . C T 1076.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:46:78:1105,78,0
CP000253.1 1969413 . T C 1196.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1225,87,0
CP000253.1 1969416 . G T 1156.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2623;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1185,81,0
CP000253.1 1969526 . T C 4039.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9749;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4068,283,0
CP000253.1 1969719 . G A 5544.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,227:227:99:5573,391,0
CP000253.1 1969773 . C T 4846.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,185:186:99:4875,349,0
CP000253.1 1970261 . T G 1110.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1139,81,0
CP000253.1 1970751 . A G 1710.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.22;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1739,120,0
CP000253.1 1971446 . G A 97.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:125,9,0
CP000253.1 1971901 . A G 835.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:60:864,60,0
CP000253.1 1972195 . A T 3008.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0804;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3037,208,0
CP000253.1 1972558 . G A 474.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:503,36,0
CP000253.1 1972888 . A G 2675.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=115.1506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2704,187,0
CP000253.1 1972958 . T C 3029.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0146;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3058,211,0
CP000253.1 1972995 . A G 3658.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.937;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5224;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.39;ReadPosRankSum=0.971;SOR=0.374 GT:AD:DP:GQ:PL 1/1:1,149:154:99:3687,259,0
CP000253.1 1973415 . A T 2147.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7114;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2176,151,0
CP000253.1 1974064 . A C 2261.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6301;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2290,160,0
CP000253.1 1974115 . T A 1804.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1833,129,0
CP000253.1 1974169 . T A 1486.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1515,108,0
CP000253.1 1974421 . A T 514.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:39:543,39,0
CP000253.1 1974481 . A G 142.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:15:171,15,0
CP000253.1 1974556 . C T 286.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:315,24,0
CP000253.1 1974918 . T G 958.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:69:987,69,0
CP000253.1 1975035 . C T 668.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:48:697,48,0
CP000253.1 1975038 . G A 634.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:45:663,45,0
CP000253.1 1975064 . A G 443.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:33:472,33,0
CP000253.1 1975149 . C T 401.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:30:430,30,0
CP000253.1 1975814 . G A 596.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:625,45,0
CP000253.1 1975955 . C T 3547.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3576,250,0
CP000253.1 1976949 . G C 1161.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8934;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:49:84:1190,84,0
CP000253.1 1976955 . C T 1220.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1249,87,0
CP000253.1 1976976 . T A 1215.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.81;ReadPosRankSum=-0.921;SOR=0.487 GT:AD:DP:GQ:PL 1/1:1,48:49:87:1244,87,0
CP000253.1 1976979 . T A 1177.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1206,84,0
CP000253.1 1976983 . A T 1218.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:87:1247,87,0
CP000253.1 1976992 . A G 1224.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1253,87,0
CP000253.1 1977123 . T A 701.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:730,51,0
CP000253.1 1977828 . T C 376.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:30:405,30,0
CP000253.1 1978069 . T A 607.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:45:636,45,0
CP000253.1 1978268 . A G 2172.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.057;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9801;MLEAC=2;MLEAF=1.00;MQ=59.66;MQ0=0;MQRankSum=9.696;QD=23.11;ReadPosRankSum=2.426;SOR=0.982 GT:AD:DP:GQ:PL 1/1:2,92:97:99:2201,115,0
CP000253.1 1978302 . T A 2298.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6978;MLEAC=2;MLEAF=1.00;MQ=57.74;MQ0=1;QD=22.32;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,103:106:99:2327,163,0
CP000253.1 1978342 . G A 2014.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.225;DP=131;Dels=0.00;ExcessHet=3.0103;FS=2.735;HaplotypeScore=24.6065;MLEAC=1;MLEAF=0.500;MQ=57.55;MQ0=1;MQRankSum=6.608;QD=15.38;ReadPosRankSum=5.012;SOR=0.574 GT:AD:DP:GQ:PL 0/1:31,100:131:99:2043,0,430
CP000253.1 1978346 . A C 334.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.949;DP=127;Dels=0.00;ExcessHet=3.0103;FS=3.169;HaplotypeScore=26.0492;MLEAC=1;MLEAF=0.500;MQ=57.47;MQ0=1;MQRankSum=-1.369;QD=2.64;ReadPosRankSum=-5.386;SOR=1.037 GT:AD:DP:GQ:PL 0/1:105,22:127:99:363,0,2095
CP000253.1 1978369 . A T 310.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.722;DP=140;Dels=0.00;ExcessHet=3.0103;FS=3.065;HaplotypeScore=32.5882;MLEAC=1;MLEAF=0.500;MQ=57.71;MQ0=1;MQRankSum=-1.593;QD=2.22;ReadPosRankSum=-2.733;SOR=1.063 GT:AD:DP:GQ:PL 0/1:118,22:140:99:339,0,2270
CP000253.1 1978393 . T G 349.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.878;DP=134;Dels=0.00;ExcessHet=3.0103;FS=7.168;HaplotypeScore=20.8445;MLEAC=1;MLEAF=0.500;MQ=58.07;MQ0=0;MQRankSum=-7.015;QD=2.61;ReadPosRankSum=0.020;SOR=1.445 GT:AD:DP:GQ:PL 0/1:108,26:134:99:378,0,2149
CP000253.1 1978625 . C T 256.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.10;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:21:285,21,0
CP000253.1 1978626 . A G 257.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.23;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:21:286,21,0
CP000253.1 1978648 . G A 250.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.35;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:21:279,21,0
CP000253.1 1978696 . C T 175.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:204,15,0
CP000253.1 1978854 . C T 547.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5628;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.91;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:576,39,0
CP000253.1 1978892 . G A 676.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:705,48,0
CP000253.1 1979031 . T C 494.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:523,36,0
CP000253.1 1979036 . T A 442.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:22:33:471,33,0
CP000253.1 1979048 . A G 530.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:559,39,0
CP000253.1 1979226 . A T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 1979377 . A C 823.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:60:852,60,0
CP000253.1 1979446 . A G 728.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6130;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:54:757,54,0
CP000253.1 1979710 . C T 2955.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,130:130:99:2984,205,0
CP000253.1 1979737 . C T 2982.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8030;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3011,205,0
CP000253.1 1981053 . A G 2636.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7726;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2665,190,0
CP000253.1 1981213 . T C 1498.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1527,105,0
CP000253.1 1981520 . C T 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 1982670 . A G 3598.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1241;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,159:160:99:3627,247,0
CP000253.1 1983217 . A T 230.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:259,18,0
CP000253.1 1983714 . T A 4056.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3232;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4085,289,0
CP000253.1 1984430 . C T 225.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:254,18,0
CP000253.1 1984638 . G A 270.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.838;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.83;ReadPosRankSum=1.767;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,12:13:21:299,21,0
CP000253.1 1985488 . C A 3853.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.287;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.64;ReadPosRankSum=0.023;SOR=0.924 GT:AD:DP:GQ:PL 1/1:2,161:163:99:3882,232,0
CP000253.1 1985526 . A T 3201.82 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.033 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3230,229,0
CP000253.1 1986437 . G A 961.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2259;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:42:69:990,69,0
CP000253.1 1987683 . A T 1679.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.270;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=77.3770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.66;ReadPosRankSum=1.367;SOR=0.499 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1708,117,0
CP000253.1 1987741 . T A 2132.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.987;DP=95;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.7368;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.93;ReadPosRankSum=1.416;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,92:94:99:2161,147,0
CP000253.1 1987789 . A G 2118.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2147,150,0
CP000253.1 1987863 . A T 2308.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5587;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2337,163,0
CP000253.1 1988213 . T A 139.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.81;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:167,12,0
CP000253.1 1988833 . T C 4605.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.063 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4634,328,0
CP000253.1 1988839 . T C 4585.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=1.063 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4614,328,0
CP000253.1 1989142 . T C 3962.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.676;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.40;ReadPosRankSum=-0.444;SOR=0.312 GT:AD:DP:GQ:PL 1/1:1,155:157:99:3991,249,0
CP000253.1 1989223 . C T 2307.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3086;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.15;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2336,166,0
CP000253.1 1990090 . A G 1325.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.06;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:50:99:1354,99,0
CP000253.1 1990753 . C T 2718.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.916;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9263;MLEAC=2;MLEAF=1.00;MQ=59.81;MQ0=0;MQRankSum=0.000;QD=25.17;ReadPosRankSum=1.075;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,107:110:99:2747,199,0
CP000253.1 1990861 . T C 3175.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8698;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3204,226,0
CP000253.1 1990864 . A T 3288.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8895;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3317,232,0
CP000253.1 1991288 . T C 2313.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2342,160,0
CP000253.1 1991748 . T C 81.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:109,9,0
CP000253.1 1992359 . C T 961.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:69:990,69,0
CP000253.1 1993240 . A G 1648.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1677,120,0
CP000253.1 1994084 . A G 679.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8857;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:708,48,0
CP000253.1 1994243 . C T 1870.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1899,129,0
CP000253.1 1994319 . T C 1709.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1738,120,0
CP000253.1 1994568 . T A 2329.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2358,166,0
CP000253.1 1995282 . G A 1331.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:96:1360,96,0
CP000253.1 1995420 . C T 3115.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3144,220,0
CP000253.1 1996503 . A T 4296.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,178:180:99:4325,304,0
CP000253.1 1996891 . A G 3034.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,117:121:99:3063,223,0
CP000253.1 1997028 . G A 3056.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.928;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9446;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.26;ReadPosRankSum=1.475;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,120:121:99:3085,217,0
CP000253.1 1997040 . T C 3163.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8687;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3192,226,0
CP000253.1 1997148 . A G 3878.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.12;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3907,283,0
CP000253.1 1997217 . A G 3406.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0301;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,132:134:99:3435,244,0
CP000253.1 1997420 . A G 2869.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2898,205,0
CP000253.1 1997448 . A G 2599.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2632;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,108:111:99:2628,187,0
CP000253.1 1997847 . C T 2956.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9021;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2985,208,0
CP000253.1 1997940 . C T 4317.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6779;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4346,298,0
CP000253.1 1998102 . A G 3528.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3557,244,0
CP000253.1 1998225 . G A 966.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=1.209 GT:AD:DP:GQ:PL 1/1:0,36:36:72:995,72,0
CP000253.1 1998369 . T C 1406.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1435,102,0
CP000253.1 1998603 . A T 1872.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,77:78:99:1901,132,0
CP000253.1 1999268 . C T 2534.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2910;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2563,178,0
CP000253.1 1999329 . A G 3025.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3054,211,0
CP000253.1 1999397 . G A 2923.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:130:99:2952,202,0
CP000253.1 1999438 . C T 2971.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3000,208,0
CP000253.1 1999676 . A T 216.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:245,18,0
CP000253.1 1999844 . C T 1758.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7915;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:79:99:1787,123,0
CP000253.1 2000255 . C T 1066.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7396;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1095,75,0
CP000253.1 2000315 . C A 1225.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1254,87,0
CP000253.1 2000735 . C T 4650.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.949;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3307;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=0.767;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,191:192:99:4679,325,0
CP000253.1 2000759 . T A 4437.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.502;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.8480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.61;ReadPosRankSum=0.059;SOR=0.144 GT:AD:DP:GQ:PL 1/1:2,186:189:99:4466,313,0
CP000253.1 2000786 . T C 4392.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4755;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,182:183:99:4421,316,0
CP000253.1 2001736 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2001795 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=5.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:38,3,0
CP000253.1 2002047 . C T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2003072 . A C 1098.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1127,78,0
CP000253.1 2005631 . G A 5356.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.755;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.6561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.70;ReadPosRankSum=-1.257;SOR=0.339 GT:AD:DP:GQ:PL 1/1:1,225:226:99:5385,376,0
CP000253.1 2005721 . C G 4035.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.7170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,165:167:99:4064,286,0
CP000253.1 2005847 . C T 1274.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.12;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:47:93:1303,93,0
CP000253.1 2006106 . C A 1322.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1351,93,0
CP000253.1 2006146 . A T 1088.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1117,78,0
CP000253.1 2006448 . A C 3258.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.86;ReadPosRankSum=0.221;SOR=0.517 GT:AD:DP:GQ:PL 1/1:1,125:126:99:3287,235,0
CP000253.1 2006682 . T C 5693.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,240:241:99:5722,400,0
CP000253.1 2006832 . G A 3976.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.106 GT:AD:DP:GQ:PL 1/1:0,153:153:99:4005,283,0
CP000253.1 2006856 . A G 3292.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0192;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,126:129:99:3321,238,0
CP000253.1 2006895 . C A 2723.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2752,196,0
CP000253.1 2006898 . C T 2414.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.680;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5549;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.15;ReadPosRankSum=-1.337;SOR=0.411 GT:AD:DP:GQ:PL 1/1:1,95:96:99:2443,154,0
CP000253.1 2007033 . G A 1725.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1754,123,0
CP000253.1 2007053 . A G 737.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:54:766,54,0
CP000253.1 2007174 . G A 409.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:438,30,0
CP000253.1 2007180 . G T 366.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.58;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:27:395,27,0
CP000253.1 2009338 . T C 1584.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1613,114,0
CP000253.1 2009666 . G A 1020.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:47:72:1049,72,0
CP000253.1 2009678 . C T 1154.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1183,81,0
CP000253.1 2009869 . A T 1353.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,54:54:96:1382,96,0
CP000253.1 2010370 . A G 2205.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:91:99:2234,157,0
CP000253.1 2010871 . C T 3684.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.703;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=0.440;SOR=0.807 GT:AD:DP:GQ:PL 1/1:2,146:149:99:3713,223,0
CP000253.1 2010883 . T A 3889.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.443;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9422;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.46;ReadPosRankSum=-0.023;SOR=0.785 GT:AD:DP:GQ:PL 1/1:2,157:159:99:3918,235,0
CP000253.1 2010889 . C A 3775.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.645;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1560;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.68;ReadPosRankSum=-0.016;SOR=0.761 GT:AD:DP:GQ:PL 1/1:2,151:155:99:3804,233,0
CP000253.1 2011006 . A G 3797.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3826,271,0
CP000253.1 2011105 . A G 3095.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9127;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3124,217,0
CP000253.1 2011111 . G T 3103.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3132,220,0
CP000253.1 2011147 . T C 2708.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3868;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2737,190,0
CP000253.1 2011515 . C T 357.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:386,27,0
CP000253.1 2011801 . G A 449.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:478,33,0
CP000253.1 2011924 . T A 1438.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.15;SOR=1.287 GT:AD:DP:GQ:PL 1/1:0,53:54:99:1467,105,0
CP000253.1 2012016 . T C 2811.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2117;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2840,196,0
CP000253.1 2012360 . C T 4764.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9350;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,209:210:99:4793,328,0
CP000253.1 2012673 . A G 264.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:293,21,0
CP000253.1 2013017 . C T 305.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:334,24,0
CP000253.1 2013664 . C A 3220.76 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.880;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.36;ReadPosRankSum=-0.642;SOR=0.699 GT:AD:DP:GQ:PL 1/1:1,126:128:99:3249,229,0
CP000253.1 2013765 . A G 4200.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.770;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.28;ReadPosRankSum=-1.682;SOR=0.362 GT:AD:DP:GQ:PL 1/1:1,172:174:99:4229,260,0
CP000253.1 2013897 . T C 4448.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.641;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=1.408;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,186:187:99:4477,287,0
CP000253.1 2014062 . T C 4594.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,194:194:99:4623,325,0
CP000253.1 2014398 . T C 1078.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1107,78,0
CP000253.1 2014452 . C T 886.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:63:915,63,0
CP000253.1 2014526 . T C 314.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:343,24,0
CP000253.1 2014641 . T C 181.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:210,15,0
CP000253.1 2014655 . C T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2014691 . C T 137.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.41;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:165,12,0
CP000253.1 2014870 . T A 306.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:24:335,24,0
CP000253.1 2014886 . G A 241.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:270,21,0
CP000253.1 2015009 . G T 253.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:282,21,0
CP000253.1 2015143 . T A 1082.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1111,78,0
CP000253.1 2015288 . G A 2836.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7078;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2865,205,0
CP000253.1 2015327 . G A 3347.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=1.347 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3376,241,0
CP000253.1 2015354 . G A 3599.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.000;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.66;ReadPosRankSum=0.244;SOR=1.108 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3628,259,0
CP000253.1 2015357 . T A 3598.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.094;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.27;ReadPosRankSum=-2.020;SOR=1.301 GT:AD:DP:GQ:PL 1/1:2,135:137:99:3627,220,0
CP000253.1 2015381 . G A 3907.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.795;DP=151;Dels=0.00;ExcessHet=3.0103;FS=3.936;HaplotypeScore=20.8837;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.88;ReadPosRankSum=-0.402;SOR=0.906 GT:AD:DP:GQ:PL 1/1:1,150:151:99:3936,258,0
CP000253.1 2015561 . C T 5553.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.724;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.7187;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.68;ReadPosRankSum=1.155;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,224:228:99:5582,400,0
CP000253.1 2016072 . C T 3089.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3118,217,0
CP000253.1 2016149 . T C 1966.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.70;ReadPosRankSum=-0.021;SOR=0.623 GT:AD:DP:GQ:PL 1/1:1,82:84:99:1995,138,0
CP000253.1 2016388 . G T 90.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:118,9,0
CP000253.1 2016464 . G A 1441.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1470,102,0
CP000253.1 2016476 . C A 2150.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2179,151,0
CP000253.1 2016498 . T C 2479.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2508,175,0
CP000253.1 2016506 . G A 2578.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2607,181,0
CP000253.1 2016710 . T C 2771.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8692;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2800,193,0
CP000253.1 2017262 . T C 2581.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2610,181,0
CP000253.1 2017310 . A G 1974.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=1.058 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2003,138,0
CP000253.1 2017353 . G A 1280.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,51:51:93:1309,93,0
CP000253.1 2017473 . T C 359.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:388,27,0
CP000253.1 2017535 . A C 359.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:388,27,0
CP000253.1 2017545 . A G 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 2017674 . T C 636.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.96;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:665,45,0
CP000253.1 2018329 . G T 275.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.22;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:304,21,0
CP000253.1 2018959 . C T 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 2019101 . A T 238.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.53;MQ0=0;QD=21.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:267,21,0
CP000253.1 2019135 . C T 214.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:243,18,0
CP000253.1 2019334 . C T 1577.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3478;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.17;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,56:57:99:1606,117,0
CP000253.1 2019344 . C T 1929.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9387;MLEAC=2;MLEAF=1.00;MQ=59.66;MQ0=0;QD=28.80;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,67:69:99:1958,141,0
CP000253.1 2019497 . A T 4091.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0659;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4120,289,0
CP000253.1 2019695 . T A 5428.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5223;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.858 GT:AD:DP:GQ:PL 1/1:0,221:221:99:5457,385,0
CP000253.1 2019713 . C T 5160.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0229;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,210:210:99:5189,361,0
CP000253.1 2019890 . C A 4512.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4541,316,0
CP000253.1 2021413 . C T 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 2021843 . C T 142.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:170,12,0
CP000253.1 2022406 . T C 147.90 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:176,15,0
CP000253.1 2024144 . T A 757.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:33:54:786,54,0
CP000253.1 2024637 . C T 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 2024919 . T C 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2025320 . A G 221.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:250,18,0
CP000253.1 2025655 . A G 1114.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:78:1143,78,0
CP000253.1 2025657 . A T 1118.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:78:1147,78,0
CP000253.1 2025858 . G A 700.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4095;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:729,51,0
CP000253.1 2026107 . T A 1209.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:54:84:1238,84,0
CP000253.1 2026370 . C T 533.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:27:39:562,39,0
CP000253.1 2026373 . C A 575.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:604,42,0
CP000253.1 2027638 . G A 819.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5098;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:60:848,60,0
CP000253.1 2029555 . T A 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=3.71;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:32:39,0,32
CP000253.1 2029781 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2029817 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2029859 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2030327 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2030524 . A G 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 2030624 . T G 188.90 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.09;MQ0=1;QD=17.17;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,11:11:15:217,15,0
CP000253.1 2030642 . A G 242.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.383;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.16;MQ0=1;MQRankSum=-0.740;QD=10.56;ReadPosRankSum=-4.015;SOR=0.646 GT:AD:DP:GQ:PL 0/1:9,14:23:99:271,0,182
CP000253.1 2030667 . T C 207.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.091;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=58.16;MQ0=1;MQRankSum=-0.740;QD=9.03;ReadPosRankSum=-2.993;SOR=0.646 GT:AD:DP:GQ:PL 0/1:9,14:23:99:236,0,187
CP000253.1 2030669 . C T 246.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.519;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=58.08;MQ0=1;MQRankSum=-0.686;QD=11.22;ReadPosRankSum=-3.817;SOR=0.836 GT:AD:DP:GQ:PL 0/1:8,14:22:99:275,0,146
CP000253.1 2030672 . C T 244.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.304;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=1;MLEAF=0.500;MQ=58.08;MQ0=1;MQRankSum=-0.686;QD=11.66;ReadPosRankSum=-3.656;SOR=0.836 GT:AD:DP:GQ:PL 0/1:8,13:22:99:273,0,146
CP000253.1 2030689 . T G 241.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.029;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=58.16;MQ0=1;MQRankSum=-0.740;QD=10.51;ReadPosRankSum=0.070;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,14:23:99:270,0,179
CP000253.1 2030693 . T C 244.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.457;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=1;MLEAF=0.500;MQ=58.31;MQ0=1;MQRankSum=-0.836;QD=9.79;ReadPosRankSum=0.819;SOR=0.713 GT:AD:DP:GQ:PL 0/1:11,14:25:99:273,0,188
CP000253.1 2030701 . T C 201.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.051;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=1;MLEAF=0.500;MQ=58.44;MQ0=1;MQRankSum=-0.923;QD=7.47;ReadPosRankSum=1.490;SOR=0.728 GT:AD:DP:GQ:PL 0/1:13,14:27:99:230,0,254
CP000253.1 2030711 . C T 33.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.152;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=1.99;ReadPosRankSum=1.194;SOR=0.569 GT:AD:DP:GQ:PL 0/1:13,4:17:62:62,0,275
CP000253.1 2030714 . T A 368.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:397,27,0
CP000253.1 2030716 . A G 364.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.46;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:393,27,0
CP000253.1 2030732 . G A 356.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:385,27,0
CP000253.1 2030772 . T C 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2030804 . C T 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 2030818 . A G 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2030831 . A G 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2030843 . A G 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2030852 . A T 405.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:434,30,0
CP000253.1 2030861 . G A 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2030867 . A C 396.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:425,30,0
CP000253.1 2030873 . G A 397.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:426,30,0
CP000253.1 2030874 . T A 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2030875 . A C 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 2030886 . T G 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 2030902 . C T 405.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:434,30,0
CP000253.1 2030904 . A G 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2030905 . C G 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2030929 . T C 1012.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.63;MQ0=0;QD=22.51;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1041,72,0
CP000253.1 2030931 . T C 1012.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=59.63;MQ0=0;QD=22.51;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1041,72,0
CP000253.1 2030933 . A G 1018.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=59.63;MQ0=0;QD=22.64;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1047,72,0
CP000253.1 2030945 . T G 1028.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=59.63;MQ0=0;QD=22.86;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1057,72,0
CP000253.1 2030957 . A G 971.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;QD=22.60;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1000,69,0
CP000253.1 2030963 . A G 981.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;QD=22.83;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1010,69,0
CP000253.1 2030975 . A G 971.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;QD=22.60;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1000,69,0
CP000253.1 2030983 . C A 856.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.41;MQ0=0;QD=22.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:60:885,60,0
CP000253.1 2031000 . T C 856.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=59.41;MQ0=0;QD=22.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:60:885,60,0
CP000253.1 2031002 . C T 813.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=59.41;MQ0=0;QD=21.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:57:842,57,0
CP000253.1 2031020 . G A 807.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=59.37;MQ0=0;QD=22.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:57:836,57,0
CP000253.1 2031022 . A G 720.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.34;MQ0=0;QD=21.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:51:749,51,0
CP000253.1 2031026 . A C 707.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=59.29;MQ0=0;QD=22.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:51:736,51,0
CP000253.1 2031034 . T C 631.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.109;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=59.29;MQ0=0;MQRankSum=-0.218;QD=20.38;ReadPosRankSum=1.737;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,30:32:45:660,45,0
CP000253.1 2031044 . C T 638.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=59.54;MQ0=0;QD=22.03;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:667,45,0
CP000253.1 2031047 . T A 598.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.54;MQ0=0;QD=20.65;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:42:627,42,0
CP000253.1 2031059 . T G 549.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.804;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.50;MQ0=0;MQRankSum=-0.235;QD=20.36;ReadPosRankSum=1.159;SOR=0.458 GT:AD:DP:GQ:PL 1/1:1,26:27:39:578,39,0
CP000253.1 2031077 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.52;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2031079 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.52;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2031080 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.52;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 2031081 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.52;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2031083 . T G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.52;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2031085 . T A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.52;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2031102 . C T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.02;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2031106 . C T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.02;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2031112 . A T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.26;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2031164 . A G 452.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.72;MQ0=0;QD=21.56;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:481,33,0
CP000253.1 2031188 . G A 594.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.78;MQ0=0;QD=22.03;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:623,42,0
CP000253.1 2031193 . C T 539.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.59;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:568,39,0
CP000253.1 2031202 . C T 589.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:618,42,0
CP000253.1 2031203 . A C 594.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:623,42,0
CP000253.1 2031208 . C T 590.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:27:42:619,42,0
CP000253.1 2031209 . T G 594.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:623,42,0
CP000253.1 2031217 . A G 675.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.80;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:704,48,0
CP000253.1 2031230 . C T 728.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:51:757,51,0
CP000253.1 2031232 . A T 728.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:51:757,51,0
CP000253.1 2031269 . C T 858.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:887,60,0
CP000253.1 2031275 . A G 855.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:884,60,0
CP000253.1 2031279 . T G 858.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:887,60,0
CP000253.1 2031293 . A T 813.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:57:842,57,0
CP000253.1 2031307 . A T 849.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:60:878,60,0
CP000253.1 2031311 . A G 837.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:60:866,60,0
CP000253.1 2031323 . A T 728.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:51:757,51,0
CP000253.1 2031372 . G A 410.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.62;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:439,30,0
CP000253.1 2031383 . A G 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 2031384 . T A 403.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:432,30,0
CP000253.1 2031394 . A T 403.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:432,30,0
CP000253.1 2031506 . T C 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2031535 . G A 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 2031552 . C T 173.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:7:15:202,15,0
CP000253.1 2031576 . C T 139.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.81;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:167,12,0
CP000253.1 2031577 . A C 138.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:166,12,0
CP000253.1 2031594 . T G 137.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:165,12,0
CP000253.1 2031599 . G T 137.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:165,12,0
CP000253.1 2031746 . G A 438.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.89;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:467,33,0
CP000253.1 2032003 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2032010 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2032288 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2032381 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2032470 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2032604 . G A 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 2032874 . T C 106.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.18;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:9:134,9,0
CP000253.1 2033096 . G T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 2033098 . A T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 2033099 . A T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 2033101 . A C 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 2033225 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2033707 . T A 274.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.14;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:303,21,0
CP000253.1 2033764 . A G 234.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.35;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:263,18,0
CP000253.1 2034281 . T A 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 2034340 . A G 141.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:169,12,0
CP000253.1 2035494 . T C 1018.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4420;MLEAC=2;MLEAF=1.00;MQ=59.46;MQ0=0;QD=23.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1047,75,0
CP000253.1 2036266 . C T 293.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:322,24,0
CP000253.1 2036269 . A G 282.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:311,24,0
CP000253.1 2037840 . T C 1591.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4116;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1620,114,0
CP000253.1 2039439 . A G 6024.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3286;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,233:235:99:6053,439,0
CP000253.1 2039454 . G A 6112.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8099;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,236:236:99:6141,439,0
CP000253.1 2040461 . T C 4698.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9061;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,196:197:99:4727,331,0
CP000253.1 2040912 . A G 749.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:54:778,54,0
CP000253.1 2040921 . G A 747.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:54:776,54,0
CP000253.1 2040942 . G A 566.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:42:595,42,0
CP000253.1 2040966 . T C 478.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:507,36,0
CP000253.1 2041260 . T C 1444.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2484;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1473,102,0
CP000253.1 2041363 . T C 1397.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1426,99,0
CP000253.1 2041476 . T C 2272.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.921;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.83;ReadPosRankSum=-1.540;SOR=0.503 GT:AD:DP:GQ:PL 1/1:1,87:88:99:2301,169,0
CP000253.1 2041884 . G A 5222.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.3813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,220:222:99:5251,370,0
CP000253.1 2042006 . C T 2973.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,119:120:99:3002,217,0
CP000253.1 2042059 . G A 1479.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.784;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.92;ReadPosRankSum=0.196;SOR=0.343 GT:AD:DP:GQ:PL 1/1:1,52:54:99:1508,111,0
CP000253.1 2042715 . C T 5044.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,212:213:99:5073,349,0
CP000253.1 2042763 . C T 4897.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,201:202:99:4926,343,0
CP000253.1 2042820 . G A 4482.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0783;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.926 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4511,316,0
CP000253.1 2042863 . T C 3249.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3278,232,0
CP000253.1 2043354 . C T 2550.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.633;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6970;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.62;ReadPosRankSum=2.120;SOR=0.515 GT:AD:DP:GQ:PL 1/1:2,106:109:99:2579,181,0
CP000253.1 2043612 . G A 1985.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=59.14;MQ0=0;QD=26.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2014,144,0
CP000253.1 2043615 . G A 1964.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3097;MLEAC=2;MLEAF=1.00;MQ=59.14;MQ0=0;QD=26.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1993,144,0
CP000253.1 2043621 . G A 1958.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=59.14;MQ0=0;QD=26.83;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1987,141,0
CP000253.1 2043623 . T A 1870.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.787;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=59.12;MQ0=0;MQRankSum=-0.183;QD=26.35;ReadPosRankSum=-1.001;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,70:72:99:1899,135,0
CP000253.1 2043627 . A T 1912.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=59.12;MQ0=0;QD=26.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1941,138,0
CP000253.1 2043633 . C T 1841.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.918;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=59.09;MQ0=0;MQRankSum=-0.185;QD=26.31;ReadPosRankSum=0.694;SOR=0.268 GT:AD:DP:GQ:PL 1/1:1,69:70:99:1870,132,0
CP000253.1 2043636 . G A 1830.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=59.09;MQ0=0;QD=26.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1859,132,0
CP000253.1 2043642 . A G 1910.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5575;MLEAC=2;MLEAF=1.00;MQ=59.09;MQ0=0;QD=27.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1939,138,0
CP000253.1 2043648 . A G 1904.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6634;MLEAC=2;MLEAF=1.00;MQ=59.09;MQ0=0;QD=27.21;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1933,138,0
CP000253.1 2043656 . A G 1852.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6634;MLEAC=2;MLEAF=1.00;MQ=59.08;MQ0=0;QD=26.85;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1881,135,0
CP000253.1 2043657 . C T 1874.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6634;MLEAC=2;MLEAF=1.00;MQ=59.08;MQ0=0;QD=27.17;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1903,135,0
CP000253.1 2043666 . T G 1790.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.928;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;MQRankSum=-0.187;QD=26.33;ReadPosRankSum=1.581;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,67:68:99:1819,129,0
CP000253.1 2043678 . C A 92.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:120,9,0
CP000253.1 2043972 . C T 333.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.00;MQ0=0;QD=36.21;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:362,27,0
CP000253.1 2043975 . G A 332.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.00;MQ0=0;QD=30.36;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:361,27,0
CP000253.1 2044376 . T A 3757.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.10;MQ0=0;QD=26.65;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3786,268,0
CP000253.1 2044379 . T A 3794.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.10;MQ0=0;QD=26.91;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3823,274,0
CP000253.1 2044381 . T C 3829.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.10;MQ0=0;QD=27.36;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3858,274,0
CP000253.1 2044403 . C T 4484.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8543;MLEAC=2;MLEAF=1.00;MQ=59.35;MQ0=0;QD=25.77;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,174:175:99:4513,319,0
CP000253.1 2044412 . A G 4613.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0929;MLEAC=2;MLEAF=1.00;MQ=59.42;MQ0=0;QD=25.78;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4642,331,0
CP000253.1 2044424 . A G 4741.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8552;MLEAC=2;MLEAF=1.00;MQ=59.43;MQ0=0;QD=26.49;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,179:180:99:4770,343,0
CP000253.1 2044490 . T C 4118.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,160:161:99:4147,295,0
CP000253.1 2044553 . G A 4456.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9409;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=25.76;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4485,319,0
CP000253.1 2044629 . A G 4404.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5323;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;MQRankSum=-0.054;QD=25.17;ReadPosRankSum=1.366;SOR=0.409 GT:AD:DP:GQ:PL 1/1:1,174:176:99:4433,316,0
CP000253.1 2044661 . G A 4474.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6325;MLEAC=2;MLEAF=1.00;MQ=59.61;MQ0=0;QD=24.45;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4503,319,0
CP000253.1 2044691 . A T 4218.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=59.39;MQ0=0;QD=26.20;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4247,301,0
CP000253.1 2044694 . C T 4102.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.37;MQ0=0;QD=25.97;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4131,295,0
CP000253.1 2044697 . A T 4081.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.37;MQ0=0;QD=25.83;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4110,289,0
CP000253.1 2044709 . C T 329.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:27:358,27,0
CP000253.1 2044714 . T G 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 2044715 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 2045292 . G A 5270.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9001;MLEAC=2;MLEAF=1.00;MQ=59.57;MQ0=0;QD=25.22;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,209:209:99:5299,373,0
CP000253.1 2045318 . A G 5746.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6541;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=25.43;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,226:227:99:5775,409,0
CP000253.1 2045321 . G A 5801.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5407;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=25.56;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,227:227:99:5830,409,0
CP000253.1 2045324 . A G 5891.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.839;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6187;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;MQRankSum=-0.100;QD=25.73;ReadPosRankSum=2.114;SOR=0.541 GT:AD:DP:GQ:PL 1/1:1,228:229:99:5920,418,0
CP000253.1 2045330 . T A 6091.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9718;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;MQRankSum=-0.098;QD=25.49;ReadPosRankSum=1.935;SOR=0.470 GT:AD:DP:GQ:PL 1/1:1,238:240:99:6120,436,0
CP000253.1 2045341 . G T 5979.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9402;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.77;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,232:232:99:6008,424,0
CP000253.1 2045342 . A G 5882.77 . AC=2;AF=1.00;AN=2;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9668;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.58;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,230:232:99:5911,418,0
CP000253.1 2045345 . T C 5906.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9668;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.79;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,229:233:99:5935,421,0
CP000253.1 2045360 . T C 5993.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4720;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.72;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,233:234:99:6022,424,0
CP000253.1 2045363 . G A 5903.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.025;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4995;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=-0.047;QD=25.67;ReadPosRankSum=1.895;SOR=0.407 GT:AD:DP:GQ:PL 1/1:1,229:230:99:5932,415,0
CP000253.1 2045366 . T C 5813.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4720;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.17;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,231:234:99:5842,415,0
CP000253.1 2045375 . G A 6028.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9247;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.22;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,239:239:99:6057,424,0
CP000253.1 2045387 . G T 6146.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7455;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.51;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6175,436,0
CP000253.1 2045393 . A G 5795.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.775;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.31;ReadPosRankSum=0.733;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,228:231:99:5824,418,0
CP000253.1 2045414 . C T 6234.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,245:245:99:6263,445,0
CP000253.1 2045417 . T G 6094.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.117;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.98;ReadPosRankSum=1.526;SOR=0.383 GT:AD:DP:GQ:PL 1/1:3,241:245:99:6123,433,0
CP000253.1 2045420 . G A 6375.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0499;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6404,448,0
CP000253.1 2045546 . A C 5969.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.002;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.7017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=0.823;SOR=0.469 GT:AD:DP:GQ:PL 1/1:3,240:244:99:5998,416,0
CP000253.1 2045582 . A C 6090.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4607;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6119,436,0
CP000253.1 2045588 . G A 6266.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.004;DP=243;Dels=0.00;ExcessHet=3.0103;FS=2.283;HaplotypeScore=16.3781;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.79;ReadPosRankSum=0.905;SOR=0.659 GT:AD:DP:GQ:PL 1/1:3,240:243:99:6295,413,0
CP000253.1 2045595 . C T 6092.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,239:239:99:6121,433,0
CP000253.1 2045597 . A T 6154.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5913;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,237:237:99:6183,436,0
CP000253.1 2045645 . A G 5719.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4668;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,228:231:99:5748,403,0
CP000253.1 2045666 . A G 5507.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,222:223:99:5536,391,0
CP000253.1 2045672 . T C 5532.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.776;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3003;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.59;ReadPosRankSum=1.733;SOR=0.516 GT:AD:DP:GQ:PL 1/1:1,224:225:99:5561,391,0
CP000253.1 2045696 . A G 5336.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2690;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,215:215:99:5365,376,0
CP000253.1 2045744 . G A 4684.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4713,334,0
CP000253.1 2045747 . C T 4542.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.701;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.96;ReadPosRankSum=0.176;SOR=0.935 GT:AD:DP:GQ:PL 1/1:2,173:175:99:4571,322,0
CP000253.1 2045750 . T A 3912.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.900;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.24;ReadPosRankSum=1.710;SOR=0.477 GT:AD:DP:GQ:PL 1/1:1,154:155:99:3941,280,0
CP000253.1 2045766 . C T 3382.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3411,241,0
CP000253.1 2045768 . A C 3288.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3317,235,0
CP000253.1 2045776 . C T 3409.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3438,241,0
CP000253.1 2045777 . A G 3422.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3451,241,0
CP000253.1 2045786 . T C 3336.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,131:132:99:3365,238,0
CP000253.1 2045810 . G A 3081.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9138;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,124:126:99:3110,220,0
CP000253.1 2045831 . T A 2766.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2795,196,0
CP000253.1 2045835 . T C 2948.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7523;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2977,211,0
CP000253.1 2045842 . T C 2899.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2928,205,0
CP000253.1 2045846 . A G 2363.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.947 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2392,169,0
CP000253.1 2045858 . G A 2350.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8318;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=1.029 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2379,169,0
CP000253.1 2045881 . C T 2238.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=1.046 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2267,160,0
CP000253.1 2045910 . T C 2214.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2243,160,0
CP000253.1 2045915 . G A 2160.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2189,157,0
CP000253.1 2045921 . A G 2184.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=1.065 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2213,157,0
CP000253.1 2045927 . T C 2253.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.51;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,85:86:99:2282,163,0
CP000253.1 2045931 . T C 2286.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2315,166,0
CP000253.1 2045939 . C T 2021.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2050,144,0
CP000253.1 2045942 . A G 1973.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2002,141,0
CP000253.1 2045948 . A C 2004.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2033,144,0
CP000253.1 2046222 . G A 1563.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1592,108,0
CP000253.1 2046353 . A G 1599.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.462;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.62;ReadPosRankSum=-1.485;SOR=0.749 GT:AD:DP:GQ:PL 1/1:2,72:74:73:1628,73,0
CP000253.1 2046359 . C T 1675.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1704,117,0
CP000253.1 2046368 . T C 1634.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1663,114,0
CP000253.1 2046374 . G A 1492.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1521,105,0
CP000253.1 2046386 . G A 1373.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:61:96:1402,96,0
CP000253.1 2046395 . G A 181.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:210,15,0
CP000253.1 2046398 . T A 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046401 . T A 169.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:198,15,0
CP000253.1 2046407 . A T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046409 . G A 169.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:198,15,0
CP000253.1 2046413 . A T 173.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:202,15,0
CP000253.1 2046416 . G A 175.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:204,15,0
CP000253.1 2046419 . C G 176.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:205,15,0
CP000253.1 2046421 . C A 181.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:210,15,0
CP000253.1 2046422 . T C 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046425 . G A 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046430 . T A 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046431 . A G 170.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:199,15,0
CP000253.1 2046434 . C A 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046436 . A G 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046437 . A T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046440 . A G 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046446 . A T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046448 . T A 181.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:210,15,0
CP000253.1 2046452 . C A 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2046464 . A T 644.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:25:48:673,48,0
CP000253.1 2046470 . G T 696.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,26:26:51:725,51,0
CP000253.1 2046476 . T C 827.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:60:856,60,0
CP000253.1 2046485 . G A 836.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:60:865,60,0
CP000253.1 2046497 . A G 876.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.831;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.07;ReadPosRankSum=1.449;SOR=0.655 GT:AD:DP:GQ:PL 1/1:1,37:38:63:905,63,0
CP000253.1 2059120 . T C 384.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.60;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:14:30:413,30,0
CP000253.1 2059308 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2059359 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2059383 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2059400 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2059615 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=31.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2060629 . T C 173.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.83;MQ0=0;QD=17.39;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:15:202,15,0
CP000253.1 2060687 . C A 400.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=50.54;MQ0=0;QD=21.09;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:429,33,0
CP000253.1 2060705 . C T 489.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.76;MQ0=0;QD=21.29;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:518,39,0
CP000253.1 2060709 . T C 489.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.76;MQ0=0;QD=21.29;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:518,39,0
CP000253.1 2060723 . T C 590.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.57;MQ0=0;QD=20.37;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:45:619,45,0
CP000253.1 2060744 . T C 595.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.57;MQ0=0;QD=20.54;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:45:624,45,0
CP000253.1 2060807 . A G 604.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7802;MLEAC=2;MLEAF=1.00;MQ=52.86;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:633,48,0
CP000253.1 2060820 . T A 498.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8861;MLEAC=2;MLEAF=1.00;MQ=52.83;MQ0=0;QD=20.78;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:527,39,0
CP000253.1 2061638 . G A 1374.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=58.54;MQ0=0;QD=26.44;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1403,99,0
CP000253.1 2061648 . C T 1594.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=58.77;MQ0=0;QD=25.72;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1623,114,0
CP000253.1 2061650 . A C 1575.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=58.77;MQ0=0;QD=25.42;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1604,114,0
CP000253.1 2061947 . G A 3965.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,164:164:99:3994,283,0
CP000253.1 2061978 . C T 3920.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,161:162:99:3949,277,0
CP000253.1 2061988 . T C 3837.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6890;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,158:159:99:3866,274,0
CP000253.1 2062170 . A G 1995.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7430;MLEAC=2;MLEAF=1.00;MQ=59.59;MQ0=0;QD=26.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2024,144,0
CP000253.1 2062175 . A G 1881.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8271;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=25.78;SOR=1.032 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1910,135,0
CP000253.1 2062176 . C G 1932.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8271;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=26.84;SOR=1.073 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1961,138,0
CP000253.1 2062178 . G A 1854.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7997;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=26.12;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1883,132,0
CP000253.1 2062196 . G A 144.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:172,12,0
CP000253.1 2062198 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2062203 . C G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2062211 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2063397 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2063406 . A G 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 2063418 . C T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 2063457 . G A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 2063462 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2063474 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2063527 . A C 13.72 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:40,3,0
CP000253.1 2063574 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2063649 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2063670 . T A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 2063697 . G T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 2063724 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 2063730 . T G 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 2067926 . T C 286.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=59.48;MQ0=0;QD=26.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:315,24,0
CP000253.1 2067927 . G A 309.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=59.48;MQ0=0;QD=28.16;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:27:338,27,0
CP000253.1 2067929 . G T 295.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=59.48;MQ0=0;QD=26.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:324,24,0
CP000253.1 2067932 . A G 379.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=59.62;MQ0=0;QD=25.32;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:30:408,30,0
CP000253.1 2067950 . C T 724.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7574;MLEAC=2;MLEAF=1.00;MQ=59.52;MQ0=0;QD=30.20;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:54:753,54,0
CP000253.1 2067956 . T C 723.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8907;MLEAC=2;MLEAF=1.00;MQ=59.55;MQ0=0;QD=27.84;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:54:752,54,0
CP000253.1 2067959 . A T 720.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.911;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.59;MQ0=0;MQRankSum=-0.235;QD=26.70;ReadPosRankSum=-1.301;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,26:28:54:749,54,0
CP000253.1 2067983 . A G 1175.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.74;MQ0=0;QD=26.13;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:87:1204,87,0
CP000253.1 2068004 . A G 1258.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.76;MQ0=0;QD=25.69;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:93:1287,93,0
CP000253.1 2068012 . G A 1514.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=25.67;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1543,108,0
CP000253.1 2068021 . C A 1634.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;QD=25.95;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1663,117,0
CP000253.1 2068342 . T G 4605.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,195:195:99:4634,322,0
CP000253.1 2068354 . A T 4670.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2696;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=24.45;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,191:191:99:4699,325,0
CP000253.1 2068356 . T C 4700.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5357;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=24.36;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,193:193:99:4729,328,0
CP000253.1 2068373 . T A 4720.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3776;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=23.60;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,200:200:99:4749,328,0
CP000253.1 2068405 . G C 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 2068406 . T A 141.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:169,12,0
CP000253.1 2068409 . A G 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 2073578 . A G 1479.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.09;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1508,102,0
CP000253.1 2073674 . T C 903.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:63:932,63,0
CP000253.1 2073706 . C A 312.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.85;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:341,24,0
CP000253.1 2073717 . G A 315.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.05;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:344,24,0
CP000253.1 2074334 . G T 4298.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4327,298,0
CP000253.1 2074484 . A G 188.98 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.552;DP=11;Dels=0.00;ExcessHet=3.0103;FS=3.424;HaplotypeScore=4.8239;MLEAC=2;MLEAF=1.00;MQ=58.66;MQ0=0;MQRankSum=3.479;QD=17.18;ReadPosRankSum=-1.430;SOR=0.793 GT:AD:DP:GQ:PL 1/1:1,10:11:13:217,13,0
CP000253.1 2074648 . G A 440.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:36:469,36,0
CP000253.1 2074780 . T C 1616.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1645,117,0
CP000253.1 2074798 . C T 1876.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.02;ReadPosRankSum=1.456;SOR=0.857 GT:AD:DP:GQ:PL 1/1:1,74:75:99:1905,135,0
CP000253.1 2074813 . G T 1911.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=1.194 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1940,138,0
CP000253.1 2074852 . A T 2094.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.012;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.64;ReadPosRankSum=1.121;SOR=0.695 GT:AD:DP:GQ:PL 1/1:1,84:87:99:2123,147,0
CP000253.1 2075089 . T C 2943.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0105;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2972,208,0
CP000253.1 2075152 . C T 2189.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2218,154,0
CP000253.1 2075476 . T C 666.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:48:695,48,0
CP000253.1 2075617 . G A 261.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.82;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:290,21,0
CP000253.1 2075636 . T C 188.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:217,15,0
CP000253.1 2075737 . T C 523.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:39:552,39,0
CP000253.1 2076029 . A G 1112.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0731;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1141,81,0
CP000253.1 2076599 . T A 499.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:528,36,0
CP000253.1 2076600 . T G 499.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:528,36,0
CP000253.1 2076601 . G C 497.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:526,36,0
CP000253.1 2076605 . G A 500.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:529,36,0
CP000253.1 2076620 . C T 497.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:526,36,0
CP000253.1 2076627 . A T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2076629 . T A 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 2076635 . A T 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 2076638 . T C 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 2076641 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2076650 . G T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2076653 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2076655 . T C 100.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:128,9,0
CP000253.1 2076659 . C A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2076664 . G T 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 2076671 . C A 101.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:129,9,0
CP000253.1 2076672 . G C 90.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:118,9,0
CP000253.1 2076686 . A G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2076692 . A G 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 2076693 . C T 141.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:169,12,0
CP000253.1 2076697 . G A 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 2076824 . T C 307.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:336,24,0
CP000253.1 2077244 . T C 2056.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2085,144,0
CP000253.1 2077295 . T C 1913.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1942,135,0
CP000253.1 2077595 . C A 705.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:51:734,51,0
CP000253.1 2077599 . G A 737.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,30:30:54:766,54,0
CP000253.1 2077679 . G A 714.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:51:743,51,0
CP000253.1 2077685 . A C 727.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:54:756,54,0
CP000253.1 2077856 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2078136 . A G 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 2078321 . C A 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 2078473 . T A 1968.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,84:85:99:1997,138,0
CP000253.1 2078475 . A T 2048.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1698;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2077,144,0
CP000253.1 2078493 . G C 2137.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2166,150,0
CP000253.1 2078504 . A C 2235.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2264,157,0
CP000253.1 2078517 . T C 2380.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2409,166,0
CP000253.1 2078520 . C T 2334.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2363,163,0
CP000253.1 2078529 . T A 2306.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5684;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2335,160,0
CP000253.1 2078532 . A G 2403.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6744;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2432,169,0
CP000253.1 2078548 . T C 2449.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2478,172,0
CP000253.1 2078550 . A G 2464.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2493,172,0
CP000253.1 2078563 . G A 2356.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2385,166,0
CP000253.1 2078565 . A C 2325.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.73;ReadPosRankSum=-1.574;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,97:98:99:2354,165,0
CP000253.1 2078566 . T A 2351.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.034;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.25;ReadPosRankSum=-1.572;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,96:98:99:2380,166,0
CP000253.1 2078568 . T A 2342.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6050;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.91;ReadPosRankSum=0.796;SOR=0.456 GT:AD:DP:GQ:PL 1/1:1,97:98:99:2371,166,0
CP000253.1 2078571 . A C 2344.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6129;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2373,166,0
CP000253.1 2078574 . C T 2314.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2343,163,0
CP000253.1 2078593 . G C 2922.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,128:128:99:2951,202,0
CP000253.1 2078604 . T A 3065.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,132:134:99:3094,214,0
CP000253.1 2078613 . T A 3189.78 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3218,220,0
CP000253.1 2078622 . G A 3121.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3150,214,0
CP000253.1 2078667 . A G 2874.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6728;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,119:121:99:2903,202,0
CP000253.1 2078694 . C A 2416.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2445,172,0
CP000253.1 2078748 . G A 1900.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,75:76:99:1929,135,0
CP000253.1 2078781 . T C 1340.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5768;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:56:96:1369,96,0
CP000253.1 2078852 . T A 650.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1864;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:679,48,0
CP000253.1 2078881 . C A 860.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:889,63,0
CP000253.1 2078886 . A T 957.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5088;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:69:986,69,0
CP000253.1 2078913 . G A 1842.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5193;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1871,132,0
CP000253.1 2078916 . T C 1961.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.533;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.92;ReadPosRankSum=-0.211;SOR=0.116 GT:AD:DP:GQ:PL 1/1:2,80:82:99:1990,141,0
CP000253.1 2078934 . T A 1998.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2027,141,0
CP000253.1 2079267 . C T 2195.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9662;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2224,154,0
CP000253.1 2079387 . T C 744.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.58;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:57:773,57,0
CP000253.1 2079438 . A G 653.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:682,48,0
CP000253.1 2079534 . A C 795.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:57:824,57,0
CP000253.1 2079598 . T G 695.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:51:724,51,0
CP000253.1 2079602 . C G 590.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:45:619,45,0
CP000253.1 2081787 . A C 93.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:121,9,0
CP000253.1 2081863 . A T 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 2081872 . G A 354.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:383,27,0
CP000253.1 2081884 . T C 363.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:392,27,0
CP000253.1 2081954 . T C 535.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:564,39,0
CP000253.1 2081956 . G A 536.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:565,39,0
CP000253.1 2081998 . G A 444.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:33:473,33,0
CP000253.1 2082403 . G A 219.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:248,18,0
CP000253.1 2082613 . A T 849.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:878,60,0
CP000253.1 2082643 . A C 752.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:54:781,54,0
CP000253.1 2082656 . C T 585.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:614,42,0
CP000253.1 2082724 . T G 413.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:442,30,0
CP000253.1 2082733 . T A 410.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.62;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:439,30,0
CP000253.1 2082739 . A T 369.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:398,27,0
CP000253.1 2082740 . C T 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 2082850 . C T 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 2082937 . A C 367.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:27:396,27,0
CP000253.1 2083122 . T C 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 2083156 . A T 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 2083199 . G C 100.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:128,9,0
CP000253.1 2083214 . G C 62.74 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:6:90,6,0
CP000253.1 2083507 . C T 784.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.06;SOR=1.460 GT:AD:DP:GQ:PL 1/1:0,29:29:57:813,57,0
CP000253.1 2083515 . C T 696.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.070;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=-1.416;SOR=0.593 GT:AD:DP:GQ:PL 1/1:1,26:27:51:725,51,0
CP000253.1 2086719 . G C 1318.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.73;MQ0=0;QD=25.86;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:96:1347,96,0
CP000253.1 2086720 . C T 1375.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.73;MQ0=0;QD=26.98;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1404,99,0
CP000253.1 2086723 . A C 1628.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.77;MQ0=0;QD=27.15;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1657,120,0
CP000253.1 2086727 . T G 1675.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.204;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.77;MQ0=0;MQRankSum=0.000;QD=27.47;ReadPosRankSum=-0.625;SOR=0.280 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1704,123,0
CP000253.1 2086731 . T G 1997.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;QD=28.14;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2026,144,0
CP000253.1 2086751 . T G 2376.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.65;MQ0=0;QD=27.01;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2405,172,0
CP000253.1 2086756 . A T 2365.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2394,169,0
CP000253.1 2086772 . T C 2566.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2595,184,0
CP000253.1 2086914 . T G 3890.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8287;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,160:160:99:3919,274,0
CP000253.1 2087047 . A G 4225.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,160:161:99:4254,310,0
CP000253.1 2087090 . A T 4638.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.789;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8409;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.21;ReadPosRankSum=1.724;SOR=0.639 GT:AD:DP:GQ:PL 1/1:1,176:177:99:4667,334,0
CP000253.1 2087246 . G A 5788.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9729;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,231:231:99:5817,418,0
CP000253.1 2087345 . A T 5132.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.881;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.7445;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.41;ReadPosRankSum=1.458;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,201:204:99:5161,367,0
CP000253.1 2087516 . A T 3502.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3531,253,0
CP000253.1 2087518 . G A 3425.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,132:135:99:3454,247,0
CP000253.1 2087522 . C T 3634.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1379;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.92;ReadPosRankSum=0.475;SOR=0.321 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3663,265,0
CP000253.1 2087528 . T A 3742.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.72;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3771,271,0
CP000253.1 2087530 . T G 3465.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.536;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.48;ReadPosRankSum=0.136;SOR=0.957 GT:AD:DP:GQ:PL 1/1:2,134:136:99:3494,256,0
CP000253.1 2087540 . A G 3886.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3915,280,0
CP000253.1 2087549 . T C 3686.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.33;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3715,277,0
CP000253.1 2087552 . T C 3746.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.079 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3775,274,0
CP000253.1 2087585 . A T 3844.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.477;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5006;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=-0.058;QD=25.63;ReadPosRankSum=1.065;SOR=0.806 GT:AD:DP:GQ:PL 1/1:2,148:150:99:3873,283,0
CP000253.1 2087725 . A T 4082.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.874;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.36;ReadPosRankSum=1.270;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,160:161:99:4111,292,0
CP000253.1 2087777 . C T 4738.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4767,340,0
CP000253.1 2087948 . A T 5198.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.835;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.5435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.11;ReadPosRankSum=0.193;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,206:208:99:5227,373,0
CP000253.1 2087990 . C T 5488.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2158;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,219:219:99:5517,388,0
CP000253.1 2087996 . A T 5522.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.0836;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,223:223:99:5551,391,0
CP000253.1 2088029 . T A 5124.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.5693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.29;ReadPosRankSum=0.485;SOR=0.264 GT:AD:DP:GQ:PL 1/1:1,210:212:99:5153,367,0
CP000253.1 2088149 . G A 3621.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9759;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3650,259,0
CP000253.1 2088218 . C T 3641.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.18;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3670,262,0
CP000253.1 2088227 . A G 3173.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4500;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=1.285 GT:AD:DP:GQ:PL 1/1:0,121:122:99:3202,229,0
CP000253.1 2088311 . A T 1627.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1656,117,0
CP000253.1 2088313 . G A 1598.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5451;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1627,114,0
CP000253.1 2088320 . A T 1620.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6337;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1649,117,0
CP000253.1 2088403 . T C 616.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:645,45,0
CP000253.1 2088404 . G A 618.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:647,45,0
CP000253.1 2088406 . G A 626.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:655,45,0
CP000253.1 2088422 . A T 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 2088424 . T A 394.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.93;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:423,30,0
CP000253.1 2088425 . T C 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2088433 . T C 409.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:438,30,0
CP000253.1 2088442 . A T 401.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:430,30,0
CP000253.1 2088444 . G A 341.96 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.609;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.00;ReadPosRankSum=1.351;SOR=0.395 GT:AD:DP:GQ:PL 0/1:1,17:18:5:369,0,5
CP000253.1 2088447 . C T 405.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:434,30,0
CP000253.1 2088449 . G A 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2088461 . A T 540.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:569,39,0
CP000253.1 2088464 . T C 535.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:564,39,0
CP000253.1 2088491 . C T 766.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8664;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:57:795,57,0
CP000253.1 2088599 . G A 1557.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1586,111,0
CP000253.1 2089318 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 2089339 . T C 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 2089393 . T G 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 2089399 . G A 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 2089489 . T C 777.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:806,54,0
CP000253.1 2089513 . T A 892.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5095;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.77;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:63:921,63,0
CP000253.1 2089597 . G A 813.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:57:842,57,0
CP000253.1 2089657 . A T 400.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:19:30:429,30,0
CP000253.1 2090300 . C T 1458.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3202;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.262 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1487,105,0
CP000253.1 2090330 . G T 1694.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.25;SOR=1.460 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1723,123,0
CP000253.1 2090480 . A T 1588.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.464;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=41.3220;MLEAC=2;MLEAF=1.00;MQ=59.19;MQ0=0;MQRankSum=-0.253;QD=23.03;ReadPosRankSum=-2.296;SOR=0.627 GT:AD:DP:GQ:PL 1/1:3,66:72:99:1617,120,0
CP000253.1 2090517 . G A 1177.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.141;DP=71;Dels=0.00;ExcessHet=3.0103;FS=1.421;HaplotypeScore=38.4671;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.40;ReadPosRankSum=0.406;SOR=1.009 GT:AD:DP:GQ:PL 1/1:8,56:71:55:1206,55,0
CP000253.1 2090588 . A T 1951.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.319 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1980,141,0
CP000253.1 2090602 . A G 1969.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.779;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.62;ReadPosRankSum=1.733;SOR=0.533 GT:AD:DP:GQ:PL 1/1:1,73:74:99:1998,147,0
CP000253.1 2091063 . G A 211.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:240,18,0
CP000253.1 2091074 . A C 133.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:161,12,0
CP000253.1 2091623 . T C 1913.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.004;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.51;ReadPosRankSum=-0.347;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,84:85:99:1942,132,0
CP000253.1 2091641 . T A 1852.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1881,129,0
CP000253.1 2091776 . G A 1071.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.991;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9736;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.82;ReadPosRankSum=1.117;SOR=0.511 GT:AD:DP:GQ:PL 1/1:1,44:45:78:1100,78,0
CP000253.1 2092019 . T A 541.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:570,39,0
CP000253.1 2092053 . T G 487.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:516,36,0
CP000253.1 2092115 . T C 959.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:69:988,69,0
CP000253.1 2092152 . G A 1003.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:72:1032,72,0
CP000253.1 2092386 . A T 521.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:39:550,39,0
CP000253.1 2092503 . T A 2361.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9839;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2390,169,0
CP000253.1 2093015 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2093110 . C T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2093125 . T G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2093135 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 2093136 . T C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2093145 . C T 99.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:127,9,0
CP000253.1 2093278 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2093850 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2093891 . T C 179.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:208,15,0
CP000253.1 2093963 . A T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2095234 . T C 456.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.75;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:485,33,0
CP000253.1 2095240 . T A 496.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:525,36,0
CP000253.1 2095258 . A G 578.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:42:607,42,0
CP000253.1 2095267 . T C 618.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:45:647,45,0
CP000253.1 2095273 . T C 625.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:45:654,45,0
CP000253.1 2095279 . G A 786.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:57:815,57,0
CP000253.1 2095291 . T A 788.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:57:817,57,0
CP000253.1 2095294 . C T 775.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:57:804,57,0
CP000253.1 2095297 . C T 793.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:57:822,57,0
CP000253.1 2095300 . C T 793.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:57:822,57,0
CP000253.1 2095363 . A C 1147.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1176,81,0
CP000253.1 2095376 . C A 926.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:66:955,66,0
CP000253.1 2095377 . C T 921.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:66:950,66,0
CP000253.1 2095381 . C T 907.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:66:936,66,0
CP000253.1 2095387 . T C 905.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:66:934,66,0
CP000253.1 2095389 . A C 904.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:66:933,66,0
CP000253.1 2095423 . C T 990.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1019,72,0
CP000253.1 2095429 . A G 1068.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1097,75,0
CP000253.1 2095432 . A G 1114.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:78:1143,78,0
CP000253.1 2095444 . A T 1319.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1348,93,0
CP000253.1 2095480 . A G 1930.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.336;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.55;ReadPosRankSum=1.733;SOR=0.585 GT:AD:DP:GQ:PL 1/1:1,81:82:99:1959,135,0
CP000253.1 2095483 . T A 1985.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2014,138,0
CP000253.1 2095534 . G A 2837.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.002;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4126;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.89;ReadPosRankSum=1.174;SOR=0.406 GT:AD:DP:GQ:PL 1/1:1,123:124:99:2866,196,0
CP000253.1 2096257 . T A 4307.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5735;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4336,295,0
CP000253.1 2096281 . C T 4443.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,195:195:99:4472,304,0
CP000253.1 2096603 . G A 518.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:39:547,39,0
CP000253.1 2096734 . T A 136.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:164,12,0
CP000253.1 2096780 . C T 172.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.82;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:201,15,0
CP000253.1 2096907 . T C 316.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:345,24,0
CP000253.1 2096918 . T C 441.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:470,33,0
CP000253.1 2097044 . A G 813.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.41;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:57:842,57,0
CP000253.1 2097179 . T A 941.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:69:970,69,0
CP000253.1 2098078 . T C 1415.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1444,102,0
CP000253.1 2098597 . A G 1597.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:71:99:1626,114,0
CP000253.1 2098698 . C T 826.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:60:855,60,0
CP000253.1 2098752 . C A 544.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.67;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:42:573,42,0
CP000253.1 2098795 . C T 272.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2327;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:301,21,0
CP000253.1 2098888 . A G 1012.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1041,72,0
CP000253.1 2098913 . T C 1581.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1610,111,0
CP000253.1 2098948 . C T 1939.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1968,135,0
CP000253.1 2098966 . T C 2077.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2106,144,0
CP000253.1 2099122 . T A 2385.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3673;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2414,169,0
CP000253.1 2099158 . A T 2307.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.821;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6189;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.85;ReadPosRankSum=1.115;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2336,163,0
CP000253.1 2099172 . C G 2185.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4884;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2214,154,0
CP000253.1 2099296 . G A 1917.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1946,135,0
CP000253.1 2099308 . G A 1932.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1961,135,0
CP000253.1 2099569 . A G 531.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:560,39,0
CP000253.1 2099774 . T A 882.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=23.86;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:63:911,63,0
CP000253.1 2100491 . A G 532.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:561,39,0
CP000253.1 2100877 . T G 436.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:465,33,0
CP000253.1 2101171 . G A 1320.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=1.157 GT:AD:DP:GQ:PL 1/1:0,50:50:96:1349,96,0
CP000253.1 2101516 . G A 1918.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1947,138,0
CP000253.1 2101987 . T G 296.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:325,24,0
CP000253.1 2102051 . G A 174.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:15:203,15,0
CP000253.1 2102060 . G A 136.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:164,12,0
CP000253.1 2102097 . A C 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 2102238 . C T 993.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:72:1022,72,0
CP000253.1 2102496 . A G 1323.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=1.314 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1352,99,0
CP000253.1 2102505 . G T 1515.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5601;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.07;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1544,111,0
CP000253.1 2103267 . T C 2022.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,84:85:99:2051,144,0
CP000253.1 2103553 . T C 1008.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1037,72,0
CP000253.1 2104086 . A T 1965.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.971;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.34;ReadPosRankSum=0.394;SOR=0.407 GT:AD:DP:GQ:PL 1/1:1,87:89:99:1994,138,0
CP000253.1 2104687 . G T 264.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:293,21,0
CP000253.1 2104886 . C T 713.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:742,51,0
CP000253.1 2105184 . T C 583.41 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.337;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8319;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.84;ReadPosRankSum=-1.616;SOR=0.321 GT:AD:DP:GQ:PL 1/1:1,27:28:8:611,8,0
CP000253.1 2105240 . T C 842.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.954;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.61;ReadPosRankSum=-0.846;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,38:40:26:871,26,0
CP000253.1 2105777 . G C 5627.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.528;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.36;ReadPosRankSum=-0.564;SOR=0.158 GT:AD:DP:GQ:PL 1/1:2,229:233:99:5656,397,0
CP000253.1 2106347 . G C 2754.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2783,196,0
CP000253.1 2106688 . A T 270.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:299,21,0
CP000253.1 2106785 . C T 185.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:214,15,0
CP000253.1 2106812 . C T 177.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:206,15,0
CP000253.1 2106953 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:4:6:85,6,0
CP000253.1 2106975 . A T 45.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:73,6,0
CP000253.1 2107016 . G A 157.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:186,15,0
CP000253.1 2107284 . C T 294.84 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.894;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=15.52;ReadPosRankSum=0.733;SOR=0.804 GT:AD:DP:GQ:PL 0/1:2,17:19:18:323,0,18
CP000253.1 2107993 . T A 3322.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2211;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3351,232,0
CP000253.1 2108067 . A T 3827.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4957;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,166:166:99:3856,265,0
CP000253.1 2108325 . A C 1517.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1546,111,0
CP000253.1 2108478 . C T 831.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.73;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:63:860,63,0
CP000253.1 2108550 . A T 1363.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4567;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.077 GT:AD:DP:GQ:PL 1/1:0,53:54:99:1392,102,0
CP000253.1 2108649 . C T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 2108707 . A C 2952.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.168;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.20;ReadPosRankSum=2.287;SOR=0.378 GT:AD:DP:GQ:PL 1/1:3,119:122:99:2981,211,0
CP000253.1 2108975 . C T 4452.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,177:178:99:4481,313,0
CP000253.1 2109009 . G A 4288.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9261;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4317,301,0
CP000253.1 2109027 . G A 4185.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4214,298,0
CP000253.1 2109102 . T C 4035.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,172:173:99:4064,286,0
CP000253.1 2109299 . C T 2407.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7129;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2436,175,0
CP000253.1 2109315 . C T 2252.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=1.192 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2281,166,0
CP000253.1 2109437 . G A 2880.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4779;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2909,205,0
CP000253.1 2109540 . T C 3171.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3200,223,0
CP000253.1 2109559 . C A 3233.06 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.758;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.26;ReadPosRankSum=1.197;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,138:139:99:3262,226,0
CP000253.1 2109581 . C T 3107.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,131:132:99:3136,217,0
CP000253.1 2110274 . A T 2105.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2134,150,0
CP000253.1 2110286 . G T 1880.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6292;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1909,135,0
CP000253.1 2110358 . C T 1271.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:93:1300,93,0
CP000253.1 2111032 . T C 2283.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4722;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2312,163,0
CP000253.1 2111251 . T C 724.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:753,54,0
CP000253.1 2112291 . A G 2272.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7830;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:99:99:2301,160,0
CP000253.1 2112489 . A C 1723.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1752,129,0
CP000253.1 2113302 . T A 2799.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.639;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.93;ReadPosRankSum=0.489;SOR=0.319 GT:AD:DP:GQ:PL 1/1:1,116:118:99:2828,202,0
CP000253.1 2113392 . A G 2014.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.578;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4422;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=1.669;SOR=0.327 GT:AD:DP:GQ:PL 1/1:1,81:82:99:2043,144,0
CP000253.1 2113589 . C T 2402.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,93:95:99:2431,175,0
CP000253.1 2113620 . T C 2635.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2322;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2664,187,0
CP000253.1 2113716 . T C 3047.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4724;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3076,220,0
CP000253.1 2113722 . G A 2869.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2898,202,0
CP000253.1 2113797 . A T 3001.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5755;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3030,214,0
CP000253.1 2114382 . A T 2387.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2416,172,0
CP000253.1 2115203 . C T 4784.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.469;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5666;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.11;ReadPosRankSum=1.406;SOR=0.965 GT:AD:DP:GQ:PL 1/1:2,205:210:99:4813,337,0
CP000253.1 2115649 . C A 569.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:598,42,0
CP000253.1 2115656 . T C 581.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:42:610,42,0
CP000253.1 2115708 . T C 1115.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1144,81,0
CP000253.1 2115768 . T C 1737.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.03;SOR=1.430 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1766,126,0
CP000253.1 2115819 . C T 2766.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=1.257 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2795,199,0
CP000253.1 2115846 . A G 3507.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.708;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5602;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.24;ReadPosRankSum=-0.811;SOR=0.425 GT:AD:DP:GQ:PL 1/1:1,138:141:99:3536,253,0
CP000253.1 2116145 . G A 5092.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0921;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,206:206:99:5121,361,0
CP000253.1 2117495 . T C 4308.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,176:179:99:4337,307,0
CP000253.1 2117754 . G A 6170.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.803;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8176;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=-0.551;SOR=0.398 GT:AD:DP:GQ:PL 1/1:1,241:243:99:6199,442,0
CP000253.1 2117799 . G A 6313.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.537;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.9096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.56;ReadPosRankSum=-1.765;SOR=0.357 GT:AD:DP:GQ:PL 1/1:2,245:249:99:6342,451,0
CP000253.1 2117900 . G A 6455.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.939;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8682;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.14;ReadPosRankSum=0.877;SOR=0.230 GT:AD:DP:GQ:PL 1/1:1,246:248:99:6484,458,0
CP000253.1 2118549 . T C 3853.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3882,271,0
CP000253.1 2118556 . A T 3884.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.849;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.74;ReadPosRankSum=0.993;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,156:158:99:3913,254,0
CP000253.1 2118890 . T C 6766.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.18;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6795,488,0
CP000253.1 2119200 . G A 6068.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3058;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,238:240:99:6097,430,0
CP000253.1 2119517 . A T 2071.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.165 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2100,150,0
CP000253.1 2119607 . T C 2671.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8047;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.07;ReadPosRankSum=1.233;SOR=0.253 GT:AD:DP:GQ:PL 1/1:1,110:111:99:2700,190,0
CP000253.1 2119664 . T C 3355.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3384,241,0
CP000253.1 2119670 . G A 3438.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0187;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3467,247,0
CP000253.1 2119886 . C T 5380.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5287;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.91;ReadPosRankSum=0.858;SOR=0.334 GT:AD:DP:GQ:PL 1/1:1,215:216:99:5409,382,0
CP000253.1 2119946 . T C 5729.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.561;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.2361;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.04;ReadPosRankSum=1.925;SOR=0.143 GT:AD:DP:GQ:PL 1/1:2,218:223:99:5758,406,0
CP000253.1 2121062 . C T 4226.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4255,298,0
CP000253.1 2121085 . T A 3557.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3586,250,0
CP000253.1 2121086 . T G 3587.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.951;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.24;ReadPosRankSum=-0.023;SOR=0.512 GT:AD:DP:GQ:PL 1/1:1,147:148:99:3616,253,0
CP000253.1 2121095 . G A 3614.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,146:148:99:3643,253,0
CP000253.1 2121096 . G A 3577.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3606,250,0
CP000253.1 2121098 . C A 3522.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3551,247,0
CP000253.1 2121167 . G A 3204.83 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3234,226,0
CP000253.1 2121307 . G A 982.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:72:1011,72,0
CP000253.1 2121391 . C T 1197.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,46:46:87:1226,87,0
CP000253.1 2121502 . A G 3477.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.502;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.88;ReadPosRankSum=-0.526;SOR=0.895 GT:AD:DP:GQ:PL 1/1:2,150:152:99:3506,205,0
CP000253.1 2121785 . G T 6230.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6259,442,0
CP000253.1 2121791 . T A 5995.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9349;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6024,427,0
CP000253.1 2121815 . C T 6076.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6105,424,0
CP000253.1 2121826 . A T 5926.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.782;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.0694;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.80;ReadPosRankSum=-0.049;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,248:250:99:5955,415,0
CP000253.1 2121838 . C T 5970.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,240:241:99:5999,418,0
CP000253.1 2121841 . T A 6077.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9118;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6106,427,0
CP000253.1 2121886 . C T 5862.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4447;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,228:230:99:5891,421,0
CP000253.1 2121943 . G C 6313.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6342,445,0
CP000253.1 2122099 . T C 5392.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,215:215:99:5421,379,0
CP000253.1 2122150 . A G 4124.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4166;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,171:172:99:4153,289,0
CP000253.1 2122156 . G T 3951.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8237;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,166:166:99:3980,280,0
CP000253.1 2122168 . T C 3993.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4441;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=1.088 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4022,283,0
CP000253.1 2122174 . T C 3886.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0728;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=1.100 GT:AD:DP:GQ:PL 1/1:0,155:156:99:3915,277,0
CP000253.1 2122177 . T C 3985.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1703;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=1.108 GT:AD:DP:GQ:PL 1/1:0,158:159:99:4014,280,0
CP000253.1 2122183 . A G 3783.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0721;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3812,268,0
CP000253.1 2122192 . A T 3173.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.170 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3202,226,0
CP000253.1 2122195 . G T 3104.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.891;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2181;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=-1.006;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,123:124:99:3133,220,0
CP000253.1 2122234 . A T 1444.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6927;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=1.199 GT:AD:DP:GQ:PL 1/1:0,56:57:99:1473,105,0
CP000253.1 2122240 . A G 1335.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1364,96,0
CP000253.1 2122258 . A T 809.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:33:60:838,60,0
CP000253.1 2122262 . C T 709.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:51:738,51,0
CP000253.1 2122267 . C T 711.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:51:740,51,0
CP000253.1 2122279 . G A 665.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:48:694,48,0
CP000253.1 2122285 . C T 652.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:48:681,48,0
CP000253.1 2122291 . C T 685.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:51:714,51,0
CP000253.1 2122297 . T C 656.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:48:685,48,0
CP000253.1 2122309 . T C 757.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:57:786,57,0
CP000253.1 2122312 . A T 713.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:54:742,54,0
CP000253.1 2122321 . G A 696.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:51:725,51,0
CP000253.1 2122339 . C T 604.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:45:633,45,0
CP000253.1 2122342 . A T 639.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:48:668,48,0
CP000253.1 2122348 . A C 548.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:45:577,45,0
CP000253.1 2122351 . T A 603.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.44;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:45:632,45,0
CP000253.1 2122366 . T A 430.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.72;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:33:459,33,0
CP000253.1 2122677 . T C 976.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.321;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=52.3526;MLEAC=1;MLEAF=0.500;MQ=47.49;MQ0=0;MQRankSum=3.735;QD=13.95;ReadPosRankSum=5.605;SOR=0.914 GT:AD:DP:GQ:PL 0/1:27,43:70:99:1005,0,481
CP000253.1 2122679 . T A 945.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.066;DP=70;Dels=0.01;ExcessHet=3.0103;FS=0.972;HaplotypeScore=59.3453;MLEAC=1;MLEAF=0.500;MQ=47.49;MQ0=0;MQRankSum=3.629;QD=13.71;ReadPosRankSum=5.355;SOR=0.874 GT:AD:DP:GQ:PL 0/1:27,42:69:99:974,0,542
CP000253.1 2122741 . T C 475.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.026;DP=72;Dels=0.00;ExcessHet=3.0103;FS=1.137;HaplotypeScore=14.6958;MLEAC=1;MLEAF=0.500;MQ=44.42;MQ0=0;MQRankSum=-1.879;QD=6.70;ReadPosRankSum=0.513;SOR=0.358 GT:AD:DP:GQ:PL 0/1:45,26:72:99:504,0,958
CP000253.1 2126241 . A G 2958.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4081;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,116:118:99:2987,214,0
CP000253.1 2126246 . C T 2969.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.591;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4081;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.17;ReadPosRankSum=0.532;SOR=0.353 GT:AD:DP:GQ:PL 1/1:2,116:118:99:2998,214,0
CP000253.1 2126357 . G A 31.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.257;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3075;MLEAC=1;MLEAF=0.500;MQ=40.70;MQ0=73;MQRankSum=-2.694;QD=0.19;ReadPosRankSum=-1.111;SOR=0.706 GT:AD:DP:GQ:PL 0/1:112,51:163:60:60,0,1682
CP000253.1 2127746 . C T 93.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.150;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=10.04;MQ0=44;MQRankSum=1.150;QD=1.98;ReadPosRankSum=0.319;SOR=2.788 GT:AD:DP:GQ:PL 1/1:37,10:48:9:121,9,0
CP000253.1 2127774 . C T 214.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.00;MQ0=0;QD=28.37;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:243,18,0
CP000253.1 2128309 . A T 12.77 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:39,3,0
CP000253.1 2128347 . T A 13.72 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:40,3,0
CP000253.1 2128424 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 2128555 . G T 44.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0
CP000253.1 2128635 . C T 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 2128656 . T A 11.83 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=3.94;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:3:38,3,0
CP000253.1 2128677 . C T 100.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:128,9,0
CP000253.1 2128834 . T G 404.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:433,30,0
CP000253.1 2129002 . G A 1862.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1891,132,0
CP000253.1 2129020 . T C 2235.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2264,160,0
CP000253.1 2129317 . A G 6023.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2346;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6052,433,0
CP000253.1 2129407 . T C 6311.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.408;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=42.4599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.19;ReadPosRankSum=0.056;SOR=0.114 GT:AD:DP:GQ:PL 1/1:2,239:243:99:6340,457,0
CP000253.1 2129552 . A G 6494.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.881;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.3184;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.62;ReadPosRankSum=-1.778;SOR=0.064 GT:AD:DP:GQ:PL 1/1:3,241:246:99:6523,479,0
CP000253.1 2129575 . G T 6369.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.7684;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6398,454,0
CP000253.1 2129618 . T A 6519.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.5772;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.29;ReadPosRankSum=1.467;SOR=0.475 GT:AD:DP:GQ:PL 1/1:1,247:248:99:6548,467,0
CP000253.1 2129636 . A G 5897.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=43.7961;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,240:241:99:5926,430,0
CP000253.1 2131565 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.20;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:3:45,3,0
CP000253.1 2131612 . G T 93.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:121,9,0
CP000253.1 2131717 . C T 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 2131807 . A G 136.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:164,12,0
CP000253.1 2131808 . C T 138.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:166,12,0
CP000253.1 2131922 . A G 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 2131934 . G T 346.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.67;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:375,27,0
CP000253.1 2132279 . C T 6179.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6208,433,0
CP000253.1 2132669 . T C 3356.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.001;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.15;ReadPosRankSum=-1.633;SOR=0.656 GT:AD:DP:GQ:PL 1/1:1,138:139:99:3385,235,0
CP000253.1 2133825 . T A 662.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.09;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:691,48,0
CP000253.1 2134053 . A G 1619.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1648,117,0
CP000253.1 2134137 . T C 2668.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7138;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2697,190,0
CP000253.1 2134221 . C T 2931.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,124:124:99:2960,205,0
CP000253.1 2134825 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2135101 . C T 585.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:614,42,0
CP000253.1 2135868 . T A 6747.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6776,491,0
CP000253.1 2136267 . T A 5133.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.858;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.19;ReadPosRankSum=1.220;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,195:197:99:5162,370,0
CP000253.1 2136404 . G T 5697.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.369;DP=241;Dels=0.00;ExcessHet=3.0103;FS=3.212;HaplotypeScore=44.2269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.74;ReadPosRankSum=1.013;SOR=0.380 GT:AD:DP:GQ:PL 1/1:2,238:241:99:5726,388,0
CP000253.1 2136842 . A G 2933.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,120:121:99:2962,208,0
CP000253.1 2137061 . T C 3091.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.354;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6155;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.42;ReadPosRankSum=0.446;SOR=0.229 GT:AD:DP:GQ:PL 1/1:1,131:133:99:3120,212,0
CP000253.1 2137077 . G A 2440.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:105:99:2469,172,0
CP000253.1 2137081 . G T 2475.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2259;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2504,172,0
CP000253.1 2137328 . C T 1481.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1510,105,0
CP000253.1 2137409 . G T 1380.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1409,99,0
CP000253.1 2137421 . A G 1296.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1325,93,0
CP000253.1 2137477 . A T 1153.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:45:84:1182,84,0
CP000253.1 2137480 . G T 1174.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.886;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.97;ReadPosRankSum=0.567;SOR=0.487 GT:AD:DP:GQ:PL 1/1:1,48:49:84:1203,84,0
CP000253.1 2137490 . A T 1504.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1533,108,0
CP000253.1 2137685 . A G 1940.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.898;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.31;ReadPosRankSum=1.335;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,86:88:99:1969,135,0
CP000253.1 2137974 . T A 685.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:51:714,51,0
CP000253.1 2139227 . T G 1260.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:90:1289,90,0
CP000253.1 2141250 . A G 6764.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.968;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.2489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.61;ReadPosRankSum=-0.474;SOR=0.492 GT:AD:DP:GQ:PL 1/1:1,244:248:99:6793,491,0
CP000253.1 2141499 . A C 6419.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.2374;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=25.99;SOR=1.037 GT:AD:DP:GQ:PL 1/1:0,247:249:99:6448,466,0
CP000253.1 2141559 . G C 6090.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1258;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=26.03;SOR=1.116 GT:AD:DP:GQ:PL 1/1:0,234:238:99:6119,439,0
CP000253.1 2142353 . T C 338.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.175;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.20;ReadPosRankSum=1.744;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,13:14:27:367,27,0
CP000253.1 2142403 . A G 302.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:331,24,0
CP000253.1 2143903 . T A 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2144428 . G A 1423.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=1.199 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1452,102,0
CP000253.1 2146391 . A G 2383.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3270;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=1.053 GT:AD:DP:GQ:PL 1/1:0,95:96:99:2412,172,0
CP000253.1 2146716 . A C 1888.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5778;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1917,132,0
CP000253.1 2147971 . A G 51.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0
CP000253.1 2147978 . T G 52.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0
CP000253.1 2147982 . A T 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 2147986 . A C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 2147989 . T G 49.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0
CP000253.1 2147991 . C T 51.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0
CP000253.1 2147998 . C T 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 2148341 . A G 3476.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,139:141:99:3505,247,0
CP000253.1 2148353 . G A 3593.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1826;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3622,256,0
CP000253.1 2148413 . T C 3691.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.768;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=-0.655;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,155:156:99:3720,262,0
CP000253.1 2148581 . T A 4010.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.684;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.87;ReadPosRankSum=-0.849;SOR=0.819 GT:AD:DP:GQ:PL 1/1:2,166:168:99:4039,283,0
CP000253.1 2148881 . A G 985.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:72:1014,72,0
CP000253.1 2150191 . C G 715.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:744,51,0
CP000253.1 2150225 . C A 1561.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.605;DP=69;Dels=0.00;ExcessHet=3.0103;FS=3.203;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.63;ReadPosRankSum=-0.126;SOR=0.410 GT:AD:DP:GQ:PL 1/1:1,68:69:99:1590,111,0
CP000253.1 2150237 . T C 1700.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1729,117,0
CP000253.1 2150289 . T C 2387.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2416,166,0
CP000253.1 2150292 . A G 2475.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,107:108:99:2504,172,0
CP000253.1 2150515 . T C 2269.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2298,160,0
CP000253.1 2150603 . T C 1593.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1622,111,0
CP000253.1 2151301 . C A 1667.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1696,117,0
CP000253.1 2157163 . C T 881.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:63:910,63,0
CP000253.1 2157208 . T C 1017.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:72:1046,72,0
CP000253.1 2157325 . T A 2124.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7994;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2153,153,0
CP000253.1 2157525 . G A 3719.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4346;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=1.063 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3748,265,0
CP000253.1 2157637 . A T 4597.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.8841;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.70;SOR=1.053 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4626,337,0
CP000253.1 2157647 . C T 4191.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=4.830;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.984;HaplotypeScore=44.2993;MLEAC=1;MLEAF=0.500;MQ=59.13;MQ0=0;MQRankSum=4.825;QD=21.50;ReadPosRankSum=7.881;SOR=0.866 GT:AD:DP:GQ:PL 0/1:30,165:196:48:4220,0,48
CP000253.1 2157726 . A C 5373.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.928;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=101.6906;MLEAC=2;MLEAF=1.00;MQ=58.72;MQ0=0;MQRankSum=-0.396;QD=24.21;ReadPosRankSum=0.802;SOR=0.768 GT:AD:DP:GQ:PL 1/1:2,220:227:99:5402,406,0
CP000253.1 2157737 . T C 1919.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.347;DP=231;Dels=0.00;ExcessHet=3.0103;FS=5.067;HaplotypeScore=92.1058;MLEAC=1;MLEAF=0.500;MQ=58.73;MQ0=0;MQRankSum=-0.205;QD=8.46;ReadPosRankSum=0.762;SOR=0.788 GT:AD:DP:GQ:PL 0/1:119,108:231:99:1948,0,2145
CP000253.1 2157747 . T C 2092.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.907;DP=233;Dels=0.00;ExcessHet=3.0103;FS=17.140;HaplotypeScore=84.6965;MLEAC=1;MLEAF=0.500;MQ=58.50;MQ0=0;MQRankSum=0.717;QD=9.14;ReadPosRankSum=0.763;SOR=0.739 GT:AD:DP:GQ:PL 0/1:114,115:233:99:2121,0,1955
CP000253.1 2157776 . A T 2001.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.506;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=119.8851;MLEAC=1;MLEAF=0.500;MQ=58.60;MQ0=1;MQRankSum=0.039;QD=9.10;ReadPosRankSum=-4.939;SOR=0.722 GT:AD:DP:GQ:PL 0/1:112,108:229:99:2030,0,1853
CP000253.1 2157801 . A G 2946.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.492;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.541;HaplotypeScore=111.4911;MLEAC=1;MLEAF=0.500;MQ=58.55;MQ0=1;MQRankSum=1.269;QD=14.17;ReadPosRankSum=2.351;SOR=0.647 GT:AD:DP:GQ:PL 0/1:67,141:219:99:2975,0,1023
CP000253.1 2157807 . G C 2199.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.399;DP=219;Dels=0.00;ExcessHet=3.0103;FS=4.600;HaplotypeScore=122.6515;MLEAC=1;MLEAF=0.500;MQ=58.55;MQ0=1;MQRankSum=1.715;QD=10.18;ReadPosRankSum=1.568;SOR=0.935 GT:AD:DP:GQ:PL 0/1:92,124:219:99:2228,0,1395
CP000253.1 2157833 . A G 411.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.236;DP=210;Dels=0.00;ExcessHet=3.0103;FS=11.550;HaplotypeScore=110.3725;MLEAC=1;MLEAF=0.500;MQ=58.77;MQ0=1;MQRankSum=-2.483;QD=2.08;ReadPosRankSum=1.481;SOR=1.115 GT:AD:DP:GQ:PL 0/1:152,46:210:99:440,0,2576
CP000253.1 2157834 . T C 186.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.273;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.904;HaplotypeScore=110.4032;MLEAC=1;MLEAF=0.500;MQ=58.78;MQ0=1;MQRankSum=-2.533;QD=0.92;ReadPosRankSum=0.156;SOR=1.413 GT:AD:DP:GQ:PL 0/1:168,35:211:99:215,0,3559
CP000253.1 2157865 . G A 121.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.836;DP=195;Dels=0.00;ExcessHet=3.0103;FS=14.008;HaplotypeScore=52.7412;MLEAC=1;MLEAF=0.500;MQ=59.12;MQ0=1;MQRankSum=-3.996;QD=0.64;ReadPosRankSum=0.134;SOR=1.389 GT:AD:DP:GQ:PL 0/1:163,28:195:99:150,0,3564
CP000253.1 2157867 . T C 31.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.743;DP=192;Dels=0.00;ExcessHet=3.0103;FS=2.317;HaplotypeScore=58.8458;MLEAC=1;MLEAF=0.500;MQ=59.11;MQ0=1;MQRankSum=-2.577;QD=0.17;ReadPosRankSum=-0.787;SOR=0.559 GT:AD:DP:GQ:PL 0/1:162,26:192:60:60,0,3569
CP000253.1 2157907 . C G 3949.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.576;DP=170;Dels=0.00;ExcessHet=3.0103;FS=12.328;HaplotypeScore=27.5503;MLEAC=2;MLEAF=1.00;MQ=59.39;MQ0=0;MQRankSum=3.453;QD=23.37;ReadPosRankSum=1.972;SOR=1.138 GT:AD:DP:GQ:PL 1/1:14,155:170:90:3978,90,0
CP000253.1 2157917 . G A 3751.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.559;DP=169;Dels=0.00;ExcessHet=3.0103;FS=10.021;HaplotypeScore=30.5065;MLEAC=2;MLEAF=1.00;MQ=59.66;MQ0=0;MQRankSum=4.562;QD=22.33;ReadPosRankSum=2.575;SOR=1.246 GT:AD:DP:GQ:PL 1/1:18,150:169:71:3780,71,0
CP000253.1 2157926 . A C 3758.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.9347;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;QD=26.47;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3787,277,0
CP000253.1 2157942 . T C 3426.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2255;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.96;SOR=1.437 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3455,253,0
CP000253.1 2157954 . G T 3863.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2596;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=27.60;SOR=1.385 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3892,277,0
CP000253.1 2158005 . C T 3279.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.993 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3308,235,0
CP000253.1 2158010 . T G 3348.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3377,238,0
CP000253.1 2158033 . A T 3277.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3306,235,0
CP000253.1 2158042 . G A 3233.06 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3262,232,0
CP000253.1 2158151 . A T 1796.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1825,129,0
CP000253.1 2158372 . A T 3722.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,147:148:99:3751,265,0
CP000253.1 2158519 . T A 3439.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4396;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3468,244,0
CP000253.1 2158609 . A C 3719.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,152:154:99:3748,268,0
CP000253.1 2158789 . T C 3744.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6251;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.42;ReadPosRankSum=-1.474;SOR=0.264 GT:AD:DP:GQ:PL 1/1:1,166:168:99:3773,265,0
CP000253.1 2160224 . A T 5609.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.501;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8961;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=-0.047;QD=24.82;ReadPosRankSum=0.679;SOR=0.886 GT:AD:DP:GQ:PL 1/1:2,224:227:99:5638,409,0
CP000253.1 2160286 . G A 5089.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.759;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.2576;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.58;ReadPosRankSum=0.139;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,198:202:99:5118,367,0
CP000253.1 2160545 . C G 3016.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:124:99:3045,214,0
CP000253.1 2160627 . T G 2210.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=1.139 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2239,160,0
CP000253.1 2160636 . A C 2077.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=1.165 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2106,153,0
CP000253.1 2160784 . A T 1764.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.1233;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.57;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1793,129,0
CP000253.1 2160808 . C T 1905.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7409;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1934,138,0
CP000253.1 2161035 . C T 3794.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5040;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.073 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3823,274,0
CP000253.1 2161696 . T A 5365.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,221:221:99:5394,376,0
CP000253.1 2162519 . A G 414.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.65;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:33:443,33,0
CP000253.1 2162574 . A G 384.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.699;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.65;ReadPosRankSum=-1.280;SOR=1.108 GT:AD:DP:GQ:PL 1/1:1,14:15:30:413,30,0
CP000253.1 2162601 . A G 860.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:63:889,63,0
CP000253.1 2162879 . A C 5713.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2768;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,244:244:99:5742,400,0
CP000253.1 2163010 . G T 4479.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.969;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7369;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.31;ReadPosRankSum=1.713;SOR=0.599 GT:AD:DP:GQ:PL 1/1:1,176:177:99:4508,316,0
CP000253.1 2163047 . C T 3587.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.39;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,131:132:99:3616,256,0
CP000253.1 2163059 . T C 3443.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.70;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3472,250,0
CP000253.1 2163623 . G T 170.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:199,15,0
CP000253.1 2164878 . T G 1000.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:72:1029,72,0
CP000253.1 2165403 . G T 3481.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3510,247,0
CP000253.1 2165637 . A T 5681.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.5266;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;QD=24.39;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,233:237:99:5710,400,0
CP000253.1 2166163 . G C 3650.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3679,262,0
CP000253.1 2166183 . C A 3361.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.012;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3672;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.26;ReadPosRankSum=-1.489;SOR=0.460 GT:AD:DP:GQ:PL 1/1:1,127:128:99:3390,244,0
CP000253.1 2166414 . G A 908.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5405;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:937,66,0
CP000253.1 2167229 . G A 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 2168145 . T C 6260.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.879;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.53;ReadPosRankSum=-0.815;SOR=0.459 GT:AD:DP:GQ:PL 1/1:1,235:239:99:6289,451,0
CP000253.1 2168298 . T A 4619.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4314;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.956 GT:AD:DP:GQ:PL 1/1:0,177:178:99:4648,334,0
CP000253.1 2170455 . A G 4531.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,178:180:99:4560,331,0
CP000253.1 2171199 . G A 7109.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8666;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.44;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,250:250:99:7138,518,0
CP000253.1 2171466 . G A 5732.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,233:235:99:5761,412,0
CP000253.1 2172133 . C T 498.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:36:527,36,0
CP000253.1 2172817 . G T 1148.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:46:84:1177,84,0
CP000253.1 2172883 . G A 815.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:60:844,60,0
CP000253.1 2174731 . A G 2138.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2167,151,0
CP000253.1 2175403 . A G 5950.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.0068;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,246:246:99:5979,424,0
CP000253.1 2175717 . G A 5537.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4176;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.916 GT:AD:DP:GQ:PL 1/1:0,216:217:99:5566,397,0
CP000253.1 2175762 . T C 5509.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.905;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.0763;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=1.663;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,220:221:99:5538,365,0
CP000253.1 2177364 . G T 4510.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.812;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.69;ReadPosRankSum=0.051;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,168:170:99:4539,325,0
CP000253.1 2177584 . G T 5330.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.977;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2028;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=1.333;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,216:217:99:5359,373,0
CP000253.1 2177711 . C T 3661.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=137;Dels=0.00;ExcessHet=3.0103;FS=3.418;HaplotypeScore=15.2981;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.73;ReadPosRankSum=0.405;SOR=0.561 GT:AD:DP:GQ:PL 1/1:1,136:137:99:3690,243,0
CP000253.1 2179157 . G T 6695.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.00;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6724,485,0
CP000253.1 2179164 . C G 6412.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.679;DP=246;Dels=0.00;ExcessHet=3.0103;FS=3.395;HaplotypeScore=22.1387;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.17;ReadPosRankSum=0.460;SOR=0.548 GT:AD:DP:GQ:PL 1/1:1,244:245:99:6441,463,0
CP000253.1 2179344 . A G 3253.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.445;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.84;ReadPosRankSum=0.704;SOR=0.988 GT:AD:DP:GQ:PL 1/1:2,129:134:99:3282,234,0
CP000253.1 2179351 . A G 3219.84 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0093;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3248,229,0
CP000253.1 2179443 . C A 1732.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=1.196 GT:AD:DP:GQ:PL 1/1:0,66:68:99:1761,126,0
CP000253.1 2179922 . T C 1781.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7178;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=1.117 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1810,129,0
CP000253.1 2180074 . A T 6832.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.44;SOR=1.357 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6861,494,0
CP000253.1 2180467 . G A 4468.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1423;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4497,322,0
CP000253.1 2182024 . C T 5822.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.824;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0451;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=0.028;SOR=0.560 GT:AD:DP:GQ:PL 1/1:1,245:247:99:5851,409,0
CP000253.1 2182425 . A G 415.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:18:33:444,33,0
CP000253.1 2183151 . C T 3456.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8270;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3485,244,0
CP000253.1 2183619 . T C 3655.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.195;DP=149;Dels=0.00;ExcessHet=3.0103;FS=3.041;HaplotypeScore=19.6564;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.54;ReadPosRankSum=0.407;SOR=0.397 GT:AD:DP:GQ:PL 1/1:1,148:149:99:3684,230,0
CP000253.1 2183806 . A G 3661.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,150:151:99:3690,259,0
CP000253.1 2185302 . A G 5719.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=42.0838;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,235:238:99:5748,406,0
CP000253.1 2186052 . C A 219.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:248,18,0
CP000253.1 2186582 . A C 965.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,37:37:72:994,72,0
CP000253.1 2186707 . A T 1157.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:84:1186,84,0
CP000253.1 2187226 . G A 3410.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0903;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3439,241,0
CP000253.1 2187250 . A G 3628.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3117;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3657,262,0
CP000253.1 2187415 . T C 5650.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.8367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,242:244:99:5679,397,0
CP000253.1 2187427 . C T 5851.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,248:250:99:5880,406,0
CP000253.1 2187439 . G A 5534.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.296;DP=245;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1128;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.97;ReadPosRankSum=1.177;SOR=0.807 GT:AD:DP:GQ:PL 1/1:2,239:243:99:5563,350,0
CP000253.1 2187457 . A G 5443.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.610;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8664;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.57;ReadPosRankSum=-0.154;SOR=0.851 GT:AD:DP:GQ:PL 1/1:2,229:232:99:5472,382,0
CP000253.1 2187968 . G A 216.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.68;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:245,18,0
CP000253.1 2188112 . C T 255.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.98;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:21:284,21,0
CP000253.1 2188136 . G A 238.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:267,21,0
CP000253.1 2188140 . T G 243.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:272,21,0
CP000253.1 2188141 . C T 243.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:272,21,0
CP000253.1 2188201 . A G 188.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0
CP000253.1 2188338 . G A 475.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:39:504,39,0
CP000253.1 2188366 . A T 1357.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1386,99,0
CP000253.1 2189842 . C T 2069.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=1.124 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2098,147,0
CP000253.1 2189854 . C T 1636.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1665,117,0
CP000253.1 2189869 . A G 1376.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1405,99,0
CP000253.1 2189881 . G A 1341.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:51:96:1370,96,0
CP000253.1 2190230 . C T 1238.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1267,87,0
CP000253.1 2190350 . T A 2019.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2048,144,0
CP000253.1 2190358 . A G 2028.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,79:80:99:2057,144,0
CP000253.1 2190476 . G T 3617.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1486;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3646,253,0
CP000253.1 2192356 . C T 3822.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.893;DP=150;Dels=0.00;ExcessHet=3.0103;FS=3.837;HaplotypeScore=16.2429;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.49;ReadPosRankSum=1.271;SOR=0.838 GT:AD:DP:GQ:PL 1/1:1,149:150:99:3851,255,0
CP000253.1 2192374 . A G 3357.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3386,241,0
CP000253.1 2192419 . T C 2589.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,100:102:99:2618,187,0
CP000253.1 2192446 . T A 1783.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1812,129,0
CP000253.1 2192668 . G A 332.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:27:361,27,0
CP000253.1 2192818 . A C 1502.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.839;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.24;ReadPosRankSum=-0.450;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,61:62:99:1531,108,0
CP000253.1 2192995 . T C 3197.05 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3225,226,0
CP000253.1 2193359 . G A 1353.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=1.159 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1382,96,0
CP000253.1 2193590 . G A 48.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:76,6,0
CP000253.1 2193644 . A G 48.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:76,6,0
CP000253.1 2193660 . T C 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 2193782 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2193793 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2193808 . A G 135.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:163,12,0
CP000253.1 2193819 . G A 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 2193821 . T C 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 2193827 . G A 167.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:196,15,0
CP000253.1 2194611 . T C 3711.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.833;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1970;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.10;ReadPosRankSum=-0.011;SOR=0.457 GT:AD:DP:GQ:PL 1/1:1,153:154:99:3740,262,0
CP000253.1 2194727 . A G 1914.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1251;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:79:99:1943,138,0
CP000253.1 2194728 . A T 1856.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1885,132,0
CP000253.1 2194804 . A C 973.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.094;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=39.9422;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.65;ReadPosRankSum=-0.952;SOR=0.954 GT:AD:DP:GQ:PL 1/1:2,41:43:33:1002,33,0
CP000253.1 2194936 . C T 1905.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9625;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1934,138,0
CP000253.1 2195167 . C T 2780.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3511;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2809,193,0
CP000253.1 2196877 . T A 1670.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.95;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1699,120,0
CP000253.1 2197229 . G A 4965.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7299;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,201:202:99:4994,352,0
CP000253.1 2197271 . T C 4316.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.878;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.70;ReadPosRankSum=-0.536;SOR=0.558 GT:AD:DP:GQ:PL 1/1:1,167:168:99:4345,310,0
CP000253.1 2197485 . C G 5183.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.783;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.1922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=0.372;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,213:218:99:5212,367,0
CP000253.1 2198003 . A C 3155.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=1.125 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3184,229,0
CP000253.1 2198029 . G A 3215.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.514;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2626;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.14;ReadPosRankSum=0.890;SOR=0.226 GT:AD:DP:GQ:PL 1/1:2,121:123:99:3244,235,0
CP000253.1 2198048 . T C 2952.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1999;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.188 GT:AD:DP:GQ:PL 1/1:0,116:118:99:2981,217,0
CP000253.1 2198099 . T A 2981.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.11;SOR=1.274 GT:AD:DP:GQ:PL 1/1:0,110:111:99:3010,217,0
CP000253.1 2198565 . A T 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2198603 . T A 952.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.16;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:66:981,66,0
CP000253.1 2198666 . G A 1629.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1658,114,0
CP000253.1 2198780 . C A 1639.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.16;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1668,114,0
CP000253.1 2199137 . T G 2806.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:124:99:2835,196,0
CP000253.1 2199611 . T C 855.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.74;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:63:884,63,0
CP000253.1 2200833 . C T 3450.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1245;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3479,244,0
CP000253.1 2201322 . T C 1938.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4923;MLEAC=2;MLEAF=1.00;MQ=40.35;MQ0=32;QD=19.01;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,102:102:99:1967,144,0
CP000253.1 2201420 . G A 2820.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1282;MLEAC=2;MLEAF=1.00;MQ=45.51;MQ0=24;QD=20.89;SOR=0.951 GT:AD:DP:GQ:PL 1/1:4,131:135:99:2849,205,0
CP000253.1 2201446 . A G 2925.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6454;MLEAC=2;MLEAF=1.00;MQ=46.67;MQ0=20;QD=21.67;SOR=0.820 GT:AD:DP:GQ:PL 1/1:2,133:135:99:2954,211,0
CP000253.1 2201853 . T C 108.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.655;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=101.1767;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=0.91;ReadPosRankSum=-5.816;SOR=0.722 GT:AD:DP:GQ:PL 0/1:106,14:120:99:137,0,2398
CP000253.1 2202245 . T C 1306.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:55:93:1335,93,0
CP000253.1 2203338 . C T 1623.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1652,114,0
CP000253.1 2203362 . G A 1411.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.68;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1440,102,0
CP000253.1 2203503 . A G 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2203557 . T A 219.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:248,18,0
CP000253.1 2203558 . C T 209.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:238,18,0
CP000253.1 2203563 . A G 254.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:283,21,0
CP000253.1 2203583 . C T 427.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8290;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:33:456,33,0
CP000253.1 2203606 . A G 638.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:48:667,48,0
CP000253.1 2203667 . T C 1354.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1383,96,0
CP000253.1 2203936 . G T 2272.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4297;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2301,160,0
CP000253.1 2204286 . C G 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 2204316 . T A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2204330 . T A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2204377 . T C 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2204954 . T C 3799.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4035;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,168:169:99:3828,262,0
CP000253.1 2205034 . G T 3824.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8632;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,168:168:99:3853,262,0
CP000253.1 2205152 . G A 829.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:858,60,0
CP000253.1 2205197 . T C 1290.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:93:1319,93,0
CP000253.1 2205281 . T A 2089.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2118,147,0
CP000253.1 2205464 . C T 6336.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,241:243:99:6365,454,0
CP000253.1 2205527 . A G 6684.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6713,482,0
CP000253.1 2205554 . T C 6555.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=0.858 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6584,467,0
CP000253.1 2205593 . T A 6493.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.947;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.08;ReadPosRankSum=1.670;SOR=0.322 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6522,469,0
CP000253.1 2206501 . A G 3071.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.224;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5483;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.19;ReadPosRankSum=1.489;SOR=0.589 GT:AD:DP:GQ:PL 1/1:1,126:128:99:3100,214,0
CP000253.1 2206530 . T C 4162.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0588;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4191,289,0
CP000253.1 2206532 . A T 4159.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.778;DP=181;Dels=0.00;ExcessHet=3.0103;FS=3.259;HaplotypeScore=13.9194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.11;ReadPosRankSum=0.481;SOR=0.422 GT:AD:DP:GQ:PL 1/1:1,179:181:99:4188,289,0
CP000253.1 2206846 . A G 5899.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7846;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,250:250:99:5928,412,0
CP000253.1 2206936 . C T 6039.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7355;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6068,424,0
CP000253.1 2206942 . G A 6027.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6056,421,0
CP000253.1 2207074 . G A 3855.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9059;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,160:160:99:3884,268,0
CP000253.1 2207848 . T A 450.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:479,33,0
CP000253.1 2207955 . C T 139.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.81;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:167,12,0
CP000253.1 2207963 . T A 138.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:166,12,0
CP000253.1 2207980 . A C 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 2208000 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2208088 . C T 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 2208156 . A C 525.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:39:554,39,0
CP000253.1 2208197 . G T 1826.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.195 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1855,129,0
CP000253.1 2208203 . T A 1820.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1849,129,0
CP000253.1 2208238 . A C 3365.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.066;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=-0.862;SOR=0.829 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3394,238,0
CP000253.1 2208547 . G A 6146.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,239:240:99:6175,436,0
CP000253.1 2209120 . C T 3778.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,167:167:99:3807,259,0
CP000253.1 2211402 . T C 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 2211508 . A G 1021.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.802;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4648;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.21;ReadPosRankSum=1.702;SOR=0.292 GT:AD:DP:GQ:PL 1/1:1,45:46:72:1050,72,0
CP000253.1 2211554 . A G 1079.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9905;MLEAC=2;MLEAF=1.00;MQ=59.39;MQ0=0;QD=22.50;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:49:75:1108,75,0
CP000253.1 2211627 . A G 1127.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:78:1156,78,0
CP000253.1 2211672 . A G 899.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:63:928,63,0
CP000253.1 2211727 . C G 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 2211732 . T G 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 2211734 . T C 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 2211736 . T C 318.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:347,24,0
CP000253.1 2211744 . T C 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 2211954 . C T 706.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:735,51,0
CP000253.1 2211979 . A T 968.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:43:69:997,69,0
CP000253.1 2212169 . A C 1430.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1459,99,0
CP000253.1 2212448 . G A 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 2215023 . A G 624.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:653,45,0
CP000253.1 2215125 . T A 809.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:57:838,57,0
CP000253.1 2215142 . C T 943.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:66:972,66,0
CP000253.1 2216131 . A T 865.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:894,63,0
CP000253.1 2216134 . T C 868.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:897,63,0
CP000253.1 2216137 . T A 873.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9996;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:902,63,0
CP000253.1 2216140 . G A 863.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:892,63,0
CP000253.1 2216143 . T A 854.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.152;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.14;ReadPosRankSum=1.745;SOR=0.507 GT:AD:DP:GQ:PL 1/1:1,33:34:63:883,63,0
CP000253.1 2216152 . G T 859.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:888,63,0
CP000253.1 2216161 . A T 868.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:897,63,0
CP000253.1 2216163 . T C 876.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:905,63,0
CP000253.1 2216169 . G C 871.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:900,63,0
CP000253.1 2216170 . G C 871.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:900,63,0
CP000253.1 2216181 . G A 904.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:66:933,66,0
CP000253.1 2216182 . C T 908.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:66:937,66,0
CP000253.1 2216185 . T C 895.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:66:924,66,0
CP000253.1 2216194 . G A 1397.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1426,99,0
CP000253.1 2216196 . A T 1409.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1438,99,0
CP000253.1 2216204 . G C 1430.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1459,102,0
CP000253.1 2216209 . T A 1496.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1525,105,0
CP000253.1 2216282 . C T 1837.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1866,129,0
CP000253.1 2216284 . T C 1839.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,75:76:99:1868,129,0
CP000253.1 2216287 . C T 1845.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1874,129,0
CP000253.1 2216289 . A G 1825.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1854,129,0
CP000253.1 2216290 . C T 1849.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1878,129,0
CP000253.1 2216293 . T C 1796.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1825,126,0
CP000253.1 2216296 . T A 1820.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,74:76:99:1849,129,0
CP000253.1 2216299 . T A 1817.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1846,129,0
CP000253.1 2216347 . G A 2918.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7228;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=23.92;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2947,205,0
CP000253.1 2216395 . G T 3066.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8157;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=24.34;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3095,217,0
CP000253.1 2216434 . C T 3366.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6562;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=23.88;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3395,235,0
CP000253.1 2216455 . T A 3269.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3298,229,0
CP000253.1 2216475 . T C 3490.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4046;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,148:150:99:3519,244,0
CP000253.1 2216515 . G A 3666.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3695,256,0
CP000253.1 2216644 . G A 2292.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2321,163,0
CP000253.1 2216647 . A T 2298.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2327,163,0
CP000253.1 2216650 . G A 2196.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.799;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.68;ReadPosRankSum=0.682;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,88:92:99:2225,157,0
CP000253.1 2216657 . G C 2205.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2234,160,0
CP000253.1 2216658 . T C 2196.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2225,157,0
CP000253.1 2216659 . T G 2208.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2237,159,0
CP000253.1 2216664 . A T 2249.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2278,163,0
CP000253.1 2216668 . T C 2293.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2322,163,0
CP000253.1 2216680 . C T 2552.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2581,181,0
CP000253.1 2216689 . A T 2512.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2541,178,0
CP000253.1 2216697 . G A 2273.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,90:91:99:2302,163,0
CP000253.1 2216698 . A T 2301.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2330,163,0
CP000253.1 2216701 . T C 2296.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2325,163,0
CP000253.1 2216710 . G A 2613.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2642,184,0
CP000253.1 2216770 . C A 1937.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1966,135,0
CP000253.1 2216927 . A C 609.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.51;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:48:638,48,0
CP000253.1 2217067 . C T 841.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.51;ReadPosRankSum=1.752;SOR=1.051 GT:AD:DP:GQ:PL 1/1:1,32:33:63:870,63,0
CP000253.1 2217103 . A C 1353.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.850;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6763;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.54;ReadPosRankSum=1.017;SOR=1.293 GT:AD:DP:GQ:PL 1/1:1,52:53:99:1382,99,0
CP000253.1 2217133 . G A 2451.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.24;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2480,178,0
CP000253.1 2217142 . T C 2519.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.938;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.98;ReadPosRankSum=-0.429;SOR=0.484 GT:AD:DP:GQ:PL 1/1:1,96:97:99:2548,184,0
CP000253.1 2217157 . C T 2871.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=1.241 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2900,205,0
CP000253.1 2217163 . T A 3072.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.707;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.39;ReadPosRankSum=-1.831;SOR=0.215 GT:AD:DP:GQ:PL 1/1:2,119:122:99:3101,220,0
CP000253.1 2217172 . C T 3093.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.993;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.22;ReadPosRankSum=1.028;SOR=0.436 GT:AD:DP:GQ:PL 1/1:1,117:118:99:3122,220,0
CP000253.1 2217175 . T C 3116.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0473;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=1.198 GT:AD:DP:GQ:PL 1/1:0,119:120:99:3145,223,0
CP000253.1 2217178 . C T 3128.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8302;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=1.160 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3157,223,0
CP000253.1 2217271 . C T 5429.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8449;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.268 GT:AD:DP:GQ:PL 1/1:0,211:211:99:5458,388,0
CP000253.1 2217304 . T G 6177.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.752;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6939;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.74;ReadPosRankSum=-1.965;SOR=0.216 GT:AD:DP:GQ:PL 1/1:2,238:241:99:6206,442,0
CP000253.1 2217307 . C T 6074.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=1.174 GT:AD:DP:GQ:PL 1/1:0,240:241:99:6103,436,0
CP000253.1 2217313 . T A 6178.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3164;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,240:241:99:6207,439,0
CP000253.1 2217323 . C G 6093.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.104 GT:AD:DP:GQ:PL 1/1:0,240:241:99:6122,436,0
CP000253.1 2217325 . T A 6171.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,239:239:99:6200,439,0
CP000253.1 2217337 . A G 6089.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,242:243:99:6118,436,0
CP000253.1 2217340 . T A 6330.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1637;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6359,448,0
CP000253.1 2217352 . G T 6391.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.911;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=1.691;SOR=0.582 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6420,451,0
CP000253.1 2217358 . T C 6454.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6580;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6483,460,0
CP000253.1 2217376 . T G 6201.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6230,439,0
CP000253.1 2217505 . A T 7043.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.039;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.52;ReadPosRankSum=1.691;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,246:248:99:7072,506,0
CP000253.1 2217604 . A G 6363.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1049;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.63;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,239:239:99:6392,457,0
CP000253.1 2217697 . G A 5382.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5978;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,212:212:99:5411,379,0
CP000253.1 2217799 . G T 4993.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.935;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2602;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.35;ReadPosRankSum=-1.425;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,196:198:99:5022,358,0
CP000253.1 2217802 . G A 4914.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,194:197:99:4943,352,0
CP000253.1 2217814 . A T 5273.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.929;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3283;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.85;ReadPosRankSum=-1.546;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,203:206:99:5302,376,0
CP000253.1 2218762 . T C 1205.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2695;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:87:1234,87,0
CP000253.1 2218971 . C T 657.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:29:48:686,48,0
CP000253.1 2219498 . C G 358.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:387,27,0
CP000253.1 2219546 . C T 1122.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:45:81:1151,81,0
CP000253.1 2219552 . A G 1116.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.963;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.82;ReadPosRankSum=0.889;SOR=0.663 GT:AD:DP:GQ:PL 1/1:1,44:45:81:1145,81,0
CP000253.1 2219585 . T C 1282.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,54:54:93:1311,93,0
CP000253.1 2219597 . T C 1317.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1346,93,0
CP000253.1 2219606 . C T 1569.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1598,111,0
CP000253.1 2219609 . A G 1531.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1560,111,0
CP000253.1 2219621 . C T 1572.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1601,111,0
CP000253.1 2219636 . C T 1668.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1697,120,0
CP000253.1 2219639 . T A 1733.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1762,123,0
CP000253.1 2219657 . T C 1821.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.920;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.36;ReadPosRankSum=0.222;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,77:78:99:1850,129,0
CP000253.1 2219824 . T G 2440.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.631;DP=101;Dels=0.00;ExcessHet=3.0103;FS=3.188;HaplotypeScore=13.8691;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.41;ReadPosRankSum=-0.953;SOR=0.385 GT:AD:DP:GQ:PL 1/1:1,99:101:99:2469,158,0
CP000253.1 2219933 . G A 2660.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.799;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.55;ReadPosRankSum=0.322;SOR=0.465 GT:AD:DP:GQ:PL 1/1:3,110:113:99:2689,174,0
CP000253.1 2220512 . A G 3194.83 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3223,229,0
CP000253.1 2221174 . G A 1646.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1675,117,0
CP000253.1 2221324 . A G 3711.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,162:163:99:3740,262,0
CP000253.1 2221821 . C A 3600.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5688;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3629,253,0
CP000253.1 2221850 . C A 3942.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.039;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6028;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.49;ReadPosRankSum=1.733;SOR=0.509 GT:AD:DP:GQ:PL 1/1:1,160:161:99:3971,277,0
CP000253.1 2223097 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:13:18:264,18,0
CP000253.1 2223413 . C T 3029.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=1.188 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3058,214,0
CP000253.1 2223551 . C A 5570.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.632;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4722;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.79;ReadPosRankSum=2.337;SOR=0.801 GT:AD:DP:GQ:PL 1/1:2,214:216:99:5599,394,0
CP000253.1 2223560 . T C 5281.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.881;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5168;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.27;ReadPosRankSum=1.658;SOR=0.881 GT:AD:DP:GQ:PL 1/1:1,208:210:99:5310,379,0
CP000253.1 2224363 . A C 1607.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1636,114,0
CP000253.1 2224366 . T A 1604.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1633,114,0
CP000253.1 2224372 . T C 1612.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1641,114,0
CP000253.1 2224375 . A T 1564.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1593,114,0
CP000253.1 2224378 . T A 1576.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1605,111,0
CP000253.1 2224379 . G A 1583.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1612,114,0
CP000253.1 2224426 . T A 1794.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1823,126,0
CP000253.1 2224498 . T C 1424.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:61:99:1453,102,0
CP000253.1 2224531 . A G 1448.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1477,102,0
CP000253.1 2224552 . A G 1399.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1428,99,0
CP000253.1 2224738 . T C 2488.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,107:109:99:2517,175,0
CP000253.1 2224878 . C G 796.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:57:825,57,0
CP000253.1 2225003 . C G 964.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:69:993,69,0
CP000253.1 2225015 . G T 966.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:69:995,69,0
CP000253.1 2225263 . C G 3085.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=1.133 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3114,223,0
CP000253.1 2225264 . T C 3093.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=1.115 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3122,220,0
CP000253.1 2225285 . A G 2975.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=1.208 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3004,214,0
CP000253.1 2225286 . G T 2943.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=1.208 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2972,211,0
CP000253.1 2225296 . T C 2600.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2629,187,0
CP000253.1 2225297 . C A 2574.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2603,187,0
CP000253.1 2225300 . A T 2602.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2631,187,0
CP000253.1 2225305 . G T 2577.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2606,184,0
CP000253.1 2225308 . G T 2627.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2656,187,0
CP000253.1 2225309 . G T 2553.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2582,184,0
CP000253.1 2225312 . G T 2600.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2629,187,0
CP000253.1 2225317 . T G 2535.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2564,184,0
CP000253.1 2225318 . G C 2472.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2501,178,0
CP000253.1 2225353 . T G 2747.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.822;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=112.4125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.21;ReadPosRankSum=-0.367;SOR=0.420 GT:AD:DP:GQ:PL 1/1:1,108:109:99:2776,199,0
CP000253.1 2225354 . G A 2609.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.709;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=112.4125;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.39;ReadPosRankSum=0.830;SOR=0.861 GT:AD:DP:GQ:PL 1/1:1,106:109:99:2638,190,0
CP000253.1 2225357 . T A 2761.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=114.8817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2790,199,0
CP000253.1 2225372 . A T 3634.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7743;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=1.195 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3663,259,0
CP000253.1 2225421 . G A 2223.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.605;DP=247;Dels=0.00;ExcessHet=3.0103;FS=5.418;HaplotypeScore=60.8772;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=9.04;ReadPosRankSum=-12.935;SOR=0.361 GT:AD:DP:GQ:PL 0/1:127,119:247:99:2252,0,2297
CP000253.1 2225425 . A G 2184.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.005;DP=246;Dels=0.00;ExcessHet=3.0103;FS=6.472;HaplotypeScore=60.0306;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.99;ReadPosRankSum=-12.423;SOR=0.381 GT:AD:DP:GQ:PL 0/1:125,118:246:99:2213,0,2154
CP000253.1 2225426 . A G 2176.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.758;DP=246;Dels=0.00;ExcessHet=3.0103;FS=5.436;HaplotypeScore=60.1362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=8.92;ReadPosRankSum=-12.541;SOR=0.405 GT:AD:DP:GQ:PL 0/1:125,119:246:99:2205,0,2322
CP000253.1 2225504 . T A 6258.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.09;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,231:231:99:6287,451,0
CP000253.1 2225750 . A T 4876.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,189:190:99:4905,352,0
CP000253.1 2225805 . T C 4162.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.690;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.02;ReadPosRankSum=-0.747;SOR=0.752 GT:AD:DP:GQ:PL 1/1:1,159:161:99:4191,304,0
CP000253.1 2225844 . G A 3675.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3704,268,0
CP000253.1 2225882 . G A 3425.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9544;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3454,250,0
CP000253.1 2226017 . A T 4704.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4733,340,0
CP000253.1 2226120 . A G 5488.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.3925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,224:226:99:5517,385,0
CP000253.1 2226152 . A C 5701.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9523;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,229:230:99:5730,400,0
CP000253.1 2226177 . G A 5571.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,221:221:99:5600,394,0
CP000253.1 2226246 . G T 5239.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2220;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=26.87;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,195:196:99:5268,376,0
CP000253.1 2226278 . A G 4931.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4005;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=26.80;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4960,355,0
CP000253.1 2226330 . A G 4959.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5151;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=26.81;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4988,361,0
CP000253.1 2226419 . T C 4432.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1676;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=26.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4461,316,0
CP000253.1 2226424 . C T 4807.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2953;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=26.42;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4836,343,0
CP000253.1 2226482 . C T 4776.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5015;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4805,340,0
CP000253.1 2226560 . G A 5950.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4267;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,229:229:99:5979,424,0
CP000253.1 2226588 . T A 5609.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.579;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.09;ReadPosRankSum=1.560;SOR=0.147 GT:AD:DP:GQ:PL 1/1:2,213:215:99:5638,403,0
CP000253.1 2226590 . A T 5629.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.0009;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,212:213:99:5658,403,0
CP000253.1 2226751 . T C 6269.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.792;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8711;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.80;ReadPosRankSum=-0.463;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,242:243:99:6298,451,0
CP000253.1 2226827 . G A 6514.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6543,473,0
CP000253.1 2226848 . T C 6509.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.711;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.4096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.46;ReadPosRankSum=1.627;SOR=0.366 GT:AD:DP:GQ:PL 1/1:1,245:246:99:6538,478,0
CP000253.1 2226983 . T A 6588.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.049;DP=249;Dels=0.00;ExcessHet=3.0103;FS=2.899;HaplotypeScore=14.5543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.46;ReadPosRankSum=-0.207;SOR=0.196 GT:AD:DP:GQ:PL 1/1:2,247:249:99:6617,412,0
CP000253.1 2226992 . A T 6730.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.982;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8621;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.14;ReadPosRankSum=1.044;SOR=0.171 GT:AD:DP:GQ:PL 1/1:2,246:249:99:6759,482,0
CP000253.1 2227017 . A G 6243.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.199;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7981;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.18;ReadPosRankSum=-0.901;SOR=0.441 GT:AD:DP:GQ:PL 1/1:1,247:249:99:6272,417,0
CP000253.1 2227069 . C T 6113.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.922;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.16;ReadPosRankSum=-1.647;SOR=0.363 GT:AD:DP:GQ:PL 1/1:1,242:243:99:6142,408,0
CP000253.1 2227137 . C T 5304.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.45;ReadPosRankSum=-0.016;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,216:218:99:5333,345,0
CP000253.1 2227952 . C T 2007.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.28;SOR=1.195 GT:AD:DP:GQ:PL 1/1:0,71:72:99:2036,147,0
CP000253.1 2228110 . C T 5434.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.001;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9726;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.82;ReadPosRankSum=0.222;SOR=0.383 GT:AD:DP:GQ:PL 1/1:1,218:219:99:5463,382,0
CP000253.1 2228360 . A G 5424.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.373;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.83;ReadPosRankSum=-0.146;SOR=0.973 GT:AD:DP:GQ:PL 1/1:2,208:214:99:5453,394,0
CP000253.1 2228411 . A T 5488.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,209:210:99:5517,391,0
CP000253.1 2228420 . A C 5371.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5903;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,209:210:99:5400,385,0
CP000253.1 2228426 . T C 5554.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,213:213:99:5583,400,0
CP000253.1 2228435 . C T 5540.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2305;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,211:211:99:5569,400,0
CP000253.1 2228450 . C T 5937.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1311;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,225:225:99:5966,424,0
CP000253.1 2228486 . C T 5564.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7685;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,216:217:99:5593,400,0
CP000253.1 2228487 . T G 5601.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.903;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=-0.072;SOR=0.434 GT:AD:DP:GQ:PL 1/1:1,216:217:99:5630,400,0
CP000253.1 2228488 . G T 5725.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1087;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,217:217:99:5754,406,0
CP000253.1 2228582 . T A 4993.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.553;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7877;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.70;ReadPosRankSum=1.696;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,186:188:99:5022,367,0
CP000253.1 2228583 . G T 5402.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.89;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,187:188:99:5431,394,0
CP000253.1 2228642 . T C 5667.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8840;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.78;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,204:204:99:5696,412,0
CP000253.1 2228666 . C A 5599.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.760;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=1.054;SOR=0.403 GT:AD:DP:GQ:PL 1/1:1,216:217:99:5628,406,0
CP000253.1 2228693 . C T 5799.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4354;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5828,415,0
CP000253.1 2228708 . T A 5504.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2439;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,206:207:99:5533,400,0
CP000253.1 2228714 . A C 5282.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,202:202:99:5311,382,0
CP000253.1 2228789 . A T 5542.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,218:219:99:5571,394,0
CP000253.1 2228828 . C T 5530.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2245;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,205:209:99:5559,397,0
CP000253.1 2228928 . T G 4879.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.979;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.11;ReadPosRankSum=1.299;SOR=0.651 GT:AD:DP:GQ:PL 1/1:1,179:180:99:4908,355,0
CP000253.1 2229053 . G A 4544.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9244;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.58;SOR=1.088 GT:AD:DP:GQ:PL 1/1:0,159:160:99:4573,331,0
CP000253.1 2229109 . C G 4394.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=1.228 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4423,319,0
CP000253.1 2229165 . G T 4652.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7089;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4681,331,0
CP000253.1 2229170 . T A 4430.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.987;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.08;ReadPosRankSum=1.891;SOR=0.077 GT:AD:DP:GQ:PL 1/1:3,181:187:99:4459,322,0
CP000253.1 2229192 . G A 4577.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6765;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,181:186:99:4606,331,0
CP000253.1 2229199 . T A 4487.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.755;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1664;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.00;ReadPosRankSum=0.806;SOR=0.397 GT:AD:DP:GQ:PL 1/1:1,186:188:99:4516,325,0
CP000253.1 2229203 . T A 4534.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.792;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.65;ReadPosRankSum=1.431;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,183:187:99:4563,331,0
CP000253.1 2229218 . G T 4568.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9289;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4597,328,0
CP000253.1 2229227 . T A 4061.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.160;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3576;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.18;ReadPosRankSum=1.236;SOR=0.105 GT:AD:DP:GQ:PL 1/1:2,166:170:99:4090,298,0
CP000253.1 2229229 . T C 4293.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1122;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,167:170:99:4322,313,0
CP000253.1 2229230 . T C 4363.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,168:170:99:4392,319,0
CP000253.1 2229264 . G T 4510.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6447;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.63;ReadPosRankSum=1.142;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,175:176:99:4539,325,0
CP000253.1 2229275 . A T 4489.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8188;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4518,328,0
CP000253.1 2229284 . G A 4354.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8883;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,167:171:99:4383,325,0
CP000253.1 2229293 . T A 4177.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.983;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1826;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.17;ReadPosRankSum=1.401;SOR=0.221 GT:AD:DP:GQ:PL 1/1:3,163:167:99:4206,307,0
CP000253.1 2229294 . C G 4004.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7607;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4033,298,0
CP000253.1 2229368 . A T 4111.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.801;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.58;ReadPosRankSum=-1.409;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,138:139:99:4140,307,0
CP000253.1 2229371 . T C 4163.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.17;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,138:139:99:4192,310,0
CP000253.1 2229377 . G T 4202.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.033;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=30.24;ReadPosRankSum=1.134;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,138:139:99:4231,313,0
CP000253.1 2229380 . T A 3998.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4581;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.98;ReadPosRankSum=1.004;SOR=0.556 GT:AD:DP:GQ:PL 1/1:1,137:139:99:4027,295,0
CP000253.1 2229383 . G T 4182.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.918;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3526;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.67;ReadPosRankSum=-0.479;SOR=0.534 GT:AD:DP:GQ:PL 1/1:1,140:141:99:4211,310,0
CP000253.1 2229398 . T A 4611.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7567;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.19;SOR=1.108 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4640,340,0
CP000253.1 2229416 . C T 4558.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5324;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.99;SOR=1.091 GT:AD:DP:GQ:PL 1/1:0,152:153:99:4587,337,0
CP000253.1 2229422 . A T 3736.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3205;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.42;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3765,277,0
CP000253.1 2229423 . T G 3705.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.966;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3205;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.18;ReadPosRankSum=0.068;SOR=0.535 GT:AD:DP:GQ:PL 1/1:1,126:127:99:3734,277,0
CP000253.1 2229425 . G A 3727.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.12;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3756,280,0
CP000253.1 2229433 . C T 5243.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3390;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.81;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,182:182:99:5272,382,0
CP000253.1 2229476 . C A 5708.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.58;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5737,415,0
CP000253.1 2229482 . G A 5721.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.78;SOR=1.129 GT:AD:DP:GQ:PL 1/1:0,206:209:99:5750,421,0
CP000253.1 2229488 . C T 5867.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.68;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,212:212:99:5896,424,0
CP000253.1 2229491 . T A 5714.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3078;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.96;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,212:214:99:5743,415,0
CP000253.1 2229536 . T A 6138.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.751;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6736;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.06;ReadPosRankSum=0.050;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,244:245:99:6167,436,0
CP000253.1 2229575 . T A 6001.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6030,427,0
CP000253.1 2229605 . A C 6250.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.697;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.00;ReadPosRankSum=1.448;SOR=0.163 GT:AD:DP:GQ:PL 1/1:2,248:250:99:6279,448,0
CP000253.1 2229628 . T C 6266.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.4230;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.37;ReadPosRankSum=-1.213;SOR=0.301 GT:AD:DP:GQ:PL 1/1:1,246:248:99:6295,445,0
CP000253.1 2229703 . T C 6265.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.792;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1742;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;MQRankSum=0.000;QD=26.55;ReadPosRankSum=1.593;SOR=0.279 GT:AD:DP:GQ:PL 1/1:1,235:239:99:6294,451,0
CP000253.1 2229727 . G C 6378.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8790;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=26.91;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,237:238:99:6407,457,0
CP000253.1 2229761 . A G 6445.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.6320;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=27.31;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,236:237:99:6474,472,0
CP000253.1 2229800 . C T 6357.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4622;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=28.01;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,227:227:99:6386,457,0
CP000253.1 2229865 . A C 5917.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2837;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=27.02;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,219:219:99:5946,424,0
CP000253.1 2229869 . T A 5857.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9111;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.87;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,218:219:99:5886,424,0
CP000253.1 2229878 . A C 6015.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.480;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3806;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=10.747;QD=26.04;ReadPosRankSum=0.558;SOR=0.439 GT:AD:DP:GQ:PL 1/1:2,229:232:99:6044,433,0
CP000253.1 2229884 . C T 6380.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.862;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1029;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=-0.046;QD=27.27;ReadPosRankSum=2.167;SOR=0.451 GT:AD:DP:GQ:PL 1/1:2,232:234:99:6409,455,0
CP000253.1 2229889 . T G 6167.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3408;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=26.82;ReadPosRankSum=1.371;SOR=0.555 GT:AD:DP:GQ:PL 1/1:1,229:230:99:6196,445,0
CP000253.1 2229910 . C A 6156.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9103;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=27.12;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,227:227:99:6185,442,0
CP000253.1 2229922 . G C 5543.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.935;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4646;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=0.000;QD=27.18;ReadPosRankSum=0.968;SOR=0.531 GT:AD:DP:GQ:PL 1/1:1,203:204:99:5572,397,0
CP000253.1 2229923 . C T 5496.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.771;DP=204;Dels=0.00;ExcessHet=3.0103;FS=3.411;HaplotypeScore=16.3587;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=0.000;QD=26.94;ReadPosRankSum=0.951;SOR=0.531 GT:AD:DP:GQ:PL 1/1:1,203:204:99:5525,369,0
CP000253.1 2229924 . T G 5498.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.974;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1320;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=0.000;QD=26.95;ReadPosRankSum=-0.204;SOR=0.309 GT:AD:DP:GQ:PL 1/1:1,203:204:99:5527,397,0
CP000253.1 2229949 . C T 5628.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5978;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=26.68;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,211:211:99:5657,403,0
CP000253.1 2229950 . A T 5592.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7657;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=26.51;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,211:211:99:5621,397,0
CP000253.1 2229953 . T C 5371.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6312;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=25.58;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,210:212:99:5400,388,0
CP000253.1 2229970 . T C 5632.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.591;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4658;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=25.49;ReadPosRankSum=1.059;SOR=0.230 GT:AD:DP:GQ:PL 1/1:1,220:221:99:5661,404,0
CP000253.1 2229971 . T A 5527.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.764;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5326;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=0.160;SOR=0.234 GT:AD:DP:GQ:PL 1/1:1,215:219:99:5556,400,0
CP000253.1 2229998 . A C 5427.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6013;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=24.34;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,223:223:99:5456,397,0
CP000253.1 2230013 . T A 5551.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.35;ReadPosRankSum=1.488;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,218:219:99:5580,400,0
CP000253.1 2230016 . A T 5704.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,215:216:99:5733,406,0
CP000253.1 2230023 . T C 5756.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.691;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.05;ReadPosRankSum=1.889;SOR=0.759 GT:AD:DP:GQ:PL 1/1:2,219:222:99:5785,412,0
CP000253.1 2230031 . A T 5981.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.947;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.47;ReadPosRankSum=0.912;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,225:226:99:6010,424,0
CP000253.1 2230037 . G A 5762.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,224:224:99:5791,418,0
CP000253.1 2230049 . T A 5611.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.588;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.62;ReadPosRankSum=1.856;SOR=0.840 GT:AD:DP:GQ:PL 1/1:2,217:220:99:5640,406,0
CP000253.1 2230055 . C A 4986.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.608;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4970;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=1.284;SOR=0.123 GT:AD:DP:GQ:PL 1/1:2,198:201:99:5015,358,0
CP000253.1 2230058 . A T 5232.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,199:199:99:5261,376,0
CP000253.1 2230061 . G A 5239.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7590;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.33;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,199:199:99:5268,382,0
CP000253.1 2230064 . A C 5384.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0251;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,203:203:99:5413,388,0
CP000253.1 2230073 . T C 5751.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,220:220:99:5780,412,0
CP000253.1 2230082 . T G 5271.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.739;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.36;ReadPosRankSum=1.393;SOR=0.845 GT:AD:DP:GQ:PL 1/1:4,196:201:99:5300,382,0
CP000253.1 2230083 . G A 5285.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.962;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.30;ReadPosRankSum=-2.371;SOR=0.448 GT:AD:DP:GQ:PL 1/1:3,198:201:99:5314,384,0
CP000253.1 2230085 . G T 5503.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5086;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.11;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,203:203:99:5532,394,0
CP000253.1 2230103 . T G 5471.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.366;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.69;ReadPosRankSum=1.695;SOR=0.933 GT:AD:DP:GQ:PL 1/1:2,211:213:99:5500,400,0
CP000253.1 2230105 . T G 5502.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.898;DP=212;Dels=0.00;ExcessHet=3.0103;FS=3.658;HaplotypeScore=22.2681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.08;ReadPosRankSum=0.908;SOR=0.507 GT:AD:DP:GQ:PL 1/1:2,209:212:99:5531,402,0
CP000253.1 2230582 . C A 4946.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.598;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.76;ReadPosRankSum=0.090;SOR=0.351 GT:AD:DP:GQ:PL 1/1:1,191:194:99:4975,361,0
CP000253.1 2230586 . A T 4935.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.82;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4964,355,0
CP000253.1 2230640 . T C 5071.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2830;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,212:212:99:5100,361,0
CP000253.1 2230646 . T C 5087.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,210:211:99:5116,361,0
CP000253.1 2230778 . A G 5638.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,233:233:99:5667,400,0
CP000253.1 2230813 . T C 5108.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3517;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=1.018 GT:AD:DP:GQ:PL 1/1:0,217:217:99:5137,358,0
CP000253.1 2230817 . A G 5304.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=1.018 GT:AD:DP:GQ:PL 1/1:0,217:217:99:5333,370,0
CP000253.1 2230844 . A G 5100.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0130;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5129,358,0
CP000253.1 2231193 . T G 531.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:560,39,0
CP000253.1 2231272 . T C 577.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:606,42,0
CP000253.1 2231743 . A T 987.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1016,72,0
CP000253.1 2232178 . T C 3951.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.857;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.4388;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.52;ReadPosRankSum=1.702;SOR=0.228 GT:AD:DP:GQ:PL 1/1:1,167:168:99:3980,283,0
CP000253.1 2232229 . C T 3886.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8329;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3915,277,0
CP000253.1 2232352 . T C 2965.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=1.129 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2994,214,0
CP000253.1 2232786 . C G 249.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:278,21,0
CP000253.1 2232819 . C T 371.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:30:400,30,0
CP000253.1 2233202 . T C 2656.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4377;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.30;ReadPosRankSum=-0.891;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,104:105:99:2685,193,0
CP000253.1 2233601 . G A 6121.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8276;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,245:248:99:6150,433,0
CP000253.1 2233656 . G A 5612.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,224:226:99:5641,394,0
CP000253.1 2233781 . G A 5644.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.858;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9862;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.12;ReadPosRankSum=0.844;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,233:236:99:5673,400,0
CP000253.1 2235410 . C A 4264.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.258;DP=172;Dels=0.00;ExcessHet=3.0103;FS=3.434;HaplotypeScore=25.3967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.80;ReadPosRankSum=0.514;SOR=0.550 GT:AD:DP:GQ:PL 1/1:1,171:172:99:4293,274,0
CP000253.1 2235548 . G T 2981.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.587;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.30;ReadPosRankSum=1.300;SOR=0.248 GT:AD:DP:GQ:PL 1/1:1,127:128:99:3010,178,0
CP000253.1 2236053 . A T 253.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:282,21,0
CP000253.1 2236450 . C T 585.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:614,42,0
CP000253.1 2236756 . T A 499.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:39:528,39,0
CP000253.1 2239359 . T A 1163.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1261;MLEAC=2;MLEAF=1.00;MQ=41.89;MQ0=27;QD=15.31;SOR=0.818 GT:AD:DP:GQ:PL 1/1:26,50:76:84:1192,84,0
CP000253.1 2242061 . G T 14.68 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=2.53;MQ0=249;QD=0.06;SOR=1.609 GT:AD:DP:GQ:PL 1/1:151,97:250:3:41,3,0
CP000253.1 2246588 . G A 735.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:764,54,0
CP000253.1 2246706 . G A 350.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:379,27,0
CP000253.1 2246761 . A T 1348.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6124;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1377,96,0
CP000253.1 2246840 . C T 3154.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2831;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,131:132:99:3183,223,0
CP000253.1 2246864 . A G 3689.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3718,259,0
CP000253.1 2246903 . C T 3693.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2163;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3722,259,0
CP000253.1 2246915 . C T 3828.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.005;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.93;ReadPosRankSum=1.733;SOR=0.575 GT:AD:DP:GQ:PL 1/1:1,159:160:99:3857,265,0
CP000253.1 2246918 . A G 3762.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4355;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.37;ReadPosRankSum=1.711;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,160:161:99:3791,265,0
CP000253.1 2246935 . G C 3753.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1092;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,163:163:99:3782,262,0
CP000253.1 2246938 . T A 3899.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1366;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,164:166:99:3928,274,0
CP000253.1 2246966 . A T 4169.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8050;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,182:183:99:4198,289,0
CP000253.1 2247011 . T G 3780.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.297;DP=175;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.11;ReadPosRankSum=0.007;SOR=0.118 GT:AD:DP:GQ:PL 1/1:2,169:173:99:3809,268,0
CP000253.1 2247149 . A T 2881.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6011;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,120:121:99:2910,205,0
CP000253.1 2247335 . G A 1018.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1047,72,0
CP000253.1 2247517 . G A 404.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:433,30,0
CP000253.1 2247527 . G T 355.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:16:27:384,27,0
CP000253.1 2247553 . A G 437.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:33:466,33,0
CP000253.1 2247665 . G T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2247896 . C A 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 2247902 . G A 319.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:348,24,0
CP000253.1 2247905 . C T 316.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:345,24,0
CP000253.1 2247907 . G A 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 2247914 . A G 280.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:309,21,0
CP000253.1 2247917 . A G 363.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:392,27,0
CP000253.1 2248603 . C T 1335.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:58:93:1364,93,0
CP000253.1 2248716 . G A 340.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.40;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:27:369,27,0
CP000253.1 2248918 . A C 1038.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.78;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:51:75:1067,75,0
CP000253.1 2249053 . C T 788.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:60:817,60,0
CP000253.1 2249266 . T C 1997.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,86:88:99:2026,138,0
CP000253.1 2249269 . C T 2096.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9539;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:92:99:2125,147,0
CP000253.1 2249521 . G T 218.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:247,18,0
CP000253.1 2249566 . G A 52.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0
CP000253.1 2249901 . T C 101.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:129,9,0
CP000253.1 2250765 . A C 1296.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:96:1325,96,0
CP000253.1 2250786 . C T 1507.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.00;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1536,108,0
CP000253.1 2251054 . C T 2504.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1755;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.77;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2533,175,0
CP000253.1 2251991 . T C 2819.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3483;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2848,202,0
CP000253.1 2252029 . T C 3168.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8035;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:131:99:3197,226,0
CP000253.1 2252305 . G A 2913.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2942,205,0
CP000253.1 2252525 . A G 664.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:693,48,0
CP000253.1 2252528 . G A 709.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:738,51,0
CP000253.1 2252744 . G A 383.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:412,30,0
CP000253.1 2252865 . C T 728.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:57:757,57,0
CP000253.1 2253269 . T C 2989.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3018,214,0
CP000253.1 2253356 . T A 3478.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7708;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3507,247,0
CP000253.1 2254136 . C T 1412.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1441,105,0
CP000253.1 2254189 . A G 1247.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=1.251 GT:AD:DP:GQ:PL 1/1:0,47:47:90:1276,90,0
CP000253.1 2254416 . T A 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 2254569 . A T 882.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,35:37:66:911,66,0
CP000253.1 2254778 . A G 1225.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:87:1254,87,0
CP000253.1 2255139 . T A 1665.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1694,117,0
CP000253.1 2255164 . G A 1719.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1748,120,0
CP000253.1 2255178 . C T 1713.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1742,120,0
CP000253.1 2255268 . A T 1800.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1829,126,0
CP000253.1 2255534 . A C 1067.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.42;ReadPosRankSum=-0.991;SOR=0.613 GT:AD:DP:GQ:PL 1/1:1,41:42:78:1096,78,0
CP000253.1 2255540 . C A 1073.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1102,78,0
CP000253.1 2255546 . T A 1027.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:40:75:1056,75,0
CP000253.1 2255555 . A G 1027.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1056,75,0
CP000253.1 2255564 . T A 1038.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1067,75,0
CP000253.1 2255567 . A G 1040.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.69;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1069,75,0
CP000253.1 2255750 . T C 1002.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:72:1031,72,0
CP000253.1 2255807 . G A 1489.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1518,108,0
CP000253.1 2255819 . T A 1726.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1755,123,0
CP000253.1 2255878 . G A 2108.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6282;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2137,147,0
CP000253.1 2255978 . G A 2163.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.159;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.78;ReadPosRankSum=-1.422;SOR=0.715 GT:AD:DP:GQ:PL 1/1:2,89:92:99:2192,115,0
CP000253.1 2256130 . C A 2101.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,86:87:99:2130,147,0
CP000253.1 2257168 . T C 1352.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.18;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:93:1381,93,0
CP000253.1 2257873 . C A 188.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:217,15,0
CP000253.1 2257895 . G T 129.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:157,12,0
CP000253.1 2258855 . G A 1134.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5165;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1163,81,0
CP000253.1 2258879 . C T 665.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:694,48,0
CP000253.1 2259119 . G A 1186.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:52:84:1215,84,0
CP000253.1 2259416 . A T 1885.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1914,132,0
CP000253.1 2260106 . G A 2499.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2528,178,0
CP000253.1 2260238 . A G 1633.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=1.033 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1662,117,0
CP000253.1 2260322 . C T 523.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:39:552,39,0
CP000253.1 2260352 . C T 631.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:48:660,48,0
CP000253.1 2260469 . T C 602.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:45:631,45,0
CP000253.1 2260857 . T C 639.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:25:48:668,48,0
CP000253.1 2261060 . A G 533.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:562,39,0
CP000253.1 2261330 . A T 847.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:876,63,0
CP000253.1 2261383 . A G 971.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:69:1000,69,0
CP000253.1 2262157 . G A 2253.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=1.347 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2282,163,0
CP000253.1 2262691 . C T 788.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:57:817,57,0
CP000253.1 2262739 . C T 701.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:51:730,51,0
CP000253.1 2262784 . A G 711.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.38;SOR=1.697 GT:AD:DP:GQ:PL 1/1:0,26:26:54:740,54,0
CP000253.1 2262832 . G C 1047.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1076,75,0
CP000253.1 2262865 . T A 1770.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1799,126,0
CP000253.1 2262915 . T C 2646.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6744;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,108:110:99:2675,187,0
CP000253.1 2262964 . T C 3252.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3281,229,0
CP000253.1 2263051 . G A 3344.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5934;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,137:139:99:3373,235,0
CP000253.1 2263206 . C T 3563.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.884;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3179;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.20;ReadPosRankSum=-1.402;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,135:136:99:3592,253,0
CP000253.1 2263258 . T C 3870.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7302;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3899,271,0
CP000253.1 2263292 . T A 4624.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,192:192:99:4653,325,0
CP000253.1 2263415 . G A 6064.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.1698;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6093,427,0
CP000253.1 2263599 . T G 6042.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.775;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.77;ReadPosRankSum=1.052;SOR=0.342 GT:AD:DP:GQ:PL 1/1:1,243:245:99:6071,427,0
CP000253.1 2263957 . C T 55.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:83,6,0
CP000253.1 2263982 . G A 38.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:66,6,0
CP000253.1 2263983 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.20;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:3:45,3,0
CP000253.1 2265061 . G T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2265073 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2265076 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2265131 . T G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=50.99;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2265340 . A C 902.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.09;MQ0=0;QD=21.49;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:63:931,63,0
CP000253.1 2265407 . G A 773.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.38;MQ0=0;QD=21.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:54:802,54,0
CP000253.1 2265436 . G A 549.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=50.82;MQ0=0;QD=19.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:39:578,39,0
CP000253.1 2265659 . A T 81.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=22.19;MQ0=1;QD=11.61;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,7:7:9:109,9,0
CP000253.1 2265668 . A G 82.28 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=25.11;MQ0=1;QD=10.29;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,8:8:9:110,9,0
CP000253.1 2265680 . T C 118.03 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=23.32;MQ0=1;QD=13.11;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,9:9:12:146,12,0
CP000253.1 2265693 . T G 237.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=30.05;MQ0=1;QD=18.29;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,13:13:21:266,21,0
CP000253.1 2265707 . A G 268.78 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3983;MLEAC=2;MLEAF=1.00;MQ=30.92;MQ0=1;QD=14.15;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,19:19:24:297,24,0
CP000253.1 2265710 . T A 336.78 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.1445;MLEAC=2;MLEAF=1.00;MQ=34.75;MQ0=1;QD=16.04;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,21:21:27:365,27,0
CP000253.1 2265781 . T C 1051.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2139;MLEAC=2;MLEAF=1.00;MQ=46.92;MQ0=1;QD=18.78;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,56:58:75:1080,75,0
CP000253.1 2265853 . C T 1130.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=46.52;MQ0=3;QD=18.24;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,62:62:78:1159,78,0
CP000253.1 2265917 . A T 1074.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=46.70;MQ0=5;QD=17.91;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,60:60:75:1103,75,0
CP000253.1 2266133 . G A 145.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:173,12,0
CP000253.1 2266160 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2266181 . G A 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 2266205 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2266295 . G A 1415.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,53:54:99:1444,102,0
CP000253.1 2266358 . A G 2613.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8567;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2642,181,0
CP000253.1 2266361 . G A 2599.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6415;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;MQRankSum=10.817;QD=22.41;ReadPosRankSum=1.061;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,115:116:99:2628,181,0
CP000253.1 2266364 . G T 2532.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.685;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4249;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;MQRankSum=10.817;QD=21.83;ReadPosRankSum=1.031;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,115:116:99:2561,150,0
CP000253.1 2266412 . A G 3692.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7820;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=22.66;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,163:164:99:3721,253,0
CP000253.1 2266478 . T A 3540.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,157:158:99:3569,244,0
CP000253.1 2266487 . G A 3555.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.50;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3584,244,0
CP000253.1 2266505 . C T 3478.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.16;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3507,238,0
CP000253.1 2267716 . C A 610.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:45:639,45,0
CP000253.1 2267722 . C T 494.53 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.644;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.02;ReadPosRankSum=2.360;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,24:26:3:521,0,3
CP000253.1 2267731 . C T 580.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:609,42,0
CP000253.1 2267742 . T A 620.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:649,45,0
CP000253.1 2267812 . T C 1029.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:43:75:1058,75,0
CP000253.1 2267833 . A G 1233.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7804;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1262,90,0
CP000253.1 2267842 . G A 1160.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:48:84:1189,84,0
CP000253.1 2267908 . A T 1543.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.481;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.04;ReadPosRankSum=1.899;SOR=1.000 GT:AD:DP:GQ:PL 1/1:2,65:67:76:1572,76,0
CP000253.1 2268010 . C T 1806.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1835,129,0
CP000253.1 2268013 . A G 1819.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2112;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,76:78:99:1848,132,0
CP000253.1 2268028 . C T 2161.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2190,154,0
CP000253.1 2268052 . A T 2263.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1294;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2292,160,0
CP000253.1 2268286 . A G 1714.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.816;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.82;ReadPosRankSum=-0.385;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,71:72:99:1743,123,0
CP000253.1 2268291 . T A 1698.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1727,120,0
CP000253.1 2268298 . G A 1743.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1750;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1772,123,0
CP000253.1 2268346 . C T 1506.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1535,108,0
CP000253.1 2268367 . T A 1572.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1601,111,0
CP000253.1 2268739 . T A 2650.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,110:114:99:2679,187,0
CP000253.1 2269105 . C T 404.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:433,30,0
CP000253.1 2269402 . C T 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 2269522 . T C 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2269622 . G A 537.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:566,39,0
CP000253.1 2269843 . G A 355.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:27:384,27,0
CP000253.1 2270047 . G C 2218.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9089;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=1.204 GT:AD:DP:GQ:PL 1/1:0,89:91:99:2247,160,0
CP000253.1 2270050 . A G 2237.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,90:91:99:2266,160,0
CP000253.1 2270053 . C T 2208.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0095;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2237,160,0
CP000253.1 2270056 . C A 2280.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1154;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2309,163,0
CP000253.1 2270060 . T A 2296.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2325,166,0
CP000253.1 2270062 . G A 2277.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2306,163,0
CP000253.1 2270070 . C A 2218.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.159;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.38;ReadPosRankSum=-0.189;SOR=0.991 GT:AD:DP:GQ:PL 1/1:3,88:91:99:2247,160,0
CP000253.1 2270077 . C A 2306.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2335,166,0
CP000253.1 2270078 . G T 2321.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6623;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2350,166,0
CP000253.1 2270079 . T G 2207.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2236,159,0
CP000253.1 2270080 . A T 2191.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.09;ReadPosRankSum=-1.676;SOR=0.409 GT:AD:DP:GQ:PL 1/1:1,90:91:99:2220,157,0
CP000253.1 2270173 . T C 3001.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3030,211,0
CP000253.1 2270346 . C T 1799.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1828,129,0
CP000253.1 2270353 . T A 1731.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1760,129,0
CP000253.1 2270359 . C T 1730.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4050;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1759,126,0
CP000253.1 2270386 . G A 1229.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:90:1258,90,0
CP000253.1 2270482 . C T 528.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:557,39,0
CP000253.1 2270567 . T C 218.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:247,18,0
CP000253.1 2270630 . A C 211.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.35;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:240,18,0
CP000253.1 2270656 . G A 128.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:156,12,0
CP000253.1 2270669 . A G 108.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:136,12,0
CP000253.1 2270683 . A G 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 2270697 . G A 166.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:15:195,15,0
CP000253.1 2270871 . A G 2291.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2320,163,0
CP000253.1 2270916 . C T 3194.83 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=1.027 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3223,226,0
CP000253.1 2270979 . G T 3642.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.965;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6012;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=1.163;SOR=0.756 GT:AD:DP:GQ:PL 1/1:1,145:146:99:3671,256,0
CP000253.1 2271012 . A G 3622.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8259;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,145:147:99:3651,259,0
CP000253.1 2271069 . T A 3889.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,156:157:99:3918,274,0
CP000253.1 2271797 . G T 1016.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1045,72,0
CP000253.1 2271884 . C G 654.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.28;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:48:683,48,0
CP000253.1 2271885 . C T 653.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:48:682,48,0
CP000253.1 2271900 . A G 486.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:515,36,0
CP000253.1 2271904 . T A 506.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:39:535,39,0
CP000253.1 2271913 . T A 486.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:515,36,0
CP000253.1 2272212 . C T 3211.76 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3240,229,0
CP000253.1 2272252 . A G 3863.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.7043;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=24.93;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,155:161:99:3892,277,0
CP000253.1 2272822 . A G 4729.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.891;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.67;ReadPosRankSum=0.431;SOR=0.759 GT:AD:DP:GQ:PL 1/1:1,164:166:99:4758,343,0
CP000253.1 2273081 . G A 258.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.76;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:21:287,21,0
CP000253.1 2273083 . A T 212.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.593;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.65;ReadPosRankSum=0.000;SOR=0.859 GT:AD:DP:GQ:PL 1/1:1,8:9:18:241,18,0
CP000253.1 2273333 . A T 1234.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1263,87,0
CP000253.1 2273461 . A G 652.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:31:48:681,48,0
CP000253.1 2273662 . A G 2340.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2369,166,0
CP000253.1 2273743 . G A 2551.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7637;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2580,181,0
CP000253.1 2273943 . T G 2662.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2691,190,0
CP000253.1 2273944 . G A 2672.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2701,190,0
CP000253.1 2273947 . T G 2682.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5140;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2711,193,0
CP000253.1 2273977 . A T 2772.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2801,196,0
CP000253.1 2273986 . C A 2686.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.770;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0701;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.99;ReadPosRankSum=0.928;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,111:113:99:2715,173,0
CP000253.1 2273995 . G A 2743.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4830;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,116:117:99:2772,196,0
CP000253.1 2273998 . A G 2729.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7996;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,112:115:99:2758,193,0
CP000253.1 2274013 . T A 2623.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2995;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2652,187,0
CP000253.1 2274334 . A T 5010.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3244;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,200:201:99:5039,352,0
CP000253.1 2274352 . T A 4913.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5707;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,191:191:99:4942,346,0
CP000253.1 2274454 . T C 3651.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3680,262,0
CP000253.1 2274472 . T A 3361.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.707;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.28;ReadPosRankSum=-0.430;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,132:133:99:3390,244,0
CP000253.1 2274475 . G A 3367.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,130:133:99:3396,241,0
CP000253.1 2274490 . C T 3254.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1562;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,131:133:99:3283,235,0
CP000253.1 2274630 . A G 3170.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4022;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3199,226,0
CP000253.1 2274783 . A G 2680.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7432;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2709,193,0
CP000253.1 2274798 . C T 2680.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.875;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4297;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.53;ReadPosRankSum=1.502;SOR=0.472 GT:AD:DP:GQ:PL 1/1:1,104:105:99:2709,193,0
CP000253.1 2274843 . A G 2397.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.910;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.24;ReadPosRankSum=0.931;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2426,172,0
CP000253.1 2274932 . C A 1933.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1962,135,0
CP000253.1 2275188 . C T 2433.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2462,178,0
CP000253.1 2275437 . T A 3359.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.769;DP=140;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.52;ReadPosRankSum=1.467;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,136:139:99:3388,247,0
CP000253.1 2275557 . A T 4523.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8134;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4552,322,0
CP000253.1 2275563 . C T 4502.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0569;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,181:183:99:4531,319,0
CP000253.1 2275575 . A T 4773.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4802,337,0
CP000253.1 2275866 . G A 4015.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4044,283,0
CP000253.1 2276131 . C A 1930.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.000;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4217;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.75;ReadPosRankSum=1.733;SOR=0.347 GT:AD:DP:GQ:PL 1/1:1,77:78:99:1959,138,0
CP000253.1 2276148 . A G 1837.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8364;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1866,132,0
CP000253.1 2276372 . A G 1068.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:78:1097,78,0
CP000253.1 2276432 . C T 2038.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2067,147,0
CP000253.1 2276462 . C A 2411.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.579;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=0.165;SOR=0.602 GT:AD:DP:GQ:PL 1/1:2,95:97:99:2440,175,0
CP000253.1 2276491 . G A 2363.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,99:101:99:2392,169,0
CP000253.1 2276531 . T C 2401.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2430,172,0
CP000253.1 2276633 . A T 2066.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9054;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2095,147,0
CP000253.1 2276798 . C A 3276.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.882 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3305,235,0
CP000253.1 2276978 . T C 6050.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7015;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,239:240:99:6079,427,0
CP000253.1 2277017 . G A 6147.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.9008;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6176,436,0
CP000253.1 2277134 . A G 6347.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.965;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3074;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.80;ReadPosRankSum=1.599;SOR=0.315 GT:AD:DP:GQ:PL 1/1:1,245:247:99:6376,451,0
CP000253.1 2277140 . T A 6111.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.011;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1237;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.15;ReadPosRankSum=1.732;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,242:243:99:6140,433,0
CP000253.1 2277146 . A G 5987.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5647;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,237:237:99:6016,424,0
CP000253.1 2277257 . G A 5623.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7015;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,227:228:99:5652,400,0
CP000253.1 2277320 . G A 5302.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4160;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.49;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,208:210:99:5331,376,0
CP000253.1 2277332 . T A 5162.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.641;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6448;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=10.174;QD=24.94;ReadPosRankSum=0.463;SOR=0.134 GT:AD:DP:GQ:PL 1/1:2,205:208:99:5191,367,0
CP000253.1 2277350 . A T 5163.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1254;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.19;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,205:206:99:5192,364,0
CP000253.1 2277353 . T C 5183.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.819;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8925;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=14.457;QD=24.92;ReadPosRankSum=0.591;SOR=0.288 GT:AD:DP:GQ:PL 1/1:1,207:209:99:5212,367,0
CP000253.1 2277383 . T A 4839.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.531;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1211;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=-0.051;QD=24.69;ReadPosRankSum=-0.476;SOR=0.870 GT:AD:DP:GQ:PL 1/1:2,194:198:99:4868,343,0
CP000253.1 2277386 . A T 4821.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4320;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=14.071;QD=24.48;ReadPosRankSum=-0.633;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,196:198:99:4850,343,0
CP000253.1 2277398 . A G 4725.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1354;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=24.49;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,193:193:99:4754,334,0
CP000253.1 2277404 . A T 4453.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4754;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=24.61;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4482,316,0
CP000253.1 2277425 . T C 4358.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1070;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;MQRankSum=0.000;QD=24.63;ReadPosRankSum=1.380;SOR=0.319 GT:AD:DP:GQ:PL 1/1:1,176:177:99:4387,310,0
CP000253.1 2277452 . T C 3509.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0070;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=0.000;QD=24.72;ReadPosRankSum=-0.268;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,141:144:99:3538,256,0
CP000253.1 2277479 . T G 2989.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.580;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9441;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=0.000;QD=24.71;ReadPosRankSum=-1.729;SOR=0.148 GT:AD:DP:GQ:PL 1/1:2,119:122:99:3018,217,0
CP000253.1 2277488 . T C 2964.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3273;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=24.91;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2993,214,0
CP000253.1 2277494 . A C 2792.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9630;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=24.71;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2821,202,0
CP000253.1 2277506 . T A 2827.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7572;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=24.80;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2856,202,0
CP000253.1 2277515 . G T 2838.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4440;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=25.12;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2867,205,0
CP000253.1 2277569 . G A 2285.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2314,163,0
CP000253.1 2277605 . C A 1755.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.826;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.60;ReadPosRankSum=-1.366;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,65:66:99:1784,129,0
CP000253.1 2277618 . T A 1638.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.25;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1667,120,0
CP000253.1 2277653 . A T 1345.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.04;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1374,99,0
CP000253.1 2277680 . A T 1592.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.988;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0577;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.46;ReadPosRankSum=-0.181;SOR=0.389 GT:AD:DP:GQ:PL 1/1:1,57:58:99:1621,117,0
CP000253.1 2277698 . T C 1752.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.39;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1781,129,0
CP000253.1 2277722 . G A 2345.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2374,169,0
CP000253.1 2277758 . A G 2391.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4544;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2420,172,0
CP000253.1 2277818 . A G 2468.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.20;ReadPosRankSum=1.734;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,101:102:99:2497,175,0
CP000253.1 2277819 . C T 2430.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0083;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,99:101:99:2459,175,0
CP000253.1 2278016 . A T 3307.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,127:130:99:3336,238,0
CP000253.1 2278064 . A G 3295.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8345;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.75;ReadPosRankSum=1.165;SOR=0.401 GT:AD:DP:GQ:PL 1/1:1,127:128:99:3324,238,0
CP000253.1 2278067 . T C 3040.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.545;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.13;ReadPosRankSum=0.498;SOR=0.828 GT:AD:DP:GQ:PL 1/1:2,124:128:99:3069,181,0
CP000253.1 2278106 . G A 2795.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6075;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,116:117:99:2824,202,0
CP000253.1 2278403 . A G 2566.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2595,187,0
CP000253.1 2278508 . G A 2753.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.807;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.26;ReadPosRankSum=1.558;SOR=0.282 GT:AD:DP:GQ:PL 1/1:1,108:110:99:2782,199,0
CP000253.1 2278693 . G C 3479.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1068;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3508,247,0
CP000253.1 2278706 . A G 3665.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3694,262,0
CP000253.1 2278763 . G A 4359.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.031;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.65;ReadPosRankSum=1.830;SOR=1.080 GT:AD:DP:GQ:PL 1/1:2,168:171:99:4388,274,0
CP000253.1 2278799 . G A 4910.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2180;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=1.041 GT:AD:DP:GQ:PL 1/1:0,191:192:99:4939,352,0
CP000253.1 2278970 . G A 6330.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.8079;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6359,454,0
CP000253.1 2279571 . G A 520.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:549,39,0
CP000253.1 2279590 . G C 383.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:412,30,0
CP000253.1 2279681 . A C 302.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:331,24,0
CP000253.1 2279696 . G A 434.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:33:463,33,0
CP000253.1 2279723 . A C 581.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:610,42,0
CP000253.1 2279781 . G T 579.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:42:608,42,0
CP000253.1 2279791 . G T 575.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:42:604,42,0
CP000253.1 2279814 . G A 574.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:603,42,0
CP000253.1 2280062 . G A 2904.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.577;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3536;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.81;ReadPosRankSum=1.171;SOR=0.950 GT:AD:DP:GQ:PL 1/1:2,120:123:99:2933,208,0
CP000253.1 2280168 . G A 4383.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.9578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,188:191:99:4412,307,0
CP000253.1 2280345 . T C 3332.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.658;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.98;ReadPosRankSum=0.411;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,138:139:99:3361,238,0
CP000253.1 2280393 . T C 2962.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6990;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.93;SOR=1.274 GT:AD:DP:GQ:PL 1/1:0,110:111:99:2991,217,0
CP000253.1 2280394 . T C 2862.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.891;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6990;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.03;ReadPosRankSum=0.993;SOR=0.457 GT:AD:DP:GQ:PL 1/1:1,109:111:99:2891,208,0
CP000253.1 2280403 . A T 2800.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8267;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.93;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2829,205,0
CP000253.1 2280407 . G T 2332.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.848;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.92;ReadPosRankSum=1.694;SOR=0.786 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2361,169,0
CP000253.1 2280414 . T A 2306.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.63;ReadPosRankSum=0.231;SOR=0.786 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2335,166,0
CP000253.1 2280426 . G A 2070.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=1.065 GT:AD:DP:GQ:PL 1/1:0,86:87:99:2099,153,0
CP000253.1 2280444 . C T 1833.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1862,132,0
CP000253.1 2280507 . C G 1971.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2000,138,0
CP000253.1 2280510 . T C 1979.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.758;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.76;ReadPosRankSum=0.939;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,86:87:99:2008,141,0
CP000253.1 2280522 . T C 1973.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6081;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2002,138,0
CP000253.1 2280853 . T C 351.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:380,27,0
CP000253.1 2280896 . A T 469.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.63;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:498,36,0
CP000253.1 2280897 . C T 477.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.10;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:506,36,0
CP000253.1 2280902 . A G 449.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:478,36,0
CP000253.1 2280904 . C A 470.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:499,36,0
CP000253.1 2280919 . C T 572.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.15;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:45:601,45,0
CP000253.1 2280960 . T C 1763.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0779;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.00;SOR=1.573 GT:AD:DP:GQ:PL 1/1:0,63:65:99:1792,129,0
CP000253.1 2281044 . G A 2577.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.853;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.09;ReadPosRankSum=1.558;SOR=0.531 GT:AD:DP:GQ:PL 1/1:1,106:109:99:2606,181,0
CP000253.1 2281122 . C T 4006.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,164:165:99:4035,280,0
CP000253.1 2281142 . T A 4003.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.696;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.01;ReadPosRankSum=-0.100;SOR=0.268 GT:AD:DP:GQ:PL 1/1:1,173:174:99:4032,280,0
CP000253.1 2281146 . C T 4560.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,192:192:99:4589,319,0
CP000253.1 2281295 . T C 4446.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4088;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=24.43;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4475,313,0
CP000253.1 2281636 . T G 2011.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.87;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2040,141,0
CP000253.1 2281655 . A G 1951.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1915;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1980,138,0
CP000253.1 2281657 . G A 2014.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.827;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5093;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.27;ReadPosRankSum=1.401;SOR=0.287 GT:AD:DP:GQ:PL 1/1:1,82:83:99:2043,141,0
CP000253.1 2281658 . G A 2030.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.852;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=1.380;SOR=0.287 GT:AD:DP:GQ:PL 1/1:1,82:83:99:2059,144,0
CP000253.1 2281659 . T C 2035.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.956;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.53;ReadPosRankSum=-1.130;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,82:83:99:2064,144,0
CP000253.1 2281665 . A G 2038.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2461;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2067,144,0
CP000253.1 2281826 . G A 1012.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,40:42:75:1041,75,0
CP000253.1 2282997 . A G 98.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:126,9,0
CP000253.1 2283005 . T C 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2283012 . A T 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 2283013 . T C 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2283037 . T A 145.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:173,12,0
CP000253.1 2283067 . A C 161.90 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.593;DP=9;Dels=0.00;ExcessHet=3.0103;FS=3.522;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.99;ReadPosRankSum=1.221;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,8:9:15:190,15,0
CP000253.1 2283101 . T C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2283113 . G T 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 2283297 . T C 2800.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=1.232 GT:AD:DP:GQ:PL 1/1:0,108:109:99:2829,205,0
CP000253.1 2284048 . T G 659.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:48:688,48,0
CP000253.1 2284091 . A G 570.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:24:42:599,42,0
CP000253.1 2284148 . G T 488.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:517,36,0
CP000253.1 2284232 . C T 557.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:42:586,42,0
CP000253.1 2284244 . C T 551.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:42:580,42,0
CP000253.1 2284266 . C T 573.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:42:602,42,0
CP000253.1 2284269 . G A 623.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:45:652,45,0
CP000253.1 2284386 . T G 560.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:589,42,0
CP000253.1 2284491 . G A 446.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:475,33,0
CP000253.1 2284497 . T G 432.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:461,33,0
CP000253.1 2284499 . G A 356.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:385,27,0
CP000253.1 2284515 . C T 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 2284527 . T C 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 2284534 . C T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2284683 . G A 220.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:249,18,0
CP000253.1 2284695 . A T 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 2284715 . G A 296.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:325,24,0
CP000253.1 2284737 . T C 300.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:24:329,24,0
CP000253.1 2284814 . A T 424.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:33:453,33,0
CP000253.1 2284836 . A T 909.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:66:938,66,0
CP000253.1 2284841 . C A 1025.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1054,75,0
CP000253.1 2284853 . G A 1083.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:42:81:1112,81,0
CP000253.1 2284859 . C T 1454.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=1.047 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1483,105,0
CP000253.1 2284891 . A G 3006.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.992;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4260;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.70;ReadPosRankSum=-0.712;SOR=0.866 GT:AD:DP:GQ:PL 1/1:1,116:117:99:3035,214,0
CP000253.1 2284970 . G A 4662.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,193:193:99:4691,328,0
CP000253.1 2285029 . A G 4980.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9198;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.83;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,209:209:99:5009,346,0
CP000253.1 2285045 . C T 4506.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.731;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4690;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=-0.051;QD=23.11;ReadPosRankSum=-1.297;SOR=0.287 GT:AD:DP:GQ:PL 1/1:1,194:198:99:4535,316,0
CP000253.1 2285047 . G A 4572.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3496;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=23.57;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,194:194:99:4601,319,0
CP000253.1 2285050 . C T 4665.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3412;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=24.05;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,194:194:99:4694,325,0
CP000253.1 2285059 . T C 4658.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0275;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=23.77;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,196:196:99:4687,325,0
CP000253.1 2285083 . T G 3895.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.996;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7432;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;MQRankSum=-0.057;QD=25.30;ReadPosRankSum=1.620;SOR=0.314 GT:AD:DP:GQ:PL 1/1:1,153:154:99:3924,274,0
CP000253.1 2285087 . C G 3662.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.924;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1849;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;MQRankSum=-0.059;QD=24.92;ReadPosRankSum=0.365;SOR=0.311 GT:AD:DP:GQ:PL 1/1:1,146:149:99:3691,259,0
CP000253.1 2285088 . C A 3646.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0170;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;MQRankSum=-0.058;QD=24.47;ReadPosRankSum=0.419;SOR=0.310 GT:AD:DP:GQ:PL 1/1:1,148:149:99:3675,236,0
CP000253.1 2285089 . A C 3645.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.441;DP=149;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1061;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;MQRankSum=-0.125;QD=24.63;ReadPosRankSum=-0.623;SOR=0.901 GT:AD:DP:GQ:PL 1/1:2,146:148:99:3674,261,0
CP000253.1 2285091 . A C 3659.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.388;DP=149;Dels=0.01;ExcessHet=3.0103;FS=3.522;HaplotypeScore=22.1236;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;MQRankSum=-0.125;QD=24.73;ReadPosRankSum=-1.612;SOR=0.504 GT:AD:DP:GQ:PL 1/1:2,146:148:99:3688,261,0
CP000253.1 2285092 . T A 3698.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1052;MLEAC=2;MLEAF=1.00;MQ=59.90;MQ0=0;QD=24.99;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3727,262,0
CP000253.1 2285116 . A G 3726.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4543;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=25.18;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3755,268,0
CP000253.1 2285128 . G A 251.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=32.16;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0
CP000253.1 2285129 . A G 239.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=34.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:268,21,0
CP000253.1 2285130 . C A 250.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=28.40;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:279,21,0
CP000253.1 2285134 . T A 211.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=30.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:18:240,18,0
CP000253.1 2285146 . A C 252.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=31.52;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:281,21,0
CP000253.1 2285164 . T A 248.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=23.62;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:277,21,0
CP000253.1 2285169 . A C 246.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=31.25;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:275,21,0
CP000253.1 2285170 . A T 248.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=26.47;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:277,21,0
CP000253.1 2285187 . C T 254.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=24.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:283,21,0
CP000253.1 2285189 . G C 254.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=33.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:283,21,0
CP000253.1 2285193 . C A 253.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=29.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:282,21,0
CP000253.1 2285194 . C G 254.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=26.34;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:283,21,0
CP000253.1 2285195 . C A 255.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=31.51;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:284,21,0
CP000253.1 2285198 . G T 247.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=33.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:276,21,0
CP000253.1 2285206 . T G 251.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=28.22;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0
CP000253.1 2285210 . T G 251.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=27.48;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0
CP000253.1 2285212 . T G 241.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.80;MQ0=0;QD=34.54;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:270,21,0
CP000253.1 2285213 . C G 296.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.30;MQ0=0;QD=32.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:24:325,24,0
CP000253.1 2285264 . A C 2610.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0645;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=24.40;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2639,190,0
CP000253.1 2285362 . A T 835.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.96;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,31:31:63:864,63,0
CP000253.1 2285377 . A G 503.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,19:19:39:532,39,0
CP000253.1 2285379 . G C 498.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.71;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,18:19:39:527,39,0
CP000253.1 2285397 . C T 291.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.42;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:24:320,24,0
CP000253.1 2285403 . G C 272.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.31;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:24:301,24,0
CP000253.1 2285404 . C A 294.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.75;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:24:323,24,0
CP000253.1 2285410 . T A 280.78 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.20;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:24:309,24,0
CP000253.1 2285416 . C T 244.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.60;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:9:21:273,21,0
CP000253.1 2285451 . A G 874.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:63:903,63,0
CP000253.1 2285543 . G A 887.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:63:916,63,0
CP000253.1 2285545 . T A 867.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.25;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:63:896,63,0
CP000253.1 2285551 . C T 847.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.74;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:60:876,60,0
CP000253.1 2285552 . A G 888.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:63:917,63,0
CP000253.1 2285583 . T C 892.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.053;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.26;ReadPosRankSum=-1.627;SOR=0.793 GT:AD:DP:GQ:PL 1/1:2,40:42:24:921,24,0
CP000253.1 2285600 . C T 922.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:42:66:951,66,0
CP000253.1 2285612 . T G 879.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9992;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:63:908,63,0
CP000253.1 2285617 . G A 932.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:961,66,0
CP000253.1 2285620 . G A 889.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:63:918,63,0
CP000253.1 2285633 . T A 812.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:57:841,57,0
CP000253.1 2285668 . G T 499.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7460;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:528,36,0
CP000253.1 2285671 . T A 490.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.988;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7460;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.37;ReadPosRankSum=-0.415;SOR=0.849 GT:AD:DP:GQ:PL 1/1:1,20:21:36:519,36,0
CP000253.1 2285721 . G A 829.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:60:858,60,0
CP000253.1 2285752 . C T 915.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:66:944,66,0
CP000253.1 2285755 . T A 904.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:66:933,66,0
CP000253.1 2285758 . C T 908.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:66:937,66,0
CP000253.1 2285761 . T C 907.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:66:936,66,0
CP000253.1 2285764 . T C 872.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:35:63:901,63,0
CP000253.1 2285768 . C A 961.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:69:990,69,0
CP000253.1 2285773 . C T 955.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.991;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3346;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.83;ReadPosRankSum=1.690;SOR=0.574 GT:AD:DP:GQ:PL 1/1:1,36:37:69:984,69,0
CP000253.1 2285776 . T C 1296.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.4679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,49:49:96:1325,96,0
CP000253.1 2285873 . G A 3263.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.73;ReadPosRankSum=-0.145;SOR=0.761 GT:AD:DP:GQ:PL 1/1:1,131:132:99:3292,229,0
CP000253.1 2285887 . G A 3562.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3591,250,0
CP000253.1 2285909 . A T 3772.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3801,262,0
CP000253.1 2285911 . G A 3683.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,156:158:99:3712,256,0
CP000253.1 2285950 . A T 4282.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,183:186:99:4311,301,0
CP000253.1 2285959 . T C 4380.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,188:190:99:4409,307,0
CP000253.1 2285962 . C T 4339.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,189:190:99:4368,301,0
CP000253.1 2285965 . T C 4261.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9050;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4290,298,0
CP000253.1 2285980 . C G 4562.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.04;ReadPosRankSum=-0.945;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,197:199:99:4591,316,0
CP000253.1 2286001 . A T 4750.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.17;ReadPosRankSum=-0.685;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,204:206:99:4779,331,0
CP000253.1 2286067 . G A 4217.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9720;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4246,298,0
CP000253.1 2286077 . T A 4086.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4115,289,0
CP000253.1 2286085 . A T 1494.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.90;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1523,111,0
CP000253.1 2286086 . G A 1502.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.06;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1531,111,0
CP000253.1 2286088 . G A 1498.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.98;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1527,111,0
CP000253.1 2286091 . A T 1456.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.14;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1485,108,0
CP000253.1 2286103 . T C 1433.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.87;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1462,108,0
CP000253.1 2286104 . A G 1391.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.00;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1420,105,0
CP000253.1 2286105 . A G 1332.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.77;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1361,99,0
CP000253.1 2286106 . A C 1358.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.31;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1387,105,0
CP000253.1 2286116 . T A 1416.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.52;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1445,105,0
CP000253.1 2286117 . A C 1443.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.08;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1472,108,0
CP000253.1 2286118 . T A 1466.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.56;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1495,108,0
CP000253.1 2286123 . A G 1451.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.25;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1480,108,0
CP000253.1 2286124 . T C 1384.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.85;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1413,102,0
CP000253.1 2286127 . A T 1398.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.14;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1427,105,0
CP000253.1 2286136 . C T 1443.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.08;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1472,108,0
CP000253.1 2286140 . G A 1434.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.89;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1463,108,0
CP000253.1 2286141 . A G 1436.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.93;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1465,108,0
CP000253.1 2286142 . T C 1378.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.14;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1407,105,0
CP000253.1 2286161 . A G 2202.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2231,157,0
CP000253.1 2286162 . C A 2189.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2218,157,0
CP000253.1 2286166 . T C 2149.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2178,156,0
CP000253.1 2286168 . A G 2146.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2175,154,0
CP000253.1 2286171 . G C 2138.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,84:85:99:2167,154,0
CP000253.1 2286180 . A C 2179.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2208,157,0
CP000253.1 2286181 . A T 2210.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2239,160,0
CP000253.1 2286187 . A T 2526.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9243;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2555,181,0
CP000253.1 2286238 . T C 3119.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1403;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:118:99:3148,223,0
CP000253.1 2286241 . C T 3095.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.69;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3124,220,0
CP000253.1 2286289 . A C 3131.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.793;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6143;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.46;ReadPosRankSum=0.466;SOR=0.601 GT:AD:DP:GQ:PL 1/1:1,122:123:99:3160,232,0
CP000253.1 2286295 . C T 3204.83 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.39;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3236,235,0
CP000253.1 2286298 . T C 3174.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3203,232,0
CP000253.1 2286319 . T C 3265.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9690;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3294,235,0
CP000253.1 2286361 . T C 3857.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9445;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.95;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3886,280,0
CP000253.1 2286364 . C T 3662.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9931;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.33;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3691,265,0
CP000253.1 2286373 . C G 3601.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.71;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3630,262,0
CP000253.1 2286382 . T C 3690.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.760;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.54;ReadPosRankSum=0.453;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,133:135:99:3719,271,0
CP000253.1 2286384 . A G 3744.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6441;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.54;SOR=1.187 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3773,274,0
CP000253.1 2286399 . T C 3620.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8058;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,148:152:99:3649,265,0
CP000253.1 2286406 . C T 3738.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.846;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8889;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.12;ReadPosRankSum=1.699;SOR=0.391 GT:AD:DP:GQ:PL 1/1:1,154:156:99:3767,265,0
CP000253.1 2286422 . T G 4079.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4108,292,0
CP000253.1 2286442 . C A 4037.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4066,289,0
CP000253.1 2286449 . A G 3555.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=146;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.87;ReadPosRankSum=0.800;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,142:143:99:3584,256,0
CP000253.1 2286450 . T A 3601.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3630,259,0
CP000253.1 2286452 . T C 3310.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3339,244,0
CP000253.1 2286453 . T C 3523.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.690;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1479;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.64;ReadPosRankSum=0.715;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,142:146:99:3552,256,0
CP000253.1 2286454 . A T 3354.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.108;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.14;ReadPosRankSum=2.710;SOR=0.533 GT:AD:DP:GQ:PL 1/1:5,140:146:99:3383,170,0
CP000253.1 2286459 . A G 3627.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0483;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.19;ReadPosRankSum=1.675;SOR=0.418 GT:AD:DP:GQ:PL 1/1:1,149:150:99:3656,265,0
CP000253.1 2286468 . A T 4113.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.624;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.34;ReadPosRankSum=1.251;SOR=0.805 GT:AD:DP:GQ:PL 1/1:2,167:170:99:4142,292,0
CP000253.1 2286493 . T A 4257.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2188;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4286,301,0
CP000253.1 2286506 . G T 4305.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.796;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=-1.657;SOR=0.294 GT:AD:DP:GQ:PL 1/1:1,180:183:99:4334,307,0
CP000253.1 2286508 . T C 4224.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4253,301,0
CP000253.1 2286716 . A G 1582.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.980;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7440;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;MQRankSum=0.000;QD=25.95;ReadPosRankSum=-0.768;SOR=0.314 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1611,114,0
CP000253.1 2286717 . A C 1560.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8499;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.45;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1589,114,0
CP000253.1 2286721 . T C 1499.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8562;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=25.86;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:59:99:1528,108,0
CP000253.1 2286732 . A G 1477.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7396;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.87;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1506,108,0
CP000253.1 2286735 . A C 1412.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7396;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.16;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1441,105,0
CP000253.1 2286742 . A C 1301.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.067;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=0.000;QD=25.52;ReadPosRankSum=1.496;SOR=0.746 GT:AD:DP:GQ:PL 1/1:1,50:51:96:1330,96,0
CP000253.1 2286757 . C A 569.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:598,42,0
CP000253.1 2286760 . A C 571.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:600,42,0
CP000253.1 2286761 . G A 570.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:599,42,0
CP000253.1 2286766 . C T 523.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:22:39:552,39,0
CP000253.1 2286772 . G C 530.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:559,39,0
CP000253.1 2286775 . C T 530.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:559,39,0
CP000253.1 2286778 . C A 557.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:586,42,0
CP000253.1 2286781 . T C 566.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:595,42,0
CP000253.1 2286797 . A G 689.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:718,51,0
CP000253.1 2286800 . C T 672.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:701,51,0
CP000253.1 2286843 . A G 486.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:515,36,0
CP000253.1 2286844 . A T 443.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:472,33,0
CP000253.1 2286847 . A T 483.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:512,36,0
CP000253.1 2286866 . G C 267.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:296,21,0
CP000253.1 2286870 . C G 222.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:251,18,0
CP000253.1 2286874 . A T 222.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:251,18,0
CP000253.1 2286881 . G A 223.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:252,18,0
CP000253.1 2286884 . G C 219.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:248,18,0
CP000253.1 2286886 . G A 221.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:250,18,0
CP000253.1 2286917 . T A 178.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:207,15,0
CP000253.1 2286919 . T A 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2286922 . C T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2286924 . A G 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2286933 . G C 389.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.84;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:15:30:418,30,0
CP000253.1 2286966 . T A 407.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:436,30,0
CP000253.1 2286973 . G T 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 2286986 . G A 495.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:524,36,0
CP000253.1 2287003 . G A 483.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:512,36,0
CP000253.1 2287009 . A T 495.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:524,36,0
CP000253.1 2287123 . T A 533.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:562,39,0
CP000253.1 2287132 . A T 500.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:529,36,0
CP000253.1 2287141 . G C 500.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:529,36,0
CP000253.1 2287180 . T C 446.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.27;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:22:33:475,33,0
CP000253.1 2287193 . T A 534.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:563,39,0
CP000253.1 2287225 . G A 479.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:508,36,0
CP000253.1 2287228 . C T 465.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:494,36,0
CP000253.1 2287231 . T A 514.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:543,39,0
CP000253.1 2287255 . G A 920.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:949,66,0
CP000253.1 2287258 . G A 884.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:63:913,63,0
CP000253.1 2287279 . G A 1014.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:72:1043,72,0
CP000253.1 2287367 . G C 1424.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1453,102,0
CP000253.1 2287406 . C A 1414.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1443,99,0
CP000253.1 2287416 . T A 1372.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1401,96,0
CP000253.1 2287429 . T C 1361.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1390,96,0
CP000253.1 2287435 . T C 1461.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1490,102,0
CP000253.1 2287471 . A G 1455.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7781;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=23.11;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1484,102,0
CP000253.1 2287521 . T G 1464.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1493,105,0
CP000253.1 2287524 . T A 1478.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1507,105,0
CP000253.1 2287525 . A G 1455.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1484,105,0
CP000253.1 2287573 . G T 1437.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:60:99:1466,102,0
CP000253.1 2287823 . G A 565.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:42:594,42,0
CP000253.1 2287872 . T C 1267.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1296,90,0
CP000253.1 2287939 . A G 1675.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1418;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1704,117,0
CP000253.1 2287992 . A C 1637.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5779;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1666,114,0
CP000253.1 2288013 . C T 1680.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1709,117,0
CP000253.1 2288032 . A C 1600.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:71:99:1629,111,0
CP000253.1 2288039 . C T 1505.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5319;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.21;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1534,108,0
CP000253.1 2288065 . T C 1589.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1618,111,0
CP000253.1 2288192 . G T 324.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:353,27,0
CP000253.1 2288228 . A C 301.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:330,24,0
CP000253.1 2288309 . T C 224.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:253,18,0
CP000253.1 2288337 . G A 181.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:210,15,0
CP000253.1 2288351 . G T 226.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:255,18,0
CP000253.1 2288626 . A G 967.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.255;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7236;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.04;ReadPosRankSum=1.537;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,44:46:30:996,30,0
CP000253.1 2288632 . C T 797.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.626;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.46;ReadPosRankSum=2.032;SOR=0.743 GT:AD:DP:GQ:PL 1/1:2,39:41:18:826,18,0
CP000253.1 2288633 . C T 851.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.179;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.78;ReadPosRankSum=2.031;SOR=0.743 GT:AD:DP:GQ:PL 1/1:2,39:41:21:880,21,0
CP000253.1 2289261 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2289337 . A C 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2289356 . C G 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 2289399 . G A 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2289404 . A G 217.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:246,18,0
CP000253.1 2289439 . T A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5348;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2289453 . T A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2289454 . G T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2289492 . C T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2289507 . C A 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2289508 . A C 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2289509 . T C 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 2289515 . C T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2289516 . C T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2289517 . G T 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2289587 . G A 1287.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:90:1316,90,0
CP000253.1 2289590 . C A 1316.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1345,93,0
CP000253.1 2289593 . A T 1329.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1358,93,0
CP000253.1 2289596 . T A 1306.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1335,93,0
CP000253.1 2289599 . A T 1327.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1356,93,0
CP000253.1 2289611 . C T 1355.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1384,96,0
CP000253.1 2289638 . C T 1432.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=59.68;MQ0=0;QD=23.11;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1461,102,0
CP000253.1 2289644 . A G 1234.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.61;MQ0=0;QD=23.75;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1263,87,0
CP000253.1 2289648 . A T 1273.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.61;MQ0=0;QD=24.50;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1302,90,0
CP000253.1 2289653 . T A 1246.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.61;MQ0=0;QD=23.98;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1275,90,0
CP000253.1 2289654 . G A 1267.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.61;MQ0=0;QD=24.38;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1296,90,0
CP000253.1 2289662 . T A 1254.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.61;MQ0=0;QD=24.13;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1283,90,0
CP000253.1 2289663 . T A 1251.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.61;MQ0=0;QD=24.07;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1280,90,0
CP000253.1 2289665 . T A 1266.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.61;MQ0=0;QD=24.36;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1295,90,0
CP000253.1 2289674 . T G 1268.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.089;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;MQRankSum=-0.097;QD=23.07;ReadPosRankSum=1.733;SOR=0.339 GT:AD:DP:GQ:PL 1/1:1,54:55:90:1297,90,0
CP000253.1 2289683 . A G 1239.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.62;MQ0=0;QD=23.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:53:87:1268,87,0
CP000253.1 2289686 . T C 1218.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.62;MQ0=0;QD=23.00;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:87:1247,87,0
CP000253.1 2289726 . A G 1001.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1030,72,0
CP000253.1 2289728 . C T 1021.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1050,72,0
CP000253.1 2289731 . C T 1004.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1033,72,0
CP000253.1 2289746 . T G 939.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3205;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:44:66:968,66,0
CP000253.1 2289749 . T A 1028.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2585;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:72:1057,72,0
CP000253.1 2289794 . T A 1021.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:72:1050,72,0
CP000253.1 2289830 . C A 792.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:57:821,57,0
CP000253.1 2289842 . T G 719.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,28:28:54:748,54,0
CP000253.1 2289848 . G A 646.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,26:26:48:675,48,0
CP000253.1 2289938 . G A 439.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:33:468,33,0
CP000253.1 2289976 . T A 353.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:27:382,27,0
CP000253.1 2289977 . T C 313.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:24:342,24,0
CP000253.1 2289979 . T C 344.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:27:373,27,0
CP000253.1 2289987 . G A 348.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:27:377,27,0
CP000253.1 2290018 . T G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290021 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290028 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290035 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290038 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290042 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290055 . G C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290057 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290064 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290074 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290076 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290085 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290091 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290093 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290097 . G C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290099 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2290102 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2291426 . G T 1922.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1951,141,0
CP000253.1 2292185 . T G 5598.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4277;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,220:220:99:5627,397,0
CP000253.1 2292342 . A G 4458.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9395;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,175:178:99:4487,316,0
CP000253.1 2292459 . T A 3208.76 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3237,229,0
CP000253.1 2292462 . G T 3263.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.007;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.11;ReadPosRankSum=1.275;SOR=0.348 GT:AD:DP:GQ:PL 1/1:1,124:125:99:3292,235,0
CP000253.1 2292470 . A G 3413.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1193;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=1.011 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3442,244,0
CP000253.1 2292477 . A C 3245.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=1.016 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3274,229,0
CP000253.1 2292498 . A G 3099.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.844;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3717;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.03;ReadPosRankSum=1.115;SOR=0.746 GT:AD:DP:GQ:PL 1/1:1,128:129:99:3128,226,0
CP000253.1 2292528 . G A 3126.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6337;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3155,223,0
CP000253.1 2292552 . C T 2972.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3001,211,0
CP000253.1 2292564 . G A 2965.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0229;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2994,208,0
CP000253.1 2292567 . G A 2909.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,121:122:99:2938,208,0
CP000253.1 2292633 . A T 2235.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6003;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2264,157,0
CP000253.1 2292743 . C T 1010.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1039,72,0
CP000253.1 2292745 . T C 1007.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1036,72,0
CP000253.1 2292749 . A T 1042.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,41:41:75:1071,75,0
CP000253.1 2292783 . T A 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 2292882 . G T 263.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:292,21,0
CP000253.1 2292954 . A G 1162.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.94;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:53:81:1191,81,0
CP000253.1 2293003 . G T 2058.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.14;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2087,141,0
CP000253.1 2293030 . T A 2155.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4564;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.00;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2184,147,0
CP000253.1 2293050 . G T 2186.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.31;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2215,151,0
CP000253.1 2293051 . C T 2196.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3260;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2225,151,0
CP000253.1 2293156 . G A 83.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:111,9,0
CP000253.1 2293173 . T C 121.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:149,12,0
CP000253.1 2293185 . T G 91.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0
CP000253.1 2293191 . G A 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 2293192 . G T 159.90 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:188,15,0
CP000253.1 2293215 . A T 214.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:243,18,0
CP000253.1 2293243 . C A 229.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:258,18,0
CP000253.1 2293251 . A G 266.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.657;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.52;ReadPosRankSum=1.076;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,12:13:21:295,21,0
CP000253.1 2293368 . A G 567.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:596,42,0
CP000253.1 2293389 . C T 524.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:24:39:553,39,0
CP000253.1 2293396 . A T 539.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:568,39,0
CP000253.1 2293400 . C T 531.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:560,39,0
CP000253.1 2293402 . T A 540.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:569,39,0
CP000253.1 2293405 . T C 526.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.6603;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:39:555,39,0
CP000253.1 2293429 . A G 268.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:297,21,0
CP000253.1 2293434 . A G 257.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:286,21,0
CP000253.1 2293436 . A C 263.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:292,21,0
CP000253.1 2293438 . C T 267.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:296,21,0
CP000253.1 2293452 . T C 227.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:256,18,0
CP000253.1 2293453 . A C 263.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:292,21,0
CP000253.1 2293454 . T A 266.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:295,21,0
CP000253.1 2293459 . T G 265.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:294,21,0
CP000253.1 2293470 . T A 261.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:290,21,0
CP000253.1 2293476 . A C 267.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:296,21,0
CP000253.1 2293477 . C T 267.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:296,21,0
CP000253.1 2293530 . G A 594.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:623,42,0
CP000253.1 2293562 . T C 549.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4129;MLEAC=2;MLEAF=1.00;MQ=58.88;MQ0=0;QD=21.99;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:578,39,0
CP000253.1 2293583 . A T 481.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.73;MQ0=0;QD=21.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:510,36,0
CP000253.1 2293587 . G A 499.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9958;MLEAC=2;MLEAF=1.00;MQ=58.73;MQ0=0;QD=22.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:528,36,0
CP000253.1 2293598 . T C 407.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.35;MQ0=0;QD=22.65;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:436,30,0
CP000253.1 2293614 . C T 498.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.16;MQ0=0;QD=22.67;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:527,36,0
CP000253.1 2293699 . G A 322.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.83;MQ0=0;QD=21.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:351,24,0
CP000253.1 2293704 . T A 320.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=47.83;MQ0=0;QD=21.39;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:349,24,0
CP000253.1 2293732 . A C 17.61 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=21.00;MQ0=0;QD=8.80;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:44,3,0
CP000253.1 2299234 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=46.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2299243 . T C 487.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=39.96;MQ0=0;QD=20.32;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:36:516,36,0
CP000253.1 2299254 . C T 487.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.47;MQ0=0;QD=18.76;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:36:516,36,0
CP000253.1 2299262 . G C 487.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.47;MQ0=0;QD=18.76;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:36:516,36,0
CP000253.1 2299265 . G A 525.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9788;MLEAC=2;MLEAF=1.00;MQ=38.82;MQ0=0;QD=19.47;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:39:554,39,0
CP000253.1 2299268 . A C 566.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.929;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9788;MLEAC=2;MLEAF=1.00;MQ=41.43;MQ0=0;MQRankSum=-1.637;QD=18.89;ReadPosRankSum=1.762;SOR=0.545 GT:AD:DP:GQ:PL 1/1:1,29:30:42:595,42,0
CP000253.1 2299295 . T C 558.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.636;DP=113;Dels=0.00;ExcessHet=3.0103;FS=2.786;HaplotypeScore=15.6673;MLEAC=1;MLEAF=0.500;MQ=52.61;MQ0=0;MQRankSum=-6.686;QD=4.94;ReadPosRankSum=6.003;SOR=0.421 GT:AD:DP:GQ:PL 0/1:74,39:113:99:587,0,1679
CP000253.1 2299337 . G A 690.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.895;DP=147;Dels=0.00;ExcessHet=3.0103;FS=1.494;HaplotypeScore=18.1149;MLEAC=1;MLEAF=0.500;MQ=54.41;MQ0=0;MQRankSum=-6.958;QD=4.70;ReadPosRankSum=3.587;SOR=0.485 GT:AD:DP:GQ:PL 0/1:100,47:147:99:719,0,2194
CP000253.1 2299342 . T A 696.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.826;DP=147;Dels=0.00;ExcessHet=3.0103;FS=3.190;HaplotypeScore=21.2372;MLEAC=1;MLEAF=0.500;MQ=54.40;MQ0=0;MQRankSum=-7.244;QD=4.74;ReadPosRankSum=2.647;SOR=0.438 GT:AD:DP:GQ:PL 0/1:99,48:147:99:725,0,2239
CP000253.1 2299934 . G A 4312.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3084;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,182:185:99:4341,307,0
CP000253.1 2300440 . A G 718.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9332;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:747,54,0
CP000253.1 2300452 . G T 789.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:57:818,57,0
CP000253.1 2300461 . A G 654.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:48:683,48,0
CP000253.1 2300500 . T C 698.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:727,51,0
CP000253.1 2300514 . A G 1180.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:50:84:1209,84,0
CP000253.1 2300539 . T A 1431.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=1.160 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1460,105,0
CP000253.1 2300566 . A T 1714.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.79;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1743,123,0
CP000253.1 2300569 . T C 1628.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1657,117,0
CP000253.1 2300572 . T C 1662.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1691,120,0
CP000253.1 2300575 . T C 1610.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1639,117,0
CP000253.1 2300584 . T A 1745.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.86;SOR=1.249 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1774,126,0
CP000253.1 2300586 . C T 1656.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.604;DP=67;Dels=0.00;ExcessHet=3.0103;FS=2.557;HaplotypeScore=3.1507;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.73;ReadPosRankSum=-0.273;SOR=1.142 GT:AD:DP:GQ:PL 1/1:3,64:67:61:1685,61,0
CP000253.1 2300758 . T C 4665.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.8848;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,194:197:99:4694,331,0
CP000253.1 2300809 . A G 4702.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.876;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0518;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.28;ReadPosRankSum=-0.359;SOR=0.797 GT:AD:DP:GQ:PL 1/1:2,200:204:99:4731,305,0
CP000253.1 2300810 . C T 4808.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,203:203:99:4837,340,0
CP000253.1 2300887 . G A 5207.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6534;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,217:218:99:5236,367,0
CP000253.1 2300890 . G T 5120.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9804;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,216:218:99:5149,361,0
CP000253.1 2300896 . A G 5040.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.650;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.0102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.23;ReadPosRankSum=-0.271;SOR=0.282 GT:AD:DP:GQ:PL 1/1:1,216:219:99:5069,358,0
CP000253.1 2300905 . T G 5063.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.104;DP=220;Dels=0.00;ExcessHet=3.0103;FS=3.030;HaplotypeScore=33.5237;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.34;ReadPosRankSum=-1.222;SOR=0.122 GT:AD:DP:GQ:PL 1/1:2,215:220:99:5092,361,0
CP000253.1 2300914 . A G 5252.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.2187;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,220:223:99:5281,370,0
CP000253.1 2300953 . G A 4880.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9384;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.969 GT:AD:DP:GQ:PL 1/1:0,194:196:99:4909,346,0
CP000253.1 2300971 . A T 4460.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.513;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.8496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.78;ReadPosRankSum=0.874;SOR=0.861 GT:AD:DP:GQ:PL 1/1:2,178:183:99:4489,316,0
CP000253.1 2301043 . T C 3978.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=0.056;SOR=0.497 GT:AD:DP:GQ:PL 1/1:1,155:158:99:4007,283,0
CP000253.1 2301148 . T A 2574.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2603,187,0
CP000253.1 2301151 . A T 2516.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2545,181,0
CP000253.1 2301157 . T C 2472.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2501,178,0
CP000253.1 2301172 . A G 2255.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2284,163,0
CP000253.1 2301497 . G A 3014.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7007;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.50;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3043,208,0
CP000253.1 2301668 . T C 2639.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0539;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2668,187,0
CP000253.1 2301688 . G A 2443.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2060;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2472,175,0
CP000253.1 2302993 . T G 4050.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0762;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=1.026 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4079,289,0
CP000253.1 2303341 . A G 1191.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.1667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:87:1220,87,0
CP000253.1 2303767 . C T 194.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:223,15,0
CP000253.1 2303768 . T G 212.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.35;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:241,18,0
CP000253.1 2303791 . G A 181.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:210,15,0
CP000253.1 2303840 . T A 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2303916 . A G 979.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1008,69,0
CP000253.1 2303973 . C G 1486.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1515,105,0
CP000253.1 2304006 . A G 1590.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1619,111,0
CP000253.1 2304055 . T C 1781.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=22.55;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1810,123,0
CP000253.1 2307799 . C T 2191.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5715;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.74;SOR=1.207 GT:AD:DP:GQ:PL 1/1:0,79:80:99:2220,160,0
CP000253.1 2307898 . A G 1152.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8658;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:84:1181,84,0
CP000253.1 2309301 . G A 2755.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2784,199,0
CP000253.1 2313997 . A G 4073.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,157:157:99:4102,301,0
CP000253.1 2315983 . G A 5569.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,223:224:99:5598,391,0
CP000253.1 2318089 . T C 4016.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4045,280,0
CP000253.1 2318272 . G A 1519.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:61:99:1548,108,0
CP000253.1 2318274 . G T 1570.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1599,111,0
CP000253.1 2318290 . C A 1325.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.00;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:51:96:1354,96,0
CP000253.1 2318450 . A G 311.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:340,24,0
CP000253.1 2318738 . T C 545.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2864;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.83;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:26:39:574,39,0
CP000253.1 2318988 . C T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 2319218 . A G 2675.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6674;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2704,193,0
CP000253.1 2319251 . G T 3309.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0836;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3338,235,0
CP000253.1 2319329 . G A 4467.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4496,313,0
CP000253.1 2319734 . C T 2516.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2545,181,0
CP000253.1 2320079 . G A 3883.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,150:153:99:3912,274,0
CP000253.1 2320166 . C T 3761.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7697;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,161:162:99:3790,262,0
CP000253.1 2320169 . A G 3624.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3653,253,0
CP000253.1 2320190 . C T 3588.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3617,250,0
CP000253.1 2321298 . A G 3407.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3436,238,0
CP000253.1 2321680 . A G 1696.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1725,123,0
CP000253.1 2322171 . A G 1662.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1691,117,0
CP000253.1 2322624 . G A 366.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:395,27,0
CP000253.1 2323079 . T A 4723.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6669;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,199:199:99:4752,331,0
CP000253.1 2323379 . A G 4995.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,212:212:99:5024,349,0
CP000253.1 2323736 . C T 947.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.33;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:69:976,69,0
CP000253.1 2323752 . T C 914.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:69:943,69,0
CP000253.1 2323760 . A T 967.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:72:996,72,0
CP000253.1 2323888 . T A 1548.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5778;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1577,114,0
CP000253.1 2324336 . T C 4852.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.903;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.14;ReadPosRankSum=1.733;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,192:197:99:4881,343,0
CP000253.1 2324663 . C A 3915.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.881;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.32;ReadPosRankSum=1.659;SOR=0.682 GT:AD:DP:GQ:PL 1/1:1,160:162:99:3944,277,0
CP000253.1 2324669 . C T 3789.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,157:159:99:3818,268,0
CP000253.1 2325004 . A T 764.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,29:29:57:793,57,0
CP000253.1 2325075 . A T 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 2325120 . A G 1592.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.00;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:60:99:1621,114,0
CP000253.1 2325130 . A G 1666.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8032;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1695,120,0
CP000253.1 2325319 . A G 1915.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2555;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1944,135,0
CP000253.1 2325325 . T A 1974.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2003,138,0
CP000253.1 2325379 . T C 1648.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1677,120,0
CP000253.1 2325393 . A G 1643.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.95;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,61:62:99:1672,120,0
CP000253.1 2325490 . G A 700.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:51:729,51,0
CP000253.1 2325578 . C T 583.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:45:612,45,0
CP000253.1 2325625 . T C 913.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:66:942,66,0
CP000253.1 2325743 . A C 2404.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0908;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.90;ReadPosRankSum=-0.776;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,104:105:99:2433,169,0
CP000253.1 2325757 . T C 2385.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2414,166,0
CP000253.1 2326030 . T C 598.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:45:627,45,0
CP000253.1 2326297 . A T 3969.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9467;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,165:166:99:3998,277,0
CP000253.1 2326383 . T C 4629.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,202:202:99:4658,319,0
CP000253.1 2326432 . T C 4764.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,214:214:99:4793,325,0
CP000253.1 2326487 . C T 4311.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,187:188:99:4340,295,0
CP000253.1 2326599 . C T 2596.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=1.043 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2625,184,0
CP000253.1 2326765 . A G 718.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:54:747,54,0
CP000253.1 2326829 . T C 739.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,28:28:57:768,57,0
CP000253.1 2326843 . T C 689.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,26:26:51:718,51,0
CP000253.1 2326891 . C T 482.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:511,36,0
CP000253.1 2326964 . G A 265.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:294,21,0
CP000253.1 2326977 . T C 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 2326998 . C T 265.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:294,21,0
CP000253.1 2326999 . C T 260.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:289,21,0
CP000253.1 2327321 . A G 3027.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7539;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3056,208,0
CP000253.1 2327405 . T C 3412.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3441,235,0
CP000253.1 2327420 . A G 3362.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5278;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3391,232,0
CP000253.1 2327576 . T C 1356.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.14;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1385,99,0
CP000253.1 2327581 . G A 1372.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.46;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1401,99,0
CP000253.1 2327717 . A G 2747.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.115 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2776,196,0
CP000253.1 2327807 . T A 4426.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.520;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.74;ReadPosRankSum=1.136;SOR=0.713 GT:AD:DP:GQ:PL 1/1:2,170:172:99:4455,316,0
CP000253.1 2328077 . G A 5897.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4927;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.10;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,235:237:99:5926,421,0
CP000253.1 2328200 . A G 5744.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.659;DP=241;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.7630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.24;ReadPosRankSum=-0.782;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,236:239:99:5773,412,0
CP000253.1 2328206 . T C 5942.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.9951;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,237:238:99:5971,421,0
CP000253.1 2328288 . G A 6084.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4315;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6113,427,0
CP000253.1 2328401 . G A 4541.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8234;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4570,322,0
CP000253.1 2328637 . A G 1679.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5876;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1708,120,0
CP000253.1 2328647 . T C 1925.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1954,138,0
CP000253.1 2328734 . A T 4578.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7283;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.02;ReadPosRankSum=1.291;SOR=0.824 GT:AD:DP:GQ:PL 1/1:1,175:177:99:4607,325,0
CP000253.1 2328743 . C A 4605.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.831;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7066;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.45;ReadPosRankSum=-1.715;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,180:181:99:4634,328,0
CP000253.1 2329109 . C G 6356.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5308;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6385,463,0
CP000253.1 2329490 . T C 3053.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.583;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5207;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.45;ReadPosRankSum=-1.681;SOR=0.836 GT:AD:DP:GQ:PL 1/1:2,118:121:99:3082,220,0
CP000253.1 2329535 . G A 3155.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.689;DP=124;Dels=0.00;ExcessHet=3.0103;FS=3.692;HaplotypeScore=12.3302;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.66;ReadPosRankSum=-1.240;SOR=0.773 GT:AD:DP:GQ:PL 1/1:1,122:124:99:3184,212,0
CP000253.1 2329562 . T C 2909.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.636;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3058;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.25;ReadPosRankSum=-0.635;SOR=0.758 GT:AD:DP:GQ:PL 1/1:1,119:122:99:2938,211,0
CP000253.1 2329676 . C T 3080.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3109,220,0
CP000253.1 2329691 . C T 2957.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5294;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,119:120:99:2986,211,0
CP000253.1 2329823 . C T 1693.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1722,120,0
CP000253.1 2329916 . A G 1064.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8423;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:42:78:1093,78,0
CP000253.1 2330093 . T C 1758.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1787,123,0
CP000253.1 2330231 . A G 2109.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1372;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2138,150,0
CP000253.1 2330288 . T C 1052.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1081,75,0
CP000253.1 2330529 . C T 1239.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1268,87,0
CP000253.1 2330593 . T G 1734.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1763,123,0
CP000253.1 2330605 . T A 2117.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2146,150,0
CP000253.1 2330698 . A G 3113.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9025;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.08;SOR=1.322 GT:AD:DP:GQ:PL 1/1:0,115:117:99:3142,223,0
CP000253.1 2330919 . T C 6175.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.902;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.00;ReadPosRankSum=0.456;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,246:247:99:6204,436,0
CP000253.1 2330941 . A T 6084.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1712;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,245:245:99:6113,424,0
CP000253.1 2330998 . A G 5585.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.088;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1218;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.29;ReadPosRankSum=-1.607;SOR=0.842 GT:AD:DP:GQ:PL 1/1:2,228:234:99:5614,409,0
CP000253.1 2331118 . C T 3723.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5423;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.38;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3752,271,0
CP000253.1 2331481 . C T 2417.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2446,169,0
CP000253.1 2331502 . A C 1666.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1695,117,0
CP000253.1 2331532 . C T 1290.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:90:1319,90,0
CP000253.1 2331649 . G A 1044.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1073,75,0
CP000253.1 2332246 . A C 180.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:209,15,0
CP000253.1 2332886 . G A 1999.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2028,141,0
CP000253.1 2332937 . T C 1648.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6394;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1677,117,0
CP000253.1 2333319 . C A 788.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:57:817,57,0
CP000253.1 2333331 . A G 736.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.246;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.02;ReadPosRankSum=-1.086;SOR=0.321 GT:AD:DP:GQ:PL 1/1:1,31:32:54:765,54,0
CP000253.1 2333355 . C T 2127.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,84:85:99:2156,151,0
CP000253.1 2333746 . T C 2700.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.757;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.48;ReadPosRankSum=-0.949;SOR=0.279 GT:AD:DP:GQ:PL 1/1:1,114:115:99:2729,193,0
CP000253.1 2333755 . A T 2757.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2786,202,0
CP000253.1 2334199 . C T 979.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.22;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:72:1008,72,0
CP000253.1 2334286 . C T 821.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.871;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.68;ReadPosRankSum=-0.326;SOR=0.321 GT:AD:DP:GQ:PL 1/1:1,31:32:60:850,60,0
CP000253.1 2334299 . A G 915.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:66:944,66,0
CP000253.1 2334308 . G A 1035.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1064,75,0
CP000253.1 2334400 . C A 2355.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2384,169,0
CP000253.1 2334550 . C T 3040.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=59.83;MQ0=0;QD=23.76;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3069,214,0
CP000253.1 2334583 . A G 3122.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,131:132:99:3151,217,0
CP000253.1 2334969 . T A 677.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:27:51:706,51,0
CP000253.1 2334981 . G C 433.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:33:462,33,0
CP000253.1 2334982 . A T 429.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:33:458,33,0
CP000253.1 2335251 . G T 887.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:63:916,63,0
CP000253.1 2335563 . G A 447.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=58.40;MQ0=1;QD=23.57;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,19:19:33:476,33,0
CP000253.1 2335565 . A T 447.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.40;MQ0=1;QD=23.57;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,19:19:33:476,33,0
CP000253.1 2335591 . A G 446.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.40;MQ0=1;QD=23.51;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,19:19:33:475,33,0
CP000253.1 2335594 . A C 446.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.40;MQ0=1;QD=23.51;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,19:19:33:475,33,0
CP000253.1 2335595 . C T 447.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.40;MQ0=1;QD=23.57;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,19:19:33:476,33,0
CP000253.1 2335604 . T A 447.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.40;MQ0=1;QD=23.57;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,19:19:33:476,33,0
CP000253.1 2335619 . C T 406.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.31;MQ0=1;QD=22.60;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,18:18:30:435,30,0
CP000253.1 2335622 . A G 406.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.31;MQ0=1;QD=22.60;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,18:18:30:435,30,0
CP000253.1 2335623 . A G 403.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.31;MQ0=1;QD=22.43;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,18:18:30:432,30,0
CP000253.1 2335632 . T C 404.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.31;MQ0=1;QD=22.49;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,18:18:30:433,30,0
CP000253.1 2335639 . G A 406.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.31;MQ0=1;QD=22.60;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,18:18:30:435,30,0
CP000253.1 2335641 . T C 366.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.31;MQ0=1;QD=20.38;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,18:18:27:395,27,0
CP000253.1 2335645 . C T 396.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.31;MQ0=1;QD=22.04;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,18:18:30:425,30,0
CP000253.1 2335649 . T C 405.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.31;MQ0=1;QD=22.54;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,18:18:30:434,30,0
CP000253.1 2335744 . T A 215.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=56.92;MQ0=1;QD=21.58;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,10:10:18:244,18,0
CP000253.1 2335754 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.77;MQ0=1;QD=17.05;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 2335755 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.77;MQ0=1;QD=17.05;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 2335760 . C G 98.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.77;MQ0=1;QD=16.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,6:6:9:126,9,0
CP000253.1 2336709 . C T 3002.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4500;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3031,211,0
CP000253.1 2336826 . C G 3131.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4325;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3160,223,0
CP000253.1 2336922 . A C 3077.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3106,214,0
CP000253.1 2337169 . T G 1078.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1107,78,0
CP000253.1 2337204 . C T 603.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.44;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:45:632,45,0
CP000253.1 2337751 . C T 2874.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.189 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2903,205,0
CP000253.1 2337948 . T C 5518.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,222:222:99:5547,388,0
CP000253.1 2338095 . C T 5637.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,235:235:99:5666,397,0
CP000253.1 2338357 . G A 2517.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.810;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0408;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.50;ReadPosRankSum=-1.187;SOR=0.499 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2546,184,0
CP000253.1 2338533 . T C 2788.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2978;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2817,202,0
CP000253.1 2338615 . T C 3027.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=0.224;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,123:125:99:3056,217,0
CP000253.1 2338760 . C G 3358.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4370;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3387,241,0
CP000253.1 2338803 . A T 2583.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.709;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.58;ReadPosRankSum=-1.424;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2612,190,0
CP000253.1 2339251 . A G 5005.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=1.715;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,200:202:99:5034,358,0
CP000253.1 2339349 . A G 5314.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.2517;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.07;ReadPosRankSum=0.343;SOR=0.650 GT:AD:DP:GQ:PL 1/1:1,211:214:99:5343,379,0
CP000253.1 2339367 . G A 4801.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.7120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,196:198:99:4830,346,0
CP000253.1 2339388 . A G 4975.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0429;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,199:199:99:5004,352,0
CP000253.1 2339523 . C T 3194.83 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=1.092 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3223,235,0
CP000253.1 2339649 . A G 1578.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2703;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1607,117,0
CP000253.1 2339805 . A T 1933.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1962,138,0
CP000253.1 2340304 . A G 3218.75 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3247,229,0
CP000253.1 2340410 . C A 3628.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.848;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.11;ReadPosRankSum=1.371;SOR=0.507 GT:AD:DP:GQ:PL 1/1:1,138:140:99:3657,259,0
CP000253.1 2340683 . A G 3458.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.766;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.62;ReadPosRankSum=-1.630;SOR=0.248 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3487,253,0
CP000253.1 2340684 . A G 3487.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.844;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9309;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.03;ReadPosRankSum=1.112;SOR=0.242 GT:AD:DP:GQ:PL 1/1:1,133:135:99:3516,253,0
CP000253.1 2341120 . T A 3287.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4177;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.51;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3316,235,0
CP000253.1 2341373 . A G 3984.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.468;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0521;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.88;ReadPosRankSum=-0.535;SOR=0.832 GT:AD:DP:GQ:PL 1/1:2,152:154:99:4013,263,0
CP000253.1 2341374 . C T 4063.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.904;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.56;ReadPosRankSum=-0.498;SOR=0.848 GT:AD:DP:GQ:PL 1/1:2,151:154:99:4092,289,0
CP000253.1 2341814 . A G 5077.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6732;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,200:201:99:5106,361,0
CP000253.1 2341930 . T C 4046.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0486;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,165:167:99:4075,289,0
CP000253.1 2341933 . T C 3859.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.996;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.58;ReadPosRankSum=-1.004;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,156:157:99:3888,274,0
CP000253.1 2341989 . C T 2910.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,119:120:99:2939,208,0
CP000253.1 2342085 . G A 1668.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1697,120,0
CP000253.1 2342661 . C T 519.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:548,39,0
CP000253.1 2342697 . C T 832.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:60:861,60,0
CP000253.1 2342731 . G A 870.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:63:899,63,0
CP000253.1 2342814 . C T 2006.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.853;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.05;ReadPosRankSum=-0.963;SOR=0.715 GT:AD:DP:GQ:PL 1/1:2,89:91:99:2035,100,0
CP000253.1 2342827 . T C 2041.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.175;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.95;ReadPosRankSum=0.040;SOR=0.715 GT:AD:DP:GQ:PL 1/1:2,91:93:99:2070,103,0
CP000253.1 2343721 . G A 1406.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.05;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1435,102,0
CP000253.1 2343812 . C T 592.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.94;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,22:22:45:621,45,0
CP000253.1 2343860 . A G 224.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:253,18,0
CP000253.1 2344438 . G A 84.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:112,9,0
CP000253.1 2344439 . C T 88.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:116,9,0
CP000253.1 2344441 . T A 86.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:114,9,0
CP000253.1 2344445 . A C 48.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.25;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:6:76,6,0
CP000253.1 2344448 . C T 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 2344453 . C T 82.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:110,9,0
CP000253.1 2344457 . A T 85.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0
CP000253.1 2344459 . A T 89.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:117,9,0
CP000253.1 2344460 . T A 42.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.25;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:6:70,6,0
CP000253.1 2344471 . A T 167.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:196,15,0
CP000253.1 2344615 . G C 131.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:159,12,0
CP000253.1 2344630 . T C 131.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:159,12,0
CP000253.1 2344679 . C A 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 2344988 . A G 4276.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4412;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.988 GT:AD:DP:GQ:PL 1/1:0,175:177:99:4305,301,0
CP000253.1 2345087 . C T 4908.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6647;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,210:210:99:4937,343,0
CP000253.1 2345138 . A T 4500.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1944;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4529,319,0
CP000253.1 2345168 . G A 4283.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,171:172:99:4312,307,0
CP000253.1 2345330 . T C 3894.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4459;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.999 GT:AD:DP:GQ:PL 1/1:0,162:162:99:3923,277,0
CP000253.1 2345408 . A G 3289.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1509;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,139:141:99:3318,229,0
CP000253.1 2345414 . T C 3309.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3338,232,0
CP000253.1 2345495 . T A 2528.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0999;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2557,181,0
CP000253.1 2345498 . A T 2561.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=1.029 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2590,181,0
CP000253.1 2345528 . C T 2449.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7374;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=25.00;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2478,175,0
CP000253.1 2345549 . T C 1910.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.750;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2322;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;MQRankSum=-0.177;QD=25.48;ReadPosRankSum=0.956;SOR=1.257 GT:AD:DP:GQ:PL 1/1:2,73:75:99:1939,138,0
CP000253.1 2345552 . T C 1863.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2535;MLEAC=2;MLEAF=1.00;MQ=59.81;MQ0=0;QD=27.01;SOR=1.296 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1892,135,0
CP000253.1 2345834 . C T 2788.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.964;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.68;ReadPosRankSum=-0.261;SOR=0.574 GT:AD:DP:GQ:PL 1/1:1,112:113:99:2817,196,0
CP000253.1 2345916 . C T 3452.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3481,241,0
CP000253.1 2346095 . A G 3297.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.531;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8446;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.17;ReadPosRankSum=1.494;SOR=0.772 GT:AD:DP:GQ:PL 1/1:2,129:132:99:3326,238,0
CP000253.1 2346149 . T C 2545.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2574,187,0
CP000253.1 2346183 . G A 2665.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.050;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8426;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.39;ReadPosRankSum=-0.182;SOR=0.472 GT:AD:DP:GQ:PL 1/1:1,104:106:99:2694,190,0
CP000253.1 2346399 . A G 3558.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9403;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,151:152:99:3587,250,0
CP000253.1 2346438 . C T 3046.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0668;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3075,214,0
CP000253.1 2346563 . C T 413.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:33:442,33,0
CP000253.1 2346586 . T A 635.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5908;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:664,48,0
CP000253.1 2346824 . T A 1809.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1838,126,0
CP000253.1 2346833 . C A 1796.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1825,126,0
CP000253.1 2346996 . G A 2473.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5841;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2502,175,0
CP000253.1 2347072 . A T 2136.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2165,150,0
CP000253.1 2347583 . T C 3315.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.653;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4686;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.52;ReadPosRankSum=-0.295;SOR=0.259 GT:AD:DP:GQ:PL 1/1:1,140:141:99:3344,235,0
CP000253.1 2348168 . G A 443.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:472,33,0
CP000253.1 2348219 . T G 267.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.902;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.35;ReadPosRankSum=-0.478;SOR=1.447 GT:AD:DP:GQ:PL 1/1:1,10:11:21:296,21,0
CP000253.1 2348313 . A T 134.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:162,12,0
CP000253.1 2348319 . A T 130.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:158,12,0
CP000253.1 2348359 . A T 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 2348380 . T C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2348743 . G A 3834.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,162:166:99:3863,268,0
CP000253.1 2349532 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2349537 . A C 145.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:173,12,0
CP000253.1 2349579 . T C 135.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:163,12,0
CP000253.1 2349610 . A G 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 2349710 . A T 451.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:480,33,0
CP000253.1 2349916 . G T 5803.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.6964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,250:250:99:5832,400,0
CP000253.1 2350004 . C A 3697.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=152;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5366;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.49;ReadPosRankSum=1.056;SOR=0.574 GT:AD:DP:GQ:PL 1/1:1,150:151:99:3726,262,0
CP000253.1 2350100 . T C 3738.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0469;MLEAC=2;MLEAF=1.00;MQ=59.84;MQ0=0;MQRankSum=-0.057;QD=23.81;ReadPosRankSum=0.848;SOR=0.474 GT:AD:DP:GQ:PL 1/1:1,156:157:99:3767,265,0
CP000253.1 2351054 . A G 1152.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.883;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.06;ReadPosRankSum=1.016;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,49:51:81:1181,81,0
CP000253.1 2351411 . T C 4158.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3539;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4187,292,0
CP000253.1 2351786 . G A 2122.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=1.030 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2151,151,0
CP000253.1 2351802 . A G 1887.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,77:78:99:1916,135,0
CP000253.1 2351819 . T C 2033.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6857;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=1.124 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2062,144,0
CP000253.1 2352101 . A G 216.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.98;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:18:245,18,0
CP000253.1 2352136 . T G 267.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.942;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.32;ReadPosRankSum=1.161;SOR=1.670 GT:AD:DP:GQ:PL 1/1:1,11:12:21:296,21,0
CP000253.1 2352921 . A C 3736.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.956;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2286;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.75;ReadPosRankSum=0.980;SOR=0.458 GT:AD:DP:GQ:PL 1/1:3,148:151:99:3765,256,0
CP000253.1 2353047 . C T 4176.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.867;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.31;ReadPosRankSum=1.576;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,164:166:99:4205,298,0
CP000253.1 2355732 . G A 1764.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1793,126,0
CP000253.1 2356195 . T C 3972.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7951;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4001,283,0
CP000253.1 2356776 . G A 1068.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1097,75,0
CP000253.1 2357085 . C T 1327.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1356,93,0
CP000253.1 2357190 . T C 1300.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:90:1329,90,0
CP000253.1 2357788 . A G 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=2.78;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:39:39,0,39
CP000253.1 2358131 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2358323 . G T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2358577 . T C 444.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:33:473,33,0
CP000253.1 2358775 . C T 584.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1952;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.27;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:42:613,42,0
CP000253.1 2358945 . A T 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 2358979 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2358982 . C A 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2359207 . G T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2359243 . A C 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 2359823 . T C 188.90 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:15:217,15,0
CP000253.1 2359841 . C A 233.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:262,18,0
CP000253.1 2359843 . A C 226.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:255,18,0
CP000253.1 2359909 . A T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2359921 . T A 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2359996 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2360141 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2360216 . A T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2360234 . A G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2360266 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2360306 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2360412 . G A 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 2360528 . C T 221.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:250,18,0
CP000253.1 2360578 . C T 218.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:247,18,0
CP000253.1 2361202 . T G 1103.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:78:1132,78,0
CP000253.1 2361238 . T C 855.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:884,60,0
CP000253.1 2361514 . A G 89.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:117,9,0
CP000253.1 2362243 . T C 1479.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1508,105,0
CP000253.1 2362255 . T C 1607.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1636,114,0
CP000253.1 2362270 . C T 1585.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7906;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1614,111,0
CP000253.1 2362288 . C T 1730.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1759,120,0
CP000253.1 2363131 . C T 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 2363330 . T C 4037.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1448;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4066,280,0
CP000253.1 2363343 . T C 4048.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,176:178:99:4077,280,0
CP000253.1 2363762 . T G 6134.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.731;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.14;ReadPosRankSum=1.681;SOR=0.224 GT:AD:DP:GQ:PL 1/1:2,242:245:99:6163,439,0
CP000253.1 2363781 . G A 6221.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1423;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6250,439,0
CP000253.1 2363785 . C T 6129.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3546;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.12;ReadPosRankSum=1.697;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,243:244:99:6158,433,0
CP000253.1 2363857 . G C 5987.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,246:248:99:6016,421,0
CP000253.1 2364107 . C T 1381.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1410,102,0
CP000253.1 2364617 . G T 1593.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1622,111,0
CP000253.1 2365086 . C T 2985.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2653;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3014,208,0
CP000253.1 2366319 . A C 356.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:385,27,0
CP000253.1 2366326 . G A 352.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:381,27,0
CP000253.1 2366327 . A G 357.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:386,27,0
CP000253.1 2366337 . T C 340.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:369,27,0
CP000253.1 2366358 . G A 283.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:312,24,0
CP000253.1 2366452 . A G 213.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:18:242,18,0
CP000253.1 2366762 . C T 1161.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:84:1190,84,0
CP000253.1 2366861 . G A 1946.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5338;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1975,135,0
CP000253.1 2366948 . T A 2318.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2347,160,0
CP000253.1 2367361 . C T 287.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.78;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:11:24:316,24,0
CP000253.1 2367363 . A T 261.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.80;ReadPosRankSum=1.430;SOR=0.693 GT:AD:DP:GQ:PL 1/1:1,10:11:21:290,21,0
CP000253.1 2367442 . T A 682.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:51:711,51,0
CP000253.1 2367474 . G A 1124.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1153,81,0
CP000253.1 2367621 . T G 2273.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.006;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.26;ReadPosRankSum=-1.003;SOR=0.427 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2302,163,0
CP000253.1 2367924 . G T 3755.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.670;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.6955;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.33;ReadPosRankSum=0.689;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,160:165:99:3784,271,0
CP000253.1 2367972 . T C 3740.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8189;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3769,265,0
CP000253.1 2368265 . C T 862.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:63:891,63,0
CP000253.1 2368631 . T C 710.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:739,51,0
CP000253.1 2369015 . T C 1904.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1463;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1933,135,0
CP000253.1 2369339 . T C 1756.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1785,123,0
CP000253.1 2369350 . C A 1482.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1511,105,0
CP000253.1 2369393 . G A 649.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:48:678,48,0
CP000253.1 2369415 . G A 180.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:209,15,0
CP000253.1 2369417 . G A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2369870 . T C 849.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:60:878,60,0
CP000253.1 2370150 . G T 2260.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2289,160,0
CP000253.1 2371870 . T A 2727.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.588;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.00;ReadPosRankSum=0.635;SOR=0.119 GT:AD:DP:GQ:PL 1/1:2,122:125:99:2756,190,0
CP000253.1 2373409 . A T 2182.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2067;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2211,157,0
CP000253.1 2373424 . T A 2138.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2167,154,0
CP000253.1 2373472 . A G 2892.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0937;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2921,211,0
CP000253.1 2373702 . G A 4528.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,184:187:99:4557,322,0
CP000253.1 2373717 . C A 4550.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8322;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.34;ReadPosRankSum=1.390;SOR=0.313 GT:AD:DP:GQ:PL 1/1:1,186:190:99:4579,322,0
CP000253.1 2373739 . G A 5025.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,205:205:99:5054,355,0
CP000253.1 2373805 . T G 6014.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.356;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.49;ReadPosRankSum=-0.369;SOR=0.150 GT:AD:DP:GQ:PL 1/1:2,234:238:99:6043,436,0
CP000253.1 2374153 . C A 6480.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.712;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2872;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.56;ReadPosRankSum=1.348;SOR=0.726 GT:AD:DP:GQ:PL 1/1:2,242:244:99:6509,466,0
CP000253.1 2374156 . C T 6245.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1373;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,237:238:99:6274,448,0
CP000253.1 2374159 . A G 6081.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.852;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.66;ReadPosRankSum=1.652;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,236:240:99:6110,445,0
CP000253.1 2374183 . A C 6308.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,242:242:99:6337,451,0
CP000253.1 2374186 . C T 6209.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0733;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,239:240:99:6238,451,0
CP000253.1 2374195 . C T 6510.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8145;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6539,467,0
CP000253.1 2374339 . G A 5496.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2573;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,213:214:99:5525,388,0
CP000253.1 2374345 . T C 5294.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.450;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.74;ReadPosRankSum=-0.706;SOR=0.854 GT:AD:DP:GQ:PL 1/1:2,212:214:99:5323,340,0
CP000253.1 2374351 . G A 5324.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,209:210:99:5353,379,0
CP000253.1 2374885 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2375013 . T A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 2375015 . C T 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 2375047 . T C 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 2375138 . T C 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 2377509 . C A 290.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6111;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:319,24,0
CP000253.1 2377530 . A T 295.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.89;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:324,24,0
CP000253.1 2377846 . A G 3649.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.814;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.67;ReadPosRankSum=0.355;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,160:164:99:3678,253,0
CP000253.1 2378304 . A C 61.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:89,6,0
CP000253.1 2380076 . T A 11.12 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=2.78;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:39:39,0,39
CP000253.1 2381535 . A C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2381536 . C A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2381734 . G A 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 2381745 . G A 367.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.63;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:396,27,0
CP000253.1 2381807 . A G 271.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.91;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:300,21,0
CP000253.1 2381846 . A T 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 2381975 . G A 1291.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.959;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3265;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.07;ReadPosRankSum=1.643;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,55:56:90:1320,90,0
CP000253.1 2381996 . A G 1338.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1367,93,0
CP000253.1 2382194 . C T 3204.83 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3234,226,0
CP000253.1 2383052 . C G 2035.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3705;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.40;ReadPosRankSum=0.657;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,86:87:99:2064,144,0
CP000253.1 2383381 . T C 466.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.46;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:36:495,36,0
CP000253.1 2383446 . T C 394.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:423,30,0
CP000253.1 2383466 . G A 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 2383586 . G T 793.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.45;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:57:822,57,0
CP000253.1 2383630 . G T 1323.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6522;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:58:93:1352,93,0
CP000253.1 2383660 . G T 1846.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.761;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.52;ReadPosRankSum=1.737;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,81:82:99:1875,129,0
CP000253.1 2383944 . G A 359.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:388,27,0
CP000253.1 2384008 . A G 2505.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5198;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=1.122 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2534,181,0
CP000253.1 2385309 . T C 1588.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1617,114,0
CP000253.1 2385419 . C G 3188.81 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3217,226,0
CP000253.1 2385783 . T C 3278.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0713;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=24.11;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3307,232,0
CP000253.1 2385981 . T C 384.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:413,30,0
CP000253.1 2386900 . T C 3836.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,162:163:99:3865,268,0
CP000253.1 2386999 . T C 2486.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7145;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2515,178,0
CP000253.1 2387026 . A T 1941.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1970,138,0
CP000253.1 2387028 . A T 1913.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1942,135,0
CP000253.1 2387383 . C T 6276.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6305,451,0
CP000253.1 2387392 . C T 6228.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.426;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3715;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.12;ReadPosRankSum=-1.396;SOR=0.134 GT:AD:DP:GQ:PL 1/1:2,246:250:99:6257,448,0
CP000253.1 2387425 . G T 6569.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.023;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.28;ReadPosRankSum=0.478;SOR=0.340 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6598,473,0
CP000253.1 2387439 . G A 6680.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.05;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,247:249:99:6709,485,0
CP000253.1 2387443 . C T 6706.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7938;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6735,482,0
CP000253.1 2387446 . C T 6742.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.19;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6771,485,0
CP000253.1 2387449 . C T 6662.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.684;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.224;HaplotypeScore=15.2174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.65;ReadPosRankSum=-0.589;SOR=0.392 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6691,447,0
CP000253.1 2387620 . G A 6416.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,239:241:99:6445,458,0
CP000253.1 2387707 . A G 5386.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3848;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,213:215:99:5415,388,0
CP000253.1 2387712 . A G 5354.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3446;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,209:210:99:5383,382,0
CP000253.1 2387716 . T A 5255.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7111;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5284,373,0
CP000253.1 2387737 . A G 5236.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.2595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5265,373,0
CP000253.1 2387833 . C T 4483.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2277;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4512,319,0
CP000253.1 2387839 . T C 4457.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7632;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4486,325,0
CP000253.1 2387890 . A G 4226.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9590;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4255,307,0
CP000253.1 2387911 . A C 3294.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.685;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.74;ReadPosRankSum=-0.541;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,127:129:99:3323,215,0
CP000253.1 2388028 . C T 3147.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8353;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3176,229,0
CP000253.1 2388043 . T C 2932.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2961,214,0
CP000253.1 2388100 . T C 2516.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.904;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9028;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.67;ReadPosRankSum=-0.796;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,110:112:99:2545,146,0
CP000253.1 2388141 . G A 3064.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3093,220,0
CP000253.1 2388199 . T C 3131.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.5730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3160,226,0
CP000253.1 2388659 . T C 220.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:249,18,0
CP000253.1 2389011 . A G 2250.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2279,154,0
CP000253.1 2389719 . C T 2883.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8420;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,115:117:99:2912,205,0
CP000253.1 2390299 . C T 2735.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2764,196,0
CP000253.1 2390509 . A C 3444.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.597;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.43;ReadPosRankSum=2.200;SOR=0.764 GT:AD:DP:GQ:PL 1/1:2,145:149:99:3473,241,0
CP000253.1 2390680 . C T 2602.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2631,187,0
CP000253.1 2390722 . G A 2016.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2045,144,0
CP000253.1 2390791 . G A 623.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:48:652,48,0
CP000253.1 2391276 . C T 2777.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9140;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2806,196,0
CP000253.1 2392140 . T G 329.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:24:358,24,0
CP000253.1 2392156 . G A 320.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.39;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:349,24,0
CP000253.1 2392157 . A T 268.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.92;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:21:297,21,0
CP000253.1 2392160 . C T 311.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.79;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:340,24,0
CP000253.1 2392161 . G A 284.80 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:15:21:313,21,0
CP000253.1 2392341 . G A 711.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:740,51,0
CP000253.1 2392434 . C T 906.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3798;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:63:935,63,0
CP000253.1 2392458 . G A 1030.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:72:1059,72,0
CP000253.1 2392470 . G A 1238.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:54:87:1267,87,0
CP000253.1 2392494 . G A 1295.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:90:1324,90,0
CP000253.1 2392749 . T C 910.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9798;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:36:66:939,66,0
CP000253.1 2392774 . A C 1635.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1707;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1664,120,0
CP000253.1 2392818 . G A 2239.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2268,160,0
CP000253.1 2392836 . T C 2234.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0850;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2263,160,0
CP000253.1 2392938 . T C 2856.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6968;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2885,205,0
CP000253.1 2392977 . C T 3580.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3609,256,0
CP000253.1 2393325 . T C 5478.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.885;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.60;ReadPosRankSum=0.340;SOR=0.259 GT:AD:DP:GQ:PL 1/1:1,213:214:99:5507,394,0
CP000253.1 2393379 . C T 5279.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4214;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,199:199:99:5308,376,0
CP000253.1 2393505 . T C 3059.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8438;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3088,220,0
CP000253.1 2393559 . G A 3022.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.843;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.19;ReadPosRankSum=1.733;SOR=0.758 GT:AD:DP:GQ:PL 1/1:1,119:122:99:3051,220,0
CP000253.1 2393616 . A T 3067.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5606;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.89;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,110:111:99:3096,223,0
CP000253.1 2393651 . C T 2528.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.07;SOR=1.504 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2557,187,0
CP000253.1 2393663 . T A 2514.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.94;SOR=1.582 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2543,184,0
CP000253.1 2393771 . T C 1407.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.816;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.56;ReadPosRankSum=-0.164;SOR=0.726 GT:AD:DP:GQ:PL 1/1:1,52:55:99:1436,102,0
CP000253.1 2393852 . A G 1932.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,78:79:99:1961,138,0
CP000253.1 2393961 . C T 2048.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2077,147,0
CP000253.1 2394044 . C T 1924.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1953,138,0
CP000253.1 2394365 . A G 2860.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,111:114:99:2889,205,0
CP000253.1 2394472 . G C 3848.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.1363;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,158:160:99:3877,274,0
CP000253.1 2394517 . A G 4117.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5291;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,176:177:99:4146,289,0
CP000253.1 2394578 . T C 3998.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0189;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,158:159:99:4027,283,0
CP000253.1 2394614 . A G 3400.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.775;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.29;ReadPosRankSum=0.961;SOR=0.320 GT:AD:DP:GQ:PL 1/1:1,145:148:99:3429,250,0
CP000253.1 2394737 . A C 2218.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.601;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4160;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.10;ReadPosRankSum=0.711;SOR=1.248 GT:AD:DP:GQ:PL 1/1:2,83:85:99:2247,163,0
CP000253.1 2394747 . G A 1825.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=1.263 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1854,132,0
CP000253.1 2394748 . C T 1641.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8420;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1670,120,0
CP000253.1 2394752 . T C 1633.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,61:63:99:1662,120,0
CP000253.1 2394991 . G A 989.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1018,72,0
CP000253.1 2394998 . T C 989.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1018,72,0
CP000253.1 2395027 . G A 799.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:60:828,60,0
CP000253.1 2395064 . G A 459.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.05;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:488,36,0
CP000253.1 2395068 . C A 462.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.22;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:491,36,0
CP000253.1 2395091 . A G 530.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:559,39,0
CP000253.1 2395095 . T A 568.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:42:597,42,0
CP000253.1 2395135 . T G 685.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.43;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:51:714,51,0
CP000253.1 2395183 . C A 1152.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,44:44:84:1181,84,0
CP000253.1 2395328 . G A 3160.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.404;DP=125;Dels=0.00;ExcessHet=3.0103;FS=3.854;HaplotypeScore=10.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.49;ReadPosRankSum=0.447;SOR=0.857 GT:AD:DP:GQ:PL 1/1:1,123:125:99:3189,198,0
CP000253.1 2395346 . A G 3265.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.92;ReadPosRankSum=0.248;SOR=0.731 GT:AD:DP:GQ:PL 1/1:1,125:128:99:3294,235,0
CP000253.1 2395367 . A C 3488.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.403;DP=134;Dels=0.00;ExcessHet=3.0103;FS=3.789;HaplotypeScore=12.8140;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.04;ReadPosRankSum=-0.362;SOR=0.807 GT:AD:DP:GQ:PL 1/1:1,133:134:99:3517,218,0
CP000253.1 2395374 . T C 3576.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.937;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9234;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.69;ReadPosRankSum=-0.517;SOR=0.861 GT:AD:DP:GQ:PL 1/1:1,133:135:99:3605,259,0
CP000253.1 2395379 . T C 3536.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.288;DP=135;Dels=0.00;ExcessHet=3.0103;FS=3.789;HaplotypeScore=10.9255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.20;ReadPosRankSum=-0.757;SOR=0.829 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3565,224,0
CP000253.1 2395382 . T A 3442.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.401;DP=135;Dels=0.00;ExcessHet=3.0103;FS=3.821;HaplotypeScore=11.8196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=-0.886;SOR=0.829 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3471,224,0
CP000253.1 2395394 . C T 3702.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.211;DP=146;Dels=0.00;ExcessHet=3.0103;FS=3.650;HaplotypeScore=11.4722;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.36;ReadPosRankSum=-1.282;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,145:146:99:3731,229,0
CP000253.1 2395397 . G T 3661.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.647;DP=146;Dels=0.00;ExcessHet=3.0103;FS=3.722;HaplotypeScore=13.3661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.08;ReadPosRankSum=0.126;SOR=0.666 GT:AD:DP:GQ:PL 1/1:2,144:146:99:3690,240,0
CP000253.1 2395406 . C G 3764.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.683;DP=151;Dels=0.00;ExcessHet=3.0103;FS=3.590;HaplotypeScore=9.7695;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=-1.363;SOR=0.693 GT:AD:DP:GQ:PL 1/1:1,149:151:99:3793,234,0
CP000253.1 2395421 . T C 3790.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.846;DP=143;Dels=0.00;ExcessHet=3.0103;FS=3.424;HaplotypeScore=8.4485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.51;ReadPosRankSum=-1.708;SOR=0.546 GT:AD:DP:GQ:PL 1/1:1,142:143:99:3819,245,0
CP000253.1 2395427 . G A 3188.81 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.465;DP=115;Dels=0.00;ExcessHet=3.0103;FS=3.283;HaplotypeScore=9.4351;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.73;ReadPosRankSum=-1.657;SOR=0.450 GT:AD:DP:GQ:PL 1/1:1,114:115:99:3217,201,0
CP000253.1 2395430 . T C 3249.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.056;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4218;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.26;ReadPosRankSum=-1.597;SOR=0.450 GT:AD:DP:GQ:PL 1/1:1,114:115:99:3278,235,0
CP000253.1 2395433 . G T 3154.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;DP=115;Dels=0.00;ExcessHet=3.0103;FS=3.283;HaplotypeScore=10.4192;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.43;ReadPosRankSum=-1.522;SOR=0.450 GT:AD:DP:GQ:PL 1/1:1,114:115:99:3183,206,0
CP000253.1 2395439 . A G 3074.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=112;Dels=0.00;ExcessHet=3.0103;FS=3.299;HaplotypeScore=10.4067;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.45;ReadPosRankSum=-1.393;SOR=0.486 GT:AD:DP:GQ:PL 1/1:1,111:112:99:3103,204,0
CP000253.1 2395442 . A G 3070.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.767;DP=112;Dels=0.00;ExcessHet=3.0103;FS=3.332;HaplotypeScore=7.6397;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.42;ReadPosRankSum=-1.299;SOR=0.486 GT:AD:DP:GQ:PL 1/1:1,111:112:99:3099,200,0
CP000253.1 2395445 . A T 3122.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5250;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.39;ReadPosRankSum=-1.262;SOR=0.423 GT:AD:DP:GQ:PL 1/1:1,113:114:99:3151,226,0
CP000253.1 2395448 . G A 3299.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.646;DP=124;Dels=0.00;ExcessHet=3.0103;FS=3.083;HaplotypeScore=7.4191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.83;ReadPosRankSum=-1.254;SOR=0.381 GT:AD:DP:GQ:PL 1/1:1,122:124:99:3328,215,0
CP000253.1 2395460 . T A 3831.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.406;DP=144;Dels=0.00;ExcessHet=3.0103;FS=3.388;HaplotypeScore=5.3432;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.61;ReadPosRankSum=-1.156;SOR=0.520 GT:AD:DP:GQ:PL 1/1:1,143:144:99:3860,242,0
CP000253.1 2395466 . T C 3829.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.902;DP=144;Dels=0.00;ExcessHet=3.0103;FS=3.424;HaplotypeScore=9.8194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.78;ReadPosRankSum=-1.079;SOR=0.546 GT:AD:DP:GQ:PL 1/1:1,142:144:99:3858,254,0
CP000253.1 2395469 . A G 3893.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.954;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9248;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.23;ReadPosRankSum=-0.994;SOR=0.546 GT:AD:DP:GQ:PL 1/1:1,142:144:99:3922,280,0
CP000253.1 2395472 . C G 3830.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.873;DP=148;Dels=0.00;ExcessHet=3.0103;FS=2.247;HaplotypeScore=12.6436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.06;ReadPosRankSum=1.186;SOR=0.607 GT:AD:DP:GQ:PL 1/1:3,144:148:99:3859,249,0
CP000253.1 2395478 . G A 4265.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.289;DP=162;Dels=0.00;ExcessHet=3.0103;FS=3.403;HaplotypeScore=15.4090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.33;ReadPosRankSum=-0.920;SOR=0.529 GT:AD:DP:GQ:PL 1/1:1,161:162:99:4294,275,0
CP000253.1 2395484 . G A 4310.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.928;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.45;ReadPosRankSum=-0.734;SOR=0.506 GT:AD:DP:GQ:PL 1/1:1,162:163:99:4339,310,0
CP000253.1 2395493 . G A 4529.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.49;ReadPosRankSum=-0.720;SOR=0.492 GT:AD:DP:GQ:PL 1/1:1,170:173:99:4558,322,0
CP000253.1 2395499 . T C 4591.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.921;DP=175;Dels=0.00;ExcessHet=3.0103;FS=3.332;HaplotypeScore=13.4954;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.39;ReadPosRankSum=-0.869;SOR=0.400 GT:AD:DP:GQ:PL 1/1:2,172:175:99:4620,300,0
CP000253.1 2396180 . T A 6355.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5981;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=1.109 GT:AD:DP:GQ:PL 1/1:0,243:243:99:6384,454,0
CP000253.1 2396195 . T C 5520.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.189 GT:AD:DP:GQ:PL 1/1:0,219:220:99:5549,400,0
CP000253.1 2396198 . G A 5604.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=1.142 GT:AD:DP:GQ:PL 1/1:0,217:219:99:5633,403,0
CP000253.1 2396201 . C A 5535.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5690;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.39;ReadPosRankSum=0.032;SOR=0.427 GT:AD:DP:GQ:PL 1/1:1,217:218:99:5564,397,0
CP000253.1 2396207 . C T 5654.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6205;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=1.153 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5683,403,0
CP000253.1 2396210 . C T 5620.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8703;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.168 GT:AD:DP:GQ:PL 1/1:0,217:218:99:5649,406,0
CP000253.1 2396222 . A T 5702.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.547;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9361;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.69;ReadPosRankSum=-0.111;SOR=1.173 GT:AD:DP:GQ:PL 1/1:2,220:222:99:5731,412,0
CP000253.1 2396240 . G A 5561.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,209:209:99:5590,397,0
CP000253.1 2396256 . G T 4374.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2490;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.84;SOR=1.144 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4403,313,0
CP000253.1 2396257 . T G 4378.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.879;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.86;ReadPosRankSum=-0.733;SOR=0.898 GT:AD:DP:GQ:PL 1/1:1,162:163:99:4407,316,0
CP000253.1 2396358 . C T 1448.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.34;SOR=1.077 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1477,108,0
CP000253.1 2396381 . A G 1343.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2851;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.42;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,49:50:99:1372,99,0
CP000253.1 2396407 . C T 1290.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.89;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:96:1319,96,0
CP000253.1 2396515 . G A 1949.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1978,141,0
CP000253.1 2396701 . A G 2533.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.828;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.12;ReadPosRankSum=0.536;SOR=0.422 GT:AD:DP:GQ:PL 1/1:1,96:98:99:2562,187,0
CP000253.1 2398200 . T C 936.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:69:965,69,0
CP000253.1 2398608 . T C 2117.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.839;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.15;ReadPosRankSum=0.411;SOR=0.808 GT:AD:DP:GQ:PL 1/1:1,80:81:99:2146,154,0
CP000253.1 2399141 . T G 1815.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.774;DP=76;Dels=0.00;ExcessHet=3.0103;FS=3.641;HaplotypeScore=4.5436;MLEAC=2;MLEAF=1.00;MQ=58.13;MQ0=2;MQRankSum=-0.137;QD=23.89;ReadPosRankSum=-0.984;SOR=0.721 GT:AD:DP:GQ:PL 1/1:1,75:76:99:1844,132,0
CP000253.1 2399142 . C T 1783.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5436;MLEAC=2;MLEAF=1.00;MQ=58.13;MQ0=2;QD=23.47;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1812,126,0
CP000253.1 2399162 . G T 1517.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.921;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.13;MQ0=2;MQRankSum=3.490;QD=23.00;ReadPosRankSum=-1.464;SOR=0.326 GT:AD:DP:GQ:PL 1/1:2,64:66:99:1546,108,0
CP000253.1 2399222 . G T 1280.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.942;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9757;MLEAC=2;MLEAF=1.00;MQ=54.84;MQ0=2;MQRankSum=-0.379;QD=21.35;ReadPosRankSum=-0.718;SOR=0.621 GT:AD:DP:GQ:PL 1/1:1,59:60:93:1309,93,0
CP000253.1 2399342 . G T 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 2399363 . T A 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 2399374 . T C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2399381 . G T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2399382 . T C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2399402 . G T 275.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.22;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:304,21,0
CP000253.1 2399441 . G T 395.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:17:30:424,30,0
CP000253.1 2399851 . C T 365.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:394,27,0
CP000253.1 2399953 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 2399978 . C A 184.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:213,15,0
CP000253.1 2403684 . G A 2944.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2973,208,0
CP000253.1 2403974 . A G 5937.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5309;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,241:242:99:5966,418,0
CP000253.1 2405019 . G A 1208.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:48:87:1237,87,0
CP000253.1 2405366 . T C 563.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5075;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.51;ReadPosRankSum=-0.830;SOR=0.793 GT:AD:DP:GQ:PL 1/1:1,22:23:42:592,42,0
CP000253.1 2406462 . G A 3409.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,144:146:99:3438,241,0
CP000253.1 2407115 . A G 1206.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1235,87,0
CP000253.1 2408139 . A G 2329.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2358,169,0
CP000253.1 2408153 . T C 2155.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.724;DP=84;Dels=0.00;ExcessHet=3.0103;FS=4.191;HaplotypeScore=9.0848;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.66;ReadPosRankSum=1.632;SOR=1.096 GT:AD:DP:GQ:PL 1/1:1,83:84:99:2184,128,0
CP000253.1 2408269 . C T 256.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:285,21,0
CP000253.1 2408297 . A G 173.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:202,15,0
CP000253.1 2408330 . A T 182.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:211,15,0
CP000253.1 2408342 . G A 270.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:299,21,0
CP000253.1 2408343 . C T 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 2408345 . A T 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 2408347 . T C 264.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:293,21,0
CP000253.1 2408371 . A G 629.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:658,45,0
CP000253.1 2408379 . T C 584.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:613,42,0
CP000253.1 2408381 . T C 583.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:612,42,0
CP000253.1 2408382 . T A 571.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:600,42,0
CP000253.1 2408386 . T C 625.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:27:45:654,45,0
CP000253.1 2408391 . G A 713.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:742,51,0
CP000253.1 2408912 . C T 406.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:19:30:435,30,0
CP000253.1 2408932 . A C 447.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:476,33,0
CP000253.1 2409059 . A T 361.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.28;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:390,27,0
CP000253.1 2409198 . A T 811.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.36;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:57:840,57,0
CP000253.1 2409214 . A G 850.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:60:879,60,0
CP000253.1 2409356 . A C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2409430 . C T 165.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:194,15,0
CP000253.1 2409470 . A T 219.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:248,18,0
CP000253.1 2409780 . C A 2463.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2492,175,0
CP000253.1 2410177 . T C 910.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:69:939,69,0
CP000253.1 2410242 . A T 753.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.92;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,27:27:57:782,57,0
CP000253.1 2410374 . C T 1082.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.07;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,40:40:81:1111,81,0
CP000253.1 2410482 . T C 3757.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5726;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=1.219 GT:AD:DP:GQ:PL 1/1:0,143:145:99:3786,268,0
CP000253.1 2410488 . C A 4162.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.193 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4191,298,0
CP000253.1 2410494 . T C 4307.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=1.126 GT:AD:DP:GQ:PL 1/1:0,169:169:99:4336,304,0
CP000253.1 2410505 . A C 4383.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=1.152 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4412,310,0
CP000253.1 2410506 . G A 4416.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2390;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=1.152 GT:AD:DP:GQ:PL 1/1:0,171:175:99:4445,313,0
CP000253.1 2410533 . A G 4555.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5636;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,194:195:99:4584,319,0
CP000253.1 2410539 . T C 4618.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5266;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,195:197:99:4647,325,0
CP000253.1 2410815 . T G 1788.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1817,129,0
CP000253.1 2410818 . G A 1819.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1848,129,0
CP000253.1 2410819 . T C 1760.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1789,126,0
CP000253.1 2410988 . T A 1551.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1580,111,0
CP000253.1 2411226 . T C 653.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:48:682,48,0
CP000253.1 2411487 . T G 784.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:57:813,57,0
CP000253.1 2411637 . A T 3587.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6629;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3616,253,0
CP000253.1 2411684 . T C 3870.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.623;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.46;ReadPosRankSum=0.201;SOR=0.484 GT:AD:DP:GQ:PL 1/1:2,163:165:99:3899,274,0
CP000253.1 2411722 . T C 4661.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7701;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,198:198:99:4690,328,0
CP000253.1 2411744 . A T 5091.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0619;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,213:213:99:5120,352,0
CP000253.1 2412569 . C T 3067.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4609;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,125:128:99:3096,223,0
CP000253.1 2412951 . T C 450.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:479,33,0
CP000253.1 2412954 . C T 450.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:479,33,0
CP000253.1 2412956 . G A 440.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:469,33,0
CP000253.1 2413491 . G A 276.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:305,21,0
CP000253.1 2413997 . G A 1504.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1533,105,0
CP000253.1 2414213 . T C 1158.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:81:1187,81,0
CP000253.1 2414247 . T C 1178.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=59.45;MQ0=0;QD=23.58;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1207,84,0
CP000253.1 2414344 . C T 764.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:34:54:793,54,0
CP000253.1 2414452 . G T 1349.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6927;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:96:1378,96,0
CP000253.1 2414515 . A G 1466.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1495,102,0
CP000253.1 2414543 . C G 1438.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1467,102,0
CP000253.1 2414570 . G A 1282.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1311,90,0
CP000253.1 2414828 . T A 2303.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1324;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2332,166,0
CP000253.1 2414831 . A G 2234.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2383;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,95:96:99:2263,160,0
CP000253.1 2414992 . A G 3330.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.895;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.49;ReadPosRankSum=0.631;SOR=0.650 GT:AD:DP:GQ:PL 1/1:3,133:137:99:3359,196,0
CP000253.1 2415583 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2415960 . A G 984.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1013,69,0
CP000253.1 2416105 . A G 1257.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:87:1286,87,0
CP000253.1 2416303 . T C 484.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:36:513,36,0
CP000253.1 2416407 . A T 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 2416432 . G A 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2416457 . T C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2416461 . C A 230.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:259,18,0
CP000253.1 2416539 . T G 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2416730 . A T 86.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:114,9,0
CP000253.1 2416731 . A T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 2416732 . C T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 2416736 . C T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 2416874 . C T 124.79 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;DP=7;Dels=0.00;ExcessHet=3.0103;FS=3.680;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.83;ReadPosRankSum=-0.366;SOR=1.108 GT:AD:DP:GQ:PL 0/1:1,6:7:23:153,0,23
CP000253.1 2416878 . A T 121.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;DP=7;Dels=0.00;ExcessHet=3.0103;FS=3.680;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.40;ReadPosRankSum=0.000;SOR=1.108 GT:AD:DP:GQ:PL 0/1:1,6:7:25:150,0,25
CP000253.1 2416941 . G A 717.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:54:746,54,0
CP000253.1 2416995 . C T 1833.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1862,132,0
CP000253.1 2417021 . G A 2297.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2588;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2326,166,0
CP000253.1 2417046 . T A 2489.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2427;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2518,178,0
CP000253.1 2417049 . G A 2599.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=1.043 GT:AD:DP:GQ:PL 1/1:0,104:106:99:2628,184,0
CP000253.1 2417058 . T C 2899.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.77;ReadPosRankSum=1.109;SOR=0.633 GT:AD:DP:GQ:PL 1/1:1,121:122:99:2928,208,0
CP000253.1 2417130 . G A 3872.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6570;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,171:171:99:3901,268,0
CP000253.1 2417139 . A T 3814.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8760;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,170:171:99:3843,262,0
CP000253.1 2417154 . T A 4009.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.718;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.04;ReadPosRankSum=0.445;SOR=0.716 GT:AD:DP:GQ:PL 1/1:2,172:175:99:4038,277,0
CP000253.1 2417382 . T G 1568.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1597,111,0
CP000253.1 2417451 . T A 1267.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:90:1296,90,0
CP000253.1 2417616 . C T 366.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.58;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:395,27,0
CP000253.1 2417661 . A T 405.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:434,30,0
CP000253.1 2417664 . A T 393.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:422,30,0
CP000253.1 2417667 . G A 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0
CP000253.1 2417715 . T A 943.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:42:66:972,66,0
CP000253.1 2417718 . T A 1059.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:75:1088,75,0
CP000253.1 2417727 . A T 1101.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.730;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2467;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.49;ReadPosRankSum=-1.310;SOR=0.487 GT:AD:DP:GQ:PL 1/1:1,48:49:78:1130,78,0
CP000253.1 2417736 . G C 1180.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7252;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1209,84,0
CP000253.1 2417739 . A C 1171.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6978;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1200,84,0
CP000253.1 2417748 . G A 1130.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:48:81:1159,81,0
CP000253.1 2417751 . A G 1181.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1210,84,0
CP000253.1 2417754 . A G 1178.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1207,84,0
CP000253.1 2417855 . T C 1145.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:81:1174,81,0
CP000253.1 2417859 . A G 1093.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:78:1122,78,0
CP000253.1 2417862 . A T 1091.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1120,78,0
CP000253.1 2417865 . G A 1259.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1288,90,0
CP000253.1 2417871 . C A 1454.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1483,102,0
CP000253.1 2418294 . T C 963.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:69:992,69,0
CP000253.1 2418475 . T C 1463.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1492,102,0
CP000253.1 2418477 . C A 1515.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1544,108,0
CP000253.1 2419222 . A G 3407.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3436,238,0
CP000253.1 2419368 . A G 1948.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2285;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.15;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:90:99:1977,138,0
CP000253.1 2419742 . G A 328.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.675;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4335;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.55;ReadPosRankSum=0.218;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,15:16:26:357,26,0
CP000253.1 2420110 . A T 983.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.86;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:69:1012,69,0
CP000253.1 2420112 . T C 898.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.322;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.40;ReadPosRankSum=-0.414;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,41:42:63:927,63,0
CP000253.1 2420198 . A T 580.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:609,42,0
CP000253.1 2420494 . T C 2019.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6451;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.49;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,86:88:99:2048,141,0
CP000253.1 2420940 . C T 1124.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1153,81,0
CP000253.1 2421021 . G A 1929.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3449;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1958,135,0
CP000253.1 2421639 . G C 263.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:292,21,0
CP000253.1 2421704 . T C 363.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:392,27,0
CP000253.1 2421716 . C T 370.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:27:399,27,0
CP000253.1 2422051 . T C 1313.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1342,93,0
CP000253.1 2422069 . C T 1579.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1608,111,0
CP000253.1 2422231 . A G 1962.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,86:86:99:1991,138,0
CP000253.1 2422268 . T C 1927.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1956,135,0
CP000253.1 2422355 . T C 1089.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1118,81,0
CP000253.1 2422419 . A T 806.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:60:835,60,0
CP000253.1 2422494 . G A 1826.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.332;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8508;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.83;ReadPosRankSum=0.741;SOR=0.855 GT:AD:DP:GQ:PL 1/1:2,78:80:91:1855,91,0
CP000253.1 2422648 . T C 3414.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.593;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3816;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.61;ReadPosRankSum=-1.012;SOR=0.745 GT:AD:DP:GQ:PL 1/1:2,156:159:99:3443,199,0
CP000253.1 2422708 . T C 2812.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.952;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.99;ReadPosRankSum=1.519;SOR=0.474 GT:AD:DP:GQ:PL 1/1:3,131:134:99:2841,163,0
CP000253.1 2422870 . T C 526.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:555,39,0
CP000253.1 2423663 . A T 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 2423712 . A T 490.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.31;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:519,36,0
CP000253.1 2424007 . T C 83.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:111,9,0
CP000253.1 2424022 . T G 57.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.150;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=14.44;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,3:4:6:85,6,0
CP000253.1 2424604 . T C 2191.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0722;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:94:99:2220,154,0
CP000253.1 2424649 . C T 2071.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3928;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2100,144,0
CP000253.1 2424955 . C T 885.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:63:914,63,0
CP000253.1 2426407 . A C 3895.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.857;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.13;ReadPosRankSum=1.353;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,154:155:99:3924,239,0
CP000253.1 2426473 . A G 3279.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.421;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2264;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.85;ReadPosRankSum=0.988;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,130:133:99:3308,206,0
CP000253.1 2426557 . T C 3004.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.567;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.83;ReadPosRankSum=-0.386;SOR=0.779 GT:AD:DP:GQ:PL 1/1:2,119:125:99:3033,180,0
CP000253.1 2426593 . C T 3294.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.951;DP=135;Dels=0.00;ExcessHet=3.0103;FS=6.797;HaplotypeScore=13.5867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.41;ReadPosRankSum=-0.437;SOR=0.459 GT:AD:DP:GQ:PL 1/1:2,133:135:99:3323,168,0
CP000253.1 2426781 . C T 2664.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.837;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7968;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.23;ReadPosRankSum=-1.386;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,109:110:99:2693,156,0
CP000253.1 2428265 . C T 2606.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5065;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.15;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2635,190,0
CP000253.1 2428328 . T G 3525.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.967;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.31;ReadPosRankSum=1.009;SOR=0.544 GT:AD:DP:GQ:PL 1/1:1,133:134:99:3554,253,0
CP000253.1 2428547 . G A 5027.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,205:205:99:5056,352,0
CP000253.1 2428794 . G A 805.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:57:834,57,0
CP000253.1 2428891 . A G 1025.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:72:1054,72,0
CP000253.1 2428981 . C A 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 2429103 . T C 4721.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2735;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.124 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4750,334,0
CP000253.1 2429496 . C T 481.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:510,36,0
CP000253.1 2429541 . G A 756.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:785,54,0
CP000253.1 2429599 . A G 1147.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1176,81,0
CP000253.1 2430023 . T A 1477.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1961;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1506,102,0
CP000253.1 2430268 . A C 539.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.963;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1518;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.76;ReadPosRankSum=-0.535;SOR=0.343 GT:AD:DP:GQ:PL 1/1:1,25:26:39:568,39,0
CP000253.1 2430755 . A T 1816.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1845,126,0
CP000253.1 2430766 . C A 1916.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1945,132,0
CP000253.1 2430767 . G T 1911.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1940,132,0
CP000253.1 2430999 . G A 461.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.16;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:36:490,36,0
CP000253.1 2431062 . A G 546.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:42:575,42,0
CP000253.1 2431125 . T A 357.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:386,27,0
CP000253.1 2431193 . A G 568.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.08;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:42:597,42,0
CP000253.1 2431265 . T C 1584.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5439;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1613,114,0
CP000253.1 2431291 . T G 1666.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1695,117,0
CP000253.1 2431382 . A G 2613.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5035;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2642,187,0
CP000253.1 2431388 . A G 2690.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.874;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.81;ReadPosRankSum=-0.843;SOR=0.454 GT:AD:DP:GQ:PL 1/1:1,112:113:99:2719,190,0
CP000253.1 2431832 . C T 4105.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6044;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.19;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,151:154:99:4134,295,0
CP000253.1 2431977 . A G 5312.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0441;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,211:213:99:5341,379,0
CP000253.1 2432051 . A T 6454.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6483,457,0
CP000253.1 2432212 . T C 6396.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.837;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=0.520;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6425,454,0
CP000253.1 2433256 . G A 3473.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4138;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,151:152:99:3502,241,0
CP000253.1 2433304 . A G 3310.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.891;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4388;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.15;ReadPosRankSum=-1.067;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,142:143:99:3339,229,0
CP000253.1 2433343 . A T 3283.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1836;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3312,226,0
CP000253.1 2433464 . C A 1319.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.15;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1348,93,0
CP000253.1 2433466 . T A 1184.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4075;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.35;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:84:1213,84,0
CP000253.1 2434908 . G A 964.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:38:69:993,69,0
CP000253.1 2435020 . C A 2280.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2309,160,0
CP000253.1 2436077 . A C 1832.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1861,132,0
CP000253.1 2436639 . A G 280.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:309,21,0
CP000253.1 2436658 . G T 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 2436986 . T G 792.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.02;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:57:821,57,0
CP000253.1 2437219 . A G 392.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:421,30,0
CP000253.1 2437299 . C T 400.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:429,30,0
CP000253.1 2437418 . T G 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:211,15,0
CP000253.1 2437447 . T A 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2437488 . C T 50.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:78,6,0
CP000253.1 2437504 . T C 37.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:65,6,0
CP000253.1 2437641 . T C 259.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.87;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:21:288,21,0
CP000253.1 2438066 . C T 178.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:207,15,0
CP000253.1 2438444 . T C 2665.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=1.134 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2694,193,0
CP000253.1 2438690 . C T 4964.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5412;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,205:205:99:4993,346,0
CP000253.1 2439107 . G A 4027.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6285;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=1.026 GT:AD:DP:GQ:PL 1/1:0,157:157:99:4056,289,0
CP000253.1 2439125 . G A 3984.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0437;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.998 GT:AD:DP:GQ:PL 1/1:0,155:157:99:4013,283,0
CP000253.1 2439132 . A G 4054.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2573;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4083,289,0
CP000253.1 2439155 . T C 3577.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3606,256,0
CP000253.1 2439197 . T C 3612.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4299;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3641,259,0
CP000253.1 2439221 . G A 3482.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3511,247,0
CP000253.1 2439280 . T A 3209.76 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8146;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3238,226,0
CP000253.1 2439356 . A T 2656.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.15;ReadPosRankSum=1.736;SOR=0.553 GT:AD:DP:GQ:PL 1/1:1,109:111:99:2685,187,0
CP000253.1 2439371 . G C 2499.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4028;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,104:106:99:2528,178,0
CP000253.1 2439492 . T C 1814.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.69;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1843,132,0
CP000253.1 2439509 . T C 1787.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1816,129,0
CP000253.1 2439537 . A G 1781.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.59;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1810,129,0
CP000253.1 2439554 . T C 1318.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:96:1347,96,0
CP000253.1 2439558 . C T 1255.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.947;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.63;ReadPosRankSum=-1.169;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,48:49:90:1284,90,0
CP000253.1 2439561 . A G 1224.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:90:1253,90,0
CP000253.1 2439566 . C A 1200.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.905;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.55;ReadPosRankSum=1.441;SOR=0.643 GT:AD:DP:GQ:PL 1/1:1,46:47:87:1229,87,0
CP000253.1 2439567 . C T 1193.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:87:1222,87,0
CP000253.1 2439571 . C T 1200.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:87:1229,87,0
CP000253.1 2439572 . C T 1213.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:87:1242,87,0
CP000253.1 2439582 . T C 1379.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1408,99,0
CP000253.1 2439584 . G T 1527.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1556,108,0
CP000253.1 2439594 . C T 1904.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1933,135,0
CP000253.1 2439616 . C T 2166.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3092;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2195,151,0
CP000253.1 2439627 . G A 2253.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2282,159,0
CP000253.1 2439637 . A G 2195.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9168;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:99:99:2224,154,0
CP000253.1 2439642 . T A 2218.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2247,157,0
CP000253.1 2441044 . G A 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 2441045 . C T 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 2442174 . T C 4351.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.765;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8165;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.04;ReadPosRankSum=-1.417;SOR=0.304 GT:AD:DP:GQ:PL 1/1:1,180:182:99:4380,310,0
CP000253.1 2443033 . T C 206.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:235,18,0
CP000253.1 2443612 . T C 466.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:36:495,36,0
CP000253.1 2443633 . C T 818.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:60:847,60,0
CP000253.1 2444701 . A G 697.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:726,51,0
CP000253.1 2445799 . G A 3973.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,151:153:99:4002,283,0
CP000253.1 2446162 . C G 4320.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0781;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,171:173:99:4349,313,0
CP000253.1 2446163 . C A 4404.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4433,316,0
CP000253.1 2446246 . C T 3972.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4001,280,0
CP000253.1 2446345 . T A 3494.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,140:142:99:3523,247,0
CP000253.1 2446393 . C A 2605.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.809;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=95.2788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.06;ReadPosRankSum=1.034;SOR=0.344 GT:AD:DP:GQ:PL 1/1:1,103:104:99:2634,190,0
CP000253.1 2446423 . C A 2200.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.780;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.01;ReadPosRankSum=-0.099;SOR=0.560 GT:AD:DP:GQ:PL 1/1:1,87:90:99:2229,160,0
CP000253.1 2446516 . C T 905.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:66:934,66,0
CP000253.1 2446570 . T C 1130.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.667;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.62;ReadPosRankSum=1.664;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,49:50:81:1159,81,0
CP000253.1 2446630 . C T 1688.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7205;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1717,117,0
CP000253.1 2446641 . T A 1812.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1841,126,0
CP000253.1 2446680 . T C 1811.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.788;DP=81;Dels=0.00;ExcessHet=3.0103;FS=3.174;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.37;ReadPosRankSum=-0.364;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,80:81:99:1840,128,0
CP000253.1 2446697 . T A 1931.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1960,135,0
CP000253.1 2446764 . A T 1005.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:72:1034,72,0
CP000253.1 2446792 . C A 982.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1011,69,0
CP000253.1 2447056 . A G 127.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7602;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.17;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:155,12,0
CP000253.1 2448251 . G A 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2449571 . A G 1681.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1263;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1710,120,0
CP000253.1 2450597 . T A 1250.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1279,90,0
CP000253.1 2450645 . T C 1151.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1180,81,0
CP000253.1 2450685 . T C 688.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:28:51:717,51,0
CP000253.1 2450841 . G A 2536.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6106;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2565,175,0
CP000253.1 2450850 . G C 2133.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.00;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2162,147,0
CP000253.1 2450853 . A G 2196.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2225,151,0
CP000253.1 2450856 . C A 2189.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2218,151,0
CP000253.1 2450860 . A G 2172.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2201,150,0
CP000253.1 2450862 . C A 2164.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2193,151,0
CP000253.1 2450868 . A T 2197.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2226,151,0
CP000253.1 2450871 . A T 2186.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2215,151,0
CP000253.1 2450875 . G A 2176.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2205,151,0
CP000253.1 2450880 . G A 2197.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2226,151,0
CP000253.1 2450883 . T C 2196.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2225,151,0
CP000253.1 2450890 . C T 2231.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6814;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=22.32;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2260,154,0
CP000253.1 2450898 . A G 2272.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=22.73;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2301,157,0
CP000253.1 2450901 . A T 2264.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=22.65;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2293,157,0
CP000253.1 2450907 . C T 2281.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=22.82;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2310,157,0
CP000253.1 2450940 . G A 580.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:609,42,0
CP000253.1 2450941 . T C 584.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:613,42,0
CP000253.1 2450943 . A T 584.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:613,42,0
CP000253.1 2450960 . T G 545.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.028;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.83;ReadPosRankSum=1.604;SOR=0.477 GT:AD:DP:GQ:PL 1/1:1,24:25:39:574,39,0
CP000253.1 2450964 . G A 577.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:606,42,0
CP000253.1 2450970 . C T 579.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:608,42,0
CP000253.1 2450971 . A G 544.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.79;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:573,39,0
CP000253.1 2450976 . G A 572.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:601,42,0
CP000253.1 2450977 . C T 498.31 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.587;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.93;ReadPosRankSum=1.465;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,24:25:1:524,1,0
CP000253.1 2450979 . A G 540.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.63;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:569,39,0
CP000253.1 2450988 . T C 630.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:45:659,45,0
CP000253.1 2451033 . G A 365.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:394,27,0
CP000253.1 2451127 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:85,6,0
CP000253.1 2451582 . C T 446.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:475,33,0
CP000253.1 2451585 . T C 446.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:475,33,0
CP000253.1 2451588 . A C 441.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:470,33,0
CP000253.1 2451591 . A T 446.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:33:475,33,0
CP000253.1 2451594 . T C 450.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:479,33,0
CP000253.1 2451648 . G A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 2451843 . C T 918.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3163;MLEAC=2;MLEAF=1.00;MQ=44.90;MQ0=2;QD=16.41;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,56:56:72:947,72,0
CP000253.1 2451861 . A T 1088.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0272;MLEAC=2;MLEAF=1.00;MQ=41.94;MQ0=7;QD=15.33;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,71:71:84:1117,84,0
CP000253.1 2451899 . A G 1198.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3642;MLEAC=2;MLEAF=1.00;MQ=46.09;MQ0=6;QD=16.88;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,71:74:90:1227,90,0
CP000253.1 2451922 . A T 1353.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.631;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4394;MLEAC=2;MLEAF=1.00;MQ=47.93;MQ0=6;MQRankSum=-1.048;QD=18.05;ReadPosRankSum=0.054;SOR=0.849 GT:AD:DP:GQ:PL 1/1:2,73:75:65:1382,65,0
CP000253.1 2451938 . T C 1454.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3283;MLEAC=2;MLEAF=1.00;MQ=50.87;MQ0=6;QD=20.21;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1483,111,0
CP000253.1 2451960 . A G 1609.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7086;MLEAC=2;MLEAF=1.00;MQ=56.36;MQ0=3;QD=25.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1638,120,0
CP000253.1 2451967 . C G 1674.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8746;MLEAC=2;MLEAF=1.00;MQ=56.41;MQ0=3;QD=26.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,63:65:99:1703,126,0
CP000253.1 2451983 . A T 1637.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2012;MLEAC=2;MLEAF=1.00;MQ=58.05;MQ0=2;QD=26.42;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,62:63:99:1666,120,0
CP000253.1 2452130 . A G 2779.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.903;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3677;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.60;ReadPosRankSum=0.830;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,112:113:99:2808,199,0
CP000253.1 2452391 . A G 2468.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1190;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2497,172,0
CP000253.1 2453487 . C T 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 2453658 . T C 272.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:301,21,0
CP000253.1 2454300 . A G 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 2454456 . G A 2414.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2443,169,0
CP000253.1 2454710 . A G 1961.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1990,141,0
CP000253.1 2454714 . A G 1958.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1987,141,0
CP000253.1 2454755 . A C 1360.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1389,99,0
CP000253.1 2454848 . T A 556.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.490;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.20;ReadPosRankSum=-0.576;SOR=0.874 GT:AD:DP:GQ:PL 1/1:2,22:24:42:585,42,0
CP000253.1 2454875 . A T 352.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:381,27,0
CP000253.1 2455301 . C A 1782.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1087;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.01;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,81:82:99:1811,123,0
CP000253.1 2455416 . C T 764.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5908;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.49;ReadPosRankSum=0.579;SOR=0.392 GT:AD:DP:GQ:PL 1/1:1,29:30:60:793,60,0
CP000253.1 2455454 . G T 1307.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:96:1336,96,0
CP000253.1 2455473 . C T 2152.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9478;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2181,154,0
CP000253.1 2455476 . T G 2242.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8427;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2271,160,0
CP000253.1 2455486 . G A 2390.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2975;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2419,169,0
CP000253.1 2455501 . G A 2565.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3732;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,108:109:99:2594,184,0
CP000253.1 2455510 . A G 2654.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.740;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.13;ReadPosRankSum=-0.553;SOR=0.491 GT:AD:DP:GQ:PL 1/1:1,109:111:99:2683,190,0
CP000253.1 2455531 . A G 3201.82 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4754;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,130:133:99:3231,226,0
CP000253.1 2455567 . A G 3547.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.840;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.34;ReadPosRankSum=1.642;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,151:153:99:3576,250,0
CP000253.1 2455573 . T A 3582.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.781;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5588;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.97;ReadPosRankSum=-0.300;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,155:156:99:3611,247,0
CP000253.1 2455594 . C T 3707.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,160:161:99:3736,259,0
CP000253.1 2455600 . T G 3722.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.623;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0264;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.41;ReadPosRankSum=-0.773;SOR=0.113 GT:AD:DP:GQ:PL 1/1:2,157:159:99:3751,259,0
CP000253.1 2455603 . T C 3650.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.701;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5635;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.96;ReadPosRankSum=-0.283;SOR=0.244 GT:AD:DP:GQ:PL 1/1:1,158:159:99:3679,259,0
CP000253.1 2455605 . G A 3757.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9765;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,157:158:99:3786,262,0
CP000253.1 2455606 . T C 3777.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9765;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3806,262,0
CP000253.1 2455657 . G T 3964.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.912;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.05;ReadPosRankSum=-0.242;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,171:172:99:3993,274,0
CP000253.1 2455663 . C T 3781.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0478;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,166:166:99:3810,265,0
CP000253.1 2455673 . A G 3848.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3366;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,168:168:99:3877,268,0
CP000253.1 2455681 . T G 3919.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,171:171:99:3948,271,0
CP000253.1 2455696 . G A 3976.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1083;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,167:168:99:4005,274,0
CP000253.1 2455699 . G A 3801.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,168:168:99:3830,265,0
CP000253.1 2455788 . T C 2434.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0701;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2463,172,0
CP000253.1 2455806 . C T 2441.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0509;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2470,172,0
CP000253.1 2455824 . A G 2571.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2600,181,0
CP000253.1 2455854 . A G 2098.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8145;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2127,147,0
CP000253.1 2455855 . A T 2095.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2124,147,0
CP000253.1 2455858 . G A 2054.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6896;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,86:87:99:2083,144,0
CP000253.1 2455873 . T C 2234.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2263,157,0
CP000253.1 2455906 . T A 2082.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2111,147,0
CP000253.1 2455999 . A G 930.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:69:959,69,0
CP000253.1 2456056 . A G 534.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:42:563,42,0
CP000253.1 2456068 . T C 635.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.638;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.55;ReadPosRankSum=1.735;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,26:27:48:664,48,0
CP000253.1 2456221 . T C 1619.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,67:68:99:1648,117,0
CP000253.1 2456263 . A T 2177.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.432;DP=97;Dels=0.00;ExcessHet=3.0103;FS=3.366;HaplotypeScore=18.2773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.69;ReadPosRankSum=0.167;SOR=0.411 GT:AD:DP:GQ:PL 1/1:2,94:97:99:2206,135,0
CP000253.1 2456296 . T A 2672.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2701,190,0
CP000253.1 2456308 . A G 2593.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.822;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4139;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.58;ReadPosRankSum=0.757;SOR=0.430 GT:AD:DP:GQ:PL 1/1:1,109:111:99:2622,187,0
CP000253.1 2456317 . A G 2602.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2631,187,0
CP000253.1 2456335 . A T 2857.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,118:119:99:2886,202,0
CP000253.1 2456353 . T C 2798.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.75;ReadPosRankSum=0.916;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,122:124:99:2827,196,0
CP000253.1 2456404 . A T 3107.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4200;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=22.52;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3136,217,0
CP000253.1 2456425 . G A 3086.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5938;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=22.70;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3115,214,0
CP000253.1 2456434 . G A 3072.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0131;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=22.59;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3101,214,0
CP000253.1 2456467 . C T 2825.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2854,196,0
CP000253.1 2457048 . T G 491.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:520,36,0
CP000253.1 2457370 . C A 753.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:54:782,54,0
CP000253.1 2457645 . A G 670.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:699,48,0
CP000253.1 2457772 . T C 773.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5711;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:35:57:802,57,0
CP000253.1 2458734 . T A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2459813 . A G 1713.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.857;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=0.552;SOR=0.894 GT:AD:DP:GQ:PL 1/1:1,65:66:99:1742,123,0
CP000253.1 2460210 . C T 6246.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7843;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6275,442,0
CP000253.1 2460516 . A G 915.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3839;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.93;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:35:69:944,69,0
CP000253.1 2461173 . C T 1130.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1159,81,0
CP000253.1 2461326 . G A 1004.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1033,72,0
CP000253.1 2461344 . T G 1028.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.825;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.38;ReadPosRankSum=0.710;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,43:44:75:1057,75,0
CP000253.1 2461542 . C T 3691.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,145:146:99:3720,262,0
CP000253.1 2461545 . A C 3807.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4169;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=1.076 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3836,274,0
CP000253.1 2461565 . G A 4068.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7460;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4097,286,0
CP000253.1 2461664 . A G 5292.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,232:233:99:5321,367,0
CP000253.1 2461861 . G A 3991.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.983;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.79;ReadPosRankSum=0.958;SOR=0.638 GT:AD:DP:GQ:PL 1/1:1,160:161:99:4020,280,0
CP000253.1 2462546 . G A 3244.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6372;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=1.016 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3273,232,0
CP000253.1 2462945 . G A 4349.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4378,313,0
CP000253.1 2462996 . G A 3512.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,135:137:99:3541,253,0
CP000253.1 2463023 . A G 3335.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2141;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3364,241,0
CP000253.1 2463030 . T C 3615.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6245;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,137:138:99:3644,259,0
CP000253.1 2463053 . T C 3318.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0826;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.34;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3347,244,0
CP000253.1 2463173 . C T 2887.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2916,208,0
CP000253.1 2463263 . G A 3102.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.883;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4422;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.07;ReadPosRankSum=-0.058;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,118:119:99:3131,223,0
CP000253.1 2463314 . A G 2552.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.700;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.42;ReadPosRankSum=0.270;SOR=0.341 GT:AD:DP:GQ:PL 1/1:1,108:109:99:2581,184,0
CP000253.1 2463437 . A G 2183.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0690;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2212,157,0
CP000253.1 2463506 . C T 1669.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1698,120,0
CP000253.1 2463590 . C T 777.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:57:806,57,0
CP000253.1 2463605 . A T 638.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.77;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:48:667,48,0
CP000253.1 2463776 . G A 1962.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.26;SOR=1.073 GT:AD:DP:GQ:PL 1/1:0,72:75:99:1991,144,0
CP000253.1 2464632 . G A 6075.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.7714;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=25.42;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,239:243:99:6104,439,0
CP000253.1 2464677 . G A 6341.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.2757;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=26.31;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,241:245:99:6370,457,0
CP000253.1 2464743 . A T 5565.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.934;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4301;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;MQRankSum=-0.049;QD=26.76;ReadPosRankSum=-1.408;SOR=0.329 GT:AD:DP:GQ:PL 1/1:1,207:211:99:5594,406,0
CP000253.1 2464770 . T C 4700.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1054;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=26.41;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4729,346,0
CP000253.1 2465172 . C T 6008.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.4277;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.71;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,225:225:99:6037,433,0
CP000253.1 2465181 . G A 6056.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5462;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,229:230:99:6085,433,0
CP000253.1 2465184 . A T 5841.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.849;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6467;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.85;ReadPosRankSum=1.710;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,225:227:99:5870,418,0
CP000253.1 2465190 . G A 6431.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5911;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,244:244:99:6460,461,0
CP000253.1 2465217 . C T 6112.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2438;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,233:235:99:6141,436,0
CP000253.1 2465220 . T A 6180.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,237:237:99:6209,436,0
CP000253.1 2465226 . T C 6198.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9838;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,239:241:99:6227,442,0
CP000253.1 2465235 . T C 6362.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1615;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,242:242:99:6391,454,0
CP000253.1 2465238 . T C 6378.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.842;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.14;ReadPosRankSum=0.966;SOR=0.535 GT:AD:DP:GQ:PL 1/1:1,243:244:99:6407,454,0
CP000253.1 2465256 . C T 6477.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4940;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,247:249:99:6506,461,0
CP000253.1 2465280 . C A 6835.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.673;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2297;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=27.90;ReadPosRankSum=2.120;SOR=0.842 GT:AD:DP:GQ:PL 1/1:2,243:247:99:6864,497,0
CP000253.1 2465289 . C T 7052.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3284;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=28.55;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,247:248:99:7081,512,0
CP000253.1 2465301 . G A 6798.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.1070;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=27.75;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,245:248:99:6827,491,0
CP000253.1 2465310 . G A 6624.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.9101;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=27.38;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,242:242:99:6653,482,0
CP000253.1 2465313 . C G 6548.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2220;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=27.40;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,239:240:99:6577,482,0
CP000253.1 2465325 . C T 6714.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2646;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=27.41;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,245:246:99:6743,488,0
CP000253.1 2465328 . A C 6638.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.6529;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=27.21;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,244:245:99:6667,485,0
CP000253.1 2465340 . T C 6395.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.434;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.5463;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=25.79;ReadPosRankSum=-0.040;SOR=0.105 GT:AD:DP:GQ:PL 1/1:2,246:250:99:6424,460,0
CP000253.1 2465454 . A G 6075.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0264;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,233:233:99:6104,436,0
CP000253.1 2465459 . A G 5845.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,230:231:99:5874,415,0
CP000253.1 2465460 . G A 5815.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,230:231:99:5844,412,0
CP000253.1 2465466 . A G 5873.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,231:235:99:5902,418,0
CP000253.1 2465478 . T C 6153.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,232:233:99:6182,442,0
CP000253.1 2465480 . A G 5978.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.915;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.34;ReadPosRankSum=0.565;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,226:227:99:6007,427,0
CP000253.1 2465487 . T C 6098.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.29;ReadPosRankSum=-0.127;SOR=0.552 GT:AD:DP:GQ:PL 1/1:1,231:233:99:6127,433,0
CP000253.1 2465508 . A C 5992.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4266;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.83;ReadPosRankSum=0.082;SOR=0.611 GT:AD:DP:GQ:PL 1/1:1,231:232:99:6021,430,0
CP000253.1 2465520 . T C 5902.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5949;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,228:229:99:5931,421,0
CP000253.1 2465529 . T C 5756.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,221:223:99:5785,412,0
CP000253.1 2465541 . T C 5704.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.281;DP=216;Dels=0.00;ExcessHet=3.0103;FS=3.856;HaplotypeScore=8.9659;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.41;ReadPosRankSum=-0.116;SOR=0.689 GT:AD:DP:GQ:PL 1/1:3,213:216:99:5733,409,0
CP000253.1 2465544 . C A 5625.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,215:215:99:5654,403,0
CP000253.1 2465552 . C T 4062.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,151:152:99:4091,292,0
CP000253.1 2465553 . A T 4067.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.76;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4096,292,0
CP000253.1 2465556 . T C 4062.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4091,295,0
CP000253.1 2465559 . A T 4015.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4044,286,0
CP000253.1 2465564 . G T 4077.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4106,289,0
CP000253.1 2465565 . C T 4102.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.99;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4131,292,0
CP000253.1 2465571 . C T 4083.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=1.041 GT:AD:DP:GQ:PL 1/1:0,151:152:99:4112,292,0
CP000253.1 2465574 . T C 4108.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.03;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4137,295,0
CP000253.1 2465580 . T C 4111.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.05;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4140,295,0
CP000253.1 2465583 . A C 4089.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4118,292,0
CP000253.1 2465586 . T A 4053.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.67;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4082,289,0
CP000253.1 2465589 . A G 4123.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,156:156:99:4152,298,0
CP000253.1 2465694 . A G 3673.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.619;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9832;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=25.16;ReadPosRankSum=0.190;SOR=0.516 GT:AD:DP:GQ:PL 1/1:1,145:146:99:3702,268,0
CP000253.1 2465709 . C A 3784.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6783;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.10;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,145:147:99:3813,277,0
CP000253.1 2465802 . G A 3427.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8545;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.97;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3456,247,0
CP000253.1 2466335 . T C 6262.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.3119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6291,445,0
CP000253.1 2466654 . C T 3920.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.995;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2197;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.63;ReadPosRankSum=1.733;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,152:153:99:3949,280,0
CP000253.1 2466666 . T A 4044.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2959;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,162:163:99:4073,286,0
CP000253.1 2466780 . A T 4176.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.95;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:155:99:4205,298,0
CP000253.1 2467202 . T A 3821.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.180;DP=156;Dels=0.00;ExcessHet=3.0103;FS=3.388;HaplotypeScore=17.9935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.66;ReadPosRankSum=-0.841;SOR=0.317 GT:AD:DP:GQ:PL 1/1:2,153:156:99:3850,257,0
CP000253.1 2467689 . C T 338.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:367,27,0
CP000253.1 2467779 . A G 687.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.45;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:51:716,51,0
CP000253.1 2468082 . T C 5930.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7049;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,237:238:99:5959,415,0
CP000253.1 2468110 . T G 2326.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=76.5953;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.73;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2355,169,0
CP000253.1 2468111 . C A 2240.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=75.7286;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.36;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2269,166,0
CP000253.1 2468112 . A G 2301.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=75.7286;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.14;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2330,169,0
CP000253.1 2468114 . A C 2259.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=527.7135;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.60;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2288,166,0
CP000253.1 2468131 . G A 2299.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=83.5528;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.48;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2328,169,0
CP000253.1 2468135 . G A 2315.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.998;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=83.5528;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.31;ReadPosRankSum=0.939;SOR=0.430 GT:AD:DP:GQ:PL 1/1:2,77:79:99:2344,169,0
CP000253.1 2468148 . T C 3337.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7165;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3366,238,0
CP000253.1 2468150 . A C 3353.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.764;DP=131;Dels=0.00;ExcessHet=3.0103;FS=3.044;HaplotypeScore=3.5052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.60;ReadPosRankSum=1.001;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,130:131:99:3382,244,0
CP000253.1 2468153 . A T 3511.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5052;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3540,250,0
CP000253.1 2468159 . C G 3584.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.671;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.72;ReadPosRankSum=2.351;SOR=0.130 GT:AD:DP:GQ:PL 1/1:2,143:146:99:3613,256,0
CP000253.1 2468194 . A C 4375.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2251;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4404,310,0
CP000253.1 2468195 . A G 4270.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.757;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4370;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.54;ReadPosRankSum=1.176;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,172:174:99:4299,265,0
CP000253.1 2468198 . G A 4388.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4417,310,0
CP000253.1 2468201 . T C 4325.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4354,307,0
CP000253.1 2468203 . G C 4404.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4433,310,0
CP000253.1 2468206 . A G 4432.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4461,313,0
CP000253.1 2468210 . T C 4346.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4375,310,0
CP000253.1 2468211 . G C 4319.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4348,307,0
CP000253.1 2468212 . A C 4403.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4432,313,0
CP000253.1 2468215 . T C 4384.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4413,310,0
CP000253.1 2468285 . G A 5486.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.849;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6626;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.72;ReadPosRankSum=0.016;SOR=0.354 GT:AD:DP:GQ:PL 1/1:1,221:224:99:5515,388,0
CP000253.1 2468303 . T C 5480.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9121;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,216:218:99:5509,391,0
CP000253.1 2468315 . T G 4564.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.631;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=0.054;SOR=0.117 GT:AD:DP:GQ:PL 1/1:2,179:181:99:4593,296,0
CP000253.1 2468317 . T C 4678.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4707,334,0
CP000253.1 2468339 . T A 4688.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6138;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4717,334,0
CP000253.1 2468342 . C T 4648.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6205;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4677,331,0
CP000253.1 2468351 . A T 4669.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.47;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4698,337,0
CP000253.1 2468354 . T C 3842.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.25;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3871,277,0
CP000253.1 2468357 . T C 3734.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3763,274,0
CP000253.1 2468363 . G A 3915.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6426;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.58;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3944,283,0
CP000253.1 2468372 . C T 3777.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.18;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3806,274,0
CP000253.1 2468378 . G A 3476.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.819;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.14;ReadPosRankSum=1.108;SOR=0.520 GT:AD:DP:GQ:PL 1/1:1,132:134:99:3505,253,0
CP000253.1 2468380 . A C 3424.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.558;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.95;ReadPosRankSum=-0.923;SOR=0.140 GT:AD:DP:GQ:PL 1/1:2,130:132:99:3453,247,0
CP000253.1 2468381 . A G 3427.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,130:132:99:3456,247,0
CP000253.1 2468390 . C T 3723.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.901;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1363;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.41;ReadPosRankSum=0.443;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,140:141:99:3752,268,0
CP000253.1 2468441 . T C 3899.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.657;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6716;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=-0.211;QD=27.27;ReadPosRankSum=2.056;SOR=0.174 GT:AD:DP:GQ:PL 1/1:2,141:143:99:3928,280,0
CP000253.1 2468450 . T A 3159.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3888;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=28.21;SOR=1.262 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3188,229,0
CP000253.1 2468452 . T C 3037.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=27.62;SOR=1.274 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3066,223,0
CP000253.1 2468459 . T C 3020.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=28.23;SOR=1.322 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3049,220,0
CP000253.1 2468462 . C T 2955.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=27.88;SOR=1.300 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2984,217,0
CP000253.1 2468465 . A T 3038.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9916;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=28.67;SOR=1.300 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3067,220,0
CP000253.1 2468471 . C T 3439.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3262;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=28.19;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3468,250,0
CP000253.1 2468477 . A C 3401.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2203;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=27.88;SOR=1.207 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3430,247,0
CP000253.1 2468489 . T A 3260.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3497;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=26.73;SOR=1.207 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3289,235,0
CP000253.1 2468492 . G A 3376.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4831;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=27.68;SOR=1.207 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3405,247,0
CP000253.1 2468498 . T A 3304.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4831;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=27.09;SOR=1.160 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3333,241,0
CP000253.1 2468507 . C A 3426.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.947;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6158;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=-0.136;QD=27.20;ReadPosRankSum=-0.344;SOR=0.419 GT:AD:DP:GQ:PL 1/1:1,125:126:99:3455,247,0
CP000253.1 2468510 . T A 3166.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7396;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.75;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3195,232,0
CP000253.1 2468534 . A T 2504.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.391;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3809;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=-0.160;QD=27.52;ReadPosRankSum=1.426;SOR=1.022 GT:AD:DP:GQ:PL 1/1:2,89:91:99:2533,186,0
CP000253.1 2468547 . A G 3041.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=344.0769;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=27.65;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3070,223,0
CP000253.1 2468552 . G A 3080.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=27.75;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3109,226,0
CP000253.1 2468564 . C A 2991.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.71;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3020,223,0
CP000253.1 2468567 . A T 3132.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6544;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=27.97;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3161,226,0
CP000253.1 2468570 . A T 3204.83 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=27.63;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3236,232,0
CP000253.1 2468579 . C T 3312.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.826;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8490;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=-0.103;QD=25.88;ReadPosRankSum=1.629;SOR=0.248 GT:AD:DP:GQ:PL 1/1:1,127:128:99:3341,241,0
CP000253.1 2468585 . A G 3262.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.711;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7871;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=-0.103;QD=25.29;ReadPosRankSum=1.737;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,128:131:99:3291,241,0
CP000253.1 2468600 . T C 3319.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.766;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5994;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=-0.102;QD=25.34;ReadPosRankSum=1.525;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,130:131:99:3348,244,0
CP000253.1 2468603 . A C 3242.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2203;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=25.74;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3271,238,0
CP000253.1 2468624 . C T 3508.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.546;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0695;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;MQRankSum=-0.129;QD=25.43;ReadPosRankSum=0.812;SOR=0.753 GT:AD:DP:GQ:PL 1/1:2,136:139:99:3537,259,0
CP000253.1 2468642 . G T 3936.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1985;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=25.24;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3965,286,0
CP000253.1 2468666 . A G 4225.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9347;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=25.92;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,163:164:99:4254,307,0
CP000253.1 2468759 . A T 4682.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.745;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6262;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;MQRankSum=0.000;QD=26.61;ReadPosRankSum=-1.635;SOR=0.661 GT:AD:DP:GQ:PL 1/1:1,175:178:99:4711,340,0
CP000253.1 2468762 . G A 4688.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.821;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.0427;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=-0.054;QD=26.95;ReadPosRankSum=0.697;SOR=0.340 GT:AD:DP:GQ:PL 1/1:1,173:174:99:4717,343,0
CP000253.1 2468798 . C A 4703.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5876;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.57;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,177:180:99:4732,343,0
CP000253.1 2468822 . A T 4486.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.844;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8868;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=26.39;ReadPosRankSum=-1.458;SOR=0.317 GT:AD:DP:GQ:PL 1/1:1,169:172:99:4515,325,0
CP000253.1 2468854 . C T 4176.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5071;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.44;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,158:160:99:4205,298,0
CP000253.1 2468855 . C A 4206.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.490;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5499;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.056;QD=25.97;ReadPosRankSum=2.132;SOR=0.153 GT:AD:DP:GQ:PL 1/1:2,160:162:99:4235,304,0
CP000253.1 2468932 . A T 5300.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7461;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.50;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,200:200:99:5329,376,0
CP000253.1 2468938 . A C 5019.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6461;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=25.88;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,194:194:99:5048,364,0
CP000253.1 2468941 . T A 4981.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.793;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9199;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=-0.988;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,192:193:99:5010,358,0
CP000253.1 2468956 . T C 4857.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6401;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.12;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,186:187:99:4886,346,0
CP000253.1 2468965 . G A 4643.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4672,331,0
CP000253.1 2468968 . G A 4560.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4589,331,0
CP000253.1 2468971 . C T 4592.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4621,325,0
CP000253.1 2468974 . G A 4540.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4569,322,0
CP000253.1 2468977 . A G 4837.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.29;SOR=0.986 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4866,346,0
CP000253.1 2468989 . C A 5140.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,196:196:99:5169,367,0
CP000253.1 2469001 . C T 4981.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.158;DP=189;Dels=0.00;ExcessHet=3.0103;FS=3.765;HaplotypeScore=16.8630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.50;ReadPosRankSum=1.714;SOR=0.783 GT:AD:DP:GQ:PL 1/1:1,187:189:99:5010,326,0
CP000253.1 2469004 . T C 4960.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.115;DP=190;Dels=0.00;ExcessHet=3.0103;FS=3.757;HaplotypeScore=16.6181;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.11;ReadPosRankSum=1.733;SOR=0.777 GT:AD:DP:GQ:PL 1/1:1,189:190:99:4989,326,0
CP000253.1 2469007 . A T 4981.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,187:188:99:5010,355,0
CP000253.1 2469025 . G A 4759.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4788,340,0
CP000253.1 2469028 . T C 4824.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.36;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4853,346,0
CP000253.1 2469034 . G A 4987.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3265;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,190:190:99:5016,358,0
CP000253.1 2469049 . A G 4785.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5688;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,182:184:99:4814,349,0
CP000253.1 2469056 . T G 4849.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2278;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.94;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4878,349,0
CP000253.1 2469058 . G A 4882.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4911,349,0
CP000253.1 2469067 . T A 5024.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1294;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,187:187:99:5053,364,0
CP000253.1 2469079 . C T 5319.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.882 GT:AD:DP:GQ:PL 1/1:0,206:207:99:5348,388,0
CP000253.1 2469200 . C T 5602.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5452;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,213:213:99:5631,400,0
CP000253.1 2469211 . A C 5660.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.782;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.61;ReadPosRankSum=1.145;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,220:221:99:5689,409,0
CP000253.1 2469463 . A G 5417.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.795;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.9456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.68;ReadPosRankSum=1.650;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,210:212:99:5446,397,0
CP000253.1 2469796 . T C 4719.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9704;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=25.93;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,182:182:99:4748,343,0
CP000253.1 2469880 . C T 4642.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.579;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.96;ReadPosRankSum=1.732;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,185:187:99:4671,343,0
CP000253.1 2470111 . T A 5309.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.697;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3277;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.42;ReadPosRankSum=-1.276;SOR=0.352 GT:AD:DP:GQ:PL 1/1:1,200:203:99:5338,388,0
CP000253.1 2470609 . C A 2418.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2447,172,0
CP000253.1 2470753 . A T 4602.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.843;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4724;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.92;ReadPosRankSum=1.105;SOR=1.131 GT:AD:DP:GQ:PL 1/1:1,170:172:99:4631,328,0
CP000253.1 2470921 . C T 6563.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.7854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6592,473,0
CP000253.1 2470992 . G A 6514.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.3477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,243:250:99:6543,476,0
CP000253.1 2471014 . A T 6708.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0086;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.38;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,245:246:99:6737,485,0
CP000253.1 2471029 . T C 6469.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.2770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6498,472,0
CP000253.1 2471119 . T G 6093.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.619;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.2037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.08;ReadPosRankSum=-0.769;SOR=0.640 GT:AD:DP:GQ:PL 1/1:3,240:244:99:6122,444,0
CP000253.1 2471155 . A C 6274.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6169;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,241:242:99:6303,448,0
CP000253.1 2471347 . T G 3172.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.977;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=0.363;SOR=0.497 GT:AD:DP:GQ:PL 1/1:1,123:124:99:3201,229,0
CP000253.1 2471658 . T C 1033.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1062,75,0
CP000253.1 2471898 . T A 4269.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.767;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4104;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.26;ReadPosRankSum=0.364;SOR=0.542 GT:AD:DP:GQ:PL 1/1:1,175:176:99:4298,301,0
CP000253.1 2471901 . C A 4145.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.542;DP=172;Dels=0.00;ExcessHet=3.0103;FS=3.522;HaplotypeScore=13.5712;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.24;ReadPosRankSum=1.308;SOR=0.471 GT:AD:DP:GQ:PL 1/1:2,169:172:99:4174,295,0
CP000253.1 2471904 . C T 4279.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6106;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4308,304,0
CP000253.1 2471907 . G A 4323.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4352,304,0
CP000253.1 2471908 . C T 4289.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4318,301,0
CP000253.1 2471913 . T C 4395.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5700;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4424,313,0
CP000253.1 2471921 . T G 4855.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.950;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2331;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=0.835;SOR=0.563 GT:AD:DP:GQ:PL 1/1:1,194:195:99:4884,340,0
CP000253.1 2471961 . C A 5216.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.727;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5172;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.38;ReadPosRankSum=-0.235;SOR=0.516 GT:AD:DP:GQ:PL 1/1:1,213:215:99:5245,370,0
CP000253.1 2472572 . T C 2513.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4105;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2542,181,0
CP000253.1 2472901 . A G 1559.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.9281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1588,114,0
CP000253.1 2473032 . T C 624.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:653,45,0
CP000253.1 2473033 . C T 614.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:45:643,45,0
CP000253.1 2473490 . G A 2967.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,131:131:99:2996,205,0
CP000253.1 2474004 . C T 1749.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1778,123,0
CP000253.1 2474307 . G A 89.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:117,9,0
CP000253.1 2474467 . C T 92.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0
CP000253.1 2475013 . C T 1789.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1818,126,0
CP000253.1 2475019 . G T 1725.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1754,123,0
CP000253.1 2475022 . A G 1681.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8499;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1710,120,0
CP000253.1 2475028 . G C 1568.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1597,114,0
CP000253.1 2475029 . T C 1633.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1662,117,0
CP000253.1 2475059 . G T 1593.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1622,114,0
CP000253.1 2475216 . T C 420.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:33:449,33,0
CP000253.1 2475342 . C T 1687.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0378;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.21;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:77:99:1716,117,0
CP000253.1 2475876 . G A 1589.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1618,111,0
CP000253.1 2475879 . A G 1594.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1623,111,0
CP000253.1 2475951 . A C 805.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:57:834,57,0
CP000253.1 2476176 . G A 441.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:470,33,0
CP000253.1 2476208 . A G 753.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:57:782,57,0
CP000253.1 2476242 . G A 772.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:57:801,57,0
CP000253.1 2476479 . T C 2541.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5812;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2570,181,0
CP000253.1 2476558 . A C 3151.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1396;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3180,220,0
CP000253.1 2477178 . G T 41.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0
CP000253.1 2477381 . C T 2107.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.399;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4276;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.19;ReadPosRankSum=0.456;SOR=0.299 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2136,116,0
CP000253.1 2477856 . C T 446.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.27;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:475,33,0
CP000253.1 2477923 . G A 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 2477942 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2477954 . G T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2477977 . G T 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 2478459 . C T 1082.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.10;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:75:1111,75,0
CP000253.1 2478487 . A G 935.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.28;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:66:964,66,0
CP000253.1 2478581 . A G 500.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:529,36,0
CP000253.1 2479177 . T C 587.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.77;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:42:616,42,0
CP000253.1 2480311 . T A 5421.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4568;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,224:224:99:5450,379,0
CP000253.1 2480513 . T A 2149.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3756;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,87:89:99:2178,154,0
CP000253.1 2480519 . G A 2056.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1240;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2085,147,0
CP000253.1 2480545 . C T 1436.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.258;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.45;ReadPosRankSum=0.054;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,63:64:71:1465,71,0
CP000253.1 2480685 . A T 2181.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7153;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2210,157,0
CP000253.1 2480844 . A T 367.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.462;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.723;HaplotypeScore=12.3850;MLEAC=1;MLEAF=0.500;MQ=59.94;MQ0=0;MQRankSum=-4.516;QD=1.97;ReadPosRankSum=-8.412;SOR=0.606 GT:AD:DP:GQ:PL 0/1:156,31:187:99:396,0,3531
CP000253.1 2480865 . A G 359.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.311;DP=196;Dels=0.00;ExcessHet=3.0103;FS=1.525;HaplotypeScore=16.8137;MLEAC=1;MLEAF=0.500;MQ=59.94;MQ0=0;MQRankSum=-4.528;QD=1.85;ReadPosRankSum=-5.813;SOR=0.557 GT:AD:DP:GQ:PL 0/1:162,32:196:99:388,0,3672
CP000253.1 2481042 . A G 3286.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3315,235,0
CP000253.1 2482614 . G A 1153.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1182,84,0
CP000253.1 2482647 . C A 1309.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:93:1338,93,0
CP000253.1 2482675 . C T 1040.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1069,75,0
CP000253.1 2482707 . G A 976.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5130;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:41:69:1005,69,0
CP000253.1 2482911 . A C 526.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.26;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:42:555,42,0
CP000253.1 2483082 . G A 3254.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9916;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=1.117 GT:AD:DP:GQ:PL 1/1:0,127:129:99:3283,235,0
CP000253.1 2483157 . A G 4955.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,197:199:99:4984,352,0
CP000253.1 2483340 . A C 4882.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8465;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,204:204:99:4911,343,0
CP000253.1 2483799 . C A 1703.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.069;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=1.420;SOR=0.572 GT:AD:DP:GQ:PL 1/1:1,65:66:99:1732,123,0
CP000253.1 2483844 . A T 1733.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.762;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.08;ReadPosRankSum=-0.482;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,71:72:99:1762,123,0
CP000253.1 2483940 . T C 2186.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,85:86:99:2215,157,0
CP000253.1 2484523 . T A 545.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:39:574,39,0
CP000253.1 2484583 . T C 549.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:578,39,0
CP000253.1 2484872 . C T 1818.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.15;SOR=1.410 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1847,132,0
CP000253.1 2485660 . T G 169.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.24;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:198,15,0
CP000253.1 2485697 . A G 162.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:191,15,0
CP000253.1 2486161 . C T 5743.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.918;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0368;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.55;ReadPosRankSum=1.733;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,233:236:99:5772,406,0
CP000253.1 2486503 . A G 2055.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2084,147,0
CP000253.1 2486798 . G C 366.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.55;MQ0=0;QD=20.38;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:27:395,27,0
CP000253.1 2486810 . C T 408.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.30;MQ0=0;QD=20.44;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:30:437,30,0
CP000253.1 2486820 . T G 401.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.30;MQ0=0;QD=20.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:30:430,30,0
CP000253.1 2486866 . A T 334.90 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.641;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=52.02;MQ0=0;MQRankSum=-1.031;QD=15.95;ReadPosRankSum=2.407;SOR=0.793 GT:AD:DP:GQ:PL 0/1:2,19:21:15:363,0,15
CP000253.1 2486981 . T C 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2486989 . G C 86.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.303;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9998;MLEAC=1;MLEAF=0.500;MQ=58.32;MQ0=0;MQRankSum=-0.366;QD=12.40;ReadPosRankSum=1.465;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:33:115,0,33
CP000253.1 2486991 . A G 93.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9998;MLEAC=1;MLEAF=0.500;MQ=58.32;MQ0=0;MQRankSum=1.465;QD=13.40;ReadPosRankSum=0.792;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,6:7:29:122,0,29
CP000253.1 2487001 . C T 1039.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.219;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7853;MLEAC=2;MLEAF=1.00;MQ=57.42;MQ0=0;MQRankSum=-0.428;QD=20.80;ReadPosRankSum=-2.546;SOR=0.776 GT:AD:DP:GQ:PL 1/1:2,48:50:36:1068,36,0
CP000253.1 2487011 . T G 1182.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6522;MLEAC=2;MLEAF=1.00;MQ=57.52;MQ0=0;QD=22.75;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:84:1211,84,0
CP000253.1 2487039 . A G 1133.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.041;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=57.14;MQ0=0;MQRankSum=-0.452;QD=20.25;ReadPosRankSum=-2.371;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,54:56:43:1162,43,0
CP000253.1 2487041 . A G 1111.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.462;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=57.25;MQ0=0;MQRankSum=-0.448;QD=19.50;ReadPosRankSum=-2.316;SOR=0.729 GT:AD:DP:GQ:PL 1/1:2,55:58:40:1140,40,0
CP000253.1 2487053 . G T 1207.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.029;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=57.34;MQ0=0;MQRankSum=-0.435;QD=20.13;ReadPosRankSum=-2.313;SOR=0.762 GT:AD:DP:GQ:PL 1/1:2,58:60:46:1236,46,0
CP000253.1 2487080 . A C 1545.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=57.76;MQ0=0;QD=21.77;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1574,108,0
CP000253.1 2487109 . A G 1683.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=58.32;MQ0=0;QD=22.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1712,117,0
CP000253.1 2487163 . T C 1381.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.759;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.93;ReadPosRankSum=1.314;SOR=0.793 GT:AD:DP:GQ:PL 1/1:2,61:63:58:1410,58,0
CP000253.1 2487433 . G T 1097.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.747;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.96;ReadPosRankSum=1.318;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,49:50:78:1126,78,0
CP000253.1 2487946 . T C 3986.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.679;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2786;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.02;ReadPosRankSum=1.002;SOR=0.399 GT:AD:DP:GQ:PL 1/1:1,165:168:99:4015,283,0
CP000253.1 2487955 . C T 4220.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,171:172:99:4249,298,0
CP000253.1 2488150 . T A 2775.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2804,199,0
CP000253.1 2488233 . T C 1932.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=1.134 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1961,138,0
CP000253.1 2488264 . T C 1717.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1746,123,0
CP000253.1 2488748 . C T 394.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:423,30,0
CP000253.1 2488771 . T C 525.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:554,39,0
CP000253.1 2488790 . A G 629.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:29:45:658,45,0
CP000253.1 2488791 . C T 632.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.82;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:661,45,0
CP000253.1 2488803 . C T 598.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:42:627,42,0
CP000253.1 2488823 . C T 773.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:54:802,54,0
CP000253.1 2488842 . C T 945.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:66:974,66,0
CP000253.1 2488849 . T C 944.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.97;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:973,69,0
CP000253.1 2488935 . T A 1543.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1572,108,0
CP000253.1 2488955 . C A 1546.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.75;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1575,108,0
CP000253.1 2488967 . T C 1427.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1456,99,0
CP000253.1 2489006 . A G 1187.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:84:1216,84,0
CP000253.1 2489022 . G A 937.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:966,66,0
CP000253.1 2489034 . A C 738.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:54:767,54,0
CP000253.1 2489339 . C T 406.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:435,30,0
CP000253.1 2489477 . T C 240.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:269,18,0
CP000253.1 2489591 . T C 370.78 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6145;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.51;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:27:399,27,0
CP000253.1 2489804 . C T 2722.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5116;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.158 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2751,193,0
CP000253.1 2489877 . C A 3628.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.040;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4297;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.19;ReadPosRankSum=0.092;SOR=0.331 GT:AD:DP:GQ:PL 1/1:1,149:150:99:3657,253,0
CP000253.1 2489904 . C T 4128.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7349;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,175:177:99:4157,286,0
CP000253.1 2490172 . C T 2298.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2327,163,0
CP000253.1 2490220 . A T 1187.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1216,84,0
CP000253.1 2490249 . T A 129.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:157,12,0
CP000253.1 2490296 . T C 82.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:110,9,0
CP000253.1 2490306 . A C 89.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:117,9,0
CP000253.1 2490311 . T G 49.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0
CP000253.1 2490339 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2490341 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2490348 . C G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2490370 . A C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2490384 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2490391 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2490425 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2490458 . A T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2490459 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2490583 . C T 273.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:302,21,0
CP000253.1 2490667 . C T 267.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:296,21,0
CP000253.1 2490747 . A G 374.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:403,30,0
CP000253.1 2490815 . T C 486.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.655;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.28;ReadPosRankSum=-0.507;SOR=0.340 GT:AD:DP:GQ:PL 1/1:1,23:24:39:515,39,0
CP000253.1 2490926 . A G 591.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.92;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:29:42:620,42,0
CP000253.1 2490954 . T C 455.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8857;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.70;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:484,33,0
CP000253.1 2491189 . G A 1648.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8772;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.59;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,62:64:99:1677,120,0
CP000253.1 2491334 . C A 4489.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.909;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5101;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.01;ReadPosRankSum=0.908;SOR=0.615 GT:AD:DP:GQ:PL 1/1:1,186:188:99:4518,316,0
CP000253.1 2491415 . A T 5197.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.18;ReadPosRankSum=-1.176;SOR=0.499 GT:AD:DP:GQ:PL 1/1:1,214:217:99:5226,370,0
CP000253.1 2491598 . T C 3957.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,161:164:99:3986,280,0
CP000253.1 2491619 . G T 3653.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8778;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3682,259,0
CP000253.1 2491839 . A G 595.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,24:24:45:624,45,0
CP000253.1 2492716 . T G 653.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:682,48,0
CP000253.1 2492871 . C A 250.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:279,21,0
CP000253.1 2492944 . G A 305.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:334,24,0
CP000253.1 2492979 . C T 970.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.68;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:69:999,69,0
CP000253.1 2492980 . T C 961.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:69:990,69,0
CP000253.1 2492991 . G C 1371.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1400,96,0
CP000253.1 2492995 . A T 1371.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1400,96,0
CP000253.1 2493001 . T A 1363.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1392,96,0
CP000253.1 2493003 . A G 1368.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1397,96,0
CP000253.1 2493004 . T C 1326.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1355,93,0
CP000253.1 2493707 . G A 704.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8920;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:51:733,51,0
CP000253.1 2494668 . T C 1519.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1548,105,0
CP000253.1 2494996 . T A 4547.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.447 GT:AD:DP:GQ:PL 1/1:0,169:171:99:4576,328,0
CP000253.1 2495047 . T C 4806.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=1.337 GT:AD:DP:GQ:PL 1/1:0,188:188:99:4835,349,0
CP000253.1 2495797 . T C 1213.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1242,87,0
CP000253.1 2496131 . A T 3140.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3169,220,0
CP000253.1 2496401 . C A 2614.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.565;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.63;ReadPosRankSum=1.268;SOR=0.248 GT:AD:DP:GQ:PL 1/1:2,100:102:99:2643,190,0
CP000253.1 2496427 . C T 2213.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2792;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2242,162,0
CP000253.1 2496442 . T G 2200.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7630;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2229,160,0
CP000253.1 2496752 . C A 1995.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2024,141,0
CP000253.1 2497142 . T C 2597.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6070;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2626,184,0
CP000253.1 2497449 . C A 485.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:514,36,0
CP000253.1 2497523 . G T 849.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:60:878,60,0
CP000253.1 2497547 . T C 888.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:63:917,63,0
CP000253.1 2497869 . C T 1417.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1446,99,0
CP000253.1 2497910 . T C 1324.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1518;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:93:1353,93,0
CP000253.1 2497917 . T A 1309.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:58:93:1338,93,0
CP000253.1 2498018 . C G 393.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9801;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.88;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:422,30,0
CP000253.1 2498030 . A G 304.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7581;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.77;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:333,24,0
CP000253.1 2498119 . A T 484.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:513,36,0
CP000253.1 2498159 . A G 424.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:19:33:453,33,0
CP000253.1 2498167 . A C 451.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:480,33,0
CP000253.1 2498169 . G A 449.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:478,33,0
CP000253.1 2498174 . C T 445.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:474,33,0
CP000253.1 2498198 . A T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 2498241 . T C 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 2498266 . C G 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2498358 . C T 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2498383 . A G 352.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:381,27,0
CP000253.1 2499243 . C T 1160.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.167;DP=52;Dels=0.00;ExcessHet=3.0103;FS=3.458;HaplotypeScore=0.9997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.32;ReadPosRankSum=-1.534;SOR=0.669 GT:AD:DP:GQ:PL 1/1:1,51:52:47:1189,47,0
CP000253.1 2499780 . C T 538.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.45;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:567,39,0
CP000253.1 2499781 . G A 499.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.82;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:36:528,36,0
CP000253.1 2499784 . C T 530.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:559,39,0
CP000253.1 2499796 . A G 629.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:658,45,0
CP000253.1 2499810 . A G 624.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.54;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:45:653,45,0
CP000253.1 2499814 . G T 581.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.55;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:610,42,0
CP000253.1 2500472 . A G 3286.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3315,229,0
CP000253.1 2500864 . T A 1169.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,47:47:87:1198,87,0
CP000253.1 2501398 . C T 495.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:22:36:524,36,0
CP000253.1 2501665 . A G 496.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:525,36,0
CP000253.1 2501775 . C T 451.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:480,33,0
CP000253.1 2501823 . T C 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 2501854 . T G 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 2501866 . A T 359.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:388,27,0
CP000253.1 2501991 . T C 402.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:431,30,0
CP000253.1 2502071 . T C 121.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:149,12,0
CP000253.1 2502297 . C G 431.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:460,33,0
CP000253.1 2502304 . T C 438.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:467,33,0
CP000253.1 2502307 . G T 438.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:467,33,0
CP000253.1 2502309 . A G 430.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:459,33,0
CP000253.1 2502316 . T A 438.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:467,33,0
CP000253.1 2502323 . T A 387.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:416,30,0
CP000253.1 2502338 . A G 486.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:515,36,0
CP000253.1 2502514 . C T 407.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:33:436,33,0
CP000253.1 2502681 . T A 1660.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7133;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1689,117,0
CP000253.1 2502720 . G A 1664.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1693,117,0
CP000253.1 2502773 . C T 1009.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3409;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:72:1038,72,0
CP000253.1 2502814 . G A 391.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:420,30,0
CP000253.1 2502816 . C T 392.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:421,30,0
CP000253.1 2502818 . T C 389.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:418,30,0
CP000253.1 2502819 . A G 390.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:16:30:419,30,0
CP000253.1 2502827 . T C 399.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:428,30,0
CP000253.1 2502828 . T G 388.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.675;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.30;ReadPosRankSum=-0.870;SOR=0.829 GT:AD:DP:GQ:PL 1/1:1,15:16:30:417,30,0
CP000253.1 2502857 . G A 578.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:25:42:607,42,0
CP000253.1 2502886 . T C 750.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.831;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5353;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.75;ReadPosRankSum=-0.265;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,32:33:54:779,54,0
CP000253.1 2502908 . A C 744.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:54:773,54,0
CP000253.1 2502910 . T C 776.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:57:805,57,0
CP000253.1 2502917 . A T 931.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.89;ReadPosRankSum=-1.073;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,38:39:69:960,69,0
CP000253.1 2502926 . T C 893.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:38:66:922,66,0
CP000253.1 2502935 . T C 913.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:66:942,66,0
CP000253.1 2502962 . T A 1039.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1068,75,0
CP000253.1 2503076 . T C 545.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:574,39,0
CP000253.1 2503272 . A G 2938.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,130:130:99:2967,202,0
CP000253.1 2503283 . G C 2926.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,128:128:99:2955,205,0
CP000253.1 2503325 . A T 2953.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:129:99:2982,205,0
CP000253.1 2503327 . G A 2946.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:2975,205,0
CP000253.1 2503338 . T C 2955.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=59.83;MQ0=0;QD=22.56;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,131:131:99:2984,205,0
CP000253.1 2503375 . C T 2684.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7967;MLEAC=2;MLEAF=1.00;MQ=59.81;MQ0=0;QD=22.19;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2713,184,0
CP000253.1 2503591 . T A 2047.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2889;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:83:99:2076,147,0
CP000253.1 2505916 . A C 3124.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8531;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3153,220,0
CP000253.1 2505985 . T A 3526.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.810;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9607;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.74;ReadPosRankSum=0.013;SOR=0.288 GT:AD:DP:GQ:PL 1/1:1,136:139:99:3555,253,0
CP000253.1 2506018 . C T 3663.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.908;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=1.699;SOR=0.274 GT:AD:DP:GQ:PL 1/1:1,153:154:99:3692,265,0
CP000253.1 2506171 . T C 3055.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3084,217,0
CP000253.1 2506243 . A T 1654.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1683,117,0
CP000253.1 2506429 . A G 1331.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3163;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1360,96,0
CP000253.1 2506531 . G A 2135.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8872;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2164,150,0
CP000253.1 2506805 . A G 2194.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2223,154,0
CP000253.1 2506829 . G A 2364.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2393,166,0
CP000253.1 2506833 . G C 2448.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2477,175,0
CP000253.1 2506862 . G T 2555.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4089;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2584,181,0
CP000253.1 2506867 . G T 2557.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3030;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2586,181,0
CP000253.1 2506980 . C T 4145.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4174,289,0
CP000253.1 2507105 . T G 4587.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.655;DP=205;Dels=0.00;ExcessHet=3.0103;FS=3.055;HaplotypeScore=12.5449;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=14.353;QD=22.38;ReadPosRankSum=0.896;SOR=0.286 GT:AD:DP:GQ:PL 1/1:1,204:205:99:4616,291,0
CP000253.1 2507167 . A G 4434.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,191:191:99:4463,313,0
CP000253.1 2507248 . T C 3268.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.760;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.14;ReadPosRankSum=0.453;SOR=0.607 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3297,235,0
CP000253.1 2507263 . T G 2806.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2835,202,0
CP000253.1 2507572 . C T 2811.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8431;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2840,202,0
CP000253.1 2507761 . G C 5231.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,214:217:99:5260,367,0
CP000253.1 2507827 . T C 5063.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.9893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,205:211:99:5092,364,0
CP000253.1 2508061 . G A 4990.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2582;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,203:203:99:5019,349,0
CP000253.1 2508103 . G A 4403.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,169:170:99:4432,316,0
CP000253.1 2508295 . T C 4306.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6642;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,175:176:99:4335,304,0
CP000253.1 2508415 . C T 5019.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.519;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.5312;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=-0.049;QD=24.25;ReadPosRankSum=0.071;SOR=0.871 GT:AD:DP:GQ:PL 1/1:2,205:207:99:5048,355,0
CP000253.1 2508604 . C A 5893.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.842;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2095;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;MQRankSum=0.000;QD=24.66;ReadPosRankSum=1.551;SOR=0.386 GT:AD:DP:GQ:PL 1/1:1,238:239:99:5922,421,0
CP000253.1 2508606 . C G 5962.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3491;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=25.16;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,237:238:99:5991,421,0
CP000253.1 2508607 . A T 5944.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.758;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4332;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;MQRankSum=-0.046;QD=24.98;ReadPosRankSum=1.640;SOR=0.320 GT:AD:DP:GQ:PL 1/1:2,236:238:99:5973,418,0
CP000253.1 2508649 . G A 5902.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,233:235:99:5931,421,0
CP000253.1 2508652 . A T 6122.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6151,433,0
CP000253.1 2508664 . G T 5998.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,237:238:99:6027,424,0
CP000253.1 2508718 . A G 4435.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3271;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4464,316,0
CP000253.1 2508787 . T A 3909.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.761;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.75;ReadPosRankSum=-1.502;SOR=0.713 GT:AD:DP:GQ:PL 1/1:1,157:160:99:3938,277,0
CP000253.1 2508868 . C T 2839.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.846;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.58;ReadPosRankSum=1.515;SOR=0.771 GT:AD:DP:GQ:PL 1/1:1,110:112:99:2868,202,0
CP000253.1 2508998 . T A 481.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:510,36,0
CP000253.1 2509327 . A G 1480.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1509,108,0
CP000253.1 2509732 . G T 4700.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.899;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2083;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.41;ReadPosRankSum=0.553;SOR=0.338 GT:AD:DP:GQ:PL 1/1:1,184:187:99:4729,331,0
CP000253.1 2509846 . T C 3399.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8749;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.45;ReadPosRankSum=1.375;SOR=0.357 GT:AD:DP:GQ:PL 1/1:1,144:145:99:3428,238,0
CP000253.1 2509861 . T A 3337.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.638;DP=137;Dels=0.00;ExcessHet=3.0103;FS=3.411;HaplotypeScore=20.8552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.54;ReadPosRankSum=0.383;SOR=0.538 GT:AD:DP:GQ:PL 1/1:1,135:137:99:3366,236,0
CP000253.1 2509877 . T C 3260.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.52;ReadPosRankSum=0.548;SOR=0.624 GT:AD:DP:GQ:PL 1/1:1,132:135:99:3289,232,0
CP000253.1 2510110 . A G 1723.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4921;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1752,123,0
CP000253.1 2510125 . T C 1769.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2025;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1798,126,0
CP000253.1 2510572 . G A 528.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:39:557,39,0
CP000253.1 2510991 . A G 1946.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=1.319 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1975,141,0
CP000253.1 2511027 . G A 2022.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3350;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,79:80:99:2051,144,0
CP000253.1 2511876 . G A 3049.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3078,211,0
CP000253.1 2511909 . A T 3122.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3151,217,0
CP000253.1 2511933 . C G 3119.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9694;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3148,217,0
CP000253.1 2512173 . C A 1530.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1559,105,0
CP000253.1 2512279 . G A 526.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:555,39,0
CP000253.1 2512377 . A G 1745.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1774,120,0
CP000253.1 2512518 . T C 1908.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.72;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:85:99:1937,132,0
CP000253.1 2512794 . T C 4023.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,177:178:99:4052,277,0
CP000253.1 2512927 . G A 1983.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9559;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,87:89:99:2012,141,0
CP000253.1 2512994 . A G 630.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:48:659,48,0
CP000253.1 2513207 . G T 2491.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2520,175,0
CP000253.1 2513639 . A T 2112.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.48;ReadPosRankSum=1.559;SOR=0.403 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2141,147,0
CP000253.1 2513744 . C A 1360.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=1.201 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1389,99,0
CP000253.1 2513825 . C T 847.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.23;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:63:876,63,0
CP000253.1 2514046 . A T 3995.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3153;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4024,277,0
CP000253.1 2514125 . C T 3969.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5855;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,173:173:99:3998,274,0
CP000253.1 2514134 . T A 4146.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.492;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.04;ReadPosRankSum=0.573;SOR=0.390 GT:AD:DP:GQ:PL 1/1:2,178:180:99:4175,292,0
CP000253.1 2514146 . C T 3658.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.9974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,158:159:99:3687,256,0
CP000253.1 2514188 . C T 3279.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3308,232,0
CP000253.1 2514194 . C T 3218.75 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3247,226,0
CP000253.1 2514215 . T A 2787.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6236;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2816,196,0
CP000253.1 2514721 . G A 2493.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2522,172,0
CP000253.1 2515239 . C A 788.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:33:60:817,60,0
CP000253.1 2515399 . G T 2022.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:87:99:2051,141,0
CP000253.1 2515464 . C A 2023.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2841;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:89:99:2052,141,0
CP000253.1 2515582 . T C 1751.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1780,123,0
CP000253.1 2515583 . T G 1730.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1759,123,0
CP000253.1 2515585 . T C 1704.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1733,120,0
CP000253.1 2515588 . G A 1727.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1756,120,0
CP000253.1 2515593 . G A 1746.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1775,123,0
CP000253.1 2515594 . C T 1727.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1756,120,0
CP000253.1 2515623 . A G 1773.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1802,126,0
CP000253.1 2515805 . T A 2460.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2489,172,0
CP000253.1 2515834 . T C 2565.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2594,178,0
CP000253.1 2516005 . T A 1946.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1975,135,0
CP000253.1 2516044 . C G 1745.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6292;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1774,123,0
CP000253.1 2516095 . A C 1503.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1532,108,0
CP000253.1 2516152 . A G 1394.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1423,102,0
CP000253.1 2516248 . G A 1659.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1688,117,0
CP000253.1 2516266 . T C 1505.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1534,108,0
CP000253.1 2516402 . T C 2048.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2077,144,0
CP000253.1 2516405 . T A 2012.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2041,141,0
CP000253.1 2516407 . A T 1999.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2028,141,0
CP000253.1 2516414 . A T 2041.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2070,144,0
CP000253.1 2516426 . T A 2136.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.01;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2165,151,0
CP000253.1 2516715 . A G 1059.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:78:1088,78,0
CP000253.1 2516729 . G T 1179.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1957;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:46:87:1208,87,0
CP000253.1 2516793 . C T 1702.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3376;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1731,123,0
CP000253.1 2517051 . G A 5298.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6364;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,214:214:99:5327,373,0
CP000253.1 2517101 . A G 5353.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,224:224:99:5382,376,0
CP000253.1 2517135 . G A 4906.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.327;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.2510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.82;ReadPosRankSum=1.851;SOR=0.115 GT:AD:DP:GQ:PL 1/1:2,213:216:99:4935,349,0
CP000253.1 2517257 . G A 4562.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.967;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.53;ReadPosRankSum=1.714;SOR=0.452 GT:AD:DP:GQ:PL 1/1:1,185:188:99:4591,319,0
CP000253.1 2517327 . A G 3175.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.993 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3204,226,0
CP000253.1 2517416 . C T 1232.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.839;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.17;ReadPosRankSum=1.462;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,50:51:90:1261,90,0
CP000253.1 2517957 . T C 696.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:51:725,51,0
CP000253.1 2518182 . C T 1890.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1919,135,0
CP000253.1 2518606 . G C 5388.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9299;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5417,385,0
CP000253.1 2518946 . C T 3100.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,124:125:99:3129,220,0
CP000253.1 2519024 . A G 2225.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,87:88:99:2254,160,0
CP000253.1 2519163 . C T 2447.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2476,175,0
CP000253.1 2519217 . C T 2352.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7118;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2381,166,0
CP000253.1 2519220 . A G 2105.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7118;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:89:99:2134,153,0
CP000253.1 2519477 . T C 2152.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.966;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.92;ReadPosRankSum=-1.463;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2181,154,0
CP000253.1 2519628 . A T 691.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:51:720,51,0
CP000253.1 2520069 . T G 1648.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1677,120,0
CP000253.1 2520539 . T C 158.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:187,15,0
CP000253.1 2521678 . C G 4406.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.897;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.2853;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.26;ReadPosRankSum=-1.256;SOR=0.800 GT:AD:DP:GQ:PL 1/1:4,194:199:99:4435,272,0
CP000253.1 2521728 . A T 5229.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,197:197:99:5258,373,0
CP000253.1 2521915 . G A 6699.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2473;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6728,482,0
CP000253.1 2522008 . T G 6460.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.943;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.37;ReadPosRankSum=1.379;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,244:246:99:6489,466,0
CP000253.1 2522031 . T C 6474.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,244:245:99:6503,464,0
CP000253.1 2522176 . G A 4827.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.842;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.82;ReadPosRankSum=-1.271;SOR=0.405 GT:AD:DP:GQ:PL 1/1:1,179:184:99:4856,349,0
CP000253.1 2522951 . G A 3778.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.872;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.47;ReadPosRankSum=-0.215;SOR=0.384 GT:AD:DP:GQ:PL 1/1:1,160:162:99:3807,262,0
CP000253.1 2523066 . C T 3548.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2471;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3577,250,0
CP000253.1 2523077 . G A 3575.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3604,253,0
CP000253.1 2523111 . T C 3001.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9529;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3030,214,0
CP000253.1 2523148 . A G 2965.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2994,211,0
CP000253.1 2523187 . C T 2752.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2781,196,0
CP000253.1 2523190 . T C 2549.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2578,184,0
CP000253.1 2523192 . G T 2591.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2620,187,0
CP000253.1 2523403 . T C 2686.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2715,196,0
CP000253.1 2523424 . G A 2860.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,112:113:99:2889,205,0
CP000253.1 2523427 . G A 2949.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=1.035 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2978,214,0
CP000253.1 2523433 . C A 3324.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.033 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3353,238,0
CP000253.1 2523436 . T C 3367.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3396,241,0
CP000253.1 2523442 . T A 3538.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.940;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=1.721;SOR=0.700 GT:AD:DP:GQ:PL 1/1:1,140:141:99:3567,253,0
CP000253.1 2523448 . T C 3568.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6002;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.996 GT:AD:DP:GQ:PL 1/1:0,141:142:99:3597,256,0
CP000253.1 2523577 . C T 4965.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.823;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7129;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.87;ReadPosRankSum=-1.367;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,207:210:99:4994,349,0
CP000253.1 2523796 . A G 3261.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2137;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.68;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3290,235,0
CP000253.1 2523907 . C T 3772.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3801,271,0
CP000253.1 2523940 . C T 3678.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,153:155:99:3707,259,0
CP000253.1 2523976 . G C 4112.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4141,292,0
CP000253.1 2523997 . G A 4063.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5996;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4092,289,0
CP000253.1 2524012 . C T 3989.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7953;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4018,280,0
CP000253.1 2524108 . C T 3185.74 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3214,223,0
CP000253.1 2524114 . G A 3267.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7093;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,135:136:99:3296,229,0
CP000253.1 2524508 . T C 335.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:27:364,27,0
CP000253.1 2525812 . C T 2813.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2842,199,0
CP000253.1 2526234 . C T 1549.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0619;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.19;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1578,114,0
CP000253.1 2526422 . C T 2629.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0644;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2658,184,0
CP000253.1 2526542 . T A 3557.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6487;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3586,253,0
CP000253.1 2526590 . C T 4141.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0814;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4170,292,0
CP000253.1 2527037 . T C 1842.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.787;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=1.663;SOR=0.533 GT:AD:DP:GQ:PL 1/1:1,73:74:99:1871,132,0
CP000253.1 2527191 . A G 1796.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1825,129,0
CP000253.1 2527199 . A G 1746.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1775,126,0
CP000253.1 2527205 . C A 1990.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0298;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2019,141,0
CP000253.1 2527274 . G A 2017.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2046,144,0
CP000253.1 2527283 . T C 1753.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.974;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.36;ReadPosRankSum=1.733;SOR=0.234 GT:AD:DP:GQ:PL 1/1:1,71:72:99:1782,126,0
CP000253.1 2527332 . A G 1700.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:71:99:1729,120,0
CP000253.1 2527335 . G A 1742.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1771,123,0
CP000253.1 2527439 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2527771 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2527779 . T A 1731.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1760,123,0
CP000253.1 2527828 . C A 2451.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2480,172,0
CP000253.1 2528025 . C T 3316.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3345,238,0
CP000253.1 2528217 . A G 2815.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8510;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2844,202,0
CP000253.1 2528400 . C A 2581.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2610,187,0
CP000253.1 2528454 . C T 3204.83 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7133;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.28;ReadPosRankSum=-0.053;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,131:132:99:3233,226,0
CP000253.1 2528596 . G A 4179.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.934;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.18;ReadPosRankSum=0.887;SOR=0.320 GT:AD:DP:GQ:PL 1/1:1,165:167:99:4208,298,0
CP000253.1 2528620 . C T 3430.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.892;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.04;ReadPosRankSum=-1.227;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,136:137:99:3459,223,0
CP000253.1 2528639 . T G 3361.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.814;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.72;ReadPosRankSum=-1.606;SOR=0.229 GT:AD:DP:GQ:PL 1/1:1,135:136:99:3390,241,0
CP000253.1 2528680 . A G 3072.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3114;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3101,217,0
CP000253.1 2528782 . A G 2126.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.92;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2155,154,0
CP000253.1 2528934 . G T 3036.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0359;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:121:99:3065,220,0
CP000253.1 2529003 . A T 3200.06 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7806;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3228,229,0
CP000253.1 2529006 . C T 3343.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3372,238,0
CP000253.1 2529482 . T G 2076.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.932;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.02;ReadPosRankSum=-0.355;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,82:83:99:2105,150,0
CP000253.1 2529671 . G A 1174.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.70;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:87:1203,87,0
CP000253.1 2529740 . T C 1358.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1387,99,0
CP000253.1 2529949 . T C 1268.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.897;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5292;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.15;ReadPosRankSum=-0.520;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,59:60:56:1297,56,0
CP000253.1 2530109 . A G 1237.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1266,90,0
CP000253.1 2530112 . A C 1286.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:93:1315,93,0
CP000253.1 2530148 . A G 948.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:41:69:977,69,0
CP000253.1 2530528 . A T 749.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:54:778,54,0
CP000253.1 2530664 . T A 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7621;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 2530757 . A G 1079.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1108,78,0
CP000253.1 2530758 . A T 1117.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:81:1146,81,0
CP000253.1 2530761 . C T 1136.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.07;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:43:84:1165,84,0
CP000253.1 2530841 . C T 3345.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=1.144 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3374,241,0
CP000253.1 2530843 . C T 3766.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3795,268,0
CP000253.1 2530945 . A C 6430.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.653;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2605;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.72;ReadPosRankSum=-0.182;SOR=0.192 GT:AD:DP:GQ:PL 1/1:2,248:250:99:6459,429,0
CP000253.1 2531158 . A T 6005.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.624;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.3150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.00;ReadPosRankSum=0.967;SOR=0.374 GT:AD:DP:GQ:PL 1/1:2,229:232:99:6034,433,0
CP000253.1 2531353 . T G 3779.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,148:151:99:3808,268,0
CP000253.1 2531356 . G T 3832.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3191;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=1.097 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3861,271,0
CP000253.1 2531362 . T A 3795.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.712;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7061;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.31;ReadPosRankSum=1.910;SOR=0.806 GT:AD:DP:GQ:PL 1/1:2,148:150:99:3824,268,0
CP000253.1 2531368 . G T 3732.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.490;DP=150;Dels=0.00;ExcessHet=3.0103;FS=3.905;HaplotypeScore=12.5727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.89;ReadPosRankSum=2.189;SOR=0.806 GT:AD:DP:GQ:PL 1/1:2,148:150:99:3761,267,0
CP000253.1 2531377 . C A 3654.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6182;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3683,262,0
CP000253.1 2531380 . A T 3614.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5961;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=1.171 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3643,259,0
CP000253.1 2531382 . T C 3615.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=1.171 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3644,256,0
CP000253.1 2531395 . C T 3621.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=1.110 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3650,259,0
CP000253.1 2531404 . C T 3571.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7728;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=1.170 GT:AD:DP:GQ:PL 1/1:0,135:135:99:3600,253,0
CP000253.1 2531584 . A C 642.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:48:671,48,0
CP000253.1 2531590 . T G 720.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:54:749,54,0
CP000253.1 2531595 . A G 633.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:48:662,48,0
CP000253.1 2531717 . T A 971.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:69:1000,69,0
CP000253.1 2531718 . G A 970.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:69:999,69,0
CP000253.1 2531719 . T C 971.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:69:1000,69,0
CP000253.1 2531720 . A C 966.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:69:995,69,0
CP000253.1 2531731 . G T 959.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:69:988,69,0
CP000253.1 2531732 . A G 962.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:69:991,69,0
CP000253.1 2531744 . T C 931.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:66:960,66,0
CP000253.1 2531750 . A G 927.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,38:39:66:956,66,0
CP000253.1 2531762 . G A 956.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:38:69:985,69,0
CP000253.1 2531767 . G T 908.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:38:66:937,66,0
CP000253.1 2531777 . G A 859.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:63:888,63,0
CP000253.1 2531783 . G A 823.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:60:852,60,0
CP000253.1 2531786 . G A 748.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:57:777,57,0
CP000253.1 2531801 . A G 335.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.53;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:27:364,27,0
CP000253.1 2531804 . T A 263.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.31;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:10:21:292,21,0
CP000253.1 2531807 . C A 302.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.28;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:24:331,24,0
CP000253.1 2531810 . G A 298.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.88;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:24:327,24,0
CP000253.1 2531811 . C T 294.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.48;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:24:323,24,0
CP000253.1 2531813 . T C 252.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:21:281,21,0
CP000253.1 2531816 . A T 252.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:21:281,21,0
CP000253.1 2531819 . T C 248.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:21:277,21,0
CP000253.1 2531820 . G A 280.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.08;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:24:309,24,0
CP000253.1 2531825 . T C 302.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.28;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:24:331,24,0
CP000253.1 2532202 . A T 3159.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3950;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3188,223,0
CP000253.1 2532542 . A G 271.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:300,21,0
CP000253.1 2532858 . T A 2957.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6427;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2986,208,0
CP000253.1 2532993 . G A 3086.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9688;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3115,217,0
CP000253.1 2533005 . C T 3053.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,123:124:99:3082,214,0
CP000253.1 2533077 . G T 2320.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2886;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2349,166,0
CP000253.1 2533115 . T C 2349.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.40;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2378,172,0
CP000253.1 2533203 . A T 2646.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.01;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2675,193,0
CP000253.1 2533792 . G A 479.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:508,36,0
CP000253.1 2533817 . C T 88.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:116,9,0
CP000253.1 2533869 . C T 47.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:75,6,0
CP000253.1 2533899 . C T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 2534003 . T C 146.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:174,12,0
CP000253.1 2534251 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.61;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:9:130,9,0
CP000253.1 2534425 . C A 250.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.87;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:21:279,21,0
CP000253.1 2534621 . A G 755.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7873;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=22.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:54:784,54,0
CP000253.1 2534663 . T A 1017.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7829;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=24.23;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1046,72,0
CP000253.1 2534669 . A G 981.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.969;DP=42;Dels=0.00;ExcessHet=3.0103;FS=3.445;HaplotypeScore=2.8782;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=6.559;QD=23.38;ReadPosRankSum=-0.332;SOR=0.613 GT:AD:DP:GQ:PL 1/1:1,41:42:72:1010,72,0
CP000253.1 2534697 . C T 1099.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7878;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=24.44;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1128,78,0
CP000253.1 2534952 . G A 306.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.89;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:335,24,0
CP000253.1 2535059 . A G 271.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:12:21:300,21,0
CP000253.1 2535278 . G A 181.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:210,15,0
CP000253.1 2535380 . T A 477.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:36:506,36,0
CP000253.1 2535408 . T A 531.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:39:560,39,0
CP000253.1 2535450 . G A 418.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:33:447,33,0
CP000253.1 2535500 . G A 644.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:25:48:673,48,0
CP000253.1 2535520 . A T 635.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:48:664,48,0
CP000253.1 2535525 . C T 605.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:634,45,0
CP000253.1 2535533 . A G 601.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:630,45,0
CP000253.1 2535534 . T A 527.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:39:556,39,0
CP000253.1 2535538 . G A 602.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:45:631,45,0
CP000253.1 2535540 . T C 579.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:608,42,0
CP000253.1 2535548 . G C 611.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:28:45:640,45,0
CP000253.1 2535550 . G A 620.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:649,45,0
CP000253.1 2535554 . T C 651.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:680,48,0
CP000253.1 2535740 . C T 4828.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,195:196:99:4857,340,0
CP000253.1 2535773 . C T 5117.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.057;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.03;ReadPosRankSum=-1.176;SOR=0.933 GT:AD:DP:GQ:PL 1/1:2,211:214:99:5146,322,0
CP000253.1 2535782 . G A 5234.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,214:214:99:5263,370,0
CP000253.1 2535785 . A G 5050.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.544;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4138;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.71;ReadPosRankSum=-1.253;SOR=0.342 GT:AD:DP:GQ:PL 1/1:1,212:214:99:5079,336,0
CP000253.1 2535800 . T A 5474.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8611;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.983 GT:AD:DP:GQ:PL 1/1:0,225:227:99:5503,391,0
CP000253.1 2535824 . C G 5021.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.5767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,212:217:99:5050,364,0
CP000253.1 2536358 . A G 2815.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.931;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5380;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.32;ReadPosRankSum=1.733;SOR=0.467 GT:AD:DP:GQ:PL 1/1:1,106:109:99:2844,208,0
CP000253.1 2536670 . C T 2548.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.758;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8755;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.75;ReadPosRankSum=0.347;SOR=0.979 GT:AD:DP:GQ:PL 1/1:2,101:103:99:2577,142,0
CP000253.1 2537062 . T G 446.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:475,33,0
CP000253.1 2537066 . T G 441.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:470,33,0
CP000253.1 2537355 . C T 618.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:26:45:647,45,0
CP000253.1 2537403 . C T 724.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:51:753,51,0
CP000253.1 2537427 . G A 947.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6106;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:66:976,66,0
CP000253.1 2537481 . T C 1131.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:78:1160,78,0
CP000253.1 2537484 . G A 1120.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.98;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:78:1149,78,0
CP000253.1 2537561 . T G 1602.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.033;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.66;ReadPosRankSum=-0.679;SOR=0.266 GT:AD:DP:GQ:PL 1/1:1,73:74:99:1631,111,0
CP000253.1 2537577 . G A 1619.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.19;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1648,111,0
CP000253.1 2537581 . A G 1614.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1643,111,0
CP000253.1 2537586 . A G 1614.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1643,111,0
CP000253.1 2537596 . T A 1668.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.25;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1697,114,0
CP000253.1 2537605 . G A 1614.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1643,111,0
CP000253.1 2537610 . T C 1610.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1639,111,0
CP000253.1 2537613 . T C 1601.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1630,111,0
CP000253.1 2537614 . G A 1590.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.73;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1619,111,0
CP000253.1 2537616 . T C 1594.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1623,111,0
CP000253.1 2537680 . C T 450.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:479,33,0
CP000253.1 2537686 . A G 441.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:19:33:470,33,0
CP000253.1 2537710 . T G 496.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:525,36,0
CP000253.1 2537744 . A G 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 2537747 . G A 308.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.06;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:15:24:337,24,0
CP000253.1 2537748 . G T 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 2537753 . G A 315.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.05;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:344,24,0
CP000253.1 2537771 . C T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2537772 . T A 230.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:259,18,0
CP000253.1 2537775 . A G 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2537778 . T G 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2537780 . C G 226.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.68;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:255,18,0
CP000253.1 2537811 . T C 316.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:345,24,0
CP000253.1 2537883 . G A 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 2537887 . A G 231.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:260,18,0
CP000253.1 2537901 . T A 324.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:353,24,0
CP000253.1 2537906 . T A 410.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:19:30:439,30,0
CP000253.1 2537910 . C T 497.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:526,36,0
CP000253.1 2537961 . A T 1156.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:81:1185,81,0
CP000253.1 2537962 . G A 1158.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:81:1187,81,0
CP000253.1 2537988 . A G 1203.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:84:1232,84,0
CP000253.1 2537992 . T A 1239.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8271;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:87:1268,87,0
CP000253.1 2538124 . A C 999.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1028,72,0
CP000253.1 2538186 . A G 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 2539043 . G A 4918.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8020;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=-1.181;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,200:203:99:4947,346,0
CP000253.1 2539129 . G A 3617.77 . AC=2;AF=1.00;AN=2;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=1.364 GT:AD:DP:GQ:PL 1/1:0,136:136:99:3646,262,0
CP000253.1 2539199 . G T 2328.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5953;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2357,169,0
CP000253.1 2539238 . A G 1940.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=1.058 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1969,141,0
CP000253.1 2539256 . T A 1842.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4047;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1871,135,0
CP000253.1 2539307 . T C 1822.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0799;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1851,135,0
CP000253.1 2539385 . A C 1471.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=1.047 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1500,105,0
CP000253.1 2539394 . C T 1598.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1627,117,0
CP000253.1 2539789 . T C 2439.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5609;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2468,178,0
CP000253.1 2539795 . C T 2389.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3938;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2418,172,0
CP000253.1 2539954 . A G 4311.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,180:182:99:4340,304,0
CP000253.1 2540005 . C G 4398.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4427,307,0
CP000253.1 2540027 . T A 4165.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1395;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,176:177:99:4194,292,0
CP000253.1 2540047 . A G 4122.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7853;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,171:172:99:4151,292,0
CP000253.1 2540212 . C T 2789.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9428;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.57;SOR=1.168 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2818,202,0
CP000253.1 2540225 . T G 2734.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.043;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1607;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.56;ReadPosRankSum=0.210;SOR=0.793 GT:AD:DP:GQ:PL 1/1:1,106:107:99:2763,196,0
CP000253.1 2540229 . T C 2769.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2798,199,0
CP000253.1 2540348 . C A 1828.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1857,132,0
CP000253.1 2540351 . T A 1784.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1813,126,0
CP000253.1 2540354 . T C 1773.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1802,126,0
CP000253.1 2540357 . A T 1789.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1818,126,0
CP000253.1 2540360 . A C 1790.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.87;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1819,126,0
CP000253.1 2540363 . C T 1787.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1816,126,0
CP000253.1 2540786 . G A 3668.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0566;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.122 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3697,265,0
CP000253.1 2540808 . A C 3850.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3879,280,0
CP000253.1 2540809 . A G 3916.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6907;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3945,283,0
CP000253.1 2540903 . A G 5237.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2518;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=24.48;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,214:215:99:5266,373,0
CP000253.1 2540906 . A T 5316.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3443;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=24.50;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,217:218:99:5345,373,0
CP000253.1 2540909 . G A 5510.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2389;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=24.60;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,224:225:99:5539,385,0
CP000253.1 2540921 . A G 5125.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.806;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8395;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=23.51;ReadPosRankSum=1.542;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,217:223:99:5154,361,0
CP000253.1 2541026 . T C 5818.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.826;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7781;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.52;ReadPosRankSum=1.208;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,227:228:99:5847,412,0
CP000253.1 2541313 . G A 4242.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.19;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4271,304,0
CP000253.1 2541349 . T C 3652.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3337;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.46;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,133:135:99:3681,265,0
CP000253.1 2541409 . T G 3263.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3292,235,0
CP000253.1 2541763 . C G 3715.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.63;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3744,265,0
CP000253.1 2542154 . A T 4346.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.871;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7926;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.75;ReadPosRankSum=0.814;SOR=0.437 GT:AD:DP:GQ:PL 1/1:1,182:184:99:4375,304,0
CP000253.1 2542326 . A G 4972.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0021;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,220:220:99:5001,349,0
CP000253.1 2542542 . A G 1928.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1957,138,0
CP000253.1 2542557 . A G 1812.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.828;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.90;ReadPosRankSum=1.436;SOR=0.551 GT:AD:DP:GQ:PL 1/1:1,69:70:99:1841,132,0
CP000253.1 2542563 . A G 1881.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1910,135,0
CP000253.1 2542575 . T A 1858.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1887,132,0
CP000253.1 2542578 . G A 1876.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1905,135,0
CP000253.1 2542581 . A C 1892.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1921,138,0
CP000253.1 2542593 . G A 2050.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7776;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2079,144,0
CP000253.1 2542632 . A G 1680.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1709,120,0
CP000253.1 2542674 . C T 1792.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2994;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1821,126,0
CP000253.1 2542716 . C T 2003.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2032,141,0
CP000253.1 2542799 . T C 1701.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1730,120,0
CP000253.1 2542800 . C T 1609.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.283;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=-1.507;SOR=0.754 GT:AD:DP:GQ:PL 1/1:2,66:68:76:1638,76,0
CP000253.1 2542929 . T C 4628.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4254;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,179:180:99:4657,331,0
CP000253.1 2542932 . T C 4540.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4331;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4569,328,0
CP000253.1 2543119 . T G 6769.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.723;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7015;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.41;ReadPosRankSum=-0.582;SOR=0.230 GT:AD:DP:GQ:PL 1/1:1,246:248:99:6798,503,0
CP000253.1 2543367 . G A 6899.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.520;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.8815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.05;ReadPosRankSum=0.339;SOR=0.123 GT:AD:DP:GQ:PL 1/1:2,244:249:99:6928,509,0
CP000253.1 2543577 . C G 6579.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.5174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.97;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,244:247:99:6608,482,0
CP000253.1 2543700 . T C 6761.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.970;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2706;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.27;ReadPosRankSum=1.614;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,247:248:99:6790,488,0
CP000253.1 2544060 . C T 2473.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2502,178,0
CP000253.1 2544090 . G A 2718.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.65;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2747,196,0
CP000253.1 2544095 . C G 2910.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2939,208,0
CP000253.1 2544102 . T C 2834.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2863,205,0
CP000253.1 2544105 . G A 2985.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2983;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.52;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,117:118:99:3014,217,0
CP000253.1 2544140 . G T 3162.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4445;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,125:128:99:3191,223,0
CP000253.1 2544141 . C T 3168.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,127:128:99:3197,223,0
CP000253.1 2544144 . A T 3175.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.964;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5427;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.43;ReadPosRankSum=-1.226;SOR=0.229 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3204,223,0
CP000253.1 2544159 . A C 3361.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.646;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0005;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.54;ReadPosRankSum=1.176;SOR=0.769 GT:AD:DP:GQ:PL 1/1:2,135:138:99:3390,238,0
CP000253.1 2544162 . G A 3331.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4232;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3360,235,0
CP000253.1 2544171 . C T 3914.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3943,274,0
CP000253.1 2544180 . C T 3361.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9308;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3390,238,0
CP000253.1 2544183 . G A 3847.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3876,271,0
CP000253.1 2544186 . T A 3914.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,159:161:99:3943,274,0
CP000253.1 2544213 . C T 4273.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.719;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7301;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.85;ReadPosRankSum=-0.074;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,186:189:99:4302,276,0
CP000253.1 2544643 . T C 1258.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.751;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0844;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.78;ReadPosRankSum=0.628;SOR=1.108 GT:AD:DP:GQ:PL 1/1:1,46:47:96:1287,96,0
CP000253.1 2544684 . A G 2002.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.70;SOR=1.488 GT:AD:DP:GQ:PL 1/1:0,75:76:99:2031,147,0
CP000253.1 2544685 . G T 2041.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7788;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.18;SOR=1.409 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2070,150,0
CP000253.1 2544697 . A G 2167.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8906;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=1.141 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2196,160,0
CP000253.1 2544774 . G A 3560.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.256 GT:AD:DP:GQ:PL 1/1:0,135:139:99:3589,256,0
CP000253.1 2544949 . A G 5905.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.7142;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,243:244:99:5934,418,0
CP000253.1 2545106 . A G 6210.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.0072;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=26.54;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,234:238:99:6239,451,0
CP000253.1 2545146 . G A 6369.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.4270;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,244:246:99:6398,463,0
CP000253.1 2545201 . T C 5715.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,219:219:99:5744,409,0
CP000253.1 2545249 . T C 4887.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.813;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.8279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.09;ReadPosRankSum=-1.125;SOR=0.241 GT:AD:DP:GQ:PL 1/1:1,173:175:99:4916,361,0
CP000253.1 2545273 . T A 4477.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.243;DP=167;Dels=0.00;ExcessHet=3.0103;FS=3.310;HaplotypeScore=66.9081;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.81;ReadPosRankSum=-1.634;SOR=0.113 GT:AD:DP:GQ:PL 1/1:7,160:167:99:4506,302,0
CP000253.1 2545276 . C T 4403.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=62.8187;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.60;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,154:164:99:4432,331,0
CP000253.1 2545426 . C T 5930.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.606;DP=240;Dels=0.00;ExcessHet=3.0103;FS=3.292;HaplotypeScore=25.6638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.81;ReadPosRankSum=1.326;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,238:240:99:5959,406,0
CP000253.1 2545468 . G A 5762.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8292;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,233:235:99:5791,409,0
CP000253.1 2545489 . T C 5343.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5662;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,212:212:99:5372,382,0
CP000253.1 2545491 . T G 5089.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.019;DP=207;Dels=0.00;ExcessHet=3.0103;FS=3.032;HaplotypeScore=16.7780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.59;ReadPosRankSum=2.564;SOR=0.171 GT:AD:DP:GQ:PL 1/1:3,204:207:99:5118,344,0
CP000253.1 2545493 . T C 5251.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,205:206:99:5280,373,0
CP000253.1 2545495 . A G 5267.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7323;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,204:206:99:5296,379,0
CP000253.1 2545498 . T C 5370.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.893;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.70;ReadPosRankSum=0.705;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,208:209:99:5399,382,0
CP000253.1 2545516 . G C 5828.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5774;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,232:233:99:5857,415,0
CP000253.1 2545531 . A T 5923.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.603;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.2827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.38;ReadPosRankSum=2.319;SOR=0.806 GT:AD:DP:GQ:PL 1/1:2,241:247:99:5952,421,0
CP000253.1 2545546 . T A 6068.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8325;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6097,430,0
CP000253.1 2546356 . C T 3755.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8069;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3784,265,0
CP000253.1 2546357 . T G 3780.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.617;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7009;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.08;ReadPosRankSum=-1.089;SOR=0.553 GT:AD:DP:GQ:PL 1/1:2,155:157:99:3809,268,0
CP000253.1 2546447 . C A 2799.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2828,199,0
CP000253.1 2546663 . T C 791.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2848;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:60:820,60,0
CP000253.1 2547042 . C T 2076.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2105,147,0
CP000253.1 2547066 . T A 1969.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1998,141,0
CP000253.1 2547125 . T A 1455.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.916;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.47;ReadPosRankSum=1.735;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,52:53:99:1484,108,0
CP000253.1 2547249 . C T 2680.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2709,193,0
CP000253.1 2547366 . A G 4603.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8612;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,196:198:99:4632,328,0
CP000253.1 2547411 . G A 5086.77 . AC=2;AF=1.00;AN=2;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0956;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,216:216:99:5115,355,0
CP000253.1 2547611 . T G 3047.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2286;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.19;ReadPosRankSum=0.674;SOR=0.607 GT:AD:DP:GQ:PL 1/1:1,120:121:99:3076,220,0
CP000253.1 2547622 . A G 2814.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.560;DP=119;Dels=0.00;ExcessHet=3.0103;FS=2.933;HaplotypeScore=8.6562;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.65;ReadPosRankSum=1.532;SOR=0.149 GT:AD:DP:GQ:PL 1/1:2,117:119:99:2843,150,0
CP000253.1 2547641 . C A 2633.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.029;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.16;ReadPosRankSum=1.424;SOR=0.916 GT:AD:DP:GQ:PL 1/1:2,107:110:99:2662,192,0
CP000253.1 2547671 . G T 1882.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.811;DP=69;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=77.3668;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.10;ReadPosRankSum=0.960;SOR=0.412 GT:AD:DP:GQ:PL 1/1:1,66:67:99:1911,138,0
CP000253.1 2547672 . C T 1678.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=76.4395;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.45;SOR=1.217 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1707,123,0
CP000253.1 2547675 . T C 1591.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.460;DP=60;Dels=0.00;ExcessHet=3.0103;FS=2.847;HaplotypeScore=65.8984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.53;ReadPosRankSum=-0.911;SOR=0.223 GT:AD:DP:GQ:PL 1/1:2,58:60:99:1620,105,0
CP000253.1 2547681 . G T 1906.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.988;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=66.0660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.04;ReadPosRankSum=-1.328;SOR=1.094 GT:AD:DP:GQ:PL 1/1:1,67:69:99:1935,138,0
CP000253.1 2547699 . T C 1889.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=59.84;MQ0=0;QD=25.89;SOR=1.032 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1918,135,0
CP000253.1 2547700 . T C 1830.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=59.84;MQ0=0;QD=25.08;SOR=1.032 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1859,135,0
CP000253.1 2547735 . T G 1900.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=74;Dels=0.00;ExcessHet=3.0103;FS=3.979;HaplotypeScore=6.1394;MLEAC=2;MLEAF=1.00;MQ=58.28;MQ0=2;MQRankSum=-0.182;QD=25.69;ReadPosRankSum=1.059;SOR=1.041 GT:AD:DP:GQ:PL 1/1:1,73:74:99:1929,141,0
CP000253.1 2547746 . G A 1707.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.841;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9373;MLEAC=2;MLEAF=1.00;MQ=58.23;MQ0=2;MQRankSum=4.057;QD=23.72;ReadPosRankSum=1.228;SOR=1.196 GT:AD:DP:GQ:PL 1/1:6,66:72:51:1736,51,0
CP000253.1 2547765 . A C 893.56 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.501;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6101;MLEAC=1;MLEAF=0.500;MQ=57.01;MQ0=2;MQRankSum=2.593;QD=20.78;ReadPosRankSum=1.137;SOR=1.125 GT:AD:DP:GQ:PL 0/1:7,36:43:7:921,0,7
CP000253.1 2547779 . G A 731.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.437;DP=33;Dels=0.00;ExcessHet=3.0103;FS=2.208;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=56.07;MQ0=2;MQRankSum=2.580;QD=22.18;ReadPosRankSum=3.220;SOR=1.528 GT:AD:DP:GQ:PL 0/1:6,27:33:21:760,0,21
CP000253.1 2547784 . T A 725.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.627;DP=33;Dels=0.00;ExcessHet=3.0103;FS=2.208;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=56.07;MQ0=2;MQRankSum=2.580;QD=21.99;ReadPosRankSum=3.217;SOR=1.528 GT:AD:DP:GQ:PL 0/1:6,27:33:21:754,0,21
CP000253.1 2547795 . G T 737.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=27.32;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,27:27:57:766,57,0
CP000253.1 2547796 . C T 785.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=29.10;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,27:27:60:814,60,0
CP000253.1 2547799 . T C 742.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.928;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;MQRankSum=-0.141;QD=27.51;ReadPosRankSum=-0.322;SOR=1.549 GT:AD:DP:GQ:PL 1/1:1,26:27:57:771,57,0
CP000253.1 2547823 . C T 1614.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7815;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;QD=25.63;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1643,117,0
CP000253.1 2547829 . A T 1680.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8874;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;QD=26.68;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1709,120,0
CP000253.1 2547861 . G T 1677.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1706,117,0
CP000253.1 2547862 . T C 1755.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1784,123,0
CP000253.1 2547868 . A C 1673.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1702,117,0
CP000253.1 2547916 . C T 1673.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1702,117,0
CP000253.1 2547938 . A T 1601.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1630,111,0
CP000253.1 2547959 . T C 1493.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1522,105,0
CP000253.1 2548098 . C T 515.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.844;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.56;ReadPosRankSum=1.407;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,20:21:39:544,39,0
CP000253.1 2548109 . T A 596.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:45:625,45,0
CP000253.1 2548876 . C A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2548890 . A T 300.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.15;MQ0=0;QD=30.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:24:329,24,0
CP000253.1 2548964 . T G 2985.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.874;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5655;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=0.000;QD=29.27;ReadPosRankSum=-0.042;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,101:102:99:3014,223,0
CP000253.1 2549313 . C T 5032.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.859;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3674;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.94;ReadPosRankSum=0.482;SOR=0.306 GT:AD:DP:GQ:PL 1/1:1,193:194:99:5061,358,0
CP000253.1 2549321 . C A 4843.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.502;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.9289;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.49;ReadPosRankSum=1.189;SOR=0.714 GT:AD:DP:GQ:PL 1/1:2,188:190:99:4872,349,0
CP000253.1 2549330 . T C 4734.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,188:189:99:4763,346,0
CP000253.1 2549337 . G A 4973.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.0829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,197:198:99:5002,367,0
CP000253.1 2549379 . A G 4819.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.613;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.8821;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.23;ReadPosRankSum=-1.261;SOR=0.359 GT:AD:DP:GQ:PL 1/1:1,190:196:99:4848,355,0
CP000253.1 2549400 . A T 4994.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.482;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8918;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.61;ReadPosRankSum=-0.315;SOR=0.198 GT:AD:DP:GQ:PL 1/1:2,193:196:99:5023,364,0
CP000253.1 2549412 . G A 4935.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.98;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,190:191:99:4964,358,0
CP000253.1 2549416 . G T 4936.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9700;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,188:188:99:4965,358,0
CP000253.1 2549421 . T C 4874.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.768;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6043;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.49;ReadPosRankSum=1.290;SOR=0.346 GT:AD:DP:GQ:PL 1/1:1,183:184:99:4903,352,0
CP000253.1 2549427 . G T 4887.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1613;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4916,349,0
CP000253.1 2549501 . A T 4993.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.895;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.74;ReadPosRankSum=-1.625;SOR=0.340 GT:AD:DP:GQ:PL 1/1:1,193:195:99:5022,358,0
CP000253.1 2549566 . T C 4725.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.439;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4217;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=-0.182;SOR=0.834 GT:AD:DP:GQ:PL 1/1:2,180:183:99:4754,301,0
CP000253.1 2549661 . G A 4363.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4392,313,0
CP000253.1 2549662 . C T 4243.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.69;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,159:162:99:4272,307,0
CP000253.1 2549663 . T C 4297.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4326,307,0
CP000253.1 2549666 . C A 4277.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.950;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0454;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.41;ReadPosRankSum=0.867;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,161:162:99:4306,307,0
CP000253.1 2549668 . T A 4395.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0531;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4424,316,0
CP000253.1 2549700 . A G 4152.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2616;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.32;ReadPosRankSum=-0.021;SOR=0.483 GT:AD:DP:GQ:PL 1/1:1,163:166:99:4181,295,0
CP000253.1 2549771 . A C 3696.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.584;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3759;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.65;ReadPosRankSum=0.279;SOR=0.898 GT:AD:DP:GQ:PL 1/1:2,148:150:99:3725,262,0
CP000253.1 2549799 . A T 3444.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.860;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.9046;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.33;ReadPosRankSum=-1.492;SOR=0.345 GT:AD:DP:GQ:PL 1/1:1,135:137:99:3473,247,0
CP000253.1 2549832 . T A 3187.75 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=1.142 GT:AD:DP:GQ:PL 1/1:0,121:123:99:3216,232,0
CP000253.1 2549911 . G A 1948.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.45;SOR=1.276 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1977,141,0
CP000253.1 2549940 . T C 1640.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7520;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.79;SOR=1.569 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1669,120,0
CP000253.1 2549953 . A G 1594.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=42.5751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=1.692 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1623,117,0
CP000253.1 2549969 . C A 909.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.76;SOR=1.418 GT:AD:DP:GQ:PL 1/1:0,34:34:69:938,69,0
CP000253.1 2550008 . T C 377.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:30:406,30,0
CP000253.1 2550013 . T C 312.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:341,24,0
CP000253.1 2550018 . C T 308.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:337,24,0
CP000253.1 2550083 . A C 660.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:48:689,48,0
CP000253.1 2550153 . C T 746.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:775,54,0
CP000253.1 2550219 . A G 727.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:756,54,0
CP000253.1 2550456 . T A 1527.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.373;DP=62;Dels=0.00;ExcessHet=3.0103;FS=3.941;HaplotypeScore=7.8989;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.64;ReadPosRankSum=1.737;SOR=0.940 GT:AD:DP:GQ:PL 1/1:1,61:62:80:1556,80,0
CP000253.1 2550459 . C T 1590.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0678;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1619,114,0
CP000253.1 2550579 . C T 2241.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2270,160,0
CP000253.1 2550585 . A T 2140.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3030;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2169,153,0
CP000253.1 2550586 . C T 2078.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.010;DP=90;Dels=0.00;ExcessHet=3.0103;FS=3.261;HaplotypeScore=6.3304;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.36;ReadPosRankSum=-0.428;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,88:90:99:2107,116,0
CP000253.1 2550850 . A G 1981.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8490;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2010,141,0
CP000253.1 2550942 . C T 1168.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:46:87:1197,87,0
CP000253.1 2550957 . C T 1169.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7457;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:46:87:1198,87,0
CP000253.1 2551386 . C T 3147.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3176,223,0
CP000253.1 2551389 . A G 3151.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7040;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3180,223,0
CP000253.1 2551545 . T C 3494.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4700;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,144:145:99:3523,247,0
CP000253.1 2551579 . C T 2629.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4101;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2658,187,0
CP000253.1 2551764 . A G 719.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.046;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.82;ReadPosRankSum=0.428;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,28:29:54:748,54,0
CP000253.1 2552038 . A T 597.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:626,45,0
CP000253.1 2552080 . G C 944.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:40:69:973,69,0
CP000253.1 2552234 . G A 329.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:27:358,27,0
CP000253.1 2552285 . A G 127.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0
CP000253.1 2552413 . A C 224.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:253,18,0
CP000253.1 2552426 . A G 252.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:281,21,0
CP000253.1 2552433 . T A 265.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:294,21,0
CP000253.1 2552438 . C T 357.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:27:386,27,0
CP000253.1 2552449 . C T 390.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:419,30,0
CP000253.1 2552461 . C T 567.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:596,42,0
CP000253.1 2552468 . A C 567.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:596,42,0
CP000253.1 2552474 . C T 564.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:42:593,42,0
CP000253.1 2552476 . T G 579.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.21;ReadPosRankSum=1.060;SOR=1.447 GT:AD:DP:GQ:PL 1/1:1,22:23:45:608,45,0
CP000253.1 2552483 . T C 1222.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.695;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=0.742;SOR=0.582 GT:AD:DP:GQ:PL 1/1:1,48:49:71:1251,71,0
CP000253.1 2552538 . T G 3223.52 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=1.170 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3252,226,0
CP000253.1 2552630 . A G 3348.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7010;MLEAC=2;MLEAF=1.00;MQ=58.63;MQ0=0;QD=23.75;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3377,235,0
CP000253.1 2552650 . T C 1918.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.63;MQ0=0;QD=23.40;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1947,135,0
CP000253.1 2552651 . T G 1981.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.63;MQ0=0;QD=24.17;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2010,141,0
CP000253.1 2552654 . T A 1980.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.63;MQ0=0;QD=24.16;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2009,141,0
CP000253.1 2552664 . C A 1935.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=24.20;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1964,138,0
CP000253.1 2552665 . T A 1866.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=23.33;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1895,132,0
CP000253.1 2552668 . C G 1925.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=24.07;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1954,135,0
CP000253.1 2552672 . T C 1915.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=23.95;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1944,138,0
CP000253.1 2552683 . A G 1901.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4633;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=23.77;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1930,135,0
CP000253.1 2552687 . T C 1780.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.388;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3293;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;MQRankSum=-0.383;QD=22.26;ReadPosRankSum=-0.759;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,79:80:99:1809,99,0
CP000253.1 2552689 . T C 1861.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2958;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=23.87;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:80:99:1890,135,0
CP000253.1 2552691 . T C 1794.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.656;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4018;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;MQRankSum=-0.383;QD=22.43;ReadPosRankSum=-0.715;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,79:80:99:1823,103,0
CP000253.1 2552692 . C T 1899.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.956;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4018;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;MQRankSum=-0.383;QD=23.75;ReadPosRankSum=-0.715;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,79:80:99:1928,135,0
CP000253.1 2552695 . C A 1813.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2811;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=22.96;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1842,129,0
CP000253.1 2552698 . C T 1905.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3991;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=24.12;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1934,135,0
CP000253.1 2552707 . T C 1905.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8271;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=23.82;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1934,135,0
CP000253.1 2552717 . G A 1926.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=24.08;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1955,138,0
CP000253.1 2552726 . T C 1751.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.728;DP=92;Dels=0.00;ExcessHet=3.0103;FS=1.169;HaplotypeScore=5.1239;MLEAC=1;MLEAF=0.500;MQ=55.61;MQ0=0;MQRankSum=6.104;QD=19.04;ReadPosRankSum=5.580;SOR=0.968 GT:AD:DP:GQ:PL 0/1:12,80:92:99:1780,0,112
CP000253.1 2552730 . T A 83.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.800;DP=92;Dels=0.00;ExcessHet=3.0103;FS=1.187;HaplotypeScore=4.2917;MLEAC=1;MLEAF=0.500;MQ=55.61;MQ0=0;MQRankSum=-6.089;QD=0.91;ReadPosRankSum=-4.872;SOR=0.478 GT:AD:DP:GQ:PL 0/1:80,12:92:99:112,0,1805
CP000253.1 2552732 . A G 89.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.656;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2706;MLEAC=1;MLEAF=0.500;MQ=55.61;MQ0=0;MQRankSum=-6.089;QD=0.98;ReadPosRankSum=-4.872;SOR=0.478 GT:AD:DP:GQ:PL 0/1:80,12:92:99:118,0,1713
CP000253.1 2552737 . G T 86.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.996;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6432;MLEAC=1;MLEAF=0.500;MQ=55.45;MQ0=0;MQRankSum=-5.959;QD=0.97;ReadPosRankSum=-4.328;SOR=0.490 GT:AD:DP:GQ:PL 0/1:77,12:89:99:115,0,1731
CP000253.1 2552741 . A T 1168.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.274;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8110;MLEAC=1;MLEAF=0.500;MQ=53.67;MQ0=0;MQRankSum=4.760;QD=18.55;ReadPosRankSum=5.175;SOR=0.732 GT:AD:DP:GQ:PL 0/1:12,51:64:99:1197,0,157
CP000253.1 2552744 . C T 1549.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8110;MLEAC=2;MLEAF=1.00;MQ=53.56;MQ0=0;QD=24.60;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1578,111,0
CP000253.1 2552746 . A T 1166.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.535;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8110;MLEAC=1;MLEAF=0.500;MQ=53.56;MQ0=0;MQRankSum=4.760;QD=18.52;ReadPosRankSum=4.019;SOR=0.813 GT:AD:DP:GQ:PL 0/1:12,51:63:99:1195,0,157
CP000253.1 2552747 . T A 1169.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.289;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8110;MLEAC=1;MLEAF=0.500;MQ=53.56;MQ0=0;MQRankSum=4.760;QD=18.57;ReadPosRankSum=3.910;SOR=0.813 GT:AD:DP:GQ:PL 0/1:12,51:63:99:1198,0,157
CP000253.1 2552753 . A G 131.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.014;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=1;MLEAF=0.500;MQ=53.56;MQ0=0;MQRankSum=-4.740;QD=2.09;ReadPosRankSum=-3.049;SOR=0.586 GT:AD:DP:GQ:PL 0/1:51,12:63:99:160,0,1132
CP000253.1 2552757 . G A 131.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.812;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=53.56;MQ0=0;MQRankSum=-4.740;QD=2.09;ReadPosRankSum=-1.573;SOR=0.586 GT:AD:DP:GQ:PL 0/1:51,12:63:99:160,0,1160
CP000253.1 2552758 . T C 131.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.253;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=53.56;MQ0=0;MQRankSum=-4.740;QD=2.09;ReadPosRankSum=-1.573;SOR=0.586 GT:AD:DP:GQ:PL 0/1:51,12:63:99:160,0,1159
CP000253.1 2552764 . C T 1033.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.841;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=52.84;MQ0=0;MQRankSum=4.380;QD=18.14;ReadPosRankSum=-0.344;SOR=0.829 GT:AD:DP:GQ:PL 0/1:12,45:57:99:1062,0,166
CP000253.1 2552770 . C T 966.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.017;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=1;MLEAF=0.500;MQ=52.56;MQ0=0;MQRankSum=4.243;QD=17.58;ReadPosRankSum=-1.467;SOR=0.836 GT:AD:DP:GQ:PL 0/1:12,43:55:99:995,0,169
CP000253.1 2552774 . A G 930.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.104;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=1;MLEAF=0.500;MQ=52.26;MQ0=0;MQRankSum=4.101;QD=17.56;ReadPosRankSum=-1.657;SOR=0.741 GT:AD:DP:GQ:PL 0/1:12,41:53:99:959,0,175
CP000253.1 2552783 . G T 149.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.998;DP=51;Dels=0.00;ExcessHet=3.0103;FS=1.218;HaplotypeScore=3.5116;MLEAC=1;MLEAF=0.500;MQ=51.93;MQ0=0;MQRankSum=-3.551;QD=2.94;ReadPosRankSum=1.254;SOR=0.754 GT:AD:DP:GQ:PL 0/1:38,13:51:99:178,0,903
CP000253.1 2552789 . T A,G 1050.77 . AC=1,1;AF=0.500,0.500;AN=2;BaseQRankSum=1.576;DP=48;Dels=0.00;ExcessHet=3.0103;FS=3.388;HaplotypeScore=2.5149;MLEAC=1,1;MLEAF=0.500,0.500;MQ=51.39;MQ0=0;MQRankSum=-0.857;QD=21.89;ReadPosRankSum=-0.036;SOR=0.563 GT:AD:DP:GQ:PL 1/2:1,12,35:48:99:1079,832,839,250,0,181
CP000253.1 2552798 . C T 94.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.588;DP=16;Dels=0.00;ExcessHet=3.0103;FS=6.317;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=45.90;MQ0=0;MQRankSum=3.025;QD=5.92;ReadPosRankSum=-3.749;SOR=3.258 GT:AD:DP:GQ:PL 0/1:12,4:16:99:123,0,238
CP000253.1 2552828 . G T 239.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.11;MQ0=0;QD=19.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:268,18,0
CP000253.1 2552849 . A G 239.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.11;MQ0=0;QD=19.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:268,18,0
CP000253.1 2552852 . C T 239.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.11;MQ0=0;QD=19.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:268,18,0
CP000253.1 2552860 . T G 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=39.51;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2552865 . T A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=39.51;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2552885 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2552894 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2552974 . A C 48.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:76,6,0
CP000253.1 2552979 . G A 47.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:75,6,0
CP000253.1 2552990 . C T 90.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0
CP000253.1 2552993 . T A 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 2553010 . T C 89.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:117,9,0
CP000253.1 2553027 . G T 133.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.71;MQ0=0;QD=26.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:161,12,0
CP000253.1 2553028 . A T 131.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.71;MQ0=0;QD=26.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:159,12,0
CP000253.1 2553060 . T A 187.90 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=58.53;MQ0=0;QD=17.08;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:15:216,15,0
CP000253.1 2553103 . C T 1214.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.11;MQ0=0;QD=25.85;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,47:47:90:1243,90,0
CP000253.1 2553108 . T G 1209.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=55.11;MQ0=0;QD=25.74;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,47:47:90:1238,90,0
CP000253.1 2553109 . G C 1083.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=55.11;MQ0=0;QD=23.06;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1112,84,0
CP000253.1 2553115 . C T 1441.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=55.59;MQ0=0;QD=25.29;SOR=1.238 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1470,105,0
CP000253.1 2553127 . G A 1504.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=55.34;MQ0=0;QD=25.08;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1533,111,0
CP000253.1 2553134 . T C 1513.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4648;MLEAC=2;MLEAF=1.00;MQ=55.34;MQ0=0;QD=25.23;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1542,111,0
CP000253.1 2553144 . C T 163.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.465;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3366;MLEAC=1;MLEAF=0.500;MQ=54.88;MQ0=0;MQRankSum=1.726;QD=2.68;ReadPosRankSum=6.005;SOR=0.399 GT:AD:DP:GQ:PL 0/1:48,13:61:99:192,0,1015
CP000253.1 2553145 . T A 162.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.472;DP=61;Dels=0.00;ExcessHet=3.0103;FS=1.249;HaplotypeScore=6.3366;MLEAC=1;MLEAF=0.500;MQ=54.88;MQ0=0;MQRankSum=1.726;QD=2.67;ReadPosRankSum=6.005;SOR=0.399 GT:AD:DP:GQ:PL 0/1:48,13:61:99:191,0,1042
CP000253.1 2553148 . C T 167.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.690;DP=63;Dels=0.00;ExcessHet=3.0103;FS=1.239;HaplotypeScore=4.5758;MLEAC=1;MLEAF=0.500;MQ=54.84;MQ0=0;MQRankSum=1.747;QD=2.66;ReadPosRankSum=5.979;SOR=0.412 GT:AD:DP:GQ:PL 0/1:50,13:63:99:196,0,1161
CP000253.1 2553150 . T A 153.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.985;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6817;MLEAC=1;MLEAF=0.500;MQ=54.84;MQ0=0;MQRankSum=1.747;QD=2.44;ReadPosRankSum=5.979;SOR=0.412 GT:AD:DP:GQ:PL 0/1:50,13:63:99:182,0,1079
CP000253.1 2553152 . G T 150.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.325;DP=63;Dels=0.00;ExcessHet=3.0103;FS=2.703;HaplotypeScore=5.4699;MLEAC=1;MLEAF=0.500;MQ=54.84;MQ0=0;MQRankSum=1.914;QD=2.39;ReadPosRankSum=5.391;SOR=0.302 GT:AD:DP:GQ:PL 0/1:49,14:63:99:179,0,1086
CP000253.1 2553157 . A T 160.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.516;DP=63;Dels=0.00;ExcessHet=3.0103;FS=1.239;HaplotypeScore=5.5753;MLEAC=1;MLEAF=0.500;MQ=54.84;MQ0=0;MQRankSum=1.747;QD=2.55;ReadPosRankSum=5.979;SOR=0.412 GT:AD:DP:GQ:PL 0/1:50,13:63:99:189,0,1152
CP000253.1 2553158 . C A 163.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.206;DP=63;Dels=0.00;ExcessHet=3.0103;FS=1.239;HaplotypeScore=6.4694;MLEAC=1;MLEAF=0.500;MQ=54.84;MQ0=0;MQRankSum=1.747;QD=2.60;ReadPosRankSum=5.979;SOR=0.412 GT:AD:DP:GQ:PL 0/1:50,13:63:99:192,0,1125
CP000253.1 2553163 . T C 1134.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.246;DP=63;Dels=0.00;ExcessHet=3.0103;FS=1.239;HaplotypeScore=5.4699;MLEAC=1;MLEAF=0.500;MQ=54.84;MQ0=0;MQRankSum=-1.727;QD=18.01;ReadPosRankSum=-5.961;SOR=1.085 GT:AD:DP:GQ:PL 0/1:13,50:63:99:1163,0,195
CP000253.1 2553167 . T A 175.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.968;DP=63;Dels=0.00;ExcessHet=3.0103;FS=1.239;HaplotypeScore=5.5732;MLEAC=1;MLEAF=0.500;MQ=54.84;MQ0=0;MQRankSum=1.747;QD=2.79;ReadPosRankSum=5.979;SOR=0.412 GT:AD:DP:GQ:PL 0/1:50,13:63:99:204,0,1168
CP000253.1 2553169 . A G 162.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.438;DP=63;Dels=0.00;ExcessHet=3.0103;FS=1.239;HaplotypeScore=6.5727;MLEAC=1;MLEAF=0.500;MQ=54.84;MQ0=0;MQRankSum=1.747;QD=2.58;ReadPosRankSum=5.979;SOR=0.412 GT:AD:DP:GQ:PL 0/1:50,13:63:99:191,0,1161
CP000253.1 2553174 . G T 170.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.718;DP=61;Dels=0.00;ExcessHet=3.0103;FS=2.737;HaplotypeScore=10.3340;MLEAC=1;MLEAF=0.500;MQ=54.66;MQ0=0;MQRankSum=2.006;QD=2.80;ReadPosRankSum=5.379;SOR=0.291 GT:AD:DP:GQ:PL 0/1:47,14:61:99:199,0,1012
CP000253.1 2553178 . T A 164.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.860;DP=61;Dels=0.00;ExcessHet=3.0103;FS=1.249;HaplotypeScore=10.3342;MLEAC=1;MLEAF=0.500;MQ=54.66;MQ0=0;MQRankSum=1.835;QD=2.70;ReadPosRankSum=6.004;SOR=0.399 GT:AD:DP:GQ:PL 0/1:48,13:61:99:193,0,1087
CP000253.1 2553183 . T A 130.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.371;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4295;MLEAC=1;MLEAF=0.500;MQ=54.66;MQ0=0;MQRankSum=1.658;QD=2.14;ReadPosRankSum=5.176;SOR=0.554 GT:AD:DP:GQ:PL 0/1:49,12:61:99:159,0,1120
CP000253.1 2553184 . A T 159.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.811;DP=61;Dels=0.00;ExcessHet=3.0103;FS=1.239;HaplotypeScore=12.2177;MLEAC=1;MLEAF=0.500;MQ=54.66;MQ0=0;MQRankSum=1.835;QD=2.62;ReadPosRankSum=4.736;SOR=0.399 GT:AD:DP:GQ:PL 0/1:48,13:61:99:188,0,1122
CP000253.1 2553190 . A G 159.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.148;DP=61;Dels=0.00;ExcessHet=3.0103;FS=1.249;HaplotypeScore=12.0089;MLEAC=1;MLEAF=0.500;MQ=54.66;MQ0=0;MQRankSum=1.835;QD=2.62;ReadPosRankSum=3.449;SOR=0.399 GT:AD:DP:GQ:PL 0/1:48,13:61:99:188,0,1122
CP000253.1 2553194 . G A 202.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.645;DP=61;Dels=0.00;ExcessHet=3.0103;FS=2.807;HaplotypeScore=6.4595;MLEAC=1;MLEAF=0.500;MQ=54.66;MQ0=0;MQRankSum=1.928;QD=3.44;ReadPosRankSum=2.949;SOR=0.331 GT:AD:DP:GQ:PL 0/1:46,13:61:99:231,0,1117
CP000253.1 2553195 . T C 201.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.702;DP=61;Dels=0.00;ExcessHet=3.0103;FS=1.249;HaplotypeScore=6.4595;MLEAC=1;MLEAF=0.500;MQ=54.66;MQ0=0;MQRankSum=1.835;QD=3.31;ReadPosRankSum=2.950;SOR=0.399 GT:AD:DP:GQ:PL 0/1:48,13:61:99:230,0,1138
CP000253.1 2553201 . T C 215.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.497;DP=66;Dels=0.00;ExcessHet=3.0103;FS=1.090;HaplotypeScore=6.4556;MLEAC=1;MLEAF=0.500;MQ=54.80;MQ0=0;MQRankSum=1.511;QD=3.27;ReadPosRankSum=-1.202;SOR=0.445 GT:AD:DP:GQ:PL 0/1:48,18:66:99:244,0,1109
CP000253.1 2553207 . T C 286.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.795;DP=68;Dels=0.00;ExcessHet=3.0103;FS=1.076;HaplotypeScore=2.7840;MLEAC=1;MLEAF=0.500;MQ=54.25;MQ0=0;MQRankSum=0.785;QD=4.22;ReadPosRankSum=-2.414;SOR=0.432 GT:AD:DP:GQ:PL 0/1:48,20:68:99:315,0,1119
CP000253.1 2553211 . G A 294.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.608;DP=68;Dels=0.00;ExcessHet=3.0103;FS=1.036;HaplotypeScore=4.6772;MLEAC=1;MLEAF=0.500;MQ=54.25;MQ0=0;MQRankSum=1.044;QD=4.40;ReadPosRankSum=-3.239;SOR=0.475 GT:AD:DP:GQ:PL 0/1:46,21:68:99:323,0,1064
CP000253.1 2553220 . T G 1015.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.521;DP=68;Dels=0.00;ExcessHet=3.0103;FS=3.777;HaplotypeScore=4.4667;MLEAC=1;MLEAF=0.500;MQ=54.25;MQ0=0;MQRankSum=-1.150;QD=14.94;ReadPosRankSum=4.545;SOR=1.464 GT:AD:DP:GQ:PL 0/1:22,46:68:99:1044,0,351
CP000253.1 2553226 . A G 992.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.401;DP=66;Dels=0.00;ExcessHet=3.0103;FS=1.101;HaplotypeScore=3.4090;MLEAC=1;MLEAF=0.500;MQ=54.06;MQ0=0;MQRankSum=-0.901;QD=15.04;ReadPosRankSum=4.742;SOR=1.197 GT:AD:DP:GQ:PL 0/1:20,46:66:99:1021,0,361
CP000253.1 2553263 . G A 489.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=55.21;MQ0=0;QD=23.32;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:518,36,0
CP000253.1 2553265 . G T 448.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=1;MLEAF=0.500;MQ=55.21;MQ0=0;QD=22.44;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:21:33:472,33,0
CP000253.1 2553292 . A G 406.22 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.713;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7597;MLEAC=1;MLEAF=0.500;MQ=54.68;MQ0=0;MQRankSum=1.525;QD=21.38;ReadPosRankSum=-0.462;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,18:19:4:433,0,4
CP000253.1 2553302 . T A 375.96 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.687;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.02;MQ0=0;MQRankSum=1.438;QD=22.12;ReadPosRankSum=-0.311;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,16:17:5:403,0,5
CP000253.1 2553307 . G A 309.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.17;MQ0=0;QD=20.65;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:24:338,24,0
CP000253.1 2553316 . G A 240.85 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.646;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=55.44;MQ0=0;MQRankSum=1.855;QD=20.07;ReadPosRankSum=0.301;SOR=0.495 GT:AD:DP:GQ:PL 0/1:1,11:12:17:269,0,17
CP000253.1 2553352 . G A 74.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9995;MLEAC=1;MLEAF=0.500;MQ=55.23;MQ0=0;MQRankSum=1.465;QD=10.68;ReadPosRankSum=1.465;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,6:8:26:103,0,26
CP000253.1 2553355 . T A 127.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.07;MQ0=0;QD=18.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:155,12,0
CP000253.1 2553360 . C A 106.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.07;MQ0=0;QD=15.18;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:9:134,9,0
CP000253.1 2553390 . C T 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.08;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2553394 . T A 134.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.08;MQ0=0;QD=22.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:162,12,0
CP000253.1 2553405 . C T 87.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6912;MLEAC=2;MLEAF=1.00;MQ=58.79;MQ0=0;QD=21.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:115,9,0
CP000253.1 2553852 . T C 183.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.156;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=56.21;MQ0=3;MQRankSum=-7.111;QD=2.78;ReadPosRankSum=-4.868;SOR=0.818 GT:AD:DP:GQ:PL 0/1:48,18:66:99:212,0,1007
CP000253.1 2553870 . A T 235.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.582;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=1;MLEAF=0.500;MQ=56.21;MQ0=3;MQRankSum=-6.538;QD=3.57;ReadPosRankSum=-4.297;SOR=0.804 GT:AD:DP:GQ:PL 0/1:46,20:66:99:264,0,920
CP000253.1 2553872 . A T 238.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.020;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8730;MLEAC=1;MLEAF=0.500;MQ=56.21;MQ0=3;MQRankSum=-6.538;QD=3.62;ReadPosRankSum=-4.297;SOR=0.804 GT:AD:DP:GQ:PL 0/1:46,20:66:99:267,0,880
CP000253.1 2553873 . C A 235.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.168;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8730;MLEAC=1;MLEAF=0.500;MQ=56.21;MQ0=3;MQRankSum=-6.538;QD=3.57;ReadPosRankSum=-4.298;SOR=0.804 GT:AD:DP:GQ:PL 0/1:46,20:66:99:264,0,923
CP000253.1 2553874 . C G 235.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.163;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8730;MLEAC=1;MLEAF=0.500;MQ=56.21;MQ0=3;MQRankSum=-6.477;QD=3.63;ReadPosRankSum=-3.736;SOR=0.758 GT:AD:DP:GQ:PL 0/1:45,20:66:99:264,0,920
CP000253.1 2553879 . T A 235.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.299;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=1;MLEAF=0.500;MQ=56.21;MQ0=3;MQRankSum=-6.538;QD=3.57;ReadPosRankSum=-3.705;SOR=0.804 GT:AD:DP:GQ:PL 0/1:46,20:66:99:264,0,932
CP000253.1 2553883 . A G 228.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.148;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=1;MLEAF=0.500;MQ=56.21;MQ0=3;MQRankSum=-6.538;QD=3.47;ReadPosRankSum=-3.003;SOR=0.804 GT:AD:DP:GQ:PL 0/1:46,20:66:99:257,0,969
CP000253.1 2553884 . C T 227.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.738;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7670;MLEAC=1;MLEAF=0.500;MQ=56.21;MQ0=3;MQRankSum=-6.538;QD=3.45;ReadPosRankSum=-3.003;SOR=0.804 GT:AD:DP:GQ:PL 0/1:46,20:66:99:256,0,947
CP000253.1 2553890 . C T 633.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=56.93;MQ0=3;MQRankSum=-4.433;QD=7.82;ReadPosRankSum=-5.222;SOR=0.811 GT:AD:DP:GQ:PL 0/1:44,37:81:99:662,0,897
CP000253.1 2553896 . C T 643.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.574;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=56.85;MQ0=3;MQRankSum=-4.340;QD=8.15;ReadPosRankSum=-3.782;SOR=0.811 GT:AD:DP:GQ:PL 0/1:42,37:79:99:672,0,816
CP000253.1 2553900 . A G 643.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.534;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=56.85;MQ0=3;MQRankSum=-4.340;QD=8.15;ReadPosRankSum=-3.032;SOR=0.811 GT:AD:DP:GQ:PL 0/1:42,37:79:99:672,0,830
CP000253.1 2553909 . T G 756.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.124;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=56.78;MQ0=3;MQRankSum=-4.177;QD=9.34;ReadPosRankSum=-2.709;SOR=0.693 GT:AD:DP:GQ:PL 0/1:40,41:81:99:785,0,803
CP000253.1 2553915 . A G 800.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.275;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=56.93;MQ0=3;MQRankSum=-4.154;QD=9.42;ReadPosRankSum=-0.715;SOR=0.693 GT:AD:DP:GQ:PL 0/1:42,43:85:99:829,0,795
CP000253.1 2553927 . T G 802.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.141;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4849;MLEAC=1;MLEAF=0.500;MQ=56.86;MQ0=3;MQRankSum=-4.062;QD=9.67;ReadPosRankSum=2.179;SOR=0.602 GT:AD:DP:GQ:PL 0/1:40,43:83:99:831,0,801
CP000253.1 2553939 . A G 788.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.953;DP=81;Dels=0.00;ExcessHet=3.0103;FS=1.841;HaplotypeScore=3.5144;MLEAC=1;MLEAF=0.500;MQ=56.78;MQ0=3;MQRankSum=-3.974;QD=9.98;ReadPosRankSum=3.462;SOR=0.608 GT:AD:DP:GQ:PL 0/1:37,42:81:99:817,0,749
CP000253.1 2553966 . T C 820.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.188;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.999;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=55.96;MQ0=3;MQRankSum=-3.086;QD=12.63;ReadPosRankSum=6.291;SOR=0.540 GT:AD:DP:GQ:PL 0/1:22,43:65:99:849,0,423
CP000253.1 2553971 . T A 784.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.907;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=1;MLEAF=0.500;MQ=55.89;MQ0=3;MQRankSum=-3.020;QD=12.26;ReadPosRankSum=6.302;SOR=0.610 GT:AD:DP:GQ:PL 0/1:21,43:64:99:813,0,380
CP000253.1 2553993 . A G 879.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.202;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=1;MLEAF=0.500;MQ=55.89;MQ0=3;MQRankSum=-2.695;QD=13.75;ReadPosRankSum=5.658;SOR=0.739 GT:AD:DP:GQ:PL 0/1:18,46:64:99:908,0,293
CP000253.1 2554002 . C A 65.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.434;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7748;MLEAC=1;MLEAF=0.500;MQ=55.10;MQ0=3;MQRankSum=1.862;QD=1.22;ReadPosRankSum=-4.110;SOR=0.650 GT:AD:DP:GQ:PL 0/1:46,8:54:94:94,0,883
CP000253.1 2554004 . T G 894.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.525;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7748;MLEAC=1;MLEAF=0.500;MQ=55.10;MQ0=3;MQRankSum=-1.965;QD=16.57;ReadPosRankSum=4.328;SOR=0.639 GT:AD:DP:GQ:PL 0/1:9,45:54:93:923,0,93
CP000253.1 2554005 . A G 886.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.089;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=1;MLEAF=0.500;MQ=55.10;MQ0=3;MQRankSum=-1.829;QD=16.42;ReadPosRankSum=4.135;SOR=0.739 GT:AD:DP:GQ:PL 0/1:8,46:54:88:915,0,88
CP000253.1 2554136 . T C 110.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.254;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=9.23;ReadPosRankSum=-1.092;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:139,0,138
CP000253.1 2554193 . A T 98.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.383;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=16.38;ReadPosRankSum=-0.210;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,5:6:9:126,9,0
CP000253.1 2554194 . A T 102.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.383;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.05;ReadPosRankSum=-0.210;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,5:6:9:130,9,0
CP000253.1 2554200 . A G 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2554207 . A G 173.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:202,15,0
CP000253.1 2554214 . T C 142.03 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.465;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.29;ReadPosRankSum=-0.366;SOR=1.108 GT:AD:DP:GQ:PL 1/1:1,6:7:12:170,12,0
CP000253.1 2554223 . C T 733.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,28:28:54:762,54,0
CP000253.1 2554281 . G C 2304.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0368;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.80;ReadPosRankSum=0.122;SOR=1.257 GT:AD:DP:GQ:PL 1/1:1,85:88:99:2333,166,0
CP000253.1 2554331 . A C 3494.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7357;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=1.204 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3523,250,0
CP000253.1 2554381 . C T 4493.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.198 GT:AD:DP:GQ:PL 1/1:0,177:177:99:4522,319,0
CP000253.1 2554386 . A C 4433.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2906;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=1.211 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4462,313,0
CP000253.1 2554387 . C T 4516.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.854;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4585;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.23;ReadPosRankSum=-1.646;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,178:179:99:4545,319,0
CP000253.1 2554392 . G C 4552.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=1.172 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4581,325,0
CP000253.1 2554444 . G A 6032.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.803;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.33;ReadPosRankSum=-1.432;SOR=0.699 GT:AD:DP:GQ:PL 1/1:1,247:250:99:6061,427,0
CP000253.1 2554468 . T C 6452.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9564;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6481,461,0
CP000253.1 2554474 . T C 6305.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.633;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.43;ReadPosRankSum=0.908;SOR=0.327 GT:AD:DP:GQ:PL 1/1:1,247:250:99:6334,428,0
CP000253.1 2554495 . T A 6153.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.259;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.12;ReadPosRankSum=-1.479;SOR=0.861 GT:AD:DP:GQ:PL 1/1:2,243:246:99:6182,445,0
CP000253.1 2554501 . T C 6501.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.827;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.1642;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.22;ReadPosRankSum=1.733;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,247:248:99:6530,472,0
CP000253.1 2554513 . T A 6378.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4342;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6407,457,0
CP000253.1 2554514 . G C 6293.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1615;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6322,445,0
CP000253.1 2554522 . G A 6468.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6497,466,0
CP000253.1 2554531 . A T 6471.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,245:246:99:6500,464,0
CP000253.1 2554537 . G T 6658.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1054;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6687,479,0
CP000253.1 2554705 . G T 5878.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.780;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.9610;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.90;ReadPosRankSum=0.786;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,226:227:99:5907,421,0
CP000253.1 2554825 . C T 5540.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4800;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.939 GT:AD:DP:GQ:PL 1/1:0,225:226:99:5569,394,0
CP000253.1 2554834 . C T 5619.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.771;DP=232;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7275;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=1.732;SOR=0.345 GT:AD:DP:GQ:PL 1/1:1,231:232:99:5648,400,0
CP000253.1 2554888 . T C 5771.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1614;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,241:241:99:5800,403,0
CP000253.1 2554951 . T A 4423.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,187:190:99:4452,313,0
CP000253.1 2554953 . A C 4551.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.979 GT:AD:DP:GQ:PL 1/1:0,188:189:99:4580,319,0
CP000253.1 2554954 . C T 4603.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8023;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4632,322,0
CP000253.1 2554966 . T C 4398.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4427,307,0
CP000253.1 2554969 . G A 4411.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4440,310,0
CP000253.1 2554977 . A G 4331.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.977 GT:AD:DP:GQ:PL 1/1:0,181:182:99:4360,301,0
CP000253.1 2554981 . T A 4324.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.642;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.03;ReadPosRankSum=-1.987;SOR=0.167 GT:AD:DP:GQ:PL 1/1:2,178:180:99:4353,304,0
CP000253.1 2554996 . T G 3967.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.667;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.05;ReadPosRankSum=0.440;SOR=0.716 GT:AD:DP:GQ:PL 1/1:2,163:165:99:3996,280,0
CP000253.1 2555011 . T C 3830.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.882;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.09;ReadPosRankSum=-1.538;SOR=0.361 GT:AD:DP:GQ:PL 1/1:1,158:160:99:3859,271,0
CP000253.1 2555082 . C T 1905.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6337;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1934,138,0
CP000253.1 2555249 . C T 13.72 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=6.86;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:40,3,0
CP000253.1 2555335 . A C 419.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:30:448,30,0
CP000253.1 2555387 . A T 2079.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8860;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2108,144,0
CP000253.1 2555841 . G A 1858.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1673;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,81:82:99:1887,135,0
CP000253.1 2556149 . G T 306.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.89;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:335,24,0
CP000253.1 2556232 . G A 217.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:246,18,0
CP000253.1 2556234 . A G 256.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.53;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:21:285,21,0
CP000253.1 2556285 . T G 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 2556457 . C T 391.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:420,30,0
CP000253.1 2556459 . C T 404.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:433,30,0
CP000253.1 2556462 . A G 404.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:433,30,0
CP000253.1 2556468 . A C 360.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.55;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:17:27:389,27,0
CP000253.1 2556471 . T G 322.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.394;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=18.99;ReadPosRankSum=1.023;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,16:17:25:351,25,0
CP000253.1 2556700 . C A 401.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.15;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:30:430,30,0
CP000253.1 2556717 . G A 455.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.04;MQ0=0;QD=21.70;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:484,33,0
CP000253.1 2556766 . G T 230.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.66;MQ0=0;QD=20.99;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:259,18,0
CP000253.1 2556781 . A T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.66;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 2556785 . C T 233.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.66;MQ0=0;QD=21.26;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:262,18,0
CP000253.1 2556788 . C T 235.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.66;MQ0=0;QD=21.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:264,18,0
CP000253.1 2556790 . A T 224.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.66;MQ0=0;QD=20.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:253,18,0
CP000253.1 2556793 . A C 215.77 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.53;MQ0=0;QD=21.58;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:12:15:217,15,0
CP000253.1 2556799 . G A 287.77 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=53.55;MQ0=0;QD=26.16;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:13:21:295,21,0
CP000253.1 2556805 . A G 232.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.618;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=53.25;MQ0=0;MQRankSum=-0.923;QD=9.70;ReadPosRankSum=4.025;SOR=0.755 GT:AD:DP:GQ:PL 0/1:13,11:24:99:261,0,229
CP000253.1 2556817 . T A 364.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.540;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=53.25;MQ0=0;MQRankSum=1.618;QD=15.20;ReadPosRankSum=2.607;SOR=0.628 GT:AD:DP:GQ:PL 0/1:7,17:24:95:393,0,95
CP000253.1 2556823 . G A 393.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.14;MQ0=0;QD=23.16;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:422,30,0
CP000253.1 2556829 . C T 238.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.645;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.82;MQ0=0;MQRankSum=-2.192;QD=14.92;ReadPosRankSum=2.466;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,10:16:99:267,0,104
CP000253.1 2556831 . A T 236.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.312;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.82;MQ0=0;MQRankSum=-2.192;QD=14.80;ReadPosRankSum=2.466;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,10:16:99:265,0,104
CP000253.1 2556837 . G A 233.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.352;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=54.82;MQ0=0;MQRankSum=-2.192;QD=14.61;ReadPosRankSum=2.466;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,10:16:99:262,0,104
CP000253.1 2556844 . C A 394.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=54.82;MQ0=0;QD=24.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:423,30,0
CP000253.1 2556849 . G T 399.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.82;MQ0=0;QD=24.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:428,30,0
CP000253.1 2556850 . T G 391.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.82;MQ0=0;QD=24.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:420,30,0
CP000253.1 2556864 . C T 402.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.82;MQ0=0;QD=25.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:431,30,0
CP000253.1 2556876 . T G 357.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.04;MQ0=0;QD=25.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:386,27,0
CP000253.1 2556877 . T A 355.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.04;MQ0=0;QD=25.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:384,27,0
CP000253.1 2556879 . A G 315.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.04;MQ0=0;QD=22.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:344,24,0
CP000253.1 2556880 . C T 349.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.04;MQ0=0;QD=24.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:27:378,27,0
CP000253.1 2556883 . T C 315.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.04;MQ0=0;QD=22.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:344,24,0
CP000253.1 2556885 . G T 312.90 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.549;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9977;MLEAC=1;MLEAF=0.500;MQ=54.82;MQ0=0;MQRankSum=-1.008;QD=19.56;ReadPosRankSum=2.463;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,14:16:15:341,0,15
CP000253.1 2556886 . G C 326.90 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.617;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9977;MLEAC=1;MLEAF=0.500;MQ=54.82;MQ0=0;MQRankSum=-1.008;QD=20.43;ReadPosRankSum=2.369;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,14:16:15:355,0,15
CP000253.1 2556892 . A G 415.28 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.149;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9973;MLEAC=1;MLEAF=0.500;MQ=52.80;MQ0=0;MQRankSum=-1.397;QD=18.88;ReadPosRankSum=0.991;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,20:22:9:443,0,9
CP000253.1 2556895 . A G 166.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.133;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9966;MLEAC=1;MLEAF=0.500;MQ=52.80;MQ0=0;MQRankSum=-1.270;QD=7.58;ReadPosRankSum=2.684;SOR=0.693 GT:AD:DP:GQ:PL 0/1:14,8:22:99:195,0,274
CP000253.1 2556901 . A G 480.53 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.680;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8921;MLEAC=1;MLEAF=0.500;MQ=53.14;MQ0=0;MQRankSum=-1.344;QD=20.89;ReadPosRankSum=0.833;SOR=0.784 GT:AD:DP:GQ:PL 0/1:2,21:23:3:507,0,3
CP000253.1 2556904 . A T 435.74 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.897;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.8929;MLEAC=1;MLEAF=0.500;MQ=53.14;MQ0=0;MQRankSum=-1.711;QD=18.95;ReadPosRankSum=1.720;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,20:23:6:463,0,6
CP000253.1 2556922 . C G 746.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5047;MLEAC=2;MLEAF=1.00;MQ=55.31;MQ0=0;QD=23.34;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:33:57:775,57,0
CP000253.1 2556934 . T A 731.90 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.086;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4941;MLEAC=2;MLEAF=1.00;MQ=55.45;MQ0=0;MQRankSum=-0.357;QD=21.53;ReadPosRankSum=-0.339;SOR=1.034 GT:AD:DP:GQ:PL 1/1:3,31:34:15:760,15,0
CP000253.1 2556955 . A G 659.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.304;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=54.12;MQ0=1;MQRankSum=-1.059;QD=20.60;ReadPosRankSum=1.349;SOR=1.071 GT:AD:DP:GQ:PL 1/1:3,29:32:9:687,9,0
CP000253.1 2556990 . T C 885.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=58.95;MQ0=0;QD=27.68;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:66:914,66,0
CP000253.1 2556991 . G A 878.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=58.95;MQ0=0;QD=27.46;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:66:907,66,0
CP000253.1 2556994 . A G 1166.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3655;MLEAC=2;MLEAF=1.00;MQ=59.24;MQ0=0;QD=27.13;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,43:44:87:1195,87,0
CP000253.1 2557009 . C T 1469.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=59.44;MQ0=0;QD=24.50;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1498,105,0
CP000253.1 2557021 . A G 1475.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=59.44;MQ0=0;QD=24.60;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1504,108,0
CP000253.1 2557024 . C T 1507.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=59.44;MQ0=0;QD=25.13;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1536,108,0
CP000253.1 2557031 . T C 1597.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=59.47;MQ0=0;QD=25.36;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1626,114,0
CP000253.1 2557243 . T C 34.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.090;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9040;MLEAC=1;MLEAF=0.500;MQ=59.93;MQ0=0;MQRankSum=-3.127;QD=0.35;ReadPosRankSum=-4.818;SOR=0.892 GT:AD:DP:GQ:PL 0/1:90,9:100:63:63,0,1915
CP000253.1 2557251 . T C 40.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.548;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4556;MLEAC=1;MLEAF=0.500;MQ=59.92;MQ0=0;MQRankSum=-3.109;QD=0.42;ReadPosRankSum=-4.538;SOR=0.866 GT:AD:DP:GQ:PL 0/1:89,9:98:69:69,0,1841
CP000253.1 2557255 . T A 37.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.930;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4282;MLEAC=1;MLEAF=0.500;MQ=59.92;MQ0=0;MQRankSum=-3.109;QD=0.39;ReadPosRankSum=-3.208;SOR=0.866 GT:AD:DP:GQ:PL 0/1:89,9:98:66:66,0,1879
CP000253.1 2557262 . G T 40.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.993;DP=98;Dels=0.00;ExcessHet=3.0103;FS=1.302;HaplotypeScore=8.1862;MLEAC=1;MLEAF=0.500;MQ=59.92;MQ0=0;MQRankSum=-2.933;QD=0.42;ReadPosRankSum=-2.214;SOR=1.085 GT:AD:DP:GQ:PL 0/1:88,10:98:69:69,0,1829
CP000253.1 2557264 . A G 34.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.109;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0802;MLEAC=1;MLEAF=0.500;MQ=59.93;MQ0=0;MQRankSum=-3.145;QD=0.35;ReadPosRankSum=-2.165;SOR=0.867 GT:AD:DP:GQ:PL 0/1:91,9:100:63:63,0,1888
CP000253.1 2557270 . A G 40.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.133;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6860;MLEAC=1;MLEAF=0.500;MQ=59.92;MQ0=0;MQRankSum=-3.073;QD=0.42;ReadPosRankSum=-1.975;SOR=0.866 GT:AD:DP:GQ:PL 0/1:87,9:96:69:69,0,1822
CP000253.1 2557273 . A G 29.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.719;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6075;MLEAC=1;MLEAF=0.500;MQ=59.92;MQ0=0;MQRankSum=-3.202;QD=0.32;ReadPosRankSum=-1.657;SOR=0.693 GT:AD:DP:GQ:PL 0/1:84,8:94:58:58,0,1728
CP000253.1 2557281 . T C 61.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.576;DP=79;Dels=0.00;ExcessHet=3.0103;FS=1.325;HaplotypeScore=15.1214;MLEAC=1;MLEAF=0.500;MQ=59.91;MQ0=0;MQRankSum=-2.749;QD=0.78;ReadPosRankSum=-3.051;SOR=0.848 GT:AD:DP:GQ:PL 0/1:70,9:79:90:90,0,1518
CP000253.1 2557285 . T C 67.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.530;DP=76;Dels=0.00;ExcessHet=3.0103;FS=1.331;HaplotypeScore=14.2179;MLEAC=1;MLEAF=0.500;MQ=59.90;MQ0=0;MQRankSum=-2.667;QD=0.90;ReadPosRankSum=-2.784;SOR=0.845 GT:AD:DP:GQ:PL 0/1:66,9:76:96:96,0,1457
CP000253.1 2557306 . T C 98.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.806;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2711;MLEAC=1;MLEAF=0.500;MQ=59.91;MQ0=0;MQRankSum=-2.450;QD=1.25;ReadPosRankSum=-0.532;SOR=0.728 GT:AD:DP:GQ:PL 0/1:68,11:79:99:127,0,1505
CP000253.1 2557312 . G A 63.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.750;DP=75;Dels=0.00;ExcessHet=3.0103;FS=1.403;HaplotypeScore=12.7024;MLEAC=1;MLEAF=0.500;MQ=59.90;MQ0=0;MQRankSum=-2.646;QD=0.86;ReadPosRankSum=0.083;SOR=0.741 GT:AD:DP:GQ:PL 0/1:65,9:75:92:92,0,1408
CP000253.1 2557318 . A G 64.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.412;DP=75;Dels=0.00;ExcessHet=3.0103;FS=1.403;HaplotypeScore=12.5027;MLEAC=1;MLEAF=0.500;MQ=59.90;MQ0=0;MQRankSum=-2.646;QD=0.88;ReadPosRankSum=0.530;SOR=0.741 GT:AD:DP:GQ:PL 0/1:65,9:75:93:93,0,1450
CP000253.1 2557321 . A T 70.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.505;DP=75;Dels=0.00;ExcessHet=3.0103;FS=1.393;HaplotypeScore=14.4749;MLEAC=1;MLEAF=0.500;MQ=59.90;MQ0=0;MQRankSum=-2.667;QD=0.94;ReadPosRankSum=0.596;SOR=0.762 GT:AD:DP:GQ:PL 0/1:66,9:75:99:99,0,1392
CP000253.1 2557324 . G A 110.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.860;DP=74;Dels=0.00;ExcessHet=3.0103;FS=1.282;HaplotypeScore=15.6095;MLEAC=1;MLEAF=0.500;MQ=59.90;MQ0=0;MQRankSum=-2.355;QD=1.50;ReadPosRankSum=0.487;SOR=0.698 GT:AD:DP:GQ:PL 0/1:63,11:74:99:139,0,1393
CP000253.1 2557382 . T C 230.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.664;DP=52;Dels=0.00;ExcessHet=3.0103;FS=2.679;HaplotypeScore=9.9173;MLEAC=1;MLEAF=0.500;MQ=59.86;MQ0=0;MQRankSum=-1.528;QD=4.44;ReadPosRankSum=0.566;SOR=0.559 GT:AD:DP:GQ:PL 0/1:37,15:52:99:259,0,880
CP000253.1 2557389 . C T 262.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.280;DP=52;Dels=0.00;ExcessHet=3.0103;FS=2.577;HaplotypeScore=9.1344;MLEAC=1;MLEAF=0.500;MQ=59.86;MQ0=0;MQRankSum=-1.394;QD=5.05;ReadPosRankSum=0.469;SOR=0.530 GT:AD:DP:GQ:PL 0/1:35,17:52:99:291,0,811
CP000253.1 2557394 . G A 268.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.769;DP=52;Dels=0.00;ExcessHet=3.0103;FS=2.577;HaplotypeScore=4.1373;MLEAC=1;MLEAF=0.500;MQ=59.86;MQ0=0;MQRankSum=-1.394;QD=5.17;ReadPosRankSum=0.488;SOR=0.530 GT:AD:DP:GQ:PL 0/1:35,17:52:99:297,0,834
CP000253.1 2557444 . G A 121.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.069;DP=31;Dels=0.00;ExcessHet=3.0103;FS=1.594;HaplotypeScore=1.6988;MLEAC=1;MLEAF=0.500;MQ=59.39;MQ0=0;MQRankSum=-2.757;QD=3.93;ReadPosRankSum=2.117;SOR=0.668 GT:AD:DP:GQ:PL 0/1:22,9:31:99:150,0,528
CP000253.1 2557506 . T C 38.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.180;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7885;MLEAC=1;MLEAF=0.500;MQ=58.72;MQ0=0;MQRankSum=-1.732;QD=4.31;ReadPosRankSum=-0.319;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,3:9:67:67,0,150
CP000253.1 2557514 . G A 121.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9998;MLEAC=1;MLEAF=0.500;MQ=58.35;MQ0=0;MQRankSum=1.981;QD=17.40;ReadPosRankSum=0.792;SOR=1.981 GT:AD:DP:GQ:PL 0/1:2,5:7:30:150,0,30
CP000253.1 2557516 . T C 115.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9998;MLEAC=1;MLEAF=0.500;MQ=58.35;MQ0=0;MQRankSum=1.981;QD=16.54;ReadPosRankSum=1.068;SOR=1.981 GT:AD:DP:GQ:PL 0/1:2,5:7:30:144,0,30
CP000253.1 2557523 . A T 85.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.07;MQ0=0;MQRankSum=1.834;QD=14.29;ReadPosRankSum=1.834;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:33:114,0,33
CP000253.1 2557525 . T A 84.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=58.07;MQ0=0;MQRankSum=1.834;QD=14.13;ReadPosRankSum=1.834;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:33:113,0,33
CP000253.1 2557617 . T C 205.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.076;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-2.354;SOR=0.859 GT:AD:DP:GQ:PL 0/1:6,11:17:99:234,0,140
CP000253.1 2557639 . T C 247.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.054;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=13.04;ReadPosRankSum=-0.948;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,13:19:99:276,0,137
CP000253.1 2557653 . T C 286.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.119;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=12.47;ReadPosRankSum=0.427;SOR=0.818 GT:AD:DP:GQ:PL 0/1:8,15:23:99:315,0,176
CP000253.1 2557947 . A G 168.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:197,15,0
CP000253.1 2557966 . C T 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 2558126 . T G 1099.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1128,78,0
CP000253.1 2559593 . T C 976.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:69:1005,69,0
CP000253.1 2559609 . A G 936.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7046;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:41:66:965,66,0
CP000253.1 2559611 . G A 978.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:69:1007,69,0
CP000253.1 2559740 . G A 498.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:527,36,0
CP000253.1 2560042 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2560045 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.56;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2560051 . T A 56.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.56;MQ0=0;QD=14.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:84,6,0
CP000253.1 2560074 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560078 . G A 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 2560085 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560099 . G A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560102 . C T 87.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=17.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:115,9,0
CP000253.1 2560105 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560106 . T C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560107 . G T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560116 . G A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560117 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560122 . G C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.91;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560138 . C T 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.79;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 2560144 . A G 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.79;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 2560153 . G A 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.79;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2560180 . A G 141.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.70;MQ0=0;QD=23.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:169,12,0
CP000253.1 2560192 . C T 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 2560195 . A G 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 2560204 . A G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560216 . A C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2560221 . T C 139.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:167,12,0
CP000253.1 2560249 . T C 383.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.32;MQ0=0;QD=23.99;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:17:30:412,30,0
CP000253.1 2560297 . G C 763.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.80;MQ0=0;QD=24.64;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,31:31:60:792,60,0
CP000253.1 2560300 . A G 759.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.80;MQ0=0;QD=24.51;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,31:31:60:788,60,0
CP000253.1 2560305 . G T 767.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=51.80;MQ0=0;QD=24.77;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,31:31:60:796,60,0
CP000253.1 2560309 . A G 773.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=51.80;MQ0=0;QD=24.96;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,31:31:60:802,60,0
CP000253.1 2560315 . T C 775.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=51.80;MQ0=0;QD=25.02;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,31:31:60:804,60,0
CP000253.1 2560324 . A T 775.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=51.80;MQ0=0;QD=25.02;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,31:31:60:804,60,0
CP000253.1 2560334 . T C 781.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.80;MQ0=0;QD=25.22;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,31:31:60:810,60,0
CP000253.1 2560335 . T G 763.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.80;MQ0=0;QD=24.64;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,31:31:60:792,60,0
CP000253.1 2560351 . A G 720.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=51.19;MQ0=0;QD=24.85;SOR=1.460 GT:AD:DP:GQ:PL 1/1:0,29:29:57:749,57,0
CP000253.1 2560360 . T A 693.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.93;MQ0=0;QD=24.78;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,28:28:54:722,54,0
CP000253.1 2560509 . A T 2106.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=55.50;MQ0=0;QD=23.15;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2135,147,0
CP000253.1 2560558 . A G 2162.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8823;MLEAC=2;MLEAF=1.00;MQ=55.52;MQ0=0;QD=23.26;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2191,151,0
CP000253.1 2560582 . G A 1945.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=55.31;MQ0=0;QD=21.86;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:89:99:1974,138,0
CP000253.1 2560595 . A G 1766.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=54.61;MQ0=0;QD=22.95;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,77:78:99:1795,123,0
CP000253.1 2560600 . T C 1735.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=54.46;MQ0=0;QD=22.84;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1764,120,0
CP000253.1 2560604 . C T 1599.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=53.96;MQ0=0;QD=22.85;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1628,111,0
CP000253.1 2560614 . T G 882.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.74;MQ0=0;QD=22.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:63:911,63,0
CP000253.1 2560615 . G A 932.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.74;MQ0=0;QD=23.32;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:66:961,66,0
CP000253.1 2560618 . G A 894.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.74;MQ0=0;QD=22.37;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:63:923,63,0
CP000253.1 2560621 . A T 923.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.74;MQ0=0;QD=23.09;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:66:952,66,0
CP000253.1 2560622 . T G 928.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.74;MQ0=0;QD=23.22;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:66:957,66,0
CP000253.1 2560624 . T G 930.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=49.74;MQ0=0;QD=23.27;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:66:959,66,0
CP000253.1 2560636 . A G 940.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7871;MLEAC=2;MLEAF=1.00;MQ=50.02;MQ0=0;QD=23.52;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:41:69:969,69,0
CP000253.1 2560639 . G A 806.56 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.334;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7871;MLEAC=1;MLEAF=0.500;MQ=50.02;MQ0=0;MQRankSum=-0.778;QD=19.67;ReadPosRankSum=0.912;SOR=0.968 GT:AD:DP:GQ:PL 0/1:2,39:41:7:834,0,7
CP000253.1 2560647 . C T 925.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9989;MLEAC=2;MLEAF=1.00;MQ=50.02;MQ0=0;QD=22.58;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:66:954,66,0
CP000253.1 2560652 . G A 949.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=50.02;MQ0=0;QD=23.17;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:69:978,69,0
CP000253.1 2560668 . C T 829.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.726;DP=38;Dels=0.00;ExcessHet=3.0103;FS=3.641;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=51.40;MQ0=0;MQRankSum=-1.320;QD=21.84;ReadPosRankSum=1.736;SOR=0.840 GT:AD:DP:GQ:PL 1/1:1,37:38:26:858,26,0
CP000253.1 2560715 . G A 42.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.385;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=7.13;ReadPosRankSum=-0.598;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:8:71:71,0,73
CP000253.1 2560723 . C T 48.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2524;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=6.10;ReadPosRankSum=1.168;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:77:77,0,77
CP000253.1 2560732 . A C 83.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.040;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=9.31;ReadPosRankSum=-1.495;SOR=1.022 GT:AD:DP:GQ:PL 0/1:4,5:9:70:112,0,70
CP000253.1 2560814 . C A 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 2560879 . C A 42.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.301;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=1;MLEAF=0.500;MQ=53.50;MQ0=0;MQRankSum=-2.965;QD=3.89;ReadPosRankSum=-0.179;SOR=0.495 GT:AD:DP:GQ:PL 0/1:7,4:11:71:71,0,157
CP000253.1 2560881 . T A 39.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.191;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8055;MLEAC=1;MLEAF=0.500;MQ=51.46;MQ0=0;MQRankSum=-2.362;QD=3.31;ReadPosRankSum=0.327;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,4:12:68:68,0,176
CP000253.1 2560888 . G A 98.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8055;MLEAC=1;MLEAF=0.500;MQ=49.62;MQ0=0;MQRankSum=-2.823;QD=9.88;ReadPosRankSum=-1.718;SOR=1.329 GT:AD:DP:GQ:PL 0/1:4,6:11:93:127,0,93
CP000253.1 2560894 . T C 76.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.219;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8055;MLEAC=1;MLEAF=0.500;MQ=49.03;MQ0=0;MQRankSum=-1.550;QD=6.40;ReadPosRankSum=-0.079;SOR=0.760 GT:AD:DP:GQ:PL 0/1:7,5:12:99:105,0,166
CP000253.1 2560911 . T C 222.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.662;DP=16;Dels=0.00;ExcessHet=3.0103;FS=2.246;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=51.99;MQ0=0;MQRankSum=-2.126;QD=13.92;ReadPosRankSum=-1.372;SOR=1.139 GT:AD:DP:GQ:PL 0/1:5,11:16:99:251,0,100
CP000253.1 2560915 . T G 216.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.587;DP=19;Dels=0.00;ExcessHet=3.0103;FS=1.820;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=53.33;MQ0=0;MQRankSum=-2.627;QD=11.41;ReadPosRankSum=0.374;SOR=1.270 GT:AD:DP:GQ:PL 0/1:8,11:19:99:245,0,177
CP000253.1 2560916 . G A 148.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.455;DP=19;Dels=0.00;ExcessHet=3.0103;FS=1.820;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=53.33;MQ0=0;MQRankSum=2.722;QD=7.83;ReadPosRankSum=-0.291;SOR=0.330 GT:AD:DP:GQ:PL 0/1:11,8:19:99:177,0,245
CP000253.1 2560921 . C T 212.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.468;DP=20;Dels=0.00;ExcessHet=3.0103;FS=1.848;HaplotypeScore=1.9788;MLEAC=1;MLEAF=0.500;MQ=53.69;MQ0=0;MQRankSum=-2.766;QD=10.64;ReadPosRankSum=1.070;SOR=1.180 GT:AD:DP:GQ:PL 0/1:9,11:20:99:241,0,213
CP000253.1 2560926 . A G 213.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.489;DP=20;Dels=0.00;ExcessHet=3.0103;FS=1.820;HaplotypeScore=6.9570;MLEAC=1;MLEAF=0.500;MQ=53.69;MQ0=0;MQRankSum=-2.766;QD=10.69;ReadPosRankSum=1.070;SOR=1.180 GT:AD:DP:GQ:PL 0/1:9,11:20:99:242,0,204
CP000253.1 2560933 . G T 213.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.146;DP=20;Dels=0.00;ExcessHet=3.0103;FS=1.848;HaplotypeScore=16.9134;MLEAC=1;MLEAF=0.500;MQ=53.69;MQ0=0;MQRankSum=-2.766;QD=10.69;ReadPosRankSum=1.223;SOR=1.180 GT:AD:DP:GQ:PL 0/1:9,11:20:99:242,0,217
CP000253.1 2560934 . T G 213.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.272;DP=20;Dels=0.00;ExcessHet=3.0103;FS=1.848;HaplotypeScore=16.9134;MLEAC=1;MLEAF=0.500;MQ=53.69;MQ0=0;MQRankSum=-2.766;QD=10.69;ReadPosRankSum=1.223;SOR=1.180 GT:AD:DP:GQ:PL 0/1:9,11:20:99:242,0,217
CP000253.1 2560935 . G A 207.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.951;DP=24;Dels=0.00;ExcessHet=3.0103;FS=3.524;HaplotypeScore=16.9134;MLEAC=1;MLEAF=0.500;MQ=54.79;MQ0=0;MQRankSum=-3.248;QD=8.66;ReadPosRankSum=2.274;SOR=1.202 GT:AD:DP:GQ:PL 0/1:13,11:24:99:236,0,301
CP000253.1 2560936 . T C 161.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.057;DP=29;Dels=0.00;ExcessHet=3.0103;FS=1.550;HaplotypeScore=17.9132;MLEAC=1;MLEAF=0.500;MQ=55.51;MQ0=0;MQRankSum=-0.204;QD=5.58;ReadPosRankSum=-1.454;SOR=1.025 GT:AD:DP:GQ:PL 0/1:19,10:29:99:190,0,427
CP000253.1 2560941 . T C 230.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.107;DP=43;Dels=0.00;ExcessHet=3.0103;FS=1.267;HaplotypeScore=23.8911;MLEAC=1;MLEAF=0.500;MQ=57.01;MQ0=0;MQRankSum=-0.325;QD=5.37;ReadPosRankSum=-0.378;SOR=0.929 GT:AD:DP:GQ:PL 0/1:29,14:43:99:259,0,631
CP000253.1 2560942 . A T 26.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.424;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9123;MLEAC=1;MLEAF=0.500;MQ=57.27;MQ0=0;MQRankSum=-4.504;QD=0.57;ReadPosRankSum=3.026;SOR=0.648 GT:AD:DP:GQ:PL 0/1:41,6:47:55:55,0,878
CP000253.1 2560948 . T G 317.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.443;DP=48;Dels=0.00;ExcessHet=3.0103;FS=1.216;HaplotypeScore=12.9557;MLEAC=1;MLEAF=0.500;MQ=57.33;MQ0=0;MQRankSum=-1.978;QD=7.75;ReadPosRankSum=-0.700;SOR=0.853 GT:AD:DP:GQ:PL 0/1:23,18:48:99:346,0,500
CP000253.1 2560966 . G A 1262.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7435;MLEAC=2;MLEAF=1.00;MQ=57.43;MQ0=0;QD=23.83;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1291,90,0
CP000253.1 2560972 . T C 49.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.226;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7435;MLEAC=1;MLEAF=0.500;MQ=57.44;MQ0=0;MQRankSum=-3.736;QD=0.87;ReadPosRankSum=2.767;SOR=0.850 GT:AD:DP:GQ:PL 0/1:50,7:57:78:78,0,1114
CP000253.1 2560974 . T A 748.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.940;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7435;MLEAC=1;MLEAF=0.500;MQ=57.44;MQ0=0;MQRankSum=1.346;QD=13.14;ReadPosRankSum=0.978;SOR=0.587 GT:AD:DP:GQ:PL 0/1:22,35:57:99:777,0,410
CP000253.1 2560975 . T C 571.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.878;DP=57;Dels=0.00;ExcessHet=3.0103;FS=1.007;HaplotypeScore=15.7435;MLEAC=1;MLEAF=0.500;MQ=57.44;MQ0=0;MQRankSum=3.774;QD=10.03;ReadPosRankSum=-0.872;SOR=0.518 GT:AD:DP:GQ:PL 0/1:29,28:57:99:600,0,586
CP000253.1 2560980 . A G 745.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.319;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8494;MLEAC=1;MLEAF=0.500;MQ=57.44;MQ0=0;MQRankSum=1.346;QD=13.08;ReadPosRankSum=0.912;SOR=0.587 GT:AD:DP:GQ:PL 0/1:22,35:57:99:774,0,414
CP000253.1 2560984 . A C 1345.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8492;MLEAC=2;MLEAF=1.00;MQ=57.44;MQ0=0;QD=23.61;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1374,96,0
CP000253.1 2560987 . T A 1335.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8717;MLEAC=2;MLEAF=1.00;MQ=57.44;MQ0=0;QD=23.43;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1364,96,0
CP000253.1 2560993 . C G 558.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.157;DP=57;Dels=0.00;ExcessHet=3.0103;FS=1.007;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=57.44;MQ0=0;MQRankSum=-3.752;QD=9.80;ReadPosRankSum=0.857;SOR=0.906 GT:AD:DP:GQ:PL 0/1:28,29:57:99:587,0,604
CP000253.1 2560996 . A G 559.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.705;DP=57;Dels=0.00;ExcessHet=3.0103;FS=1.007;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=57.44;MQ0=0;MQRankSum=-3.752;QD=9.82;ReadPosRankSum=0.600;SOR=0.906 GT:AD:DP:GQ:PL 0/1:28,29:57:99:588,0,601
CP000253.1 2561002 . T A 559.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.136;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.49;MQ0=0;MQRankSum=-3.812;QD=9.65;ReadPosRankSum=1.995;SOR=0.831 GT:AD:DP:GQ:PL 0/1:29,29:58:99:588,0,608
CP000253.1 2561007 . C T 601.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.349;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.57;MQ0=0;MQRankSum=-3.674;QD=10.03;ReadPosRankSum=1.467;SOR=0.818 GT:AD:DP:GQ:PL 0/1:29,31:60:99:630,0,604
CP000253.1 2561011 . C T 601.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.945;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=57.57;MQ0=0;MQRankSum=-3.674;QD=10.03;ReadPosRankSum=1.542;SOR=0.818 GT:AD:DP:GQ:PL 0/1:29,31:60:99:630,0,599
CP000253.1 2561014 . C T 598.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.141;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=57.61;MQ0=0;MQRankSum=-3.731;QD=9.82;ReadPosRankSum=1.829;SOR=0.752 GT:AD:DP:GQ:PL 0/1:30,31:61:99:627,0,639
CP000253.1 2561019 . T G 598.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.490;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=57.61;MQ0=0;MQRankSum=-3.731;QD=9.82;ReadPosRankSum=1.816;SOR=0.752 GT:AD:DP:GQ:PL 0/1:30,31:61:99:627,0,639
CP000253.1 2561038 . G A 95.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9763;MLEAC=1;MLEAF=0.500;MQ=57.57;MQ0=0;MQRankSum=-2.811;QD=1.60;ReadPosRankSum=0.367;SOR=0.619 GT:AD:DP:GQ:PL 0/1:50,10:60:99:124,0,1107
CP000253.1 2561043 . C T 532.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.257;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9763;MLEAC=1;MLEAF=0.500;MQ=57.57;MQ0=0;MQRankSum=3.574;QD=8.88;ReadPosRankSum=-1.135;SOR=0.582 GT:AD:DP:GQ:PL 0/1:32,28:60:99:561,0,637
CP000253.1 2561044 . A G 1400.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9763;MLEAC=2;MLEAF=1.00;MQ=57.57;MQ0=0;QD=23.35;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1429,99,0
CP000253.1 2561047 . A T 557.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.528;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.940;HaplotypeScore=10.8704;MLEAC=1;MLEAF=0.500;MQ=57.65;MQ0=0;MQRankSum=-3.912;QD=9.00;ReadPosRankSum=2.384;SOR=0.826 GT:AD:DP:GQ:PL 0/1:32,30:62:99:586,0,684
CP000253.1 2561048 . C T 557.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.697;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8704;MLEAC=1;MLEAF=0.500;MQ=57.65;MQ0=0;MQRankSum=-3.912;QD=9.00;ReadPosRankSum=2.384;SOR=0.826 GT:AD:DP:GQ:PL 0/1:32,30:62:99:586,0,678
CP000253.1 2561050 . T C 1438.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=57.65;MQ0=0;QD=23.21;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1467,102,0
CP000253.1 2561059 . C T 1353.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.53;MQ0=0;QD=22.95;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:96:1382,96,0
CP000253.1 2561065 . T G 1297.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.44;MQ0=0;QD=22.77;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1326,93,0
CP000253.1 2561077 . C A 1302.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.44;MQ0=0;QD=22.86;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1331,93,0
CP000253.1 2561083 . C A 1302.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.40;MQ0=0;QD=23.26;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1331,93,0
CP000253.1 2561149 . G A 262.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.129;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=1;MLEAF=0.500;MQ=57.69;MQ0=0;MQRankSum=2.118;QD=11.42;ReadPosRankSum=0.652;SOR=0.765 GT:AD:DP:GQ:PL 0/1:10,13:23:99:291,0,199
CP000253.1 2561152 . T C 286.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.197;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=1;MLEAF=0.500;MQ=57.69;MQ0=0;MQRankSum=2.118;QD=12.47;ReadPosRankSum=0.839;SOR=0.765 GT:AD:DP:GQ:PL 0/1:10,13:23:99:315,0,196
CP000253.1 2561160 . T C 286.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.323;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8939;MLEAC=1;MLEAF=0.500;MQ=58.88;MQ0=0;MQRankSum=1.807;QD=13.03;ReadPosRankSum=1.004;SOR=0.941 GT:AD:DP:GQ:PL 0/1:9,13:22:99:315,0,177
CP000253.1 2561164 . G A,T 409.77 . AC=1,1;AF=0.500,0.500;AN=2;BaseQRankSum=-0.742;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1,1;MLEAF=0.500,0.500;MQ=58.82;MQ0=0;MQRankSum=3.402;QD=19.51;ReadPosRankSum=1.573;SOR=0.420 GT:AD:DP:GQ:PL 1/2:1,12,8:21:99:438,129,143,274,0,300
CP000253.1 2561200 . G A,C 480.77 . AC=1,1;AF=0.500,0.500;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;MQ0=0;QD=22.89;SOR=0.990 GT:AD:DP:GQ:PL 1/2:0,12,9:21:99:509,200,176,309,0,294
CP000253.1 2561213 . T C 140.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.273;DP=27;Dels=0.00;ExcessHet=3.0103;FS=3.488;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=5.21;ReadPosRankSum=0.026;SOR=0.634 GT:AD:DP:GQ:PL 0/1:18,9:27:99:169,0,412
CP000253.1 2561214 . T G 105.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.283;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=4.23;ReadPosRankSum=-0.088;SOR=0.425 GT:AD:DP:GQ:PL 0/1:17,8:25:99:134,0,415
CP000253.1 2561230 . T C 770.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:57:799,57,0
CP000253.1 2561287 . C T 1350.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1379,96,0
CP000253.1 2561344 . T G 1796.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.826;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8671;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.04;ReadPosRankSum=0.644;SOR=0.255 GT:AD:DP:GQ:PL 1/1:1,77:78:99:1825,129,0
CP000253.1 2561405 . G T 164.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.433;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7440;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=1.53;ReadPosRankSum=-6.238;SOR=0.693 GT:AD:DP:GQ:PL 0/1:92,16:108:99:193,0,1917
CP000253.1 2561407 . G C 1925.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.675;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.83;ReadPosRankSum=6.247;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,92:108:99:1954,0,183
CP000253.1 2561413 . G A 1834.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.051;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6275;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=16.99;ReadPosRankSum=5.842;SOR=0.693 GT:AD:DP:GQ:PL 0/1:18,90:108:99:1863,0,233
CP000253.1 2561416 . G T 1865.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.199;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6338;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.44;ReadPosRankSum=4.866;SOR=0.593 GT:AD:DP:GQ:PL 0/1:17,90:108:99:1894,0,222
CP000253.1 2561419 . C T 1853.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.951;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2949;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.16;ReadPosRankSum=4.651;SOR=0.693 GT:AD:DP:GQ:PL 0/1:18,90:108:99:1882,0,229
CP000253.1 2561433 . G C 1940.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.887;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4159;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.81;ReadPosRankSum=3.786;SOR=0.760 GT:AD:DP:GQ:PL 0/1:18,91:110:99:1969,0,221
CP000253.1 2561443 . G A 1852.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.442;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.16;ReadPosRankSum=3.734;SOR=0.738 GT:AD:DP:GQ:PL 0/1:18,90:108:99:1881,0,225
CP000253.1 2561449 . C T 1882.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.959;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4891;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.12;ReadPosRankSum=2.930;SOR=0.737 GT:AD:DP:GQ:PL 0/1:18,92:110:99:1911,0,234
CP000253.1 2561485 . C T 1925.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0799;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1954,135,0
CP000253.1 2561487 . G A 1968.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0799;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,85:85:99:1997,138,0
CP000253.1 2561527 . T C 1890.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.791;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.78;ReadPosRankSum=1.191;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,82:83:99:1919,132,0
CP000253.1 2561560 . C G 1551.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1580,108,0
CP000253.1 2561596 . G A 1018.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6809;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:43:72:1047,72,0
CP000253.1 2561606 . C T 836.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:60:865,60,0
CP000253.1 2561609 . T C 839.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:60:868,60,0
CP000253.1 2561614 . G A 793.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:57:822,57,0
CP000253.1 2561686 . T C 139.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.81;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:167,12,0
CP000253.1 2561939 . G T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2561943 . A G 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2561973 . C G 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2562027 . T C 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2562161 . C T 187.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.88;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:216,15,0
CP000253.1 2562231 . G A 180.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:209,15,0
CP000253.1 2562289 . T C 134.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:162,12,0
CP000253.1 2562345 . A G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2562450 . C T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2562453 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2562518 . G A 97.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:125,9,0
CP000253.1 2562726 . C T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2562771 . T A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2562773 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2562789 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2562792 . C T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2562794 . C A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2562798 . G A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2562801 . C T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2562861 . G A 100.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:128,9,0
CP000253.1 2563131 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2563151 . A C 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2563416 . T C 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 2563425 . C T 311.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.27;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:340,24,0
CP000253.1 2563602 . T C 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 2564069 . C T 1818.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1847,126,0
CP000253.1 2564274 . G T 1250.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3962;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.56;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:87:1279,87,0
CP000253.1 2564284 . C T 1163.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:81:1192,81,0
CP000253.1 2564307 . G A 735.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,30:31:54:764,54,0
CP000253.1 2564412 . C T 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 2564514 . C T 62.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:90,6,0
CP000253.1 2564595 . A T 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 2564616 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:309,21,0
CP000253.1 2564628 . A G 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2564670 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2564732 . G C 99.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.86;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:127,9,0
CP000253.1 2564745 . C A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2564751 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2564753 . G T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2564898 . G A 675.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:704,48,0
CP000253.1 2564942 . C T 996.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.15;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:69:1025,69,0
CP000253.1 2564950 . T G 1032.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.785;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.52;ReadPosRankSum=-0.867;SOR=0.289 GT:AD:DP:GQ:PL 1/1:1,47:48:72:1061,72,0
CP000253.1 2564980 . A G 1167.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:54:81:1196,81,0
CP000253.1 2565000 . A G 1180.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.09;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,56:56:81:1209,81,0
CP000253.1 2565040 . G T 1265.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.21;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:87:1294,87,0
CP000253.1 2565066 . C T 1216.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:84:1245,84,0
CP000253.1 2565097 . C T 1149.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:81:1178,81,0
CP000253.1 2565108 . T C 1056.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1085,75,0
CP000253.1 2565495 . C A 824.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:60:853,60,0
CP000253.1 2565752 . A T 1891.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7528;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:1920,132,0
CP000253.1 2565836 . G T 1671.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.057;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1112;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.59;ReadPosRankSum=1.312;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,73:75:99:1700,120,0
CP000253.1 2565857 . T C 1838.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0176;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,78:80:99:1867,132,0
CP000253.1 2565905 . C T 1744.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.860;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3265;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.90;ReadPosRankSum=0.166;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,72:73:99:1773,123,0
CP000253.1 2565926 . T C 1445.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1474,105,0
CP000253.1 2566013 . T A 1145.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:84:1174,84,0
CP000253.1 2566037 . G A 1081.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:44:78:1110,78,0
CP000253.1 2566154 . G A 2040.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,79:80:99:2069,147,0
CP000253.1 2566173 . C A 2105.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,85:86:99:2134,153,0
CP000253.1 2566208 . A T 2510.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2539,178,0
CP000253.1 2566235 . C T 3589.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,151:151:99:3618,250,0
CP000253.1 2566238 . C T 3562.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8163;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3591,250,0
CP000253.1 2566337 . T A 3758.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3787,265,0
CP000253.1 2566376 . C T 3805.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3834,265,0
CP000253.1 2566527 . G A 3283.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,130:131:99:3312,232,0
CP000253.1 2566541 . G A 3612.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9054;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,146:147:99:3641,253,0
CP000253.1 2566805 . T A 4012.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4041,280,0
CP000253.1 2566811 . G T 3237.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.195;DP=136;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.98;ReadPosRankSum=2.415;SOR=0.941 GT:AD:DP:GQ:PL 1/1:2,133:135:99:3266,190,0
CP000253.1 2566814 . A G 3187.75 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.354;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4928;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.61;ReadPosRankSum=2.024;SOR=0.516 GT:AD:DP:GQ:PL 1/1:3,132:136:99:3216,191,0
CP000253.1 2566817 . G A 3224.61 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.992;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.06;ReadPosRankSum=-0.103;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,133:134:99:3253,200,0
CP000253.1 2566824 . A G 3228.29 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.048;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.64;ReadPosRankSum=-0.384;SOR=0.341 GT:AD:DP:GQ:PL 1/1:1,130:132:99:3256,227,0
CP000253.1 2566826 . T A 3218.75 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.114;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=-0.384;SOR=0.324 GT:AD:DP:GQ:PL 1/1:1,130:132:99:3247,226,0
CP000253.1 2566827 . G T 3187.75 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.996;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.52;ReadPosRankSum=-0.453;SOR=0.334 GT:AD:DP:GQ:PL 1/1:1,129:132:99:3216,226,0
CP000253.1 2566832 . A T 3197.05 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.944;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=-0.565;SOR=0.332 GT:AD:DP:GQ:PL 1/1:1,131:132:99:3225,226,0
CP000253.1 2566838 . C A 3260.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3289,229,0
CP000253.1 2566839 . A C 3259.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3288,229,0
CP000253.1 2566841 . A T 3230.05 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3259,229,0
CP000253.1 2566877 . C G 3622.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6161;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3651,253,0
CP000253.1 2566943 . G A 2519.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2548,175,0
CP000253.1 2566956 . C T 2087.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1967;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2116,144,0
CP000253.1 2567061 . A G 751.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.3548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:54:780,54,0
CP000253.1 2567149 . G A 143.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:171,12,0
CP000253.1 2567475 . G A 616.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:45:645,45,0
CP000253.1 2567532 . T C 795.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:57:824,57,0
CP000253.1 2567705 . A T 348.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:377,27,0
CP000253.1 2567748 . A T 399.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:428,30,0
CP000253.1 2567755 . C T 402.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:431,30,0
CP000253.1 2567894 . C T 359.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:388,27,0
CP000253.1 2567899 . T A 355.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:27:384,27,0
CP000253.1 2567913 . G A 312.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:341,24,0
CP000253.1 2567966 . A C 355.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.602;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.93;ReadPosRankSum=1.229;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,16:17:27:384,27,0
CP000253.1 2568003 . A T 402.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:431,30,0
CP000253.1 2568029 . A G 256.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:285,21,0
CP000253.1 2568030 . G T 261.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:290,21,0
CP000253.1 2568095 . T C 269.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:298,21,0
CP000253.1 2568104 . C T 259.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:288,21,0
CP000253.1 2568118 . T C 296.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:24:325,24,0
CP000253.1 2568155 . G T 379.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:30:408,30,0
CP000253.1 2568227 . C A 44.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0
CP000253.1 2568244 . A T 45.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=15.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:73,6,0
CP000253.1 2568245 . C T 41.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:69,6,0
CP000253.1 2568296 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2568413 . T G 262.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:291,21,0
CP000253.1 2568427 . A T 317.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:346,24,0
CP000253.1 2568428 . A T 316.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:24:345,24,0
CP000253.1 2568434 . A G 359.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.659;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.16;ReadPosRankSum=1.345;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,16:17:27:388,27,0
CP000253.1 2568474 . T C 490.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.859;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.31;ReadPosRankSum=1.738;SOR=0.365 GT:AD:DP:GQ:PL 1/1:1,21:22:36:519,36,0
CP000253.1 2568487 . A G 451.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.659;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.53;ReadPosRankSum=-1.580;SOR=0.365 GT:AD:DP:GQ:PL 1/1:1,21:22:33:480,33,0
CP000253.1 2568496 . A G 455.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:36:484,36,0
CP000253.1 2568536 . T A 888.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.68;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:63:917,63,0
CP000253.1 2568555 . C T 1547.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=61.0550;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1576,111,0
CP000253.1 2568570 . A G 1768.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:80:99:1797,123,0
CP000253.1 2568680 . A C 2160.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2189,151,0
CP000253.1 2568701 . A G 1837.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7798;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1866,129,0
CP000253.1 2568729 . A T 1174.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1203,84,0
CP000253.1 2568744 . T C 1063.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1092,75,0
CP000253.1 2568786 . C T 648.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.859;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.17;ReadPosRankSum=1.741;SOR=0.568 GT:AD:DP:GQ:PL 1/1:1,27:28:48:677,48,0
CP000253.1 2568795 . C T 665.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:694,48,0
CP000253.1 2568798 . C T 699.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:728,51,0
CP000253.1 2568907 . A G 866.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:63:895,63,0
CP000253.1 2568960 . A G 961.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:38:69:990,69,0
CP000253.1 2569098 . A G 998.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1027,72,0
CP000253.1 2569551 . A G 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 2569617 . A G 253.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:282,21,0
CP000253.1 2569722 . T A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2569727 . T A 146.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:174,12,0
CP000253.1 2569785 . A C 143.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:171,12,0
CP000253.1 2571029 . C T 10.20 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.586;DP=92;Dels=0.00;ExcessHet=3.0103;FS=2.492;HaplotypeScore=12.9489;MLEAC=1;MLEAF=0.500;MQ=20.00;MQ0=65;MQRankSum=1.607;QD=0.11;ReadPosRankSum=-1.000;SOR=0.157 GT:AD:DP:GQ:PL 0/1:59,32:92:38:38,0,533
CP000253.1 2571080 . T C 153.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.208;DP=93;Dels=0.00;ExcessHet=3.0103;FS=6.011;HaplotypeScore=15.2067;MLEAC=1;MLEAF=0.500;MQ=22.42;MQ0=56;MQRankSum=1.071;QD=1.65;ReadPosRankSum=0.046;SOR=0.136 GT:AD:DP:GQ:PL 0/1:74,19:93:99:182,0,521
CP000253.1 2571082 . T C 171.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.840;DP=90;Dels=0.00;ExcessHet=3.0103;FS=3.581;HaplotypeScore=13.2675;MLEAC=1;MLEAF=0.500;MQ=22.40;MQ0=54;MQRankSum=1.412;QD=1.97;ReadPosRankSum=0.913;SOR=0.190 GT:AD:DP:GQ:PL 0/1:48,39:90:99:200,0,366
CP000253.1 2571086 . C T 170.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.305;DP=90;Dels=0.00;ExcessHet=3.0103;FS=3.536;HaplotypeScore=12.4514;MLEAC=1;MLEAF=0.500;MQ=22.40;MQ0=54;MQRankSum=1.027;QD=1.90;ReadPosRankSum=0.316;SOR=0.195 GT:AD:DP:GQ:PL 0/1:68,22:90:99:199,0,313
CP000253.1 2571092 . T A 210.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.709;DP=85;Dels=0.00;ExcessHet=3.0103;FS=5.780;HaplotypeScore=9.7481;MLEAC=1;MLEAF=0.500;MQ=23.21;MQ0=49;MQRankSum=2.198;QD=2.48;ReadPosRankSum=-0.570;SOR=0.132 GT:AD:DP:GQ:PL 0/1:63,22:85:99:239,0,387
CP000253.1 2571134 . T C 482.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.046;DP=101;Dels=0.00;ExcessHet=3.0103;FS=3.114;HaplotypeScore=4.5356;MLEAC=1;MLEAF=0.500;MQ=23.50;MQ0=55;MQRankSum=1.115;QD=4.78;ReadPosRankSum=-1.192;SOR=0.323 GT:AD:DP:GQ:PL 0/1:36,65:101:99:511,0,257
CP000253.1 2571194 . C T 522.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.112;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=1;MLEAF=0.500;MQ=22.54;MQ0=60;MQRankSum=1.045;QD=5.03;ReadPosRankSum=1.924;SOR=0.723 GT:AD:DP:GQ:PL 0/1:37,67:105:99:551,0,162
CP000253.1 2571245 . C T 524.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.898;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7067;MLEAC=1;MLEAF=0.500;MQ=20.36;MQ0=81;MQRankSum=1.523;QD=4.13;ReadPosRankSum=2.729;SOR=0.607 GT:AD:DP:GQ:PL 0/1:56,71:129:99:553,0,187
CP000253.1 2571283 . C T 10.20 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.185;DP=122;Dels=0.00;ExcessHet=3.0103;FS=6.410;HaplotypeScore=4.5790;MLEAC=1;MLEAF=0.500;MQ=20.68;MQ0=74;MQRankSum=-0.258;QD=0.08;ReadPosRankSum=-1.599;SOR=2.813 GT:AD:DP:GQ:PL 0/1:116,5:122:38:38,0,718
CP000253.1 2571344 . G A 86.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.075;DP=100;Dels=0.00;ExcessHet=3.0103;FS=20.840;HaplotypeScore=2.2243;MLEAC=1;MLEAF=0.500;MQ=11.64;MQ0=72;MQRankSum=-0.344;QD=0.89;ReadPosRankSum=-3.056;SOR=1.833 GT:AD:DP:GQ:PL 0/1:58,39:100:99:115,0,226
CP000253.1 2571667 . T C 20.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.568;DP=183;Dels=0.00;ExcessHet=3.0103;FS=5.656;HaplotypeScore=40.2690;MLEAC=1;MLEAF=0.500;MQ=35.68;MQ0=25;MQRankSum=-3.582;QD=0.11;ReadPosRankSum=0.055;SOR=1.282 GT:AD:DP:GQ:PL 0/1:144,38:183:49:49,0,2554
CP000253.1 2571728 . G A 450.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.781;HaplotypeScore=19.9687;MLEAC=1;MLEAF=0.500;MQ=33.24;MQ0=37;MQRankSum=-4.271;QD=3.03;ReadPosRankSum=-1.925;SOR=0.541 GT:AD:DP:GQ:PL 0/1:85,64:153:99:479,0,1410
CP000253.1 2571797 . C T 1767.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.716;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8833;MLEAC=2;MLEAF=1.00;MQ=29.85;MQ0=38;MQRankSum=1.646;QD=13.81;ReadPosRankSum=0.866;SOR=0.293 GT:AD:DP:GQ:PL 1/1:5,123:128:99:1796,129,0
CP000253.1 2571848 . T C 427.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.856;DP=96;Dels=0.01;ExcessHet=3.0103;FS=3.394;HaplotypeScore=6.4429;MLEAC=1;MLEAF=0.500;MQ=27.40;MQ0=30;MQRankSum=1.372;QD=4.50;ReadPosRankSum=-2.540;SOR=1.182 GT:AD:DP:GQ:PL 0/1:58,37:95:99:456,0,670
CP000253.1 2571850 . T C 1281.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.314;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6011;MLEAC=2;MLEAF=1.00;MQ=27.40;MQ0=30;MQRankSum=1.619;QD=13.49;ReadPosRankSum=-0.210;SOR=0.322 GT:AD:DP:GQ:PL 1/1:5,90:96:93:1310,93,0
CP000253.1 2571854 . C T 431.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.246;DP=96;Dels=0.00;ExcessHet=3.0103;FS=4.974;HaplotypeScore=6.7428;MLEAC=1;MLEAF=0.500;MQ=27.40;MQ0=30;MQRankSum=1.023;QD=4.50;ReadPosRankSum=-2.381;SOR=1.382 GT:AD:DP:GQ:PL 0/1:61,35:96:99:460,0,670
CP000253.1 2571860 . T A 391.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.045;DP=95;Dels=0.00;ExcessHet=3.0103;FS=4.103;HaplotypeScore=8.6028;MLEAC=1;MLEAF=0.500;MQ=27.23;MQ0=30;MQRankSum=1.179;QD=4.17;ReadPosRankSum=-2.074;SOR=1.519 GT:AD:DP:GQ:PL 0/1:63,31:95:99:420,0,649
CP000253.1 2571902 . T C 1113.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5154;MLEAC=2;MLEAF=1.00;MQ=27.33;MQ0=25;QD=13.58;SOR=0.960 GT:AD:DP:GQ:PL 1/1:6,76:82:84:1142,84,0
CP000253.1 2571962 . C T 624.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=24.31;MQ0=20;QD=13.58;SOR=1.981 GT:AD:DP:GQ:PL 1/1:5,41:46:57:653,57,0
CP000253.1 2571965 . C T 350.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.040;DP=44;Dels=0.00;ExcessHet=3.0103;FS=2.671;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=23.49;MQ0=20;MQRankSum=-0.150;QD=7.97;ReadPosRankSum=1.104;SOR=0.071 GT:AD:DP:GQ:PL 0/1:16,28:44:85:379,0,85
CP000253.1 2572181 . C T 11.17 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=12.73;MQ0=21;MQRankSum=0.319;QD=0.45;ReadPosRankSum=-1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:18,7:25:19:39,0,19
CP000253.1 2572234 . T C 62.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.803;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4941;MLEAC=2;MLEAF=1.00;MQ=18.64;MQ0=23;MQRankSum=0.464;QD=2.02;ReadPosRankSum=-0.272;SOR=1.329 GT:AD:DP:GQ:PL 1/1:21,10:31:6:90,6,0
CP000253.1 2572286 . T C 165.56 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=23.82;MQ0=22;MQRankSum=1.477;QD=4.87;ReadPosRankSum=0.584;SOR=0.293 GT:AD:DP:GQ:PL 0/1:18,16:34:7:193,0,7
CP000253.1 2572346 . C T 219.22 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.515;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9832;MLEAC=1;MLEAF=0.500;MQ=23.92;MQ0=21;MQRankSum=1.006;QD=6.26;ReadPosRankSum=1.740;SOR=0.283 GT:AD:DP:GQ:PL 0/1:14,21:35:4:246,0,4
CP000253.1 2572349 . C T 173.56 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.429;DP=33;Dels=0.00;ExcessHet=3.0103;FS=3.256;HaplotypeScore=3.9299;MLEAC=1;MLEAF=0.500;MQ=24.63;MQ0=19;MQRankSum=1.665;QD=5.26;ReadPosRankSum=2.287;SOR=0.105 GT:AD:DP:GQ:PL 0/1:16,17:33:7:201,0,7
CP000253.1 2572496 . G A 146.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.378;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=35.60;MQ0=2;MQRankSum=0.249;QD=6.99;ReadPosRankSum=0.867;SOR=0.527 GT:AD:DP:GQ:PL 0/1:10,11:21:99:175,0,114
CP000253.1 2572618 . T C 262.80 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=36.28;MQ0=0;QD=16.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:21:291,21,0
CP000253.1 2572670 . T C 88.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=36.36;MQ0=0;QD=17.66;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:116,9,0
CP000253.1 2572679 . T C 43.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=27.59;MQ0=0;QD=14.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:71,6,0
CP000253.1 2573203 . C T 235.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.127;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5154;MLEAC=1;MLEAF=0.500;MQ=28.30;MQ0=5;MQRankSum=0.000;QD=10.25;ReadPosRankSum=1.307;SOR=0.646 GT:AD:DP:GQ:PL 0/1:4,19:23:39:264,0,39
CP000253.1 2573213 . C T 302.78 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5741;MLEAC=2;MLEAF=1.00;MQ=28.30;MQ0=5;QD=13.16;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:27:331,27,0
CP000253.1 2573276 . C T 694.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2480;MLEAC=2;MLEAF=1.00;MQ=32.96;MQ0=7;QD=15.10;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,46:47:54:723,54,0
CP000253.1 2573333 . C T 1044.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.723;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1139;MLEAC=2;MLEAF=1.00;MQ=35.83;MQ0=6;MQRankSum=1.044;QD=15.83;ReadPosRankSum=-0.924;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,65:67:78:1073,78,0
CP000253.1 2573384 . C T 423.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.269;DP=87;Dels=0.00;ExcessHet=3.0103;FS=4.119;HaplotypeScore=7.0992;MLEAC=1;MLEAF=0.500;MQ=40.85;MQ0=6;MQRankSum=2.886;QD=4.87;ReadPosRankSum=-4.009;SOR=1.259 GT:AD:DP:GQ:PL 0/1:68,19:87:99:452,0,897
CP000253.1 2573390 . T C 467.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.311;DP=90;Dels=0.00;ExcessHet=3.0103;FS=4.930;HaplotypeScore=8.1183;MLEAC=1;MLEAF=0.500;MQ=41.63;MQ0=6;MQRankSum=3.426;QD=5.26;ReadPosRankSum=-3.851;SOR=1.195 GT:AD:DP:GQ:PL 0/1:68,21:90:99:496,0,916
CP000253.1 2573396 . A T 572.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.083;DP=91;Dels=0.00;ExcessHet=3.0103;FS=5.264;HaplotypeScore=10.6557;MLEAC=1;MLEAF=0.500;MQ=42.33;MQ0=6;MQRankSum=3.285;QD=6.36;ReadPosRankSum=-3.025;SOR=1.118 GT:AD:DP:GQ:PL 0/1:64,26:91:99:601,0,968
CP000253.1 2573435 . A G 2234.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2821;MLEAC=2;MLEAF=1.00;MQ=49.04;MQ0=3;QD=22.13;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2263,168,0
CP000253.1 2573447 . T C 2424.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2593;MLEAC=2;MLEAF=1.00;MQ=50.36;MQ0=2;QD=23.77;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2453,181,0
CP000253.1 2573449 . G A 2322.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3586;MLEAC=2;MLEAF=1.00;MQ=50.36;MQ0=2;QD=23.23;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,100:103:99:2351,175,0
CP000253.1 2573469 . A T 2768.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1574;MLEAC=2;MLEAF=1.00;MQ=51.77;MQ0=2;QD=23.46;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2797,202,0
CP000253.1 2573501 . C T 2283.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.393;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9080;MLEAC=1;MLEAF=0.500;MQ=54.07;MQ0=2;MQRankSum=8.088;QD=17.70;ReadPosRankSum=4.561;SOR=0.766 GT:AD:DP:GQ:PL 0/1:29,100:130:99:2312,0,282
CP000253.1 2574338 . T G 2008.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4380;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=1.349 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2037,147,0
CP000253.1 2574484 . T C 2816.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.689;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.28;ReadPosRankSum=-0.014;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,120:122:99:2845,199,0
CP000253.1 2574532 . C T 2987.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3016,208,0
CP000253.1 2574589 . G C 3030.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4566;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3059,214,0
CP000253.1 2574644 . C T 2553.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6993;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=1.125 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2582,181,0
CP000253.1 2574752 . C T 1536.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.79;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1565,108,0
CP000253.1 2575329 . A T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2575700 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2575717 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2575737 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2575748 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2576667 . C A 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 2576812 . C T 1414.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=1.159 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1443,102,0
CP000253.1 2576832 . G A 1510.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.677;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0934;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.98;ReadPosRankSum=1.213;SOR=0.755 GT:AD:DP:GQ:PL 1/1:1,62:63:99:1539,108,0
CP000253.1 2576893 . T C 3055.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3084,217,0
CP000253.1 2576905 . G T 3184.79 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.950;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8069;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.69;ReadPosRankSum=1.371;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,128:129:99:3213,226,0
CP000253.1 2576908 . A T 3201.82 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3230,226,0
CP000253.1 2576914 . A G 3175.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.856;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.62;ReadPosRankSum=1.680;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,128:129:99:3204,226,0
CP000253.1 2576917 . G A 3213.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3242,229,0
CP000253.1 2576920 . G T 3228.29 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4938;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3257,229,0
CP000253.1 2576977 . G A 4349.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,185:187:99:4378,307,0
CP000253.1 2576986 . A G 4489.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4518,319,0
CP000253.1 2576995 . T C 4520.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.860;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.18;ReadPosRankSum=0.806;SOR=0.337 GT:AD:DP:GQ:PL 1/1:1,186:187:99:4549,319,0
CP000253.1 2577082 . A T 4587.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.9782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,190:191:99:4616,322,0
CP000253.1 2577085 . T G 4496.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.196;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8050;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.06;ReadPosRankSum=-1.386;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,194:196:99:4525,325,0
CP000253.1 2577163 . G A 4149.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8157;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4178,295,0
CP000253.1 2577178 . G A 3984.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4013,286,0
CP000253.1 2577244 . T C 3412.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.814;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2812;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.46;ReadPosRankSum=1.545;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,128:130:99:3441,247,0
CP000253.1 2577391 . C T 3174.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8413;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3203,229,0
CP000253.1 2577418 . C T 2636.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1957;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2665,190,0
CP000253.1 2577421 . T C 2599.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.24;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2628,193,0
CP000253.1 2577424 . A G 2507.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.724;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4785;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.11;ReadPosRankSum=1.500;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,103:104:99:2536,181,0
CP000253.1 2577427 . C T 2621.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6118;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2650,190,0
CP000253.1 2577436 . C T 3028.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3057,220,0
CP000253.1 2577813 . T A 370.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8587;MLEAC=2;MLEAF=1.00;MQ=58.97;MQ0=0;QD=24.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:30:399,30,0
CP000253.1 2577833 . C T 376.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4732;MLEAC=2;MLEAF=1.00;MQ=58.97;MQ0=0;QD=25.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:30:405,30,0
CP000253.1 2577862 . T C 217.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.036;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=58.45;MQ0=0;MQRankSum=-0.126;QD=21.78;ReadPosRankSum=-0.385;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,9:10:18:246,18,0
CP000253.1 2577872 . G T 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.28;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 2577874 . A T 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.28;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 2577877 . G A 225.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.28;MQ0=0;QD=25.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:254,18,0
CP000253.1 2577890 . G T 223.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.28;MQ0=0;QD=24.87;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:252,18,0
CP000253.1 2577915 . C T 181.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.77;MQ0=0;QD=25.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:210,15,0
CP000253.1 2577916 . G A 180.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.77;MQ0=0;QD=25.84;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:209,15,0
CP000253.1 2577926 . A G 130.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.86;MQ0=0;QD=26.01;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:158,12,0
CP000253.1 2577933 . A G 134.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.86;MQ0=0;QD=26.81;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:162,12,0
CP000253.1 2577954 . G A 87.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.86;MQ0=0;QD=17.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:115,9,0
CP000253.1 2577957 . G T 208.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=53.52;MQ0=0;QD=29.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:18:237,18,0
CP000253.1 2578012 . G T 57.74 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.534;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=28.83;MQ0=2;MQRankSum=0.319;QD=5.77;ReadPosRankSum=0.319;SOR=0.595 GT:AD:DP:GQ:PL 1/1:3,7:10:6:85,6,0
CP000253.1 2578013 . C T 98.28 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=28.83;MQ0=2;QD=9.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:2,8:10:9:126,9,0
CP000253.1 2578016 . T G 138.03 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=28.64;MQ0=2;QD=10.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:2,11:13:12:166,12,0
CP000253.1 2578027 . A G 226.84 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=32.80;MQ0=2;QD=14.18;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,16:17:18:255,18,0
CP000253.1 2578074 . T C 412.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=40.08;MQ0=0;QD=18.76;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,22:22:33:441,33,0
CP000253.1 2578130 . T C 399.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=39.01;MQ0=0;QD=19.99;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:33:428,33,0
CP000253.1 2578148 . T A 301.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.792;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=39.63;MQ0=0;MQRankSum=-0.970;QD=16.77;ReadPosRankSum=-0.967;SOR=0.551 GT:AD:DP:GQ:PL 1/1:1,17:18:27:330,27,0
CP000253.1 2578161 . C T 291.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.29;MQ0=0;QD=18.24;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:27:320,27,0
CP000253.1 2578167 . C T 311.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=38.29;MQ0=0;QD=19.49;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:27:340,27,0
CP000253.1 2578171 . G A 274.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=38.29;MQ0=0;QD=17.17;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:27:303,27,0
CP000253.1 2578172 . T C 302.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=38.29;MQ0=0;QD=18.92;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:27:331,27,0
CP000253.1 2578188 . G A 249.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6236;MLEAC=2;MLEAF=1.00;MQ=38.40;MQ0=0;QD=16.65;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:17:24:278,24,0
CP000253.1 2578206 . C T 219.80 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.4105;MLEAC=2;MLEAF=1.00;MQ=26.98;MQ0=5;QD=10.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,20:20:21:248,21,0
CP000253.1 2578230 . G A 329.78 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.4105;MLEAC=2;MLEAF=1.00;MQ=27.42;MQ0=5;QD=14.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:23:27:358,27,0
CP000253.1 2578239 . T C 310.78 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3435;MLEAC=2;MLEAF=1.00;MQ=27.42;MQ0=5;QD=14.13;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,22:23:27:339,27,0
CP000253.1 2578248 . C T 296.78 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4766;MLEAC=2;MLEAF=1.00;MQ=27.42;MQ0=5;QD=13.49;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,22:22:24:325,24,0
CP000253.1 2578251 . T C 244.18 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.798;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=27.42;MQ0=5;MQRankSum=0.000;QD=10.62;ReadPosRankSum=-0.690;SOR=0.395 GT:AD:DP:GQ:PL 0/1:1,22:23:10:272,0,10
CP000253.1 2578254 . C T 230.98 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.201;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7307;MLEAC=1;MLEAF=0.500;MQ=27.42;MQ0=5;MQRankSum=0.000;QD=10.04;ReadPosRankSum=-0.690;SOR=0.395 GT:AD:DP:GQ:PL 0/1:1,22:23:13:259,0,13
CP000253.1 2578260 . T C 294.78 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7977;MLEAC=2;MLEAF=1.00;MQ=27.42;MQ0=5;QD=13.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,22:22:24:323,24,0
CP000253.1 2578311 . A T 770.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=33.89;MQ0=6;QD=17.92;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,43:44:57:799,57,0
CP000253.1 2578325 . G T 977.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0493;MLEAC=2;MLEAF=1.00;MQ=35.62;MQ0=6;QD=17.46;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,56:56:72:1006,72,0
CP000253.1 2578347 . G A 996.53 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.340;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4094;MLEAC=2;MLEAF=1.00;MQ=37.55;MQ0=6;MQRankSum=0.724;QD=15.10;ReadPosRankSum=2.253;SOR=0.586 GT:AD:DP:GQ:PL 1/1:5,61:67:3:1023,3,0
CP000253.1 2578356 . A G 1160.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.553;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3309;MLEAC=1;MLEAF=0.500;MQ=39.31;MQ0=5;MQRankSum=-0.028;QD=15.48;ReadPosRankSum=2.896;SOR=0.547 GT:AD:DP:GQ:PL 0/1:8,67:75:24:1189,0,24
CP000253.1 2578368 . G A 1185.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.516;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9958;MLEAC=1;MLEAF=0.500;MQ=39.67;MQ0=5;MQRankSum=0.045;QD=15.40;ReadPosRankSum=2.479;SOR=0.634 GT:AD:DP:GQ:PL 0/1:8,69:77:24:1214,0,24
CP000253.1 2578380 . T A 1581.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0635;MLEAC=2;MLEAF=1.00;MQ=39.93;MQ0=5;QD=19.29;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,82:83:99:1610,114,0
CP000253.1 2578392 . A G 1694.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.882;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7072;MLEAC=2;MLEAF=1.00;MQ=39.39;MQ0=7;MQRankSum=0.572;QD=19.04;ReadPosRankSum=1.608;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,88:90:99:1723,123,0
CP000253.1 2578417 . G T 2034.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6623;MLEAC=2;MLEAF=1.00;MQ=40.17;MQ0=7;QD=19.95;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2063,147,0
CP000253.1 2578419 . G A 2015.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6043;MLEAC=2;MLEAF=1.00;MQ=40.17;MQ0=7;QD=19.76;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2044,144,0
CP000253.1 2578434 . G A 2184.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3686;MLEAC=2;MLEAF=1.00;MQ=39.30;MQ0=9;QD=19.00;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2213,157,0
CP000253.1 2578440 . A T 2180.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.882;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1266;MLEAC=2;MLEAF=1.00;MQ=39.31;MQ0=9;MQRankSum=-0.585;QD=18.80;ReadPosRankSum=1.490;SOR=0.290 GT:AD:DP:GQ:PL 1/1:2,114:116:99:2209,159,0
CP000253.1 2578473 . A G 1896.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.350;DP=146;Dels=0.00;ExcessHet=3.0103;FS=7.163;HaplotypeScore=5.4728;MLEAC=1;MLEAF=0.500;MQ=39.75;MQ0=11;MQRankSum=0.889;QD=13.08;ReadPosRankSum=1.857;SOR=0.179 GT:AD:DP:GQ:PL 0/1:37,108:146:99:1925,0,575
CP000253.1 2578479 . A G 501.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.824;DP=149;Dels=0.00;ExcessHet=3.0103;FS=5.930;HaplotypeScore=9.4286;MLEAC=1;MLEAF=0.500;MQ=39.37;MQ0=11;MQRankSum=-0.950;QD=3.41;ReadPosRankSum=-1.032;SOR=1.916 GT:AD:DP:GQ:PL 0/1:111,36:149:99:530,0,1921
CP000253.1 2578482 . T A 501.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.072;DP=148;Dels=0.00;ExcessHet=3.0103;FS=9.231;HaplotypeScore=11.2442;MLEAC=1;MLEAF=0.500;MQ=39.24;MQ0=11;MQRankSum=-1.201;QD=3.39;ReadPosRankSum=-0.457;SOR=2.115 GT:AD:DP:GQ:PL 0/1:113,35:148:99:530,0,1890
CP000253.1 2578491 . C T 772.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.038;DP=159;Dels=0.00;ExcessHet=3.0103;FS=13.314;HaplotypeScore=18.2190;MLEAC=1;MLEAF=0.500;MQ=39.29;MQ0=11;MQRankSum=-1.811;QD=4.86;ReadPosRankSum=-1.580;SOR=2.317 GT:AD:DP:GQ:PL 0/1:112,47:159:99:801,0,1952
CP000253.1 2578497 . T C 3002.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7475;MLEAC=2;MLEAF=1.00;MQ=39.10;MQ0=11;QD=19.63;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3031,223,0
CP000253.1 2578505 . T C 1764.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.686;DP=154;Dels=0.00;ExcessHet=3.0103;FS=15.399;HaplotypeScore=12.1164;MLEAC=1;MLEAF=0.500;MQ=38.80;MQ0=13;MQRankSum=1.859;QD=11.46;ReadPosRankSum=3.539;SOR=0.105 GT:AD:DP:GQ:PL 0/1:53,101:154:99:1793,0,988
CP000253.1 2578506 . C T 1755.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.141;DP=154;Dels=0.00;ExcessHet=3.0103;FS=13.464;HaplotypeScore=12.1510;MLEAC=1;MLEAF=0.500;MQ=38.80;MQ0=13;MQRankSum=1.859;QD=11.48;ReadPosRankSum=3.462;SOR=0.105 GT:AD:DP:GQ:PL 0/1:53,100:154:99:1784,0,954
CP000253.1 2578512 . A G 1853.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.065;DP=161;Dels=0.00;ExcessHet=3.0103;FS=15.262;HaplotypeScore=11.5519;MLEAC=1;MLEAF=0.500;MQ=39.25;MQ0=13;MQRankSum=2.189;QD=11.66;ReadPosRankSum=2.441;SOR=0.121 GT:AD:DP:GQ:PL 0/1:55,104:161:99:1882,0,1006
CP000253.1 2578518 . T C 1884.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;DP=168;Dels=0.00;ExcessHet=3.0103;FS=22.137;HaplotypeScore=14.8727;MLEAC=1;MLEAF=0.500;MQ=39.26;MQ0=13;MQRankSum=1.950;QD=11.29;ReadPosRankSum=1.591;SOR=0.094 GT:AD:DP:GQ:PL 0/1:56,111:168:99:1913,0,992
CP000253.1 2578527 . T C 3488.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.896;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1644;MLEAC=2;MLEAF=1.00;MQ=39.42;MQ0=13;MQRankSum=-1.662;QD=20.17;ReadPosRankSum=-0.617;SOR=0.417 GT:AD:DP:GQ:PL 1/1:1,172:173:99:3517,256,0
CP000253.1 2578532 . T C 998.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.302;DP=181;Dels=0.00;ExcessHet=3.0103;FS=28.056;HaplotypeScore=19.1450;MLEAC=1;MLEAF=0.500;MQ=39.89;MQ0=13;MQRankSum=-2.813;QD=5.52;ReadPosRankSum=-0.008;SOR=2.342 GT:AD:DP:GQ:PL 0/1:124,57:181:99:1027,0,2093
CP000253.1 2578536 . A T 1307.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.062;DP=203;Dels=0.00;ExcessHet=3.0103;FS=27.270;HaplotypeScore=21.0106;MLEAC=1;MLEAF=0.500;MQ=39.82;MQ0=13;MQRankSum=-3.481;QD=6.44;ReadPosRankSum=-0.696;SOR=2.332 GT:AD:DP:GQ:PL 0/1:135,68:203:99:1336,0,2303
CP000253.1 2578566 . A G 4448.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.790;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.4455;MLEAC=2;MLEAF=1.00;MQ=41.07;MQ0=12;MQRankSum=0.494;QD=20.69;ReadPosRankSum=-1.538;SOR=0.418 GT:AD:DP:GQ:PL 1/1:1,214:219:99:4477,331,0
CP000253.1 2578590 . G A 2219.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.488;DP=225;Dels=0.00;ExcessHet=3.0103;FS=19.779;HaplotypeScore=38.2022;MLEAC=1;MLEAF=0.500;MQ=41.79;MQ0=14;MQRankSum=2.043;QD=10.23;ReadPosRankSum=0.395;SOR=0.170 GT:AD:DP:GQ:PL 0/1:84,133:225:99:2248,0,1585
CP000253.1 2578608 . C A 4672.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.115;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.1213;MLEAC=2;MLEAF=1.00;MQ=42.46;MQ0=16;MQRankSum=0.150;QD=20.14;ReadPosRankSum=-0.012;SOR=1.195 GT:AD:DP:GQ:PL 1/1:4,228:234:99:4701,326,0
CP000253.1 2578614 . A G 2314.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.455;DP=250;Dels=0.00;ExcessHet=3.0103;FS=19.884;HaplotypeScore=26.4848;MLEAC=1;MLEAF=0.500;MQ=42.77;MQ0=18;MQRankSum=1.610;QD=9.33;ReadPosRankSum=-1.332;SOR=1.633 GT:AD:DP:GQ:PL 0/1:136,112:250:99:2343,0,1999
CP000253.1 2578635 . A G 5033.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.774;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.6225;MLEAC=2;MLEAF=1.00;MQ=43.61;MQ0=19;MQRankSum=1.112;QD=20.38;ReadPosRankSum=-1.535;SOR=0.838 GT:AD:DP:GQ:PL 1/1:1,246:250:99:5062,376,0
CP000253.1 2578644 . A G 2581.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.244;DP=250;Dels=0.00;ExcessHet=3.0103;FS=9.558;HaplotypeScore=44.0389;MLEAC=1;MLEAF=0.500;MQ=45.07;MQ0=17;MQRankSum=3.415;QD=10.49;ReadPosRankSum=-3.044;SOR=1.128 GT:AD:DP:GQ:PL 0/1:113,133:250:99:2610,0,1774
CP000253.1 2578668 . G A 1222.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.595;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.909;HaplotypeScore=48.8017;MLEAC=1;MLEAF=0.500;MQ=47.35;MQ0=13;MQRankSum=-5.380;QD=4.99;ReadPosRankSum=3.721;SOR=0.566 GT:AD:DP:GQ:PL 0/1:154,91:250:99:1251,0,3215
CP000253.1 2578692 . C A 5261.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.141;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=47.6004;MLEAC=2;MLEAF=1.00;MQ=48.82;MQ0=13;MQRankSum=1.225;QD=21.65;ReadPosRankSum=-0.699;SOR=0.133 GT:AD:DP:GQ:PL 1/1:2,241:244:99:5290,380,0
CP000253.1 2578716 . T A 849.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.216;DP=250;Dels=0.00;ExcessHet=3.0103;FS=5.244;HaplotypeScore=40.0579;MLEAC=1;MLEAF=0.500;MQ=49.54;MQ0=13;MQRankSum=-6.156;QD=3.41;ReadPosRankSum=1.666;SOR=0.935 GT:AD:DP:GQ:PL 0/1:181,68:250:99:878,0,3904
CP000253.1 2578806 . T C 339.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.157;DP=241;Dels=0.00;ExcessHet=3.0103;FS=2.504;HaplotypeScore=28.1302;MLEAC=1;MLEAF=0.500;MQ=53.03;MQ0=5;MQRankSum=-5.501;QD=1.43;ReadPosRankSum=-6.262;SOR=0.992 GT:AD:DP:GQ:PL 0/1:203,35:241:99:368,0,4453
CP000253.1 2578812 . C T 5639.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.1025;MLEAC=2;MLEAF=1.00;MQ=52.87;MQ0=5;QD=24.10;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,234:234:99:5668,421,0
CP000253.1 2578869 . C T 237.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.109;DP=206;Dels=0.00;ExcessHet=3.0103;FS=6.993;HaplotypeScore=22.4442;MLEAC=1;MLEAF=0.500;MQ=54.33;MQ0=2;MQRankSum=-3.222;QD=1.16;ReadPosRankSum=-7.102;SOR=1.024 GT:AD:DP:GQ:PL 0/1:180,25:206:99:266,0,4156
CP000253.1 2578892 . T C 545.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.720;DP=197;Dels=0.00;ExcessHet=3.0103;FS=13.112;HaplotypeScore=18.9135;MLEAC=1;MLEAF=0.500;MQ=54.63;MQ0=2;MQRankSum=-1.218;QD=2.77;ReadPosRankSum=-5.401;SOR=1.303 GT:AD:DP:GQ:PL 0/1:166,31:197:99:574,0,3810
CP000253.1 2578902 . A G 5050.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.761;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4010;MLEAC=2;MLEAF=1.00;MQ=54.85;MQ0=2;MQRankSum=1.814;QD=26.03;ReadPosRankSum=-0.559;SOR=0.263 GT:AD:DP:GQ:PL 1/1:1,193:196:99:5079,376,0
CP000253.1 2578908 . A C 4714.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.844;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1379;MLEAC=2;MLEAF=1.00;MQ=54.73;MQ0=2;MQRankSum=-0.677;QD=26.34;ReadPosRankSum=0.724;SOR=0.407 GT:AD:DP:GQ:PL 1/1:1,178:179:99:4743,349,0
CP000253.1 2578911 . A T 4759.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.760;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8641;MLEAC=2;MLEAF=1.00;MQ=54.73;MQ0=2;MQRankSum=0.939;QD=26.74;ReadPosRankSum=-1.305;SOR=0.120 GT:AD:DP:GQ:PL 1/1:2,176:179:99:4788,355,0
CP000253.1 2578914 . A G 4540.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.590;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.7587;MLEAC=2;MLEAF=1.00;MQ=54.76;MQ0=2;MQRankSum=-0.677;QD=25.37;ReadPosRankSum=-1.106;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,178:180:99:4569,317,0
CP000253.1 2578938 . A C 4894.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0442;MLEAC=2;MLEAF=1.00;MQ=55.25;MQ0=2;QD=27.19;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4923,370,0
CP000253.1 2578958 . G A 4992.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.779;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1757;MLEAC=2;MLEAF=1.00;MQ=55.73;MQ0=2;MQRankSum=-0.615;QD=26.99;ReadPosRankSum=0.720;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,184:187:99:5021,379,0
CP000253.1 2578971 . A T 4462.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3863;MLEAC=2;MLEAF=1.00;MQ=56.20;MQ0=0;QD=28.79;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,155:155:99:4491,331,0
CP000253.1 2578974 . A T 4388.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3863;MLEAC=2;MLEAF=1.00;MQ=56.30;MQ0=0;QD=28.87;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4417,325,0
CP000253.1 2578977 . C T 4164.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=56.35;MQ0=0;QD=28.33;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4193,307,0
CP000253.1 2578980 . A G 4171.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=56.45;MQ0=0;QD=27.81;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,150:151:99:4200,313,0
CP000253.1 2578992 . G A 936.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.711;DP=192;Dels=0.00;ExcessHet=3.0103;FS=32.014;HaplotypeScore=23.0408;MLEAC=1;MLEAF=0.500;MQ=57.36;MQ0=0;MQRankSum=-8.348;QD=4.98;ReadPosRankSum=-3.014;SOR=2.010 GT:AD:DP:GQ:PL 0/1:143,45:192:99:965,0,3535
CP000253.1 2579001 . T C 5243.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.343;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.2094;MLEAC=2;MLEAF=1.00;MQ=58.12;MQ0=0;MQRankSum=1.964;QD=27.17;ReadPosRankSum=0.215;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,192:196:99:5272,353,0
CP000253.1 2579025 . A G 5746.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6364;MLEAC=2;MLEAF=1.00;MQ=58.75;MQ0=0;QD=26.85;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,214:215:99:5775,412,0
CP000253.1 2579049 . C A 5646.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.240;DP=242;Dels=0.00;ExcessHet=3.0103;FS=3.640;HaplotypeScore=26.0493;MLEAC=2;MLEAF=1.00;MQ=59.11;MQ0=0;MQRankSum=7.570;QD=23.43;ReadPosRankSum=2.628;SOR=0.183 GT:AD:DP:GQ:PL 1/1:8,233:242:99:5675,269,0
CP000253.1 2579061 . G A 5805.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.634;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8177;MLEAC=2;MLEAF=1.00;MQ=59.18;MQ0=0;MQRankSum=8.586;QD=23.41;ReadPosRankSum=3.610;SOR=0.457 GT:AD:DP:GQ:PL 1/1:5,243:250:99:5834,291,0
CP000253.1 2579064 . T C 6076.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.809;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0925;MLEAC=2;MLEAF=1.00;MQ=59.40;MQ0=0;MQRankSum=-0.197;QD=24.80;ReadPosRankSum=0.608;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,244:246:99:6105,436,0
CP000253.1 2579094 . G A 6059.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.549;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2015;MLEAC=2;MLEAF=1.00;MQ=59.48;MQ0=0;MQRankSum=3.645;QD=24.53;ReadPosRankSum=1.585;SOR=0.917 GT:AD:DP:GQ:PL 1/1:2,245:249:99:6088,436,0
CP000253.1 2579095 . G A 6026.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2015;MLEAC=2;MLEAF=1.00;MQ=59.48;MQ0=0;QD=24.90;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,242:249:99:6055,436,0
CP000253.1 2579163 . A G 6600.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6111;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=27.50;SOR=1.081 GT:AD:DP:GQ:PL 1/1:0,240:243:99:6629,479,0
CP000253.1 2579208 . C T 6176.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3252;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=27.33;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,226:228:99:6205,448,0
CP000253.1 2579262 . C A 85.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.35;MQ0=0;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0
CP000253.1 2579266 . A G 75.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.35;MQ0=0;QD=25.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:103,9,0
CP000253.1 2579277 . G A 989.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.82;MQ0=0;QD=27.49;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:75:1018,75,0
CP000253.1 2579280 . G A 986.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.82;MQ0=0;QD=27.41;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:75:1015,75,0
CP000253.1 2579288 . G T 1018.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.83;MQ0=0;QD=26.81;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:78:1047,78,0
CP000253.1 2579292 . G A 1038.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=55.18;MQ0=0;QD=26.64;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,39:39:81:1067,81,0
CP000253.1 2579313 . G A 1043.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9973;MLEAC=2;MLEAF=1.00;MQ=54.92;MQ0=0;QD=26.09;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:81:1072,81,0
CP000253.1 2579316 . A G 1059.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9973;MLEAC=2;MLEAF=1.00;MQ=54.92;MQ0=0;QD=26.49;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:81:1088,81,0
CP000253.1 2579319 . T G 1005.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.782;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=54.92;MQ0=0;MQRankSum=-0.810;QD=25.14;ReadPosRankSum=0.784;SOR=0.342 GT:AD:DP:GQ:PL 1/1:1,39:40:78:1034,78,0
CP000253.1 2579523 . G A 4981.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9724;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=24.30;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,205:206:99:5010,349,0
CP000253.1 2579527 . A G 5004.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.008;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8665;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;MQRankSum=-0.176;QD=24.29;ReadPosRankSum=-0.176;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,205:206:99:5033,349,0
CP000253.1 2579528 . C T 5015.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9998;MLEAC=2;MLEAF=1.00;MQ=59.58;MQ0=0;QD=24.35;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,206:206:99:5044,349,0
CP000253.1 2579547 . T A 5391.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=59.82;MQ0=0;QD=24.29;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,222:222:99:5420,376,0
CP000253.1 2579550 . G A 5433.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=24.59;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,221:221:99:5462,379,0
CP000253.1 2579562 . A T 5585.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2056;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=24.61;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,227:227:99:5614,388,0
CP000253.1 2579565 . G A 5609.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5507;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=24.28;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,231:231:99:5638,394,0
CP000253.1 2579589 . C T 5212.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=24.02;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,217:217:99:5241,364,0
CP000253.1 2579592 . A G 5129.77 . AC=2;AF=1.00;AN=2;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2477;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=23.97;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,214:214:99:5158,358,0
CP000253.1 2579608 . A G 3802.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,158:158:99:3831,268,0
CP000253.1 2579610 . C A 3833.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.088;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=-0.708;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,156:157:99:3862,268,0
CP000253.1 2579612 . C T 3839.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3868,268,0
CP000253.1 2579614 . G T 3819.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.173;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4814;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.33;ReadPosRankSum=-0.708;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,156:157:99:3848,268,0
CP000253.1 2579621 . T A 3836.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3865,268,0
CP000253.1 2579625 . T A 3779.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,153:155:99:3808,265,0
CP000253.1 2579626 . T G 3804.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3833,268,0
CP000253.1 2579627 . T A 3809.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.964;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=-0.712;SOR=0.326 GT:AD:DP:GQ:PL 1/1:1,155:156:99:3838,268,0
CP000253.1 2579628 . A T 3802.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.058;DP=156;Dels=0.00;ExcessHet=3.0103;FS=3.123;HaplotypeScore=7.4474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.38;ReadPosRankSum=-0.730;SOR=0.326 GT:AD:DP:GQ:PL 1/1:1,155:156:99:3831,267,0
CP000253.1 2579649 . C G 5714.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=23.23;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,246:246:99:5743,394,0
CP000253.1 2579655 . G A 5777.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.58;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,245:245:99:5806,397,0
CP000253.1 2579656 . C G 5749.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.47;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,245:245:99:5778,397,0
CP000253.1 2579676 . T C 5356.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6557;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=0.000;QD=23.49;ReadPosRankSum=0.265;SOR=0.468 GT:AD:DP:GQ:PL 1/1:1,227:228:99:5385,370,0
CP000253.1 2579681 . T C 5308.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6557;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.81;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,223:223:99:5337,367,0
CP000253.1 2579682 . G A 5308.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6557;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.91;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,222:223:99:5337,367,0
CP000253.1 2579685 . C T 5293.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5498;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=23.74;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,223:223:99:5322,367,0
CP000253.1 2579694 . A G 5254.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5552;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=23.67;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,222:222:99:5283,364,0
CP000253.1 2579703 . C A 5047.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4154;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=23.70;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,213:213:99:5076,349,0
CP000253.1 2579706 . A C 5026.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5213;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=23.60;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,213:213:99:5055,349,0
CP000253.1 2579710 . A T 4829.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.689;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6546;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=0.000;QD=22.78;ReadPosRankSum=-1.240;SOR=0.268 GT:AD:DP:GQ:PL 1/1:1,211:212:99:4858,299,0
CP000253.1 2579718 . T C 4996.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7798;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=23.79;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,210:210:99:5025,343,0
CP000253.1 2579730 . T A 4634.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8857;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=24.14;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,192:192:99:4663,322,0
CP000253.1 2579740 . G A 315.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:344,24,0
CP000253.1 2579978 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2579980 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2579982 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2580021 . G T 2620.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=1.072 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2649,187,0
CP000253.1 2580030 . A T 2327.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2356,166,0
CP000253.1 2580045 . G A 2430.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2459,175,0
CP000253.1 2580072 . C T 2643.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=1.408 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2672,193,0
CP000253.1 2580102 . A G 2994.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.23;SOR=1.505 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3023,217,0
CP000253.1 2580108 . C T 2996.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.54;SOR=1.458 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3025,217,0
CP000253.1 2580111 . G A 2805.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.24;SOR=1.477 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2834,205,0
CP000253.1 2580122 . C G 2319.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.13;SOR=1.734 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2348,175,0
CP000253.1 2580123 . T A 2257.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.10;SOR=1.771 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2286,169,0
CP000253.1 2580126 . G A 2230.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.74;SOR=1.771 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2259,166,0
CP000253.1 2580132 . A C 2285.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.48;SOR=1.771 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2314,169,0
CP000253.1 2580138 . T A 2267.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.24;SOR=1.771 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2296,169,0
CP000253.1 2580143 . C T 2212.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.73;SOR=1.885 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2241,166,0
CP000253.1 2580149 . T A 2087.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.00;SOR=1.885 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2116,157,0
CP000253.1 2580155 . G T 2106.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.53;SOR=1.897 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2135,157,0
CP000253.1 2580156 . T A 2111.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.61;SOR=1.897 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2140,157,0
CP000253.1 2580166 . A T 1965.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.855;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.91;ReadPosRankSum=-1.583;SOR=0.442 GT:AD:DP:GQ:PL 1/1:2,66:68:99:1994,111,0
CP000253.1 2580168 . A T 1951.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.828;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.70;ReadPosRankSum=-1.472;SOR=0.442 GT:AD:DP:GQ:PL 1/1:2,66:68:99:1980,111,0
CP000253.1 2580175 . C G 2073.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.50;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2102,156,0
CP000253.1 2580227 . T C 5894.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6462;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=1.047 GT:AD:DP:GQ:PL 1/1:0,234:234:99:5923,421,0
CP000253.1 2580235 . A G 5872.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.060 GT:AD:DP:GQ:PL 1/1:0,233:236:99:5901,418,0
CP000253.1 2580251 . C A 5774.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.588;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.06;ReadPosRankSum=0.368;SOR=0.100 GT:AD:DP:GQ:PL 1/1:3,237:240:99:5803,390,0
CP000253.1 2580269 . T C 6212.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.1932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.983 GT:AD:DP:GQ:PL 1/1:0,248:248:99:6241,442,0
CP000253.1 2580363 . C T 5956.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.062;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.79;ReadPosRankSum=0.757;SOR=0.416 GT:AD:DP:GQ:PL 1/1:3,228:231:99:5985,392,0
CP000253.1 2580369 . C T 6084.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6741;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,225:225:99:6113,436,0
CP000253.1 2580375 . A T 5118.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.699;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3672;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.39;ReadPosRankSum=-0.270;SOR=0.441 GT:AD:DP:GQ:PL 1/1:3,191:194:99:5147,349,0
CP000253.1 2580376 . A T 5158.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.1553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,192:192:99:5187,373,0
CP000253.1 2580379 . C T 5048.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.824;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.0383;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.43;ReadPosRankSum=-0.432;SOR=0.457 GT:AD:DP:GQ:PL 1/1:3,188:192:99:5077,343,0
CP000253.1 2580381 . C T 4914.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.641;DP=192;Dels=0.02;ExcessHet=3.0103;FS=1.691;HaplotypeScore=58.4415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.14;ReadPosRankSum=0.492;SOR=0.517 GT:AD:DP:GQ:PL 1/1:5,183:189:99:4943,266,0
CP000253.1 2580384 . A G 4843.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=48.4553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,184:187:99:4872,352,0
CP000253.1 2580412 . T G 5978.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.704;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8201;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.91;ReadPosRankSum=1.735;SOR=0.312 GT:AD:DP:GQ:PL 1/1:1,239:240:99:6007,427,0
CP000253.1 2580414 . C T 6003.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8201;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6032,427,0
CP000253.1 2580438 . T A 5484.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=5.022;DP=240;Dels=0.00;ExcessHet=3.0103;FS=12.488;HaplotypeScore=28.8824;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.24;ReadPosRankSum=0.104;SOR=0.807 GT:AD:DP:GQ:PL 1/1:11,225:240:99:5513,403,0
CP000253.1 2580446 . G T 5851.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.821;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.01;ReadPosRankSum=0.868;SOR=0.759 GT:AD:DP:GQ:PL 1/1:1,233:234:99:5880,415,0
CP000253.1 2580879 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2580884 . G A 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2580893 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2580894 . A C 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2580929 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2580964 . A G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2580977 . C G 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2581026 . C T 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 2581052 . C T 52.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9559;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:80,6,0
CP000253.1 2581083 . G T 55.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:83,6,0
CP000253.1 2581105 . A G 91.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:119,9,0
CP000253.1 2581124 . C A 82.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:110,9,0
CP000253.1 2581136 . A G 82.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:110,9,0
CP000253.1 2581193 . C T 165.90 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.18;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:194,15,0
CP000253.1 2581210 . C A 174.90 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.383;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=29.15;ReadPosRankSum=-0.210;SOR=0.941 GT:AD:DP:GQ:PL 1/1:1,5:6:15:203,15,0
CP000253.1 2581223 . A T 166.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:15:195,15,0
CP000253.1 2581245 . G T 193.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.31;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:222,18,0
CP000253.1 2581248 . C T 172.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.58;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:6:15:201,15,0
CP000253.1 2581251 . T A 207.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.69;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:18:236,18,0
CP000253.1 2581271 . C G 171.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:15:200,15,0
CP000253.1 2581273 . A G 199.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.55;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:18:228,18,0
CP000253.1 2581274 . A C 194.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:18:223,18,0
CP000253.1 2581276 . G T 208.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:18:237,18,0
CP000253.1 2581277 . A C 201.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:18:230,18,0
CP000253.1 2581324 . A C,T 486.77 . AC=1,1;AF=0.500,0.500;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;MQ0=0;QD=21.16;SOR=0.776 GT:AD:DP:GQ:PL 1/2:0,16,7:23:99:515,196,172,319,0,304
CP000253.1 2581337 . C T 547.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.469;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-1.605;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,23:24:42:576,42,0
CP000253.1 2581394 . G T 1091.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7396;MLEAC=2;MLEAF=1.00;MQ=59.64;MQ0=0;QD=24.81;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:45:78:1120,78,0
CP000253.1 2581420 . G A 1022.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.096;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.759;HaplotypeScore=0.8667;MLEAC=1;MLEAF=0.500;MQ=59.37;MQ0=0;MQRankSum=-1.792;QD=10.33;ReadPosRankSum=-0.401;SOR=0.836 GT:AD:DP:GQ:PL 0/1:51,48:99:99:1051,0,1073
CP000253.1 2581516 . G T 1758.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.475;DP=188;Dels=0.01;ExcessHet=3.0103;FS=0.549;HaplotypeScore=29.8003;MLEAC=1;MLEAF=0.500;MQ=56.54;MQ0=3;MQRankSum=-4.709;QD=9.41;ReadPosRankSum=0.036;SOR=0.767 GT:AD:DP:GQ:PL 0/1:96,91:187:99:1787,0,2108
CP000253.1 2581517 . G C,T 4085.77 . AC=1,1;AF=0.500,0.500;AN=2;DP=188;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.0963;MLEAC=1,1;MLEAF=0.500,0.500;MQ=56.54;MQ0=3;QD=22.09;SOR=1.075 GT:AD:DP:GQ:PL 1/2:0,96,89:187:99:4114,1927,1761,2187,0,2037
CP000253.1 2581520 . T G 1759.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.704;DP=192;Dels=0.00;ExcessHet=3.0103;FS=1.184;HaplotypeScore=24.9900;MLEAC=1;MLEAF=0.500;MQ=56.48;MQ0=3;MQRankSum=-4.741;QD=9.17;ReadPosRankSum=0.000;SOR=0.891 GT:AD:DP:GQ:PL 0/1:100,92:192:99:1788,0,2115
CP000253.1 2581578 . T C 2135.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.643;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.535;HaplotypeScore=35.1908;MLEAC=1;MLEAF=0.500;MQ=55.29;MQ0=5;MQRankSum=-7.806;QD=9.66;ReadPosRankSum=-1.816;SOR=0.542 GT:AD:DP:GQ:PL 0/1:107,114:226:99:2164,0,2533
CP000253.1 2581605 . C T 1965.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.212;DP=230;Dels=0.00;ExcessHet=3.0103;FS=5.735;HaplotypeScore=50.9592;MLEAC=1;MLEAF=0.500;MQ=54.83;MQ0=5;MQRankSum=-8.478;QD=8.55;ReadPosRankSum=-0.569;SOR=0.423 GT:AD:DP:GQ:PL 0/1:120,110:230:99:1994,0,2747
CP000253.1 2581623 . G A,T 5145.77 . AC=1,1;AF=0.500,0.500;AN=2;BaseQRankSum=2.967;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.1317;MLEAC=1,1;MLEAF=0.500,0.500;MQ=54.71;MQ0=5;MQRankSum=-1.025;QD=22.67;ReadPosRankSum=-0.109;SOR=0.867 GT:AD:DP:GQ:PL 1/2:3,110,114:227:99:5174,2980,2799,2194,0,1962
CP000253.1 2581626 . A G 2639.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.399;DP=221;Dels=0.00;ExcessHet=3.0103;FS=8.162;HaplotypeScore=28.0881;MLEAC=1;MLEAF=0.500;MQ=54.56;MQ0=5;MQRankSum=8.360;QD=12.16;ReadPosRankSum=0.837;SOR=1.188 GT:AD:DP:GQ:PL 0/1:108,109:221:99:2668,0,1952
CP000253.1 2581652 . C A 1802.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.385;DP=219;Dels=0.00;ExcessHet=3.0103;FS=7.200;HaplotypeScore=38.1520;MLEAC=1;MLEAF=0.500;MQ=54.20;MQ0=5;MQRankSum=-8.333;QD=8.35;ReadPosRankSum=0.767;SOR=0.376 GT:AD:DP:GQ:PL 0/1:112,104:219:99:1831,0,2769
CP000253.1 2581671 . C T 1462.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.811;DP=193;Dels=0.00;ExcessHet=3.0103;FS=20.862;HaplotypeScore=55.1636;MLEAC=1;MLEAF=0.500;MQ=55.35;MQ0=2;MQRankSum=-7.823;QD=7.66;ReadPosRankSum=2.298;SOR=0.170 GT:AD:DP:GQ:PL 0/1:106,85:193:99:1491,0,2464
CP000253.1 2581675 . G A 1421.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.674;DP=209;Dels=0.00;ExcessHet=3.0103;FS=12.247;HaplotypeScore=54.3220;MLEAC=1;MLEAF=0.500;MQ=55.32;MQ0=0;MQRankSum=-7.098;QD=6.80;ReadPosRankSum=4.796;SOR=0.245 GT:AD:DP:GQ:PL 0/1:132,77:209:99:1450,0,3062
CP000253.1 2581676 . T C 1444.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.882;DP=209;Dels=0.00;ExcessHet=3.0103;FS=12.574;HaplotypeScore=71.9726;MLEAC=1;MLEAF=0.500;MQ=55.32;MQ0=0;MQRankSum=-6.953;QD=6.95;ReadPosRankSum=4.738;SOR=0.267 GT:AD:DP:GQ:PL 0/1:130,78:209:99:1473,0,3137
CP000253.1 2581680 . A T 5395.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=66.8348;MLEAC=2;MLEAF=1.00;MQ=55.32;MQ0=0;QD=26.19;SOR=1.212 GT:AD:DP:GQ:PL 1/1:0,206:209:99:5424,400,0
CP000253.1 2581686 . T C 1854.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.009;DP=212;Dels=0.00;ExcessHet=3.0103;FS=15.169;HaplotypeScore=57.6333;MLEAC=1;MLEAF=0.500;MQ=54.82;MQ0=1;MQRankSum=-7.652;QD=9.00;ReadPosRankSum=0.523;SOR=0.156 GT:AD:DP:GQ:PL 0/1:107,99:212:99:1883,0,2419
CP000253.1 2581695 . C T 2064.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.544;DP=212;Dels=0.00;ExcessHet=3.0103;FS=33.529;HaplotypeScore=93.0323;MLEAC=1;MLEAF=0.500;MQ=54.78;MQ0=1;MQRankSum=-7.244;QD=9.83;ReadPosRankSum=0.460;SOR=0.287 GT:AD:DP:GQ:PL 0/1:107,103:212:99:2093,0,2237
CP000253.1 2581698 . C T 2228.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=4.502;DP=211;Dels=0.00;ExcessHet=3.0103;FS=41.942;HaplotypeScore=121.4108;MLEAC=1;MLEAF=0.500;MQ=54.75;MQ0=1;MQRankSum=-7.170;QD=10.61;ReadPosRankSum=0.364;SOR=0.259 GT:AD:DP:GQ:PL 0/1:97,113:211:99:2257,0,1813
CP000253.1 2581701 . T C 70.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.210;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=135.3408;MLEAC=1;MLEAF=0.500;MQ=54.55;MQ0=1;MQRankSum=-1.489;QD=0.32;ReadPosRankSum=-5.563;SOR=0.392 GT:AD:DP:GQ:PL 0/1:197,24:224:99:99,0,4299
CP000253.1 2581704 . T C 1377.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.380;DP=240;Dels=0.00;ExcessHet=3.0103;FS=3.129;HaplotypeScore=148.5054;MLEAC=1;MLEAF=0.500;MQ=54.56;MQ0=1;MQRankSum=-5.039;QD=5.79;ReadPosRankSum=6.438;SOR=0.495 GT:AD:DP:GQ:PL 0/1:161,77:240:99:1406,0,3412
CP000253.1 2581708 . G T 1307.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.919;DP=245;Dels=0.00;ExcessHet=3.0103;FS=1.656;HaplotypeScore=183.0043;MLEAC=1;MLEAF=0.500;MQ=54.43;MQ0=1;MQRankSum=-4.694;QD=5.34;ReadPosRankSum=6.348;SOR=0.580 GT:AD:DP:GQ:PL 0/1:165,80:245:99:1336,0,3552
CP000253.1 2581710 . C T 2191.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.278;DP=247;Dels=0.00;ExcessHet=3.0103;FS=28.914;HaplotypeScore=165.4984;MLEAC=1;MLEAF=0.500;MQ=54.35;MQ0=1;MQRankSum=-6.165;QD=9.17;ReadPosRankSum=0.123;SOR=0.625 GT:AD:DP:GQ:PL 0/1:115,124:247:99:2220,0,2114
CP000253.1 2581716 . T C 2217.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.441;DP=249;Dels=0.00;ExcessHet=3.0103;FS=2.689;HaplotypeScore=158.4642;MLEAC=1;MLEAF=0.500;MQ=54.22;MQ0=1;MQRankSum=-4.596;QD=9.24;ReadPosRankSum=1.700;SOR=0.598 GT:AD:DP:GQ:PL 0/1:119,121:249:99:2246,0,1877
CP000253.1 2581723 . G T 1274.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.642;DP=247;Dels=0.00;ExcessHet=3.0103;FS=1.188;HaplotypeScore=111.9427;MLEAC=1;MLEAF=0.500;MQ=54.15;MQ0=1;MQRankSum=-4.609;QD=5.18;ReadPosRankSum=5.772;SOR=0.685 GT:AD:DP:GQ:PL 0/1:166,80:247:99:1303,0,3352
CP000253.1 2581724 . T C 1259.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.643;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=117.4200;MLEAC=1;MLEAF=0.500;MQ=54.10;MQ0=1;MQRankSum=-4.575;QD=5.21;ReadPosRankSum=6.952;SOR=0.736 GT:AD:DP:GQ:PL 0/1:168,74:245:99:1288,0,3607
CP000253.1 2581725 . T G 1296.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.213;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=121.9478;MLEAC=1;MLEAF=0.500;MQ=54.13;MQ0=1;MQRankSum=-4.407;QD=5.27;ReadPosRankSum=6.255;SOR=0.659 GT:AD:DP:GQ:PL 0/1:172,74:246:99:1325,0,3507
CP000253.1 2581726 . T C 1303.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.124;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.501;HaplotypeScore=126.4144;MLEAC=1;MLEAF=0.500;MQ=54.13;MQ0=1;MQRankSum=-4.769;QD=5.30;ReadPosRankSum=6.498;SOR=0.734 GT:AD:DP:GQ:PL 0/1:170,76:246:99:1332,0,3426
CP000253.1 2581728 . C T 1395.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=4.802;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.510;HaplotypeScore=154.6236;MLEAC=1;MLEAF=0.500;MQ=54.13;MQ0=1;MQRankSum=-4.861;QD=5.77;ReadPosRankSum=6.436;SOR=0.736 GT:AD:DP:GQ:PL 0/1:168,74:245:99:1424,0,3088
CP000253.1 2581737 . T C 2469.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.515;DP=250;Dels=0.00;ExcessHet=3.0103;FS=20.355;HaplotypeScore=208.1619;MLEAC=1;MLEAF=0.500;MQ=51.56;MQ0=3;MQRankSum=-5.800;QD=10.16;ReadPosRankSum=-2.635;SOR=0.991 GT:AD:DP:GQ:PL 0/1:87,156:250:99:2498,0,1568
CP000253.1 2581746 . T C 404.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.561;DP=245;Dels=0.00;ExcessHet=3.0103;FS=34.317;HaplotypeScore=215.0338;MLEAC=1;MLEAF=0.500;MQ=50.77;MQ0=4;MQRankSum=5.361;QD=1.67;ReadPosRankSum=3.603;SOR=1.575 GT:AD:DP:GQ:PL 0/1:190,52:245:99:433,0,3439
CP000253.1 2581749 . T A 220.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-4.411;DP=243;Dels=0.00;ExcessHet=3.0103;FS=11.503;HaplotypeScore=217.1550;MLEAC=1;MLEAF=0.500;MQ=50.69;MQ0=4;MQRankSum=4.384;QD=0.92;ReadPosRankSum=1.367;SOR=1.170 GT:AD:DP:GQ:PL 0/1:201,39:243:99:249,0,3823
CP000253.1 2581752 . T C 2693.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-4.025;DP=243;Dels=0.00;ExcessHet=3.0103;FS=5.344;HaplotypeScore=219.8533;MLEAC=1;MLEAF=0.500;MQ=50.69;MQ0=4;MQRankSum=7.143;QD=11.22;ReadPosRankSum=1.308;SOR=0.443 GT:AD:DP:GQ:PL 0/1:106,134:243:99:2722,0,1493
CP000253.1 2581758 . C T 2272.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.904;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=162.3999;MLEAC=1;MLEAF=0.500;MQ=50.86;MQ0=4;MQRankSum=-3.459;QD=9.75;ReadPosRankSum=-0.093;SOR=0.339 GT:AD:DP:GQ:PL 0/1:87,146:243:99:2301,0,1180
CP000253.1 2581759 . G A 868.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.698;DP=243;Dels=0.00;ExcessHet=3.0103;FS=12.315;HaplotypeScore=164.0568;MLEAC=1;MLEAF=0.500;MQ=50.86;MQ0=4;MQRankSum=2.458;QD=3.64;ReadPosRankSum=-1.313;SOR=1.923 GT:AD:DP:GQ:PL 0/1:179,60:243:99:897,0,3016
CP000253.1 2581779 . T C 1521.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.143;DP=232;Dels=0.00;ExcessHet=3.0103;FS=38.964;HaplotypeScore=62.1170;MLEAC=1;MLEAF=0.500;MQ=50.90;MQ0=4;MQRankSum=2.199;QD=6.62;ReadPosRankSum=2.438;SOR=2.354 GT:AD:DP:GQ:PL 0/1:141,89:232:99:1550,0,2195
CP000253.1 2581785 . T C 1780.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.936;DP=229;Dels=0.00;ExcessHet=3.0103;FS=29.726;HaplotypeScore=56.1381;MLEAC=1;MLEAF=0.500;MQ=50.89;MQ0=4;MQRankSum=-2.678;QD=7.88;ReadPosRankSum=-2.985;SOR=0.260 GT:AD:DP:GQ:PL 0/1:97,129:229:99:1809,0,2089
CP000253.1 2581794 . C T 1384.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.488;DP=208;Dels=0.02;ExcessHet=3.0103;FS=26.547;HaplotypeScore=106.3790;MLEAC=1;MLEAF=0.500;MQ=50.51;MQ0=4;MQRankSum=-2.745;QD=6.82;ReadPosRankSum=-4.481;SOR=0.279 GT:AD:DP:GQ:PL 0/1:99,104:204:99:1413,0,2124
CP000253.1 2581797 . T C 1023.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.302;DP=205;Dels=0.00;ExcessHet=3.0103;FS=1.868;HaplotypeScore=116.5552;MLEAC=1;MLEAF=0.500;MQ=50.46;MQ0=4;MQRankSum=-5.071;QD=4.99;ReadPosRankSum=-3.780;SOR=0.856 GT:AD:DP:GQ:PL 0/1:136,69:205:99:1052,0,2941
CP000253.1 2581800 . C T 976.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.366;DP=204;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=115.9440;MLEAC=1;MLEAF=0.500;MQ=50.41;MQ0=4;MQRankSum=-5.508;QD=4.88;ReadPosRankSum=-3.870;SOR=0.796 GT:AD:DP:GQ:PL 0/1:131,69:202:99:1005,0,2936
CP000253.1 2581806 . T C 2958.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.490;DP=190;Dels=0.04;ExcessHet=3.0103;FS=54.814;HaplotypeScore=72.0116;MLEAC=1;MLEAF=0.500;MQ=49.87;MQ0=4;MQRankSum=-2.718;QD=16.17;ReadPosRankSum=1.494;SOR=1.710 GT:AD:DP:GQ:PL 0/1:38,145:183:99:2987,0,298
CP000253.1 2581860 . G A 863.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.028;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.808;HaplotypeScore=15.0572;MLEAC=1;MLEAF=0.500;MQ=48.71;MQ0=5;MQRankSum=-6.100;QD=5.30;ReadPosRankSum=-1.346;SOR=0.398 GT:AD:DP:GQ:PL 0/1:94,69:163:99:892,0,2449
CP000253.1 2581863 . G A 764.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.414;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.830;HaplotypeScore=16.0368;MLEAC=1;MLEAF=0.500;MQ=48.47;MQ0=5;MQRankSum=-6.493;QD=4.78;ReadPosRankSum=-0.710;SOR=0.390 GT:AD:DP:GQ:PL 0/1:94,66:160:99:793,0,2512
CP000253.1 2581893 . G A 655.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.575;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4138;MLEAC=1;MLEAF=0.500;MQ=47.97;MQ0=6;MQRankSum=-6.743;QD=4.40;ReadPosRankSum=0.396;SOR=0.466 GT:AD:DP:GQ:PL 0/1:91,58:151:99:684,0,2421
CP000253.1 2581902 . A G 563.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.581;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.706;HaplotypeScore=11.5506;MLEAC=1;MLEAF=0.500;MQ=47.99;MQ0=7;MQRankSum=-7.206;QD=3.92;ReadPosRankSum=1.488;SOR=0.605 GT:AD:DP:GQ:PL 0/1:92,52:144:99:592,0,2419
CP000253.1 2581914 . G A 391.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.275;DP=118;Dels=0.00;ExcessHet=3.0103;FS=4.000;HaplotypeScore=17.4338;MLEAC=1;MLEAF=0.500;MQ=47.80;MQ0=5;MQRankSum=-7.192;QD=3.35;ReadPosRankSum=3.146;SOR=1.121 GT:AD:DP:GQ:PL 0/1:80,37:118:99:420,0,2040
CP000253.1 2581924 . C T 2692.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.942;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3150;MLEAC=2;MLEAF=1.00;MQ=48.14;MQ0=5;MQRankSum=-1.023;QD=24.70;ReadPosRankSum=1.066;SOR=1.136 GT:AD:DP:GQ:PL 1/1:1,108:109:99:2721,202,0
CP000253.1 2581926 . T A 2644.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.624;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2777;MLEAC=2;MLEAF=1.00;MQ=47.82;MQ0=5;MQRankSum=1.821;QD=24.49;ReadPosRankSum=-0.131;SOR=1.368 GT:AD:DP:GQ:PL 1/1:2,106:109:99:2673,202,0
CP000253.1 2581938 . A G 2637.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0324;MLEAC=2;MLEAF=1.00;MQ=46.41;MQ0=13;QD=22.35;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,118:119:99:2666,199,0
CP000253.1 2581963 . G T 2672.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8930;MLEAC=2;MLEAF=1.00;MQ=47.32;MQ0=12;QD=24.30;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2701,202,0
CP000253.1 2581965 . G A 2577.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.844;DP=110;Dels=0.00;ExcessHet=3.0103;FS=3.222;HaplotypeScore=9.6543;MLEAC=2;MLEAF=1.00;MQ=47.32;MQ0=12;MQRankSum=-1.150;QD=23.65;ReadPosRankSum=1.733;SOR=0.424 GT:AD:DP:GQ:PL 1/1:1,108:110:99:2606,196,0
CP000253.1 2581980 . G A 3160.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.758;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0965;MLEAC=2;MLEAF=1.00;MQ=46.80;MQ0=16;MQRankSum=-1.212;QD=23.41;ReadPosRankSum=-0.699;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,134:137:99:3189,241,0
CP000253.1 2581986 . A T 3405.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3958;MLEAC=2;MLEAF=1.00;MQ=46.43;MQ0=16;QD=24.15;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3434,256,0
CP000253.1 2582019 . G A 2508.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.701;DP=158;Dels=0.00;ExcessHet=3.0103;FS=4.971;HaplotypeScore=18.7073;MLEAC=1;MLEAF=0.500;MQ=46.08;MQ0=16;MQRankSum=6.771;QD=16.08;ReadPosRankSum=1.978;SOR=0.367 GT:AD:DP:GQ:PL 0/1:42,114:158:99:2537,0,560
CP000253.1 2582025 . G A 530.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.361;DP=161;Dels=0.00;ExcessHet=3.0103;FS=6.729;HaplotypeScore=17.8523;MLEAC=1;MLEAF=0.500;MQ=46.33;MQ0=16;MQRankSum=-6.248;QD=3.32;ReadPosRankSum=-0.959;SOR=1.382 GT:AD:DP:GQ:PL 0/1:121,39:161:99:559,0,2522
CP000253.1 2582028 . A T 547.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.104;DP=157;Dels=0.00;ExcessHet=3.0103;FS=6.672;HaplotypeScore=19.3174;MLEAC=1;MLEAF=0.500;MQ=46.39;MQ0=16;MQRankSum=-5.950;QD=3.51;ReadPosRankSum=-1.235;SOR=1.371 GT:AD:DP:GQ:PL 0/1:116,40:157:99:576,0,2422
CP000253.1 2582037 . C T 2511.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;DP=175;Dels=0.00;ExcessHet=3.0103;FS=9.700;HaplotypeScore=18.6691;MLEAC=1;MLEAF=0.500;MQ=45.51;MQ0=19;MQRankSum=5.648;QD=14.52;ReadPosRankSum=1.740;SOR=0.250 GT:AD:DP:GQ:PL 0/1:48,125:175:99:2540,0,735
CP000253.1 2582043 . T C 3885.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.788;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9070;MLEAC=2;MLEAF=1.00;MQ=45.13;MQ0=19;MQRankSum=-0.981;QD=22.20;ReadPosRankSum=1.689;SOR=0.327 GT:AD:DP:GQ:PL 1/1:1,174:175:99:3914,292,0
CP000253.1 2582051 . T C 858.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.483;DP=181;Dels=0.00;ExcessHet=3.0103;FS=10.614;HaplotypeScore=12.5183;MLEAC=1;MLEAF=0.500;MQ=44.24;MQ0=21;MQRankSum=-5.338;QD=4.74;ReadPosRankSum=-2.083;SOR=1.638 GT:AD:DP:GQ:PL 0/1:128,53:181:99:887,0,2532
CP000253.1 2582052 . T C 2544.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.679;DP=181;Dels=0.00;ExcessHet=3.0103;FS=13.027;HaplotypeScore=14.1736;MLEAC=1;MLEAF=0.500;MQ=44.11;MQ0=21;MQRankSum=5.256;QD=14.06;ReadPosRankSum=2.087;SOR=0.216 GT:AD:DP:GQ:PL 0/1:53,128:181:99:2573,0,897
CP000253.1 2582058 . A G 876.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.968;DP=182;Dels=0.00;ExcessHet=3.0103;FS=11.509;HaplotypeScore=14.9884;MLEAC=1;MLEAF=0.500;MQ=43.38;MQ0=22;MQRankSum=-4.823;QD=4.84;ReadPosRankSum=-1.901;SOR=1.609 GT:AD:DP:GQ:PL 0/1:127,54:182:99:905,0,2457
CP000253.1 2582064 . C T 2482.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.394;DP=180;Dels=0.00;ExcessHet=3.0103;FS=10.701;HaplotypeScore=15.7314;MLEAC=1;MLEAF=0.500;MQ=43.20;MQ0=20;MQRankSum=4.956;QD=13.95;ReadPosRankSum=2.206;SOR=0.232 GT:AD:DP:GQ:PL 0/1:56,122:180:99:2511,0,861
CP000253.1 2582076 . A G 3689.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7519;MLEAC=2;MLEAF=1.00;MQ=42.88;MQ0=21;QD=20.05;SOR=0.951 GT:AD:DP:GQ:PL 1/1:0,184:186:99:3718,277,0
CP000253.1 2582078 . T C 2362.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.017;DP=186;Dels=0.00;ExcessHet=3.0103;FS=10.948;HaplotypeScore=22.6460;MLEAC=1;MLEAF=0.500;MQ=42.88;MQ0=21;MQRankSum=4.515;QD=12.70;ReadPosRankSum=0.743;SOR=0.244 GT:AD:DP:GQ:PL 0/1:57,129:186:99:2391,0,839
CP000253.1 2582082 . T A 843.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.200;DP=191;Dels=0.00;ExcessHet=3.0103;FS=10.324;HaplotypeScore=27.1235;MLEAC=1;MLEAF=0.500;MQ=42.97;MQ0=21;MQRankSum=-4.761;QD=4.42;ReadPosRankSum=-0.366;SOR=1.485 GT:AD:DP:GQ:PL 0/1:135,56:191:99:872,0,2578
CP000253.1 2582112 . A G 4157.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.1469;MLEAC=2;MLEAF=1.00;MQ=42.06;MQ0=23;MQRankSum=0.620;QD=21.11;ReadPosRankSum=1.523;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,196:197:99:4186,304,0
CP000253.1 2582115 . A G 4026.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.7511;MLEAC=2;MLEAF=1.00;MQ=42.06;MQ0=23;QD=20.65;SOR=0.979 GT:AD:DP:GQ:PL 1/1:0,195:197:99:4055,298,0
CP000253.1 2582136 . G A 1730.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.189;DP=231;Dels=0.00;ExcessHet=3.0103;FS=28.637;HaplotypeScore=23.4614;MLEAC=1;MLEAF=0.500;MQ=43.38;MQ0=25;MQRankSum=-3.917;QD=7.53;ReadPosRankSum=-2.513;SOR=1.953 GT:AD:DP:GQ:PL 0/1:136,94:231:99:1759,0,2427
CP000253.1 2582160 . G A 1993.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.781;DP=248;Dels=0.00;ExcessHet=3.0103;FS=18.813;HaplotypeScore=31.1118;MLEAC=1;MLEAF=0.500;MQ=43.41;MQ0=28;MQRankSum=-4.082;QD=8.14;ReadPosRankSum=-3.141;SOR=1.579 GT:AD:DP:GQ:PL 0/1:129,116:248:99:2022,0,2351
CP000253.1 2582190 . G A 2244.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.429;DP=246;Dels=0.00;ExcessHet=3.0103;FS=12.458;HaplotypeScore=35.5295;MLEAC=1;MLEAF=0.500;MQ=43.91;MQ0=25;MQRankSum=-2.671;QD=9.16;ReadPosRankSum=-3.042;SOR=1.341 GT:AD:DP:GQ:PL 0/1:116,129:246:99:2273,0,2147
CP000253.1 2582214 . A G 1578.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.312;DP=250;Dels=0.00;ExcessHet=3.0103;FS=20.683;HaplotypeScore=52.7974;MLEAC=1;MLEAF=0.500;MQ=44.91;MQ0=24;MQRankSum=0.202;QD=6.37;ReadPosRankSum=3.241;SOR=0.522 GT:AD:DP:GQ:PL 0/1:154,94:250:99:1607,0,3022
CP000253.1 2582262 . T A 3847.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.046;DP=232;Dels=0.00;ExcessHet=3.0103;FS=14.903;HaplotypeScore=32.9002;MLEAC=1;MLEAF=0.500;MQ=47.23;MQ0=18;MQRankSum=4.232;QD=16.59;ReadPosRankSum=2.518;SOR=0.988 GT:AD:DP:GQ:PL 0/1:55,177:232:99:3876,0,805
CP000253.1 2582272 . T C 5556.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.857;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.9885;MLEAC=2;MLEAF=1.00;MQ=47.70;MQ0=18;MQRankSum=1.444;QD=23.25;ReadPosRankSum=1.396;SOR=0.522 GT:AD:DP:GQ:PL 1/1:1,238:241:99:5585,412,0
CP000253.1 2582280 . C A 6009.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.673;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.7180;MLEAC=2;MLEAF=1.00;MQ=49.25;MQ0=12;MQRankSum=0.325;QD=24.53;ReadPosRankSum=0.148;SOR=0.158 GT:AD:DP:GQ:PL 1/1:2,243:245:99:6038,445,0
CP000253.1 2582333 . T C 6477.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.603;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.791;HaplotypeScore=24.2071;MLEAC=2;MLEAF=1.00;MQ=52.34;MQ0=2;MQRankSum=0.357;QD=26.02;ReadPosRankSum=2.292;SOR=0.632 GT:AD:DP:GQ:PL 1/1:2,247:250:99:6506,459,0
CP000253.1 2582348 . C T 6586.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7706;MLEAC=2;MLEAF=1.00;MQ=53.01;MQ0=2;QD=26.67;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,247:248:99:6615,485,0
CP000253.1 2582352 . T C 4955.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.824;DP=249;Dels=0.00;ExcessHet=3.0103;FS=7.560;HaplotypeScore=23.3127;MLEAC=1;MLEAF=0.500;MQ=53.26;MQ0=4;MQRankSum=5.906;QD=19.90;ReadPosRankSum=5.884;SOR=0.329 GT:AD:DP:GQ:PL 0/1:46,203:249:99:4984,0,667
CP000253.1 2582370 . C T 6830.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.513;DP=249;Dels=0.00;ExcessHet=3.0103;FS=3.361;HaplotypeScore=23.9506;MLEAC=2;MLEAF=1.00;MQ=53.94;MQ0=4;MQRankSum=-0.746;QD=27.43;ReadPosRankSum=-1.209;SOR=0.492 GT:AD:DP:GQ:PL 1/1:1,248:249:99:6859,472,0
CP000253.1 2582381 . A G 1129.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.546;DP=249;Dels=0.00;ExcessHet=3.0103;FS=22.140;HaplotypeScore=38.5718;MLEAC=1;MLEAF=0.500;MQ=54.26;MQ0=3;MQRankSum=-4.279;QD=4.61;ReadPosRankSum=-4.416;SOR=1.653 GT:AD:DP:GQ:PL 0/1:185,60:249:99:1158,0,4521
CP000253.1 2582388 . C T 1311.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.958;DP=249;Dels=0.00;ExcessHet=3.0103;FS=14.382;HaplotypeScore=42.7478;MLEAC=1;MLEAF=0.500;MQ=54.38;MQ0=3;MQRankSum=-3.473;QD=5.29;ReadPosRankSum=-3.664;SOR=1.446 GT:AD:DP:GQ:PL 0/1:178,70:249:99:1340,0,4407
CP000253.1 2582393 . A G 1394.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.368;DP=248;Dels=0.00;ExcessHet=3.0103;FS=18.237;HaplotypeScore=37.5051;MLEAC=1;MLEAF=0.500;MQ=54.68;MQ0=2;MQRankSum=-2.988;QD=5.76;ReadPosRankSum=-3.889;SOR=1.309 GT:AD:DP:GQ:PL 0/1:171,71:248:99:1423,0,4102
CP000253.1 2582415 . T C 2017.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.667;DP=249;Dels=0.00;ExcessHet=3.0103;FS=20.503;HaplotypeScore=26.0215;MLEAC=1;MLEAF=0.500;MQ=56.06;MQ0=2;MQRankSum=-1.756;QD=8.20;ReadPosRankSum=-5.162;SOR=0.933 GT:AD:DP:GQ:PL 0/1:149,97:249:99:2046,0,3883
CP000253.1 2582438 . C T 2339.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.713;DP=249;Dels=0.00;ExcessHet=3.0103;FS=18.313;HaplotypeScore=37.0836;MLEAC=1;MLEAF=0.500;MQ=56.66;MQ0=2;MQRankSum=-1.373;QD=9.40;ReadPosRankSum=-4.621;SOR=0.646 GT:AD:DP:GQ:PL 0/1:138,111:249:99:2368,0,3614
CP000253.1 2582448 . A G 6631.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.873;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.3573;MLEAC=2;MLEAF=1.00;MQ=56.86;MQ0=2;MQRankSum=2.450;QD=26.63;ReadPosRankSum=0.187;SOR=0.480 GT:AD:DP:GQ:PL 1/1:3,246:249:99:6660,497,0
CP000253.1 2582517 . A T 6790.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1638;MLEAC=2;MLEAF=1.00;MQ=58.23;MQ0=0;MQRankSum=-0.318;QD=28.18;ReadPosRankSum=1.258;SOR=0.365 GT:AD:DP:GQ:PL 1/1:1,240:242:99:6819,500,0
CP000253.1 2582520 . A T 6783.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1571;MLEAC=2;MLEAF=1.00;MQ=58.29;MQ0=0;QD=28.27;SOR=1.037 GT:AD:DP:GQ:PL 1/1:0,240:241:99:6812,500,0
CP000253.1 2582523 . C T 6815.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1571;MLEAC=2;MLEAF=1.00;MQ=58.29;MQ0=0;MQRankSum=-0.304;QD=28.64;ReadPosRankSum=1.005;SOR=0.362 GT:AD:DP:GQ:PL 1/1:1,237:241:99:6844,500,0
CP000253.1 2582526 . A G 6552.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4344;MLEAC=2;MLEAF=1.00;MQ=58.30;MQ0=0;QD=27.30;SOR=1.059 GT:AD:DP:GQ:PL 1/1:0,240:242:99:6581,485,0
CP000253.1 2582538 . G A 4489.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.489;DP=250;Dels=0.00;ExcessHet=3.0103;FS=10.358;HaplotypeScore=19.9366;MLEAC=1;MLEAF=0.500;MQ=58.51;MQ0=0;MQRankSum=1.239;QD=18.10;ReadPosRankSum=1.426;SOR=0.289 GT:AD:DP:GQ:PL 0/1:57,191:250:99:4518,0,1310
CP000253.1 2582547 . T C 6635.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.767;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9526;MLEAC=2;MLEAF=1.00;MQ=58.61;MQ0=0;MQRankSum=-0.277;QD=27.53;ReadPosRankSum=-1.524;SOR=0.611 GT:AD:DP:GQ:PL 1/1:1,240:244:99:6664,485,0
CP000253.1 2582595 . A C 4740.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.221;DP=245;Dels=0.00;ExcessHet=3.0103;FS=4.205;HaplotypeScore=25.7143;MLEAC=1;MLEAF=0.500;MQ=58.94;MQ0=0;MQRankSum=4.274;QD=19.43;ReadPosRankSum=7.141;SOR=0.419 GT:AD:DP:GQ:PL 0/1:39,205:245:99:4769,0,766
CP000253.1 2582658 . T C 4960.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.730;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2472;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=0.152;SOR=0.840 GT:AD:DP:GQ:PL 1/1:1,193:197:99:4989,358,0
CP000253.1 2582664 . G A 5086.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.6117;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;QD=25.69;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,198:200:99:5115,364,0
CP000253.1 2582730 . G A 4735.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5020;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;QD=26.91;SOR=1.218 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4764,337,0
CP000253.1 2582733 . T C 4460.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6096;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=26.55;SOR=1.248 GT:AD:DP:GQ:PL 1/1:0,168:169:99:4489,322,0
CP000253.1 2582745 . T A 4310.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7325;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=26.45;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,163:165:99:4339,310,0
CP000253.1 2582751 . T C 3877.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.2294;MLEAC=2;MLEAF=1.00;MQ=59.83;MQ0=0;QD=27.12;SOR=1.219 GT:AD:DP:GQ:PL 1/1:0,143:146:99:3906,283,0
CP000253.1 2582752 . C T 3690.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.9334;MLEAC=2;MLEAF=1.00;MQ=59.83;MQ0=0;QD=25.45;SOR=1.251 GT:AD:DP:GQ:PL 1/1:0,145:146:99:3719,268,0
CP000253.1 2582883 . T A 1285.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.00;MQ0=0;QD=25.72;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1314,99,0
CP000253.1 2582885 . T C 1288.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.00;MQ0=0;QD=25.78;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1317,99,0
CP000253.1 2582891 . T C 1272.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=45.00;MQ0=0;QD=25.46;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1301,99,0
CP000253.1 2582901 . C T 1210.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.43;MQ0=0;QD=25.22;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:93:1239,93,0
CP000253.1 2582902 . G T 1242.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.43;MQ0=0;QD=25.89;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:96:1271,96,0
CP000253.1 2582904 . A T 1236.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.43;MQ0=0;QD=25.77;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:96:1265,96,0
CP000253.1 2582913 . C A 1255.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.43;MQ0=0;QD=26.16;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:96:1284,96,0
CP000253.1 2582914 . T C 1239.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.43;MQ0=0;QD=25.83;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:96:1268,96,0
CP000253.1 2582919 . T G 1155.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.43;MQ0=0;QD=24.08;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:90:1184,90,0
CP000253.1 2582924 . T C 1229.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.43;MQ0=0;QD=25.62;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:96:1258,96,0
CP000253.1 2582925 . C A 1240.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=44.43;MQ0=0;QD=25.85;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:96:1269,96,0
CP000253.1 2582934 . A G 1836.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=50.50;MQ0=0;QD=24.49;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1865,138,0
CP000253.1 2582937 . G A 1913.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=50.77;MQ0=0;QD=24.85;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1942,141,0
CP000253.1 2583621 . C A 578.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.05;MQ0=0;QD=25.16;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:607,45,0
CP000253.1 2583630 . G A 590.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.05;MQ0=0;QD=25.69;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:619,45,0
CP000253.1 2583636 . A G 573.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=52.05;MQ0=0;QD=24.95;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:602,45,0
CP000253.1 2583648 . T C 592.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=52.05;MQ0=0;QD=25.77;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:621,45,0
CP000253.1 2583657 . T C 574.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.05;MQ0=0;QD=24.99;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:603,45,0
CP000253.1 2583666 . A T 595.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.05;MQ0=0;QD=25.90;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:624,45,0
CP000253.1 2583672 . T A 591.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=52.05;MQ0=0;QD=25.73;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:620,45,0
CP000253.1 2583675 . G C 532.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=52.05;MQ0=0;QD=23.16;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:42:561,42,0
CP000253.1 2583680 . G A 584.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=52.05;MQ0=0;QD=25.42;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:613,45,0
CP000253.1 2583681 . C A 592.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.05;MQ0=0;QD=25.77;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:45:621,45,0
CP000253.1 2583702 . A T 567.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.50;MQ0=0;QD=27.04;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:45:596,45,0
CP000253.1 2583708 . G A 571.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.50;MQ0=0;QD=27.23;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:45:600,45,0
CP000253.1 2583826 . A C 1773.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.91;MQ0=0;QD=28.61;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1802,129,0
CP000253.1 2583849 . T A 1714.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5592;MLEAC=2;MLEAF=1.00;MQ=58.91;MQ0=0;QD=27.66;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1743,126,0
CP000253.1 2583858 . A G 1540.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7429;MLEAC=2;MLEAF=1.00;MQ=59.32;MQ0=0;MQRankSum=-0.160;QD=28.01;ReadPosRankSum=-0.210;SOR=0.527 GT:AD:DP:GQ:PL 1/1:1,54:55:99:1569,114,0
CP000253.1 2583866 . C T 1565.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.984;DP=53;Dels=0.00;ExcessHet=3.0103;FS=4.607;HaplotypeScore=8.7225;MLEAC=2;MLEAF=1.00;MQ=59.29;MQ0=0;MQRankSum=-0.291;QD=29.54;ReadPosRankSum=-0.357;SOR=1.359 GT:AD:DP:GQ:PL 1/1:2,51:53:99:1594,117,0
CP000253.1 2583867 . C A 1572.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7225;MLEAC=2;MLEAF=1.00;MQ=59.29;MQ0=0;QD=30.84;SOR=1.565 GT:AD:DP:GQ:PL 1/1:0,51:53:99:1601,117,0
CP000253.1 2583872 . T C 1590.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.170;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8621;MLEAC=2;MLEAF=1.00;MQ=59.29;MQ0=0;MQRankSum=-0.165;QD=30.59;ReadPosRankSum=-0.216;SOR=1.394 GT:AD:DP:GQ:PL 1/1:1,51:53:99:1619,117,0
CP000253.1 2583873 . C T 1591.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.938;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3395;MLEAC=2;MLEAF=1.00;MQ=59.30;MQ0=0;MQRankSum=-0.291;QD=30.03;ReadPosRankSum=2.209;SOR=1.359 GT:AD:DP:GQ:PL 1/1:2,51:54:99:1620,117,0
CP000253.1 2583878 . T C 1482.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2455;MLEAC=2;MLEAF=1.00;MQ=59.30;MQ0=0;QD=27.46;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1511,111,0
CP000253.1 2583977 . C T 2889.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2918,211,0
CP000253.1 2583978 . G C 2778.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4528;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,112:113:99:2807,202,0
CP000253.1 2583979 . A C 2670.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.538;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.64;ReadPosRankSum=-1.199;SOR=0.323 GT:AD:DP:GQ:PL 1/1:1,112:114:99:2699,199,0
CP000253.1 2583994 . G A 2986.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.385;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.68;ReadPosRankSum=-0.397;SOR=0.892 GT:AD:DP:GQ:PL 1/1:2,119:123:99:3015,220,0
CP000253.1 2584028 . C T 3024.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.39;ReadPosRankSum=-1.398;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,123:124:99:3053,217,0
CP000253.1 2584046 . A G 3389.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:132:99:3418,244,0
CP000253.1 2584053 . T C 3287.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.548;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.29;ReadPosRankSum=0.397;SOR=0.112 GT:AD:DP:GQ:PL 1/1:2,128:130:99:3316,238,0
CP000253.1 2584075 . G T 3360.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=862.7396;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.89;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3389,241,0
CP000253.1 2584112 . T C 3568.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3204;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3597,256,0
CP000253.1 2584248 . T A 3576.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1227;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=23.85;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3605,253,0
CP000253.1 2584344 . G A 2862.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9114;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=1.074 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2891,202,0
CP000253.1 2584628 . G T 220.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:249,18,0
CP000253.1 2584672 . T C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2584714 . A G 772.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:57:801,57,0
CP000253.1 2584715 . C T 794.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:57:823,57,0
CP000253.1 2584777 . T A 1180.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1209,84,0
CP000253.1 2584785 . A C 1215.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1244,87,0
CP000253.1 2584819 . G C 1183.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8914;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1212,84,0
CP000253.1 2584922 . A G 729.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.81;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:54:758,54,0
CP000253.1 2584930 . A G 786.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3452;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:57:815,57,0
CP000253.1 2585216 . C T 4128.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.985;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.29;ReadPosRankSum=-0.031;SOR=0.554 GT:AD:DP:GQ:PL 1/1:1,169:170:99:4157,289,0
CP000253.1 2585267 . G A 4491.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6292;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,191:191:99:4520,313,0
CP000253.1 2585378 . C T 4136.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.782;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=0.983;SOR=0.271 GT:AD:DP:GQ:PL 1/1:1,163:164:99:4165,298,0
CP000253.1 2585489 . A G 3759.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.5554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,147:150:99:3788,274,0
CP000253.1 2585549 . T A 4522.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,179:180:99:4551,325,0
CP000253.1 2585681 . C T 5457.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.3478;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=24.04;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,227:230:99:5486,394,0
CP000253.1 2585720 . A G 5667.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5626;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=25.42;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,223:224:99:5696,409,0
CP000253.1 2585807 . T A 5569.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.870;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8629;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.43;ReadPosRankSum=0.752;SOR=0.252 GT:AD:DP:GQ:PL 1/1:1,218:220:99:5598,403,0
CP000253.1 2585999 . G A 4031.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4060,283,0
CP000253.1 2586029 . C T 3837.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5939;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.47;SOR=1.171 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3866,274,0
CP000253.1 2586062 . C T 3420.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.907;DP=130;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.94;ReadPosRankSum=-1.706;SOR=0.451 GT:AD:DP:GQ:PL 1/1:1,126:128:99:3449,247,0
CP000253.1 2586092 . T C 2735.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.31;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2764,199,0
CP000253.1 2586325 . C G 2864.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.831;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2197;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.53;ReadPosRankSum=-0.193;SOR=0.889 GT:AD:DP:GQ:PL 1/1:1,107:108:99:2893,208,0
CP000253.1 2586403 . G C 5203.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.803;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4137;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.69;ReadPosRankSum=-0.925;SOR=0.536 GT:AD:DP:GQ:PL 1/1:1,194:195:99:5232,376,0
CP000253.1 2586483 . T G 5946.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.443;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.2670;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=0.606;SOR=0.982 GT:AD:DP:GQ:PL 1/1:2,241:245:99:5975,424,0
CP000253.1 2586498 . T C 6121.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.877;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.30;ReadPosRankSum=-1.396;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,241:243:99:6150,433,0
CP000253.1 2586513 . T A 5979.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3818;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.31;ReadPosRankSum=-0.035;SOR=0.449 GT:AD:DP:GQ:PL 1/1:1,245:247:99:6008,427,0
CP000253.1 2586526 . G A 6084.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4583;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,245:245:99:6113,430,0
CP000253.1 2586532 . G A 6096.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.912;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7240;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.78;ReadPosRankSum=1.733;SOR=0.254 GT:AD:DP:GQ:PL 1/1:1,245:247:99:6125,433,0
CP000253.1 2586592 . G A 6041.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3554;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,242:244:99:6070,424,0
CP000253.1 2586718 . C A 6057.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3254;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=27.66;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,219:219:99:6086,442,0
CP000253.1 2586724 . T C 5795.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.057;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2558;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=27.08;ReadPosRankSum=-0.166;SOR=0.876 GT:AD:DP:GQ:PL 1/1:2,212:215:99:5824,386,0
CP000253.1 2586745 . A G 5662.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3073;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=27.76;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,204:206:99:5691,412,0
CP000253.1 2586748 . C T 5748.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2644;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=28.46;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,202:203:99:5777,415,0
CP000253.1 2586754 . A G 5667.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.909;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4762;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=0.000;QD=27.65;ReadPosRankSum=1.276;SOR=0.513 GT:AD:DP:GQ:PL 1/1:1,204:207:99:5696,409,0
CP000253.1 2586883 . T A 4713.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.681;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=43.2925;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=0.000;QD=24.94;ReadPosRankSum=-1.476;SOR=0.291 GT:AD:DP:GQ:PL 1/1:1,188:193:99:4742,337,0
CP000253.1 2587117 . C T 3289.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.803;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.65;ReadPosRankSum=0.073;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,118:119:99:3318,241,0
CP000253.1 2587144 . C G 3121.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,122:123:99:3150,229,0
CP000253.1 2587198 . T C 2821.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,115:117:99:2850,205,0
CP000253.1 2587248 . T C 3274.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3303,235,0
CP000253.1 2587285 . A G 3034.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6610;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3063,214,0
CP000253.1 2587294 . C T 2846.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2875,199,0
CP000253.1 2587297 . A G 2858.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1838;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2887,205,0
CP000253.1 2587309 . A C 2877.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.275;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.78;ReadPosRankSum=-0.573;SOR=0.237 GT:AD:DP:GQ:PL 1/1:1,120:121:99:2906,173,0
CP000253.1 2587321 . C G 2906.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.614;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.25;ReadPosRankSum=1.733;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,124:125:99:2935,208,0
CP000253.1 2587342 . C A 2970.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1866;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2999,211,0
CP000253.1 2587347 . G A 2810.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0331;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,118:120:99:2839,199,0
CP000253.1 2587358 . T C 2670.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0629;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,111:112:99:2699,190,0
CP000253.1 2587525 . C T 1598.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1627,114,0
CP000253.1 2587529 . G A 1660.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.741;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.73;ReadPosRankSum=-1.535;SOR=0.259 GT:AD:DP:GQ:PL 1/1:1,69:70:99:1689,120,0
CP000253.1 2587534 . T A 1733.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1762,129,0
CP000253.1 2587552 . C A 1910.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4103;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1939,138,0
CP000253.1 2587555 . T C 1883.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1912,138,0
CP000253.1 2587558 . G A 1929.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1958,141,0
CP000253.1 2587570 . G A 2061.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1775;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.43;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2090,147,0
CP000253.1 2587717 . C T 1332.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,53:54:96:1361,96,0
CP000253.1 2587723 . G A 1242.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7523;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:90:1271,90,0
CP000253.1 2587726 . G A 1202.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1231,87,0
CP000253.1 2587731 . T G 1257.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8938;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:90:1286,90,0
CP000253.1 2587741 . G C 1277.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7812;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:50:93:1306,93,0
CP000253.1 2587747 . T C 1226.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1255,90,0
CP000253.1 2587753 . A T 1122.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1151,81,0
CP000253.1 2587755 . C T 1130.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1159,81,0
CP000253.1 2587756 . A G 1167.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1196,84,0
CP000253.1 2587765 . A T 1382.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=1.077 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1411,99,0
CP000253.1 2587773 . G A 1733.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1762,126,0
CP000253.1 2587777 . T C 1733.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1762,126,0
CP000253.1 2587843 . T G 2124.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2153,153,0
CP000253.1 2587866 . T C 2073.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2102,147,0
CP000253.1 2588001 . G A 2969.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9409;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=1.109 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2998,214,0
CP000253.1 2588022 . T C 2969.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,117:118:99:2998,214,0
CP000253.1 2588190 . A G 5537.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8682;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=1.106 GT:AD:DP:GQ:PL 1/1:0,216:217:99:5566,400,0
CP000253.1 2588193 . A G 5721.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.776;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.66;ReadPosRankSum=1.329;SOR=0.403 GT:AD:DP:GQ:PL 1/1:1,222:224:99:5750,412,0
CP000253.1 2588256 . C T 6384.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.0980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,243:246:99:6413,460,0
CP000253.1 2588321 . G T 6496.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.2009;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6525,469,0
CP000253.1 2588360 . A G 6335.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6651;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,243:246:99:6364,451,0
CP000253.1 2588376 . A G 6343.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6372,451,0
CP000253.1 2588562 . G A 4809.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,174:176:99:4838,349,0
CP000253.1 2588661 . C T 2792.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2458;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.93;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2821,202,0
CP000253.1 2588695 . A C 1830.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1859,132,0
CP000253.1 2588699 . T A 1742.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1771,126,0
CP000253.1 2588701 . A T 1787.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5635;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1816,129,0
CP000253.1 2588722 . C T 2415.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.84;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2444,172,0
CP000253.1 2588724 . A C 2359.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2388,169,0
CP000253.1 2588726 . C A 2493.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.925;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.98;ReadPosRankSum=1.413;SOR=0.288 GT:AD:DP:GQ:PL 1/1:1,95:96:99:2522,178,0
CP000253.1 2588748 . T C 2828.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.922;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.72;ReadPosRankSum=1.184;SOR=0.491 GT:AD:DP:GQ:PL 1/1:1,109:110:99:2857,202,0
CP000253.1 2588755 . T G 2693.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2722,190,0
CP000253.1 2588768 . A G 2619.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7135;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,108:109:99:2648,190,0
CP000253.1 2588773 . G A 2772.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2801,199,0
CP000253.1 2588886 . T C 3193.69 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9901;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.998 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3222,229,0
CP000253.1 2589021 . A G 3223.52 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3252,235,0
CP000253.1 2589026 . C A 3335.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.991;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8292;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.46;ReadPosRankSum=1.733;SOR=0.321 GT:AD:DP:GQ:PL 1/1:1,130:131:99:3364,235,0
CP000253.1 2589028 . A T 3066.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3095,223,0
CP000253.1 2589063 . A G 3128.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3157,226,0
CP000253.1 2589075 . A G 2891.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8952;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2920,208,0
CP000253.1 2589080 . C A 2835.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.636;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2237;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=-0.184;SOR=0.636 GT:AD:DP:GQ:PL 1/1:1,112:113:99:2864,205,0
CP000253.1 2589084 . T C 2768.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.916 GT:AD:DP:GQ:PL 1/1:0,107:110:99:2797,199,0
CP000253.1 2589276 . A G 2945.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3568;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2974,208,0
CP000253.1 2589306 . A G 2990.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7587;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3019,211,0
CP000253.1 2589315 . A G 3388.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3417,241,0
CP000253.1 2589324 . C T 3429.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3458,241,0
CP000253.1 2589573 . T C 1733.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1762,126,0
CP000253.1 2589577 . T C 1714.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1743,123,0
CP000253.1 2589621 . C T 1161.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:84:1190,84,0
CP000253.1 2589627 . A T 1163.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:84:1192,84,0
CP000253.1 2589645 . A T 1831.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.719;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5901;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=1.399;SOR=0.574 GT:AD:DP:GQ:PL 1/1:1,74:75:99:1860,132,0
CP000253.1 2589688 . C A 2006.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.802;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4283;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.30;ReadPosRankSum=0.619;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2035,141,0
CP000253.1 2589698 . C T 2159.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2188,151,0
CP000253.1 2589703 . T C 2193.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.830;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9779;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.85;ReadPosRankSum=1.142;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,95:96:99:2222,157,0
CP000253.1 2589709 . A T 2521.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.14;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2550,178,0
CP000253.1 2589720 . A G 2782.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,119:119:99:2811,199,0
CP000253.1 2589938 . A G 3262.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3291,229,0
CP000253.1 2590088 . G C 1774.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5233;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1803,126,0
CP000253.1 2590103 . A G 1790.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1819,126,0
CP000253.1 2590124 . G A 1766.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0322;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1795,123,0
CP000253.1 2590535 . T C 1938.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6418;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1967,138,0
CP000253.1 2590571 . G A 1996.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2025,141,0
CP000253.1 2590683 . G C 2551.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2580,181,0
CP000253.1 2590827 . T C 4984.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.855;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7551;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.62;ReadPosRankSum=-0.025;SOR=0.284 GT:AD:DP:GQ:PL 1/1:1,210:213:99:5013,346,0
CP000253.1 2591063 . C T 3054.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2711;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=1.142 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3083,217,0
CP000253.1 2591196 . A T 380.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:30:409,30,0
CP000253.1 2591320 . G T 349.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:27:378,27,0
CP000253.1 2591345 . A G 404.77 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.91;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:33:433,33,0
CP000253.1 2591409 . T C 757.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0123;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:57:786,57,0
CP000253.1 2591548 . A G 2063.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2092,144,0
CP000253.1 2591571 . C T 2213.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2242,154,0
CP000253.1 2591584 . A G 2270.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6777;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2299,159,0
CP000253.1 2591596 . T C 2412.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2441,169,0
CP000253.1 2591605 . A G 2510.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2539,175,0
CP000253.1 2591657 . G A 2383.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2412,169,0
CP000253.1 2591713 . C T 2209.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.823;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.26;ReadPosRankSum=0.967;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,94:95:99:2238,157,0
CP000253.1 2591776 . G A 1362.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8938;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1391,96,0
CP000253.1 2592293 . C A 1886.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8603;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,82:83:99:1915,132,0
CP000253.1 2592538 . A C 520.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.70;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:39:549,39,0
CP000253.1 2593082 . G A 435.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:33:464,33,0
CP000253.1 2593204 . C G 266.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:295,21,0
CP000253.1 2593314 . C G 344.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:373,27,0
CP000253.1 2593371 . C T 334.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:27:363,27,0
CP000253.1 2593395 . C T 353.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:382,27,0
CP000253.1 2593405 . A C 391.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.482;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.49;ReadPosRankSum=1.034;SOR=1.061 GT:AD:DP:GQ:PL 1/1:2,14:16:30:420,30,0
CP000253.1 2593406 . T C 423.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.49;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:33:452,33,0
CP000253.1 2593407 . T G 344.78 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.796;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.55;ReadPosRankSum=-0.869;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,15:16:27:373,27,0
CP000253.1 2593453 . A T 655.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:48:684,48,0
CP000253.1 2593475 . T A 880.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2540;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:63:909,63,0
CP000253.1 2593622 . C T 2681.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2710,190,0
CP000253.1 2593820 . G A 3825.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2638;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,163:164:99:3854,265,0
CP000253.1 2593865 . A G 3462.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9536;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3491,247,0
CP000253.1 2594116 . C T 3370.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3399,244,0
CP000253.1 2594408 . A G 6286.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.712;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.45;ReadPosRankSum=1.228;SOR=0.120 GT:AD:DP:GQ:PL 1/1:2,245:248:99:6315,448,0
CP000253.1 2594429 . G A 6074.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.568;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.2631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=1.065;SOR=0.744 GT:AD:DP:GQ:PL 1/1:2,240:245:99:6103,433,0
CP000253.1 2594447 . T C 5557.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.9600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,225:226:99:5586,397,0
CP000253.1 2594648 . T G 4007.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.933;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1509;MLEAC=2;MLEAF=1.00;MQ=59.80;MQ0=0;MQRankSum=6.225;QD=25.69;ReadPosRankSum=0.844;SOR=0.239 GT:AD:DP:GQ:PL 1/1:2,154:157:99:4036,272,0
CP000253.1 2594675 . C T 3564.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1773;MLEAC=2;MLEAF=1.00;MQ=59.77;MQ0=0;QD=26.21;SOR=1.187 GT:AD:DP:GQ:PL 1/1:0,136:138:99:3593,253,0
CP000253.1 2595015 . G A 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2595105 . T A 649.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:678,48,0
CP000253.1 2595115 . A G 581.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:610,42,0
CP000253.1 2595116 . A C 616.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:645,45,0
CP000253.1 2595117 . C T 581.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:610,42,0
CP000253.1 2595140 . G A 780.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:57:809,57,0
CP000253.1 2595156 . A G 700.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:51:729,51,0
CP000253.1 2595166 . T C 620.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:649,45,0
CP000253.1 2595168 . C T 629.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:658,45,0
CP000253.1 2595169 . T A 658.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:48:687,48,0
CP000253.1 2595224 . T C 436.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.84;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:465,33,0
CP000253.1 2595242 . G A 437.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:466,33,0
CP000253.1 2595253 . A C 402.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:431,30,0
CP000253.1 2595265 . A G 316.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.12;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:24:345,24,0
CP000253.1 2595355 . C T 174.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:15:203,15,0
CP000253.1 2595403 . A T 260.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:289,21,0
CP000253.1 2595404 . C T 269.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:298,21,0
CP000253.1 2595445 . T C 585.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:45:614,45,0
CP000253.1 2595481 . T C 721.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:30:54:750,54,0
CP000253.1 2595499 . T C 975.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:72:1004,72,0
CP000253.1 2595715 . T C 4489.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,202:202:99:4518,310,0
CP000253.1 2595769 . T A 4618.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,199:200:99:4647,319,0
CP000253.1 2595775 . C T 4338.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,188:188:99:4367,301,0
CP000253.1 2595808 . T G 4015.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0575;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4044,280,0
CP000253.1 2595950 . C T 769.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:54:798,54,0
CP000253.1 2595979 . A C 677.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.187;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.18;ReadPosRankSum=1.737;SOR=0.321 GT:AD:DP:GQ:PL 1/1:1,31:32:48:706,48,0
CP000253.1 2595992 . G A 604.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.975;DP=29;Dels=0.00;ExcessHet=3.0103;FS=3.332;HaplotypeScore=27.9933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.86;ReadPosRankSum=-1.079;SOR=0.673 GT:AD:DP:GQ:PL 1/1:1,28:29:21:633,21,0
CP000253.1 2597787 . C T 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 2597807 . T C 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 2597816 . G A 408.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.71;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:437,30,0
CP000253.1 2597833 . T C 535.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:39:564,39,0
CP000253.1 2597923 . G A 545.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:574,39,0
CP000253.1 2597933 . T C 496.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:525,36,0
CP000253.1 2597937 . G A 500.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.76;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:529,36,0
CP000253.1 2597951 . A G 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 2597963 . G A 362.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:27:391,27,0
CP000253.1 2598086 . A G 836.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:60:865,60,0
CP000253.1 2598255 . G A 1600.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1629,111,0
CP000253.1 2598279 . G A 1545.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1574,108,0
CP000253.1 2598300 . C T 1522.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1551,108,0
CP000253.1 2598499 . A G 1023.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:72:1052,72,0
CP000253.1 2598534 . T C 985.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.567;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4709;MLEAC=2;MLEAF=1.00;MQ=59.25;MQ0=0;MQRankSum=6.636;QD=22.40;ReadPosRankSum=2.058;SOR=0.788 GT:AD:DP:GQ:PL 1/1:2,42:45:33:1014,33,0
CP000253.1 2598585 . A G 838.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.667;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.67;ReadPosRankSum=0.986;SOR=0.395 GT:AD:DP:GQ:PL 1/1:1,36:37:60:867,60,0
CP000253.1 2598586 . G T 826.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:37:60:855,60,0
CP000253.1 2598633 . A G 678.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.90;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:48:707,48,0
CP000253.1 2598853 . T C 355.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:27:384,27,0
CP000253.1 2598883 . T C 349.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:378,27,0
CP000253.1 2599225 . C T 763.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:54:792,54,0
CP000253.1 2599282 . A T 1034.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1720;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.02;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:72:1063,72,0
CP000253.1 2599294 . A T 1026.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5010;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.85;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:72:1055,72,0
CP000253.1 2599453 . A G 447.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.39;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:476,33,0
CP000253.1 2599565 . A G 181.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:210,15,0
CP000253.1 2599569 . T A 185.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:214,15,0
CP000253.1 2599570 . C A 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 2599648 . C T 347.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.74;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:376,27,0
CP000253.1 2599662 . A C 344.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.55;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:373,27,0
CP000253.1 2599717 . C T 123.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:151,12,0
CP000253.1 2599739 . G A 134.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:162,12,0
CP000253.1 2599751 . C T 213.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.44;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:242,18,0
CP000253.1 2599780 . G A 320.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.39;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:349,24,0
CP000253.1 2599781 . T C 284.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:313,21,0
CP000253.1 2599819 . T C 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2600086 . T C 1574.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3524;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1603,111,0
CP000253.1 2600125 . C T 1652.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1681,117,0
CP000253.1 2600185 . C T 1725.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1754,123,0
CP000253.1 2600247 . A G 1593.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1622,114,0
CP000253.1 2600302 . A G 1143.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:50:84:1172,84,0
CP000253.1 2600649 . C T 3478.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3507,247,0
CP000253.1 2600695 . T C 4053.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.828;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.13;ReadPosRankSum=1.423;SOR=0.517 GT:AD:DP:GQ:PL 1/1:1,167:168:99:4082,286,0
CP000253.1 2601007 . A G 3677.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3039;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3706,271,0
CP000253.1 2601032 . G A 3894.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7240;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,149:151:99:3923,280,0
CP000253.1 2601041 . G A 4157.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4865;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4186,304,0
CP000253.1 2601154 . C T 4622.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,191:193:99:4651,328,0
CP000253.1 2601157 . T G 4905.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,200:202:99:4934,352,0
CP000253.1 2601178 . C T 5418.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4759;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,215:215:99:5447,382,0
CP000253.1 2601380 . C T 5977.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3567;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.60;SOR=0.805 GT:AD:DP:GQ:PL 1/1:0,243:245:99:6006,424,0
CP000253.1 2601394 . T C 5824.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.858;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.5613;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.27;ReadPosRankSum=0.569;SOR=0.405 GT:AD:DP:GQ:PL 1/1:3,237:242:99:5853,421,0
CP000253.1 2601397 . C G 5943.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,241:242:99:5972,427,0
CP000253.1 2601418 . C T 5994.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2056;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,244:244:99:6023,424,0
CP000253.1 2601454 . G A 5737.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.866;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0009;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.17;ReadPosRankSum=-1.125;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,227:229:99:5766,409,0
CP000253.1 2601460 . G A 5767.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,228:229:99:5796,412,0
CP000253.1 2601470 . C T 5481.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5510,394,0
CP000253.1 2601472 . T A 5660.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.933;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1296;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.73;ReadPosRankSum=0.055;SOR=0.242 GT:AD:DP:GQ:PL 1/1:1,219:220:99:5689,406,0
CP000253.1 2601625 . C T 5201.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.2193;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=24.89;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,209:209:99:5230,373,0
CP000253.1 2601671 . C T 5447.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0509;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=25.46;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,214:215:99:5476,391,0
CP000253.1 2601673 . A G 5537.77 . AC=2;AF=1.00;AN=2;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1612;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=25.52;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,217:217:99:5566,394,0
CP000253.1 2601691 . T A 5677.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1952;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=24.37;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,233:238:99:5706,403,0
CP000253.1 2601775 . C T 5338.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6118;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,224:227:99:5367,376,0
CP000253.1 2601781 . T C 5416.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8790;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,228:229:99:5445,379,0
CP000253.1 2601829 . T G 4498.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.5946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,191:193:99:4527,319,0
CP000253.1 2601898 . G T 3480.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3509,247,0
CP000253.1 2601909 . C T 1573.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6931;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.61;SOR=1.238 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1602,114,0
CP000253.1 2601912 . G A 1415.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6931;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.76;SOR=1.201 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1444,102,0
CP000253.1 2601913 . C T 1399.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=54.7843;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.45;SOR=1.201 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1428,102,0
CP000253.1 2601925 . G T 1457.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=297.6845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.03;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1486,105,0
CP000253.1 2601929 . C T 1446.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=197.1677;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1475,105,0
CP000253.1 2601932 . T G 1451.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=49.2919;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1480,108,0
CP000253.1 2601956 . A G 2149.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=1.013 GT:AD:DP:GQ:PL 1/1:0,84:85:99:2178,154,0
CP000253.1 2602117 . A G 799.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:57:828,57,0
CP000253.1 2602132 . C T 789.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.23;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:57:818,57,0
CP000253.1 2602661 . C T 3678.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9637;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3707,259,0
CP000253.1 2602664 . T A 3387.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.692;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2737;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.14;ReadPosRankSum=-0.600;SOR=0.268 GT:AD:DP:GQ:PL 1/1:1,152:153:99:3416,241,0
CP000253.1 2602670 . C T 3541.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7428;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,152:153:99:3570,250,0
CP000253.1 2602685 . G A 3754.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5944;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3783,262,0
CP000253.1 2602721 . A G 4470.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.3352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4499,316,0
CP000253.1 2602865 . T C 3870.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.278;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.65;ReadPosRankSum=-2.043;SOR=0.843 GT:AD:DP:GQ:PL 1/1:2,155:159:99:3899,246,0
CP000253.1 2602946 . T C 3081.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.758;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.46;ReadPosRankSum=0.509;SOR=0.675 GT:AD:DP:GQ:PL 1/1:1,125:127:99:3110,223,0
CP000253.1 2602985 . A C 2620.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.61;ReadPosRankSum=1.577;SOR=0.837 GT:AD:DP:GQ:PL 1/1:1,110:112:99:2649,190,0
CP000253.1 2602989 . C T 2795.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3302;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2824,199,0
CP000253.1 2603312 . T C 872.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=1.418 GT:AD:DP:GQ:PL 1/1:0,34:34:66:901,66,0
CP000253.1 2603335 . G T 1622.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1651,117,0
CP000253.1 2603468 . G A 2751.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4446;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:118:99:2780,193,0
CP000253.1 2603471 . C A 2814.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2843,199,0
CP000253.1 2603493 . T A 2934.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3747;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2963,205,0
CP000253.1 2603494 . G C 2975.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2687;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3004,211,0
CP000253.1 2603507 . A C 3063.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2569;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3092,217,0
CP000253.1 2603585 . G T 4059.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.895 GT:AD:DP:GQ:PL 1/1:0,161:162:99:4088,289,0
CP000253.1 2603666 . T C 5432.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4433;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,222:223:99:5461,382,0
CP000253.1 2603741 . A T 6183.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.618;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=1.728;SOR=0.341 GT:AD:DP:GQ:PL 1/1:2,246:249:99:6212,439,0
CP000253.1 2603773 . T C 6191.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4918;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6220,445,0
CP000253.1 2603774 . C T 6288.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,247:247:99:6317,445,0
CP000253.1 2603796 . G T 6009.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.5699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.43;ReadPosRankSum=1.543;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,245:247:99:6038,433,0
CP000253.1 2603843 . A C 6150.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,242:242:99:6179,439,0
CP000253.1 2603918 . C T 5027.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.755;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1445;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.41;ReadPosRankSum=0.538;SOR=0.288 GT:AD:DP:GQ:PL 1/1:1,205:206:99:5056,355,0
CP000253.1 2603921 . T C 5128.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.874;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3325;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.78;ReadPosRankSum=-0.075;SOR=0.477 GT:AD:DP:GQ:PL 1/1:1,206:207:99:5157,361,0
CP000253.1 2603933 . C T 4760.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,193:193:99:4789,334,0
CP000253.1 2603939 . A G 4626.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=1.018 GT:AD:DP:GQ:PL 1/1:0,182:183:99:4655,331,0
CP000253.1 2603957 . T C 4158.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.448;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.61;ReadPosRankSum=1.754;SOR=1.004 GT:AD:DP:GQ:PL 1/1:2,167:169:99:4187,259,0
CP000253.1 2603966 . T C 3887.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.167;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.15;ReadPosRankSum=1.401;SOR=0.897 GT:AD:DP:GQ:PL 1/1:2,159:161:99:3916,238,0
CP000253.1 2603972 . C T 3826.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.847;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2626;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.69;ReadPosRankSum=1.513;SOR=0.970 GT:AD:DP:GQ:PL 1/1:2,153:157:99:3855,238,0
CP000253.1 2603978 . A T 3797.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.654;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3447;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.99;ReadPosRankSum=1.584;SOR=0.959 GT:AD:DP:GQ:PL 1/1:2,150:152:99:3826,232,0
CP000253.1 2603990 . T A 3526.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.660;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.74;ReadPosRankSum=1.760;SOR=1.089 GT:AD:DP:GQ:PL 1/1:2,135:138:99:3555,222,0
CP000253.1 2603992 . T G 3446.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.334;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1738;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.53;ReadPosRankSum=1.720;SOR=0.681 GT:AD:DP:GQ:PL 1/1:3,132:136:99:3475,211,0
CP000253.1 2604033 . C T 3185.74 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.33;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3214,229,0
CP000253.1 2604040 . G A 3155.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.97;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3184,229,0
CP000253.1 2604047 . C A 3000.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.53;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3029,217,0
CP000253.1 2604056 . A T 2886.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.23;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2915,211,0
CP000253.1 2604062 . A T 1467.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1496,105,0
CP000253.1 2604064 . C T 1440.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1469,105,0
CP000253.1 2604068 . C T 1218.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.49;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:87:1247,87,0
CP000253.1 2604074 . A T 1528.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1557,108,0
CP000253.1 2604080 . T C 1609.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1638,114,0
CP000253.1 2604107 . T C 1701.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1730,123,0
CP000253.1 2604110 . G T 1863.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1892,132,0
CP000253.1 2604116 . C A 1865.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1894,132,0
CP000253.1 2604122 . G A 1784.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1813,126,0
CP000253.1 2604137 . A C 2002.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6498;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.35;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2031,141,0
CP000253.1 2604245 . A G 2475.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9912;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2504,178,0
CP000253.1 2604395 . T G 2737.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.672;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0277;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.44;ReadPosRankSum=1.268;SOR=0.367 GT:AD:DP:GQ:PL 1/1:1,111:112:99:2766,199,0
CP000253.1 2604512 . G T 3514.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3543,250,0
CP000253.1 2604581 . T A 3762.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5305;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3791,268,0
CP000253.1 2604689 . C T 4150.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.821;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7529;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.19;ReadPosRankSum=-1.414;SOR=0.272 GT:AD:DP:GQ:PL 1/1:1,178:179:99:4179,292,0
CP000253.1 2604713 . T C 3933.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,166:166:99:3962,277,0
CP000253.1 2604714 . G A 3805.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7473;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,160:161:99:3834,268,0
CP000253.1 2604806 . C T 3650.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.807;DP=154;Dels=0.00;ExcessHet=3.0103;FS=3.302;HaplotypeScore=4.5915;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.71;ReadPosRankSum=1.688;SOR=0.457 GT:AD:DP:GQ:PL 1/1:1,153:154:99:3679,234,0
CP000253.1 2604812 . G A 3658.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,148:148:99:3687,259,0
CP000253.1 2604824 . C T 2934.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2963,208,0
CP000253.1 2604848 . A T 2495.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2524,178,0
CP000253.1 2604907 . G A 1678.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1707,120,0
CP000253.1 2604956 . A T 1129.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:84:1158,84,0
CP000253.1 2604959 . A G 1127.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:84:1156,84,0
CP000253.1 2605026 . C T 888.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:63:917,63,0
CP000253.1 2605048 . C T 920.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.92;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:66:949,66,0
CP000253.1 2605480 . A G 2432.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2461,175,0
CP000253.1 2605489 . A C 2286.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8566;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=1.053 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2315,163,0
CP000253.1 2605512 . G C 2018.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=63.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2047,144,0
CP000253.1 2605527 . T A 20.80 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.955;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=67.1164;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=0.29;ReadPosRankSum=-4.430;SOR=0.453 GT:AD:DP:GQ:PL 0/1:63,8:71:49:49,0,1434
CP000253.1 2605529 . T A 1379.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.256;DP=70;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=67.1164;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.00;ReadPosRankSum=4.165;SOR=0.722 GT:AD:DP:GQ:PL 0/1:7,62:69:45:1408,0,45
CP000253.1 2605566 . A G 1319.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,52:53:96:1348,96,0
CP000253.1 2605598 . C T 1220.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1249,87,0
CP000253.1 2605607 . C T 1255.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:90:1284,90,0
CP000253.1 2605610 . T C 1211.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:87:1240,87,0
CP000253.1 2605633 . G A 1150.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1179,84,0
CP000253.1 2605637 . T C 1128.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1157,81,0
CP000253.1 2605671 . G T 1034.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:75:1063,75,0
CP000253.1 2605705 . C T 780.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:57:809,57,0
CP000253.1 2605715 . T A 734.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:54:763,54,0
CP000253.1 2605904 . C G 2650.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2679,184,0
CP000253.1 2605937 . A C 2407.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2436,169,0
CP000253.1 2605942 . G A 2387.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2416,166,0
CP000253.1 2606177 . A C 1504.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1533,108,0
CP000253.1 2606234 . T A 2225.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2254,163,0
CP000253.1 2606316 . T C 3447.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3476,250,0
CP000253.1 2606406 . G A 4046.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8562;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.23;SOR=1.035 GT:AD:DP:GQ:PL 1/1:0,167:169:99:4075,289,0
CP000253.1 2606490 . C T 4847.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6580;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,191:192:99:4876,349,0
CP000253.1 2606872 . T G 4024.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7190;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4053,289,0
CP000253.1 2607036 . G A 1317.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1346,96,0
CP000253.1 2607107 . G T 1511.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1540,111,0
CP000253.1 2607156 . A T 2749.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.908;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6549;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.23;ReadPosRankSum=-0.621;SOR=0.588 GT:AD:DP:GQ:PL 1/1:1,108:109:99:2778,196,0
CP000253.1 2607183 . C A 2640.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6158;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2669,196,0
CP000253.1 2607207 . G A 2963.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3610;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2992,211,0
CP000253.1 2607246 . C A 3348.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9143;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3377,235,0
CP000253.1 2607351 . A G 3468.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4709;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,145:146:99:3497,244,0
CP000253.1 2607450 . A G 2807.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,113:114:99:2836,202,0
CP000253.1 2607803 . C A 765.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.36;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:57:794,57,0
CP000253.1 2607819 . G A 491.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.78;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,15:16:39:520,39,0
CP000253.1 2607875 . A G 178.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:7:15:207,15,0
CP000253.1 2607934 . G A 185.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.66;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:214,15,0
CP000253.1 2607999 . G A 265.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:294,21,0
CP000253.1 2608333 . T C 3416.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.881;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5762;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.56;ReadPosRankSum=0.920;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,144:145:99:3445,238,0
CP000253.1 2608445 . G A 3132.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.988;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.67;ReadPosRankSum=1.241;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,126:127:99:3161,223,0
CP000253.1 2608513 . T C 2855.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.997;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.96;ReadPosRankSum=1.450;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,109:111:99:2884,205,0
CP000253.1 2608588 . C T 1737.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1766,126,0
CP000253.1 2608852 . A T 3009.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3038,211,0
CP000253.1 2609076 . G A 509.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:39:538,39,0
CP000253.1 2609103 . A T 571.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:600,42,0
CP000253.1 2609121 . A G 651.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.14;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:48:680,48,0
CP000253.1 2609135 . C T 612.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:26:45:641,45,0
CP000253.1 2609159 . A C 955.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8808;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:72:984,72,0
CP000253.1 2609165 . T G 956.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.34;ReadPosRankSum=-1.397;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,40:41:69:985,69,0
CP000253.1 2609221 . A G 1314.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.989;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.30;ReadPosRankSum=-0.592;SOR=0.829 GT:AD:DP:GQ:PL 1/1:1,49:50:96:1343,96,0
CP000253.1 2609277 . T C 2306.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.773;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2462;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.07;ReadPosRankSum=-0.340;SOR=0.453 GT:AD:DP:GQ:PL 1/1:1,91:92:99:2335,140,0
CP000253.1 2609292 . A G 2511.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=108;Dels=0.00;ExcessHet=3.0103;FS=2.918;HaplotypeScore=8.8259;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.47;ReadPosRankSum=0.438;SOR=0.178 GT:AD:DP:GQ:PL 1/1:2,105:108:99:2540,113,0
CP000253.1 2609294 . A G 2621.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.687;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8745;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.05;ReadPosRankSum=0.362;SOR=0.177 GT:AD:DP:GQ:PL 1/1:2,107:110:99:2650,153,0
CP000253.1 2609305 . T G 3419.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.273;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.75;ReadPosRankSum=0.673;SOR=0.565 GT:AD:DP:GQ:PL 1/1:3,141:144:99:3448,173,0
CP000253.1 2609311 . C T 3419.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.121;DP=145;Dels=0.00;ExcessHet=3.0103;FS=2.888;HaplotypeScore=10.6184;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.75;ReadPosRankSum=-0.393;SOR=0.169 GT:AD:DP:GQ:PL 1/1:2,142:145:99:3448,172,0
CP000253.1 2609335 . T A 3793.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.281;DP=164;Dels=0.00;ExcessHet=3.0103;FS=2.982;HaplotypeScore=11.2384;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.27;ReadPosRankSum=-1.116;SOR=0.142 GT:AD:DP:GQ:PL 1/1:2,161:164:99:3822,196,0
CP000253.1 2609368 . A C 4463.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.655;DP=193;Dels=0.00;ExcessHet=3.0103;FS=3.002;HaplotypeScore=11.1836;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.13;ReadPosRankSum=-1.693;SOR=0.126 GT:AD:DP:GQ:PL 1/1:2,191:193:99:4492,250,0
CP000253.1 2609436 . A G 5512.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.550;DP=246;Dels=0.00;ExcessHet=3.0103;FS=3.025;HaplotypeScore=9.6034;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.50;ReadPosRankSum=-1.558;SOR=0.114 GT:AD:DP:GQ:PL 1/1:2,243:246:99:5541,315,0
CP000253.1 2609464 . G A 5595.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.596;DP=247;Dels=0.00;ExcessHet=3.0103;FS=3.028;HaplotypeScore=13.2893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.84;ReadPosRankSum=-0.586;SOR=0.120 GT:AD:DP:GQ:PL 1/1:2,243:247:99:5624,354,0
CP000253.1 2609626 . C T 3447.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.8572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3476,241,0
CP000253.1 2609686 . C T 2269.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9277;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2298,163,0
CP000253.1 2609743 . C T 1373.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1402,99,0
CP000253.1 2609812 . C G 984.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8442;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:45:75:1013,75,0
CP000253.1 2609833 . A G 1033.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8819;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:44:75:1062,75,0
CP000253.1 2609887 . A T 1325.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6624;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1354,96,0
CP000253.1 2610031 . A C 2677.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3978;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2706,190,0
CP000253.1 2610032 . A G 2579.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3978;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2608,181,0
CP000253.1 2610040 . A G 2854.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:123:99:2883,199,0
CP000253.1 2610052 . T C 2818.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:123:99:2847,196,0
CP000253.1 2610183 . C A 2398.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.886;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.75;ReadPosRankSum=0.978;SOR=0.482 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2427,169,0
CP000253.1 2610247 . A G 463.77 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.92;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:36:492,36,0
CP000253.1 2610303 . A G 254.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:283,21,0
CP000253.1 2610356 . G A 178.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:207,15,0
CP000253.1 2611122 . T G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2611134 . C T 99.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:127,9,0
CP000253.1 2611171 . T A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2611188 . G A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2611199 . A G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2611201 . C T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2611213 . C T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2611219 . A T 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2611225 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611336 . C A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611357 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611366 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611367 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611372 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611373 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611385 . G A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611387 . G T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611389 . T A 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611390 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611393 . A T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611397 . C T 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611400 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611402 . T C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2611408 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2611420 . T A 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2611618 . A G 833.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,35:35:60:862,60,0
CP000253.1 2611633 . T C 840.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:60:869,60,0
CP000253.1 2611684 . G A 737.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:766,54,0
CP000253.1 2611707 . T C 486.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:515,36,0
CP000253.1 2611802 . G A 1362.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=55.3115;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1391,96,0
CP000253.1 2611809 . T C 1354.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.19;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1383,96,0
CP000253.1 2611812 . A C 1378.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:56:99:1407,99,0
CP000253.1 2611818 . C T 1373.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1402,99,0
CP000253.1 2611823 . T C 1434.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1463,102,0
CP000253.1 2611873 . C G 1619.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5252;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.47;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1648,117,0
CP000253.1 2611875 . A G 1603.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:70:99:1632,114,0
CP000253.1 2611881 . T C 1651.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=77.0151;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1680,117,0
CP000253.1 2611949 . A G 1598.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.17;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1627,114,0
CP000253.1 2612073 . C T 1663.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6134;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1692,117,0
CP000253.1 2612084 . A T 1672.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1263;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1701,117,0
CP000253.1 2612363 . C T 2220.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6567;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2249,157,0
CP000253.1 2612384 . A T 2159.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4013;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2188,151,0
CP000253.1 2612402 . T A 2001.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2030,141,0
CP000253.1 2612405 . A G 1963.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,81:82:99:1992,138,0
CP000253.1 2612531 . C T 1265.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:90:1294,90,0
CP000253.1 2612608 . G A 699.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:51:728,51,0
CP000253.1 2612638 . T A 223.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:252,18,0
CP000253.1 2612639 . C T 223.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:252,18,0
CP000253.1 2612668 . C T 208.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:237,18,0
CP000253.1 2612679 . A G 222.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:251,18,0
CP000253.1 2612682 . T C 219.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:248,18,0
CP000253.1 2612683 . G A 178.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:207,15,0
CP000253.1 2612688 . C T 213.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:242,18,0
CP000253.1 2612690 . T G 170.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:199,15,0
CP000253.1 2612692 . T C 208.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:237,18,0
CP000253.1 2612737 . C T 519.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6590;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.99;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:39:548,39,0
CP000253.1 2612763 . G A 908.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:66:937,66,0
CP000253.1 2612764 . A T 905.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.88;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:66:934,66,0
CP000253.1 2612772 . A C 858.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.828;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8255;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.54;ReadPosRankSum=-0.551;SOR=0.405 GT:AD:DP:GQ:PL 1/1:1,34:35:63:887,63,0
CP000253.1 2612776 . A G 913.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:66:942,66,0
CP000253.1 2612777 . C T 917.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:66:946,66,0
CP000253.1 2612789 . G A 1105.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1134,78,0
CP000253.1 2612819 . T C 1836.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1865,129,0
CP000253.1 2612831 . C T 2099.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2128,147,0
CP000253.1 2612837 . T A 2078.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.75;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2107,147,0
CP000253.1 2612856 . G A 2529.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2558,178,0
CP000253.1 2612861 . A G 2558.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.4679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2587,181,0
CP000253.1 2612880 . G A 2722.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4535;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2751,190,0
CP000253.1 2612909 . G T 2852.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0505;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,124:124:99:2881,199,0
CP000253.1 2612948 . C A 2882.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3102;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:124:99:2911,202,0
CP000253.1 2612972 . A G 2912.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.12;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,126:126:99:2941,202,0
CP000253.1 2612993 . C T 2825.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9733;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,126:127:99:2854,199,0
CP000253.1 2612995 . T A 2911.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8252;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,126:127:99:2940,205,0
CP000253.1 2613002 . A T 3408.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9522;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3437,238,0
CP000253.1 2613008 . A G 3107.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.852;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0939;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.02;ReadPosRankSum=0.580;SOR=0.261 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3136,217,0
CP000253.1 2613050 . T C 3220.76 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7531;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3249,223,0
CP000253.1 2613063 . C T 3273.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3302,226,0
CP000253.1 2613068 . C G 3153.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3182,220,0
CP000253.1 2613070 . A G 3188.81 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3217,220,0
CP000253.1 2613080 . G A 3040.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.918;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9563;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.04;ReadPosRankSum=-1.553;SOR=0.229 GT:AD:DP:GQ:PL 1/1:1,131:134:99:3069,211,0
CP000253.1 2613083 . A G 2985.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3014,211,0
CP000253.1 2613105 . G A 2540.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2569,178,0
CP000253.1 2613107 . G A 2497.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2526,175,0
CP000253.1 2613110 . A T 2501.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2530,175,0
CP000253.1 2613116 . A T 2496.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2525,175,0
CP000253.1 2613119 . C T 2500.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2529,175,0
CP000253.1 2613131 . C T 2181.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.51;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2210,154,0
CP000253.1 2613134 . C T 2180.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2209,154,0
CP000253.1 2613135 . A G 2185.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2214,154,0
CP000253.1 2613147 . C A 2001.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2030,141,0
CP000253.1 2613149 . G A 2004.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2033,141,0
CP000253.1 2613152 . G A 2009.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.44;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2038,141,0
CP000253.1 2613161 . G A 1977.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2006,141,0
CP000253.1 2613164 . T C 1986.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2015,141,0
CP000253.1 2613165 . G A 1969.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1998,141,0
CP000253.1 2613166 . C A 1882.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,76:78:99:1911,132,0
CP000253.1 2613170 . T C 1949.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1978,138,0
CP000253.1 2613200 . T C 1311.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:55:93:1340,93,0
CP000253.1 2613202 . T A 1315.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.83;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,53:54:93:1344,93,0
CP000253.1 2613210 . A G 1185.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:84:1214,84,0
CP000253.1 2613213 . A T 1142.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1171,81,0
CP000253.1 2613214 . G A 1146.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1175,81,0
CP000253.1 2613215 . A C 1135.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1164,81,0
CP000253.1 2613230 . A T 1018.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:72:1047,72,0
CP000253.1 2613236 . C T 973.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1428;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:40:69:1002,69,0
CP000253.1 2613249 . C A 959.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:69:988,69,0
CP000253.1 2613260 . A G 742.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:54:771,54,0
CP000253.1 2613266 . G A 532.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:561,42,0
CP000253.1 2613303 . C A 386.77 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.75;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:13:30:415,30,0
CP000253.1 2613316 . A T 290.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.08;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:24:319,24,0
CP000253.1 2613319 . C T 295.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.58;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:24:324,24,0
CP000253.1 2613331 . T C 133.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:12:161,12,0
CP000253.1 2613333 . T A 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 2613460 . C T 101.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=28.57;MQ0=1;QD=14.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,7:7:9:129,9,0
CP000253.1 2613519 . C T 101.28 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=28.57;MQ0=1;QD=14.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,7:7:9:129,9,0
CP000253.1 2613648 . T C 1646.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1675,114,0
CP000253.1 2613666 . T A 1643.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1672,114,0
CP000253.1 2613931 . T C 1121.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1150,81,0
CP000253.1 2613935 . C T 1099.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:44:81:1128,81,0
CP000253.1 2613940 . T C 979.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:72:1008,72,0
CP000253.1 2613949 . C T 950.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:40:69:979,69,0
CP000253.1 2613959 . C T 1007.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:72:1036,72,0
CP000253.1 2613960 . T A 942.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:69:971,69,0
CP000253.1 2613962 . C G 998.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:72:1027,72,0
CP000253.1 2613964 . G A 984.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:72:1013,72,0
CP000253.1 2614029 . T C 1133.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:81:1162,81,0
CP000253.1 2614203 . G T 2290.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5283;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2319,169,0
CP000253.1 2614311 . A G 2660.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3410;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,114:117:99:2689,190,0
CP000253.1 2614665 . G A 3233.06 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6119;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.916 GT:AD:DP:GQ:PL 1/1:0,127:128:99:3260,238,0
CP000253.1 2614728 . A G 3422.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:142:99:3451,244,0
CP000253.1 2614761 . C G 3002.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,131:133:99:3031,214,0
CP000253.1 2615014 . T C 276.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:305,21,0
CP000253.1 2615119 . G A 268.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:21:297,21,0
CP000253.1 2615266 . G A 1069.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.29;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:75:1098,75,0
CP000253.1 2615293 . G A 1440.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1469,99,0
CP000253.1 2615817 . G A 2692.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2600;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,107:107:99:2721,193,0
CP000253.1 2616350 . C A 5124.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.7971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,203:203:99:5153,364,0
CP000253.1 2616408 . G A 4241.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.827;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.95;ReadPosRankSum=0.540;SOR=0.343 GT:AD:DP:GQ:PL 1/1:1,169:172:99:4270,307,0
CP000253.1 2616534 . A G 3905.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8801;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=1.142 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3934,277,0
CP000253.1 2616855 . G A 219.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:248,18,0
CP000253.1 2616938 . T C 204.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:9:18:233,18,0
CP000253.1 2616939 . A G 224.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:18:253,18,0
CP000253.1 2616957 . C T 269.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:298,21,0
CP000253.1 2616958 . T C 272.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:301,21,0
CP000253.1 2617181 . T C 157.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:186,15,0
CP000253.1 2617904 . A T 3520.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3516;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3549,250,0
CP000253.1 2618084 . A G 2087.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4736;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2116,147,0
CP000253.1 2618541 . A G 726.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:54:755,54,0
CP000253.1 2618605 . T C 989.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.38;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:72:1018,72,0
CP000253.1 2618612 . A G 855.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:63:884,63,0
CP000253.1 2618615 . G T 876.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,34:34:66:905,66,0
CP000253.1 2618640 . G A 784.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:60:813,60,0
CP000253.1 2618676 . T G 1091.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.884;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.73;ReadPosRankSum=-1.585;SOR=0.578 GT:AD:DP:GQ:PL 1/1:1,45:46:78:1120,78,0
CP000253.1 2618751 . C T 2387.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2416,172,0
CP000253.1 2618805 . A G 3103.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.47;SOR=1.129 GT:AD:DP:GQ:PL 1/1:0,113:115:99:3132,223,0
CP000253.1 2619138 . C T 5734.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6385;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,222:222:99:5763,412,0
CP000253.1 2619294 . A G 5393.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2008;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=0.817 GT:AD:DP:GQ:PL 1/1:0,204:205:99:5422,388,0
CP000253.1 2619330 . G A 4791.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.996;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.38;ReadPosRankSum=0.327;SOR=0.371 GT:AD:DP:GQ:PL 1/1:1,174:176:99:4820,343,0
CP000253.1 2619337 . G T 4852.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.931;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3287;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.96;ReadPosRankSum=0.039;SOR=0.277 GT:AD:DP:GQ:PL 1/1:1,179:180:99:4881,349,0
CP000253.1 2619355 . A T 4957.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7278;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,193:193:99:4986,352,0
CP000253.1 2619370 . T G 4944.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.688;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6010;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.23;ReadPosRankSum=0.332;SOR=0.823 GT:AD:DP:GQ:PL 1/1:2,194:196:99:4973,352,0
CP000253.1 2619399 . T G 4918.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.814;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=55.3856;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.35;ReadPosRankSum=0.652;SOR=0.614 GT:AD:DP:GQ:PL 1/1:3,199:205:99:4947,327,0
CP000253.1 2619411 . G A 5187.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.797;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.8903;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=0.899;SOR=0.316 GT:AD:DP:GQ:PL 1/1:1,211:215:99:5216,367,0
CP000253.1 2619564 . A T 4614.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4643,322,0
CP000253.1 2619664 . A T 3153.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6135;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3182,223,0
CP000253.1 2619740 . A C 4188.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4217,295,0
CP000253.1 2619762 . T C 4463.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2057;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,190:191:99:4492,313,0
CP000253.1 2619903 . C A 4205.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5277;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4234,295,0
CP000253.1 2619906 . C T 4217.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4657;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4246,292,0
CP000253.1 2620089 . C T 1051.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1316;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.97;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:78:1080,78,0
CP000253.1 2620228 . C A 2516.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2545,178,0
CP000253.1 2621067 . A G 5303.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3214;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,221:221:99:5332,379,0
CP000253.1 2621267 . C T 6689.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.864;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6133;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.76;ReadPosRankSum=0.859;SOR=0.473 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6718,479,0
CP000253.1 2621336 . T C 6081.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.8452;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,247:249:99:6110,439,0
CP000253.1 2621589 . T C 6271.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6725;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=1.106 GT:AD:DP:GQ:PL 1/1:0,245:245:99:6300,454,0
CP000253.1 2622045 . A G 3706.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.867;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3393;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.47;ReadPosRankSum=1.523;SOR=0.233 GT:AD:DP:GQ:PL 1/1:1,164:165:99:3735,224,0
CP000253.1 2622195 . C T 2420.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.448;DP=105;Dels=0.00;ExcessHet=3.0103;FS=3.181;HaplotypeScore=13.3804;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.28;ReadPosRankSum=-1.633;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,103:105:99:2449,151,0
CP000253.1 2623058 . G A 3339.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,129:129:99:3368,238,0
CP000253.1 2623105 . C G 2759.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.916 GT:AD:DP:GQ:PL 1/1:0,107:108:99:2788,199,0
CP000253.1 2623274 . A C 1006.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.446;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7791;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.37;ReadPosRankSum=0.039;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,44:45:72:1035,72,0
CP000253.1 2623302 . C A 970.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.136;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.11;ReadPosRankSum=1.740;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,41:42:36:999,36,0
CP000253.1 2623311 . T A 968.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.784;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8315;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.63;ReadPosRankSum=1.231;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,40:41:35:997,35,0
CP000253.1 2623337 . G A 1097.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.824;DP=46;Dels=0.00;ExcessHet=3.0103;FS=3.203;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.86;ReadPosRankSum=0.755;SOR=0.433 GT:AD:DP:GQ:PL 1/1:1,45:46:44:1126,44,0
CP000253.1 2623353 . T A 1219.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.688;DP=50;Dels=0.00;ExcessHet=3.0103;FS=3.100;HaplotypeScore=2.8937;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.40;ReadPosRankSum=0.243;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,49:50:53:1248,53,0
CP000253.1 2623368 . C T 1320.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.507;DP=54;Dels=0.00;ExcessHet=3.0103;FS=3.174;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.46;ReadPosRankSum=-0.064;SOR=0.402 GT:AD:DP:GQ:PL 1/1:1,53:54:62:1349,62,0
CP000253.1 2623725 . T G 1528.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.80;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1557,111,0
CP000253.1 2623728 . G A 1535.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.92;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1564,114,0
CP000253.1 2623731 . G C 1636.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.72;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1665,120,0
CP000253.1 2623764 . A C 1571.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.10;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1600,114,0
CP000253.1 2623767 . T A 1613.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1642,117,0
CP000253.1 2623770 . A T 1565.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3381;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.00;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1594,114,0
CP000253.1 2623824 . A G 1828.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1857,132,0
CP000253.1 2623827 . T C 1839.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:71:99:1868,132,0
CP000253.1 2623836 . G A 1883.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1912,135,0
CP000253.1 2623842 . G A 1861.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1890,135,0
CP000253.1 2623845 . T A 1753.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.57;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1782,126,0
CP000253.1 2623848 . A T 1810.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.63;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1839,129,0
CP000253.1 2623851 . T A 1779.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1808,126,0
CP000253.1 2623866 . T A 2166.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2195,154,0
CP000253.1 2623872 . T A 2273.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2302,163,0
CP000253.1 2623887 . C T 2281.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2310,163,0
CP000253.1 2623911 . A G 2326.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2355,166,0
CP000253.1 2623914 . G A 2399.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,95:96:99:2428,172,0
CP000253.1 2623929 . T A 2627.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1787;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2656,187,0
CP000253.1 2623950 . A G 2388.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2417,169,0
CP000253.1 2624019 . G A 2842.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2871,202,0
CP000253.1 2624031 . A C 2721.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0434;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2750,193,0
CP000253.1 2624067 . C T 2861.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2890,202,0
CP000253.1 2624079 . A G 2827.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2856,202,0
CP000253.1 2624106 . G A 2623.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2652,187,0
CP000253.1 2624139 . A G 2443.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,100:102:99:2472,175,0
CP000253.1 2624145 . A G 2564.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9563;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2593,184,0
CP000253.1 2624148 . G T 2471.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.921;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2461;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.22;ReadPosRankSum=-1.114;SOR=0.456 GT:AD:DP:GQ:PL 1/1:1,97:98:99:2500,175,0
CP000253.1 2624253 . G A 2811.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3952;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.03;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2840,196,0
CP000253.1 2624379 . C T 2723.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1996;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.54;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2752,193,0
CP000253.1 2624466 . T A 1879.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:80:99:1908,135,0
CP000253.1 2624553 . T G 2248.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.565;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.27;ReadPosRankSum=-0.738;SOR=0.315 GT:AD:DP:GQ:PL 1/1:1,100:102:99:2277,160,0
CP000253.1 2624679 . G A 3454.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1366;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,145:148:99:3483,247,0
CP000253.1 2624757 . A G 3719.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1694;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,165:165:99:3748,262,0
CP000253.1 2624922 . T A 3296.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,131:132:99:3325,235,0
CP000253.1 2625044 . G T 71.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.007;DP=48;Dels=0.00;ExcessHet=3.0103;FS=7.021;HaplotypeScore=2.7881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=1.50;ReadPosRankSum=-3.919;SOR=2.303 GT:AD:DP:GQ:PL 0/1:42,6:48:99:100,0,1050
CP000253.1 2625217 . T A 4967.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4275;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,212:212:99:4996,349,0
CP000253.1 2625845 . G A 2485.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4248;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2514,175,0
CP000253.1 2626174 . T A 638.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:48:667,48,0
CP000253.1 2626204 . A G 437.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:466,33,0
CP000253.1 2626267 . A C 1417.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1446,102,0
CP000253.1 2626301 . T C 1540.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1919;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.66;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1569,108,0
CP000253.1 2626369 . G A 2347.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2376,166,0
CP000253.1 2626456 . A C 2685.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1364;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.35;ReadPosRankSum=1.582;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,114:115:99:2714,190,0
CP000253.1 2626837 . T C 1256.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1285,90,0
CP000253.1 2626843 . T C 1291.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:93:1320,93,0
CP000253.1 2626849 . A G 1228.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1257,90,0
CP000253.1 2626864 . C T 1156.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:46:84:1185,84,0
CP000253.1 2626891 . T C 1442.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=1.047 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1471,105,0
CP000253.1 2626963 . T C 1472.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.818;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.14;ReadPosRankSum=-1.137;SOR=0.892 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1501,105,0
CP000253.1 2627068 . A T 1155.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1184,81,0
CP000253.1 2627173 . A G 838.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8899;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:63:867,63,0
CP000253.1 2627382 . A T 3134.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5247;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3163,223,0
CP000253.1 2627384 . A G 3210.76 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3239,229,0
CP000253.1 2627388 . A T 3420.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9389;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=1.082 GT:AD:DP:GQ:PL 1/1:0,137:138:99:3449,241,0
CP000253.1 2627691 . T C 2520.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,100:100:99:2549,178,0
CP000253.1 2627799 . C T 488.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:517,36,0
CP000253.1 2627936 . A G 302.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.53;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:331,24,0
CP000253.1 2627955 . A T 304.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.71;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:24:333,24,0
CP000253.1 2628180 . T C 1588.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4082;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1617,111,0
CP000253.1 2628635 . A G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2628647 . A G 8396.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9458;MLEAC=2;MLEAF=1.00;MQ=57.53;MQ0=0;QD=34.00;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,247:248:99:8425,659,0
CP000253.1 2628655 . G T 8873.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.050;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6786;MLEAC=2;MLEAF=1.00;MQ=57.11;MQ0=0;MQRankSum=-0.596;QD=27.32;ReadPosRankSum=1.493;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,247:248:99:8902,665,0
CP000253.1 2628656 . A G 8193.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.826;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9108;MLEAC=2;MLEAF=1.00;MQ=54.64;MQ0=0;MQRankSum=-0.569;QD=33.17;ReadPosRankSum=0.882;SOR=0.243 GT:AD:DP:GQ:PL 1/1:1,246:248:99:8222,623,0
CP000253.1 2629809 . G A 329.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=40.00;MQ0=0;QD=20.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:24:358,24,0
CP000253.1 2630064 . A G 2369.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.33;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2398,175,0
CP000253.1 2630065 . T C 2445.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.18;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2474,181,0
CP000253.1 2630070 . C A 2313.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.785;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.71;ReadPosRankSum=1.542;SOR=0.427 GT:AD:DP:GQ:PL 1/1:1,89:90:99:2342,169,0
CP000253.1 2630074 . G A 2499.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5594;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.59;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,94:95:99:2528,181,0
CP000253.1 2630085 . T C 2621.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.724;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8993;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.21;ReadPosRankSum=-1.667;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,103:104:99:2650,190,0
CP000253.1 2630099 . T G 2515.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=1.122 GT:AD:DP:GQ:PL 1/1:0,98:99:99:2544,181,0
CP000253.1 2630100 . T C 2558.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,100:101:99:2587,184,0
CP000253.1 2630106 . A T 2704.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2733,196,0
CP000253.1 2630120 . T G 2609.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.973 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2638,187,0
CP000253.1 2630121 . A C 2645.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.973 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2674,193,0
CP000253.1 2630142 . C A 3064.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0711;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.65;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3093,223,0
CP000253.1 2630151 . G A 3147.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.14;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3176,226,0
CP000253.1 2630160 . T A 3329.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6077;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.85;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3358,241,0
CP000253.1 2630172 . T C 3333.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.10;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3362,241,0
CP000253.1 2630175 . A G 3272.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2189;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.61;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3301,238,0
CP000253.1 2630184 . A G 3639.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0989;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.57;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,137:138:99:3668,268,0
CP000253.1 2630190 . T C 3692.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3102;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=27.56;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3721,265,0
CP000253.1 2630193 . A G 3443.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5215;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.09;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3472,253,0
CP000253.1 2630202 . T G 3495.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.69;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3524,253,0
CP000253.1 2630205 . C A 3505.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9822;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.76;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3534,259,0
CP000253.1 2630208 . A G 3478.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1155;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=26.35;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3507,253,0
CP000253.1 2630232 . T C 4105.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8340;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=25.99;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4134,295,0
CP000253.1 2630235 . C T 4164.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8960;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=26.19;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4193,298,0
CP000253.1 2630280 . C A 4369.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.721;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0602;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.83;ReadPosRankSum=1.694;SOR=0.427 GT:AD:DP:GQ:PL 1/1:1,175:178:99:4398,316,0
CP000253.1 2630292 . T C 4144.77 . AC=2;AF=1.00;AN=2;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7623;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,167:169:99:4173,292,0
CP000253.1 2630294 . G A 4078.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6564;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,166:167:99:4107,289,0
CP000253.1 2630295 . C T 4195.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7623;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.805 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4224,298,0
CP000253.1 2630301 . T A 4125.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0639;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.805 GT:AD:DP:GQ:PL 1/1:0,167:168:99:4154,292,0
CP000253.1 2630367 . A T 4889.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0325;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4918,349,0
CP000253.1 2630379 . C T 4449.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7880;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.97;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4478,319,0
CP000253.1 2630382 . T A 4319.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7256;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.50;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,163:164:99:4348,313,0
CP000253.1 2630391 . A T 4368.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2644;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,163:164:99:4397,316,0
CP000253.1 2630393 . C T 4332.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3192;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4361,316,0
CP000253.1 2630403 . A T 4144.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.236;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3547;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.27;ReadPosRankSum=0.423;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,163:165:99:4173,268,0
CP000253.1 2630405 . G T 4261.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5674;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4290,310,0
CP000253.1 2630412 . A T 4491.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9932;MLEAC=2;MLEAF=1.00;MQ=59.83;MQ0=0;QD=25.96;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4520,322,0
CP000253.1 2630502 . A G 4191.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,158:163:99:4220,304,0
CP000253.1 2630541 . T A 4376.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.876;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.70;ReadPosRankSum=0.263;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,157:162:99:4405,319,0
CP000253.1 2630556 . T A 4576.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.752;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4617;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.15;ReadPosRankSum=-0.991;SOR=0.486 GT:AD:DP:GQ:PL 1/1:1,174:176:99:4605,328,0
CP000253.1 2630562 . G T 4800.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.811;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.52;ReadPosRankSum=1.734;SOR=0.304 GT:AD:DP:GQ:PL 1/1:1,180:182:99:4829,349,0
CP000253.1 2630637 . A G 4918.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.748;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.8930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.30;ReadPosRankSum=-0.519;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,186:189:99:4947,355,0
CP000253.1 2630712 . C T 4747.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.7636;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,182:183:99:4776,337,0
CP000253.1 2630716 . A G 4583.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6420;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.61;ReadPosRankSum=1.384;SOR=0.405 GT:AD:DP:GQ:PL 1/1:1,178:182:99:4612,328,0
CP000253.1 2630841 . C A 4594.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.927;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.26;ReadPosRankSum=1.465;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,174:179:99:4623,328,0
CP000253.1 2631180 . G T 3031.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.827;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5483;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.06;ReadPosRankSum=1.114;SOR=0.675 GT:AD:DP:GQ:PL 1/1:1,125:126:99:3060,214,0
CP000253.1 2631189 . T C 2916.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0146;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2945,208,0
CP000253.1 2631195 . G A 3074.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2264;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.80;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3103,217,0
CP000253.1 2631212 . G A 2788.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.047;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.44;ReadPosRankSum=2.306;SOR=0.936 GT:AD:DP:GQ:PL 1/1:2,117:119:99:2817,157,0
CP000253.1 2631228 . T A 2611.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.104;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.32;ReadPosRankSum=0.758;SOR=0.569 GT:AD:DP:GQ:PL 1/1:3,109:112:99:2640,145,0
CP000253.1 2631252 . A T 2248.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.42;ReadPosRankSum=1.093;SOR=0.976 GT:AD:DP:GQ:PL 1/1:2,94:97:99:2277,121,0
CP000253.1 2631272 . C G 2028.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.963;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.80;ReadPosRankSum=-1.236;SOR=0.917 GT:AD:DP:GQ:PL 1/1:2,87:89:99:2057,103,0
CP000253.1 2631275 . T G 2002.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.822;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1939;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.76;ReadPosRankSum=-1.307;SOR=0.947 GT:AD:DP:GQ:PL 1/1:2,86:88:99:2031,107,0
CP000253.1 2631291 . A G 1714.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.574;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.49;ReadPosRankSum=-1.071;SOR=1.117 GT:AD:DP:GQ:PL 1/1:2,71:73:85:1743,85,0
CP000253.1 2631307 . T C 1656.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.040;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=-1.012;SOR=1.179 GT:AD:DP:GQ:PL 1/1:2,68:70:82:1685,82,0
CP000253.1 2631319 . G A 1511.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.286;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.62;ReadPosRankSum=-0.876;SOR=1.143 GT:AD:DP:GQ:PL 1/1:2,62:64:70:1540,70,0
CP000253.1 2631374 . C T 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 2631385 . C T 80.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:108,9,0
CP000253.1 2631414 . G A 50.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0
CP000253.1 2631416 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2631422 . G A 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 2631426 . T A 12.77 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=12.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:39,3,0
CP000253.1 2631436 . A G 69.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:97,9,0
CP000253.1 2631467 . A T 97.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:125,9,0
CP000253.1 2631489 . A G 126.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:154,12,0
CP000253.1 2631505 . A G 219.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:248,18,0
CP000253.1 2631508 . T A 259.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.87;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:21:288,21,0
CP000253.1 2631585 . T C 1922.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1933;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.08;SOR=1.451 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1951,141,0
CP000253.1 2631768 . C T 3863.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=1.082 GT:AD:DP:GQ:PL 1/1:0,161:162:99:3892,274,0
CP000253.1 2631876 . C T 4199.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8940;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.63;SOR=0.923 GT:AD:DP:GQ:PL 1/1:0,152:153:99:4228,304,0
CP000253.1 2632443 . A T 2253.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.04;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2282,160,0
CP000253.1 2632713 . T C 2448.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0804;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,98:100:99:2477,175,0
CP000253.1 2632734 . G A 2238.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2267,160,0
CP000253.1 2632737 . G T 2022.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2051,144,0
CP000253.1 2632746 . A G 1747.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=57.7679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1776,126,0
CP000253.1 2632750 . C G 1588.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=58.6620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1617,114,0
CP000253.1 2632755 . A T 1582.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=58.6620;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1611,114,0
CP000253.1 2632761 . A T 1572.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=58.5509;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1601,114,0
CP000253.1 2632771 . G A 1635.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.82;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1664,117,0
CP000253.1 2632784 . C A 1548.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.70;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1577,111,0
CP000253.1 2632785 . A G 1540.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1569,111,0
CP000253.1 2632791 . A C 1582.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.29;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1611,114,0
CP000253.1 2632875 . G A 708.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.82;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,23:23:54:737,54,0
CP000253.1 2632896 . T C 983.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.81;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,33:33:75:1012,75,0
CP000253.1 2632913 . C T 1643.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.35;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,56:57:99:1672,123,0
CP000253.1 2632916 . G A 1722.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.22;SOR=1.823 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1751,129,0
CP000253.1 2632919 . A G 1797.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.96;SOR=1.812 GT:AD:DP:GQ:PL 1/1:0,60:62:99:1826,132,0
CP000253.1 2632925 . T A 2191.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.74;SOR=1.439 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2220,160,0
CP000253.1 2632930 . C T 2385.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.74;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2414,175,0
CP000253.1 2633000 . C T 3181.78 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8413;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=1.099 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3210,229,0
CP000253.1 2633051 . A T 3438.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.848;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3911;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.74;ReadPosRankSum=0.474;SOR=0.810 GT:AD:DP:GQ:PL 1/1:1,138:139:99:3467,244,0
CP000253.1 2633108 . G A 3721.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3750,268,0
CP000253.1 2633110 . T C 3773.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,154:155:99:3802,271,0
CP000253.1 2633116 . G C 3636.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6109;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,156:157:99:3665,259,0
CP000253.1 2633120 . G A 3886.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.801;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.6328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.41;ReadPosRankSum=0.678;SOR=0.360 GT:AD:DP:GQ:PL 1/1:1,165:167:99:3915,277,0
CP000253.1 2633547 . A C 479.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.22;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:36:508,36,0
CP000253.1 2633573 . T A 215.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:18:244,18,0
CP000253.1 2633594 . C A 171.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:15:200,15,0
CP000253.1 2633641 . A G 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 2633732 . C T 135.03 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:163,12,0
CP000253.1 2633888 . A C 1107.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.725;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8831;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.76;ReadPosRankSum=1.251;SOR=1.383 GT:AD:DP:GQ:PL 1/1:1,42:44:81:1136,81,0
CP000253.1 2633917 . A T 1190.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1219,87,0
CP000253.1 2633987 . G A 2732.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0314;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=1.115 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2761,196,0
CP000253.1 2633995 . C A 2644.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0676;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2673,193,0
CP000253.1 2634172 . T C 4116.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2428;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,164:165:99:4145,298,0
CP000253.1 2634316 . C T 4907.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.3199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.43;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,193:194:99:4936,349,0
CP000253.1 2634955 . T C 2559.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2588,184,0
CP000253.1 2635024 . T C 2280.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2309,163,0
CP000253.1 2635153 . T C 2417.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7397;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,102:104:99:2446,172,0
CP000253.1 2635186 . C T 2248.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2277,160,0
CP000253.1 2635193 . C T 2229.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8881;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.24;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2258,160,0
CP000253.1 2635201 . T C 2271.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.69;ReadPosRankSum=-0.546;SOR=0.620 GT:AD:DP:GQ:PL 1/1:1,91:93:99:2300,163,0
CP000253.1 2635253 . T C 2722.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2751,193,0
CP000253.1 2635276 . G T 2997.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3026,211,0
CP000253.1 2635351 . T C 3065.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3094,217,0
CP000253.1 2635729 . C T 4035.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5893;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4064,286,0
CP000253.1 2635864 . C T 4605.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,193:195:99:4634,322,0
CP000253.1 2635868 . T C 4757.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.863;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1673;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.91;ReadPosRankSum=1.437;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,198:199:99:4786,334,0
CP000253.1 2636045 . G A 2817.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1918;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.189 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2846,202,0
CP000253.1 2636095 . T C 2118.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2792;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2147,150,0
CP000253.1 2636161 . G A 670.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:51:699,51,0
CP000253.1 2636311 . T C 1629.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0120;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1658,120,0
CP000253.1 2637079 . C T 1796.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7657;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1825,129,0
CP000253.1 2637199 . A C 1915.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1944,138,0
CP000253.1 2637202 . A T 1724.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1753,123,0
CP000253.1 2637906 . T C 3465.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=1.144 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3494,250,0
CP000253.1 2638540 . T C 300.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:329,24,0
CP000253.1 2638719 . G A 907.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:66:936,66,0
CP000253.1 2638793 . T A 3158.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8455;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.77;SOR=1.278 GT:AD:DP:GQ:PL 1/1:0,118:119:99:3187,226,0
CP000253.1 2638872 . G A 5855.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.1986;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=1.093 GT:AD:DP:GQ:PL 1/1:0,222:223:99:5884,415,0
CP000253.1 2638952 . A G 6293.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3453;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;QD=25.90;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,243:247:99:6322,454,0
CP000253.1 2639216 . T G 5695.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.910;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5473;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.25;ReadPosRankSum=1.724;SOR=0.787 GT:AD:DP:GQ:PL 1/1:1,216:217:99:5724,409,0
CP000253.1 2639452 . A G 5464.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.918;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7754;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.40;ReadPosRankSum=-1.323;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,223:225:99:5493,385,0
CP000253.1 2639453 . T C 5476.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,224:224:99:5505,382,0
CP000253.1 2639474 . G A 5427.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0029;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,226:227:99:5456,379,0
CP000253.1 2639495 . T C 5204.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7755;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,222:224:99:5233,364,0
CP000253.1 2639540 . T C 4322.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,179:182:99:4351,304,0
CP000253.1 2639552 . G T 4217.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1940;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.10;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4246,295,0
CP000253.1 2639557 . A T 3710.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.795;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.10;ReadPosRankSum=-0.686;SOR=0.287 GT:AD:DP:GQ:PL 1/1:1,153:154:99:3739,233,0
CP000253.1 2639558 . G T 3700.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.967;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.35;ReadPosRankSum=1.539;SOR=0.460 GT:AD:DP:GQ:PL 1/1:1,151:153:99:3729,259,0
CP000253.1 2639699 . A G 2304.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.11;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2333,169,0
CP000253.1 2639744 . G A 1790.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7534;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1819,129,0
CP000253.1 2639771 . T C 1346.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9395;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1375,99,0
CP000253.1 2639855 . C T 2472.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4387;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.49;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2501,178,0
CP000253.1 2639867 . C A 2538.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0728;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2567,184,0
CP000253.1 2639885 . T A 2529.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.355;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.64;ReadPosRankSum=0.634;SOR=0.126 GT:AD:DP:GQ:PL 1/1:2,105:108:99:2558,187,0
CP000253.1 2639924 . A T 2862.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.823;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7501;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.27;ReadPosRankSum=0.846;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,122:124:99:2891,202,0
CP000253.1 2640080 . T C 3525.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9967;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=24.66;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3554,253,0
CP000253.1 2640101 . G A 3607.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8021;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.41;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3636,259,0
CP000253.1 2640104 . T A 3591.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9866;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.29;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3620,256,0
CP000253.1 2640113 . T C 3528.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8960;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.21;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3557,256,0
CP000253.1 2640119 . A G 3773.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.927;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4502;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=26.03;ReadPosRankSum=1.662;SOR=0.357 GT:AD:DP:GQ:PL 1/1:1,144:146:99:3802,268,0
CP000253.1 2640146 . G A 3839.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2646;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,144:146:99:3868,274,0
CP000253.1 2640149 . T A 3717.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4324;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.37;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,141:142:99:3746,265,0
CP000253.1 2640155 . T C 3562.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6136;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.82;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3591,256,0
CP000253.1 2640170 . T C 2345.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.26;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2374,172,0
CP000253.1 2640172 . A G 2256.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.57;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2285,166,0
CP000253.1 2640173 . A T 2221.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.12;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2250,163,0
CP000253.1 2640176 . G A 2265.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.05;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:79:99:2294,166,0
CP000253.1 2640179 . A G 2170.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2199,160,0
CP000253.1 2640181 . G A 2214.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.39;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:79:99:2243,163,0
CP000253.1 2640185 . T A 2273.77 . AC=2;AF=1.00;AN=2;DP=79;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.78;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2302,166,0
CP000253.1 2640191 . A T 2270.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.885;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.36;ReadPosRankSum=0.480;SOR=0.540 GT:AD:DP:GQ:PL 1/1:1,82:83:99:2299,166,0
CP000253.1 2640193 . C T 2370.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.22;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2399,172,0
CP000253.1 2640215 . T C 4242.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.35;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4271,307,0
CP000253.1 2640221 . T C 4220.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.22;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4249,304,0
CP000253.1 2640224 . C T 4127.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.875;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.056;QD=25.96;ReadPosRankSum=0.470;SOR=0.733 GT:AD:DP:GQ:PL 1/1:1,158:160:99:4156,298,0
CP000253.1 2640233 . G A 4222.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3329;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.73;SOR=1.074 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4251,304,0
CP000253.1 2640236 . A T 3979.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5721;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.18;SOR=1.164 GT:AD:DP:GQ:PL 1/1:0,152:153:99:4008,286,0
CP000253.1 2640242 . T A 4064.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6747;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.92;SOR=1.149 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4093,292,0
CP000253.1 2640247 . A G 3972.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5721;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.66;SOR=1.156 GT:AD:DP:GQ:PL 1/1:0,149:149:99:4001,286,0
CP000253.1 2640248 . T C 3892.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5721;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.95;SOR=1.134 GT:AD:DP:GQ:PL 1/1:0,150:150:99:3921,280,0
CP000253.1 2640263 . T G 4184.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0854;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=24.62;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4213,301,0
CP000253.1 2640269 . T C 4172.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7794;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4201,298,0
CP000253.1 2640278 . T C 3965.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,166:166:99:3994,283,0
CP000253.1 2640371 . T C 5559.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.1661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,228:231:99:5588,400,0
CP000253.1 2640386 . T C 5646.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.784;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.7413;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=1.532;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,224:225:99:5675,403,0
CP000253.1 2640389 . T A 5568.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=39.4347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,226:226:99:5597,397,0
CP000253.1 2640436 . G A 5990.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.884;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.3456;MLEAC=2;MLEAF=1.00;MQ=59.88;MQ0=0;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.666;SOR=0.343 GT:AD:DP:GQ:PL 1/1:1,241:243:99:6019,421,0
CP000253.1 2640455 . G A 6190.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2047;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,246:248:99:6219,436,0
CP000253.1 2640605 . G A 5545.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3518;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,224:224:99:5574,391,0
CP000253.1 2640791 . A T 932.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:69:961,69,0
CP000253.1 2640830 . A T 946.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.30;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:69:975,69,0
CP000253.1 2640836 . A C 1027.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:40:75:1056,75,0
CP000253.1 2640842 . C T 1105.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1134,81,0
CP000253.1 2640854 . A G 1223.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.60;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:46:90:1252,90,0
CP000253.1 2640859 . T C 1234.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.44;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:90:1263,90,0
CP000253.1 2640860 . A T 1243.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.64;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:90:1272,90,0
CP000253.1 2641390 . C T 923.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:66:952,66,0
CP000253.1 2641405 . T C 578.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:607,42,0
CP000253.1 2641453 . C T 579.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7172;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,26:26:42:608,42,0
CP000253.1 2641762 . T C 428.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:457,33,0
CP000253.1 2641930 . C T 253.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:282,21,0
CP000253.1 2641939 . C T 248.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:277,21,0
CP000253.1 2642014 . A T 227.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:256,18,0
CP000253.1 2642232 . A G 2481.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.64;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2510,175,0
CP000253.1 2642307 . G A 3982.77 . AC=2;AF=1.00;AN=2;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1991;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,170:170:99:4011,277,0
CP000253.1 2642328 . G A 4444.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4473,307,0
CP000253.1 2642427 . T G 4443.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.757;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.33;ReadPosRankSum=0.307;SOR=0.767 GT:AD:DP:GQ:PL 1/1:4,195:199:99:4472,308,0
CP000253.1 2642760 . T A 3380.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.05;SOR=1.082 GT:AD:DP:GQ:PL 1/1:0,125:126:99:3409,244,0
CP000253.1 2642778 . A G 3411.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.65;SOR=1.092 GT:AD:DP:GQ:PL 1/1:0,128:131:99:3440,247,0
CP000253.1 2642787 . T C 3453.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2479;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3482,250,0
CP000253.1 2642811 . T C 3700.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.485;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8911;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.35;ReadPosRankSum=-1.053;SOR=0.895 GT:AD:DP:GQ:PL 1/1:2,150:153:99:3729,226,0
CP000253.1 2642907 . A T 4669.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.961;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.4761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.83;ReadPosRankSum=1.520;SOR=0.372 GT:AD:DP:GQ:PL 1/1:1,195:197:99:4698,325,0
CP000253.1 2643132 . C A 2664.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2693,190,0
CP000253.1 2643150 . T C 2452.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4093;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2481,178,0
CP000253.1 2643186 . C T 2646.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8157;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.01;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2675,190,0
CP000253.1 2643273 . G A 3169.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.86;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3198,229,0
CP000253.1 2643489 . C T 3840.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.6847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,164:165:99:3869,268,0
CP000253.1 2643842 . T C 806.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7041;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:60:835,60,0
CP000253.1 2644138 . A T 1860.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.9822;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1889,132,0
CP000253.1 2644157 . G A 2089.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2229;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2118,147,0
CP000253.1 2644158 . G A 2122.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3908;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2151,150,0
CP000253.1 2644176 . C T 2320.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1397;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,96:97:99:2349,166,0
CP000253.1 2644248 . G A 2759.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5685;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2788,196,0
CP000253.1 2644362 . A G 2944.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:129:99:2973,205,0
CP000253.1 2644387 . G T 3101.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,132:133:99:3130,217,0
CP000253.1 2644395 . T C 2967.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7267;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,127:127:99:2996,208,0
CP000253.1 2644396 . C T 2954.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.414;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7267;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.08;ReadPosRankSum=1.733;SOR=0.256 GT:AD:DP:GQ:PL 1/1:1,127:128:99:2983,173,0
CP000253.1 2644454 . A C 2714.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.997;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.01;ReadPosRankSum=0.617;SOR=0.259 GT:AD:DP:GQ:PL 1/1:1,117:118:99:2743,190,0
CP000253.1 2644568 . C A 1057.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.04;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1086,75,0
CP000253.1 2644800 . G A 1710.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,73:74:99:1739,120,0
CP000253.1 2644803 . C T 1725.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1754,120,0
CP000253.1 2644836 . C T 1813.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1842,126,0
CP000253.1 2644839 . G A 1861.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.27;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1890,129,0
CP000253.1 2644896 . T C 1678.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.69;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1707,117,0
CP000253.1 2645039 . G A 1554.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.81;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1583,114,0
CP000253.1 2645133 . T G 3536.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3565,250,0
CP000253.1 2645388 . G A 6263.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.923;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4621;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.36;ReadPosRankSum=1.249;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,246:248:99:6292,442,0
CP000253.1 2645472 . G A 6062.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.941;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.55;ReadPosRankSum=1.017;SOR=0.545 GT:AD:DP:GQ:PL 1/1:1,246:247:99:6091,427,0
CP000253.1 2645711 . A G 2322.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.692;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2958;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.52;ReadPosRankSum=-0.934;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,90:91:99:2351,169,0
CP000253.1 2645973 . A C 6460.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.298;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.6464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.95;ReadPosRankSum=-2.279;SOR=0.787 GT:AD:DP:GQ:PL 1/1:6,243:249:99:6489,354,0
CP000253.1 2646448 . C T 5904.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5933,424,0
CP000253.1 2646521 . C T 4839.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.805 GT:AD:DP:GQ:PL 1/1:0,186:188:99:4868,349,0
CP000253.1 2646545 . G A 4952.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.77;ReadPosRankSum=1.696;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,184:187:99:4981,361,0
CP000253.1 2646602 . T C 4522.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3524;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4551,322,0
CP000253.1 2646737 . A G 4927.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,200:201:99:4956,355,0
CP000253.1 2646814 . T C 5364.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.057;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9456;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.30;ReadPosRankSum=0.199;SOR=0.754 GT:AD:DP:GQ:PL 1/1:2,202:205:99:5393,347,0
CP000253.1 2646995 . T C 5866.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4836;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,236:238:99:5895,415,0
CP000253.1 2647670 . A G 2955.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.88;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2984,214,0
CP000253.1 2647710 . G A 2258.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.21;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2287,166,0
CP000253.1 2647739 . C T 1611.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1329;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.32;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1640,117,0
CP000253.1 2647783 . C T 997.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.72;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:75:1026,75,0
CP000253.1 2647849 . T C 519.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.36;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,19:20:42:548,42,0
CP000253.1 2648328 . A G 4756.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.058;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1732;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.52;ReadPosRankSum=-0.234;SOR=1.109 GT:AD:DP:GQ:PL 1/1:2,192:194:99:4785,301,0
CP000253.1 2648885 . A C 4598.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.672;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.41;ReadPosRankSum=1.887;SOR=1.009 GT:AD:DP:GQ:PL 1/1:2,179:182:99:4627,325,0
CP000253.1 2649883 . T G 1755.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.01;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1784,126,0
CP000253.1 2649927 . G A 1762.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.98;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1791,129,0
CP000253.1 2649966 . A G 1736.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.57;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1765,129,0
CP000253.1 2650236 . T C 2893.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0024;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,128:128:99:2922,205,0
CP000253.1 2650509 . T C 1431.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1460,102,0
CP000253.1 2650511 . A T 1387.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1416,99,0
CP000253.1 2650629 . A C 1686.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.7965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1715,120,0
CP000253.1 2650666 . T C 1506.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.816;DP=63;Dels=0.00;ExcessHet=3.0103;FS=3.080;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.92;ReadPosRankSum=0.908;SOR=0.324 GT:AD:DP:GQ:PL 1/1:1,62:63:99:1535,109,0
CP000253.1 2650692 . A T 1620.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1649,114,0
CP000253.1 2650695 . C A 1609.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1638,114,0
CP000253.1 2650723 . G T 1940.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1969,135,0
CP000253.1 2650800 . A G 2514.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0595;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2543,178,0
CP000253.1 2650821 . C T 2553.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.80;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2582,181,0
CP000253.1 2650851 . A G 2464.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.50;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2493,181,0
CP000253.1 2651049 . C T 1745.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1774,129,0
CP000253.1 2651607 . G A 3883.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8490;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,156:156:99:3912,274,0
CP000253.1 2652340 . T G 675.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:704,48,0
CP000253.1 2652607 . T C 2900.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9063;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,127:127:99:2929,205,0
CP000253.1 2653457 . A G 3162.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5211;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3191,229,0
CP000253.1 2653589 . C T 3835.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.303;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6383;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.97;ReadPosRankSum=0.434;SOR=0.398 GT:AD:DP:GQ:PL 1/1:3,164:170:99:3864,203,0
CP000253.1 2653667 . T C 4856.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.852;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6260;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.78;ReadPosRankSum=1.690;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,195:196:99:4885,349,0
CP000253.1 2653952 . G A 4919.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,190:191:99:4948,352,0
CP000253.1 2654168 . G A 5134.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.7511;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.17;ReadPosRankSum=1.232;SOR=0.598 GT:AD:DP:GQ:PL 1/1:1,203:206:99:5163,367,0
CP000253.1 2654224 . C T 5198.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2427;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,205:206:99:5227,370,0
CP000253.1 2655391 . G A 1392.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.86;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1421,102,0
CP000253.1 2655529 . T G 2673.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2702,190,0
CP000253.1 2655565 . T A 2822.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2851,196,0
CP000253.1 2655710 . T G 2824.77 . AC=2;AF=1.00;AN=2;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,116:116:99:2853,199,0
CP000253.1 2655943 . G A 574.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.53;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:45:603,45,0
CP000253.1 2656160 . G A 137.03 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.41;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:12:165,12,0
CP000253.1 2656280 . A G 182.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:8:15:211,15,0
CP000253.1 2656922 . A G 1401.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1430,99,0
CP000253.1 2657336 . C T 324.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:353,27,0
CP000253.1 2657491 . C A 393.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:422,30,0
CP000253.1 2657492 . T C 384.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:30:413,30,0
CP000253.1 2657596 . A G 651.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.47;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:48:680,48,0
CP000253.1 2658467 . G A 892.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.90;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,32:32:66:921,66,0
CP000253.1 2658623 . T G 1019.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.965;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3859;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.72;ReadPosRankSum=0.121;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,42:43:72:1048,72,0
CP000253.1 2659352 . A G 1312.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,54:54:96:1341,96,0
CP000253.1 2659447 . T C 402.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:30:431,30,0
CP000253.1 2659560 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2659740 . A T 102.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:130,9,0
CP000253.1 2659757 . A C 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2659774 . A C 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2659788 . A T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2659816 . G T 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2659825 . A G 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2659835 . T A 239.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:268,18,0
CP000253.1 2659842 . A C 188.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.89;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:217,15,0
CP000253.1 2659900 . T C 101.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:129,9,0
CP000253.1 2660011 . T C 45.74 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:6:73,6,0
CP000253.1 2660260 . T C 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2660437 . T C 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 2660446 . T C 53.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:81,6,0
CP000253.1 2660495 . C T 187.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:15:216,15,0
CP000253.1 2660586 . A G 299.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.25;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:12:24:328,24,0
CP000253.1 2660762 . T C 2143.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8078;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=1.165 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2172,154,0
CP000253.1 2661055 . T C 3640.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.931;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.94;ReadPosRankSum=1.377;SOR=0.424 GT:AD:DP:GQ:PL 1/1:1,145:147:99:3669,259,0
CP000253.1 2661167 . G A 2853.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5518;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2882,199,0
CP000253.1 2661796 . A C 261.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.645;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.18;ReadPosRankSum=-1.645;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,9:10:21:290,21,0
CP000253.1 2661807 . A G 294.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:24:323,24,0
CP000253.1 2661873 . G A 213.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.73;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:242,18,0
CP000253.1 2661887 . T A 217.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.23;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:246,18,0
CP000253.1 2661891 . G A 218.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.35;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:247,18,0
CP000253.1 2661905 . G A 262.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.90;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:21:291,21,0
CP000253.1 2661919 . T C 392.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:30:421,30,0
CP000253.1 2661921 . C A 391.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:30:420,30,0
CP000253.1 2661927 . C T 398.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:30:427,30,0
CP000253.1 2661968 . C A 521.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:39:550,39,0
CP000253.1 2661991 . T C 568.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,22:22:42:597,42,0
CP000253.1 2661992 . A C 559.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:42:588,42,0
CP000253.1 2662080 . T C 2168.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1023;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.83;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,95:96:99:2197,154,0
CP000253.1 2662194 . C T 3833.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6291;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,166:166:99:3862,265,0
CP000253.1 2662251 . C T 3423.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3452,241,0
CP000253.1 2662254 . T C 3363.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3401;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,144:144:99:3392,238,0
CP000253.1 2662659 . G A 3982.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1077;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,163:164:99:4011,283,0
CP000253.1 2662683 . T C 3760.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6996;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3789,268,0
CP000253.1 2663371 . G A 357.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:386,27,0
CP000253.1 2663620 . G A 1847.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1876,132,0
CP000253.1 2663685 . T C 2321.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:94:99:2350,163,0
CP000253.1 2663718 . T G 2659.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7749;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2688,187,0
CP000253.1 2664107 . G A 2541.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2570,178,0
CP000253.1 2664791 . G T 2447.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2476,172,0
CP000253.1 2664809 . T C 2249.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2278,157,0
CP000253.1 2664869 . T G 1107.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:81:1136,81,0
CP000253.1 2664870 . A G 898.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:66:927,66,0
CP000253.1 2664887 . C T 540.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:42:569,42,0
CP000253.1 2664889 . A T 518.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:547,39,0
CP000253.1 2664894 . A G 524.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.85;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:39:553,39,0
CP000253.1 2664901 . T A 522.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.816;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.76;ReadPosRankSum=0.714;SOR=0.352 GT:AD:DP:GQ:PL 1/1:1,21:22:39:551,39,0
CP000253.1 2664992 . A C 1325.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.804;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3362;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.10;ReadPosRankSum=1.042;SOR=0.458 GT:AD:DP:GQ:PL 1/1:1,54:55:96:1354,96,0
CP000253.1 2665052 . C T 2104.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2133,150,0
CP000253.1 2665258 . G C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2665276 . C A 38.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0
CP000253.1 2665277 . G A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 2665334 . C T 1501.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.45;SOR=1.314 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1530,111,0
CP000253.1 2665376 . T A 1863.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2513;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=1.195 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1892,138,0
CP000253.1 2665417 . T C 2113.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6625;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2142,153,0
CP000253.1 2665583 . G A 2975.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,114:115:99:3004,217,0
CP000253.1 2666340 . A C 3901.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9413;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.805 GT:AD:DP:GQ:PL 1/1:0,167:168:99:3930,271,0
CP000253.1 2666798 . G T 1832.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.935;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.12;ReadPosRankSum=-0.570;SOR=0.436 GT:AD:DP:GQ:PL 1/1:1,75:76:99:1861,129,0
CP000253.1 2666803 . G A 1834.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5369;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.46;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1863,129,0
CP000253.1 2666940 . C A 1169.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4095;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:84:1198,84,0
CP000253.1 2666944 . G T 1269.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.911;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2601;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=0.067;SOR=0.537 GT:AD:DP:GQ:PL 1/1:1,51:52:90:1298,90,0
CP000253.1 2667016 . G A 2072.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2101,144,0
CP000253.1 2667534 . G A 1384.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5226;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1413,99,0
CP000253.1 2667695 . A G 5651.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.901;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.36;ReadPosRankSum=0.388;SOR=0.611 GT:AD:DP:GQ:PL 1/1:1,231:235:99:5680,397,0
CP000253.1 2668091 . T C 3978.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4532;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.50;SOR=1.045 GT:AD:DP:GQ:PL 1/1:0,156:156:99:4007,289,0
CP000253.1 2668232 . G A 2625.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.069;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6281;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=28.23;ReadPosRankSum=1.733;SOR=1.299 GT:AD:DP:GQ:PL 1/1:1,92:93:99:2654,190,0
CP000253.1 2668312 . A T 2562.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.26;ReadPosRankSum=0.775;SOR=0.290 GT:AD:DP:GQ:PL 1/1:1,93:94:99:2591,187,0
CP000253.1 2668321 . T A 2483.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.3000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,94:96:99:2512,178,0
CP000253.1 2668338 . G T 2757.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8143;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.02;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2786,202,0
CP000253.1 2668569 . T A 3349.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.859;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.27;ReadPosRankSum=0.389;SOR=0.267 GT:AD:DP:GQ:PL 1/1:1,137:138:99:3378,235,0
CP000253.1 2668584 . G A 3233.06 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4264;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3260,226,0
CP000253.1 2668647 . A C 2438.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,98:101:99:2467,175,0
CP000253.1 2668965 . C A 2995.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3543;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3024,211,0
CP000253.1 2668972 . A G 2966.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:124:99:2995,208,0
CP000253.1 2668995 . T C 2982.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7034;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3011,208,0
CP000253.1 2669107 . C T 2289.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2318,160,0
CP000253.1 2669132 . A G 1688.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1717,120,0
CP000253.1 2669148 . G A 1683.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6070;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1712,120,0
CP000253.1 2669341 . C T 1563.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1592,111,0
CP000253.1 2669468 . G A 2268.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1457;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.93;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:92:99:2297,163,0
CP000253.1 2669848 . C T 5615.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,235:235:99:5644,394,0
CP000253.1 2669863 . C T 5584.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,232:234:99:5613,391,0
CP000253.1 2670100 . T C 3738.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6071;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.09;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3767,271,0
CP000253.1 2670208 . T C 5177.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.726;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5002;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.01;ReadPosRankSum=0.494;SOR=0.712 GT:AD:DP:GQ:PL 1/1:1,206:209:99:5206,376,0
CP000253.1 2670274 . A G 6529.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.1475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6558,476,0
CP000253.1 2670281 . C T 6516.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.518;DP=250;Dels=0.00;ExcessHet=3.0103;FS=3.102;HaplotypeScore=33.5497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.49;ReadPosRankSum=1.358;SOR=0.223 GT:AD:DP:GQ:PL 1/1:2,244:250:99:6545,470,0
CP000253.1 2670454 . T G 6488.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.755;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.06;ReadPosRankSum=-1.322;SOR=0.322 GT:AD:DP:GQ:PL 1/1:1,248:249:99:6517,475,0
CP000253.1 2670486 . C T 5770.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4367;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.979 GT:AD:DP:GQ:PL 1/1:0,220:221:99:5799,415,0
CP000253.1 2670575 . T G 4457.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.118;DP=187;Dels=0.00;ExcessHet=3.0103;FS=3.672;HaplotypeScore=20.7113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.97;ReadPosRankSum=0.971;SOR=0.583 GT:AD:DP:GQ:PL 1/1:2,184:187:99:4486,284,0
CP000253.1 2670604 . A T 2535.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.960;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0834;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.61;ReadPosRankSum=0.438;SOR=0.697 GT:AD:DP:GQ:PL 1/1:1,98:99:99:2564,181,0
CP000253.1 2670607 . C T 2455.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.384;DP=98;Dels=0.01;ExcessHet=3.0103;FS=3.740;HaplotypeScore=7.2947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.32;ReadPosRankSum=0.447;SOR=0.781 GT:AD:DP:GQ:PL 1/1:1,96:97:99:2484,143,0
CP000253.1 2670608 . A G 2481.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.59;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2510,178,0
CP000253.1 2670612 . G T 2344.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.066;DP=98;Dels=0.00;ExcessHet=3.0103;FS=3.793;HaplotypeScore=13.2909;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.93;ReadPosRankSum=0.939;SOR=0.739 GT:AD:DP:GQ:PL 1/1:3,95:98:99:2373,134,0
CP000253.1 2670613 . A G 2444.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.964;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2909;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.20;ReadPosRankSum=0.357;SOR=0.781 GT:AD:DP:GQ:PL 1/1:1,96:98:99:2473,175,0
CP000253.1 2670619 . A T 2454.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9341;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2483,175,0
CP000253.1 2670622 . C T 2452.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.700;DP=98;Dels=0.00;ExcessHet=3.0103;FS=3.649;HaplotypeScore=9.0406;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.03;ReadPosRankSum=-0.142;SOR=0.738 GT:AD:DP:GQ:PL 1/1:1,97:98:99:2481,151,0
CP000253.1 2670624 . T C 2417.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.2793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.93;ReadPosRankSum=-0.268;SOR=0.781 GT:AD:DP:GQ:PL 1/1:1,96:98:99:2446,172,0
CP000253.1 2670949 . C T 3233.06 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3263,226,0
CP000253.1 2671045 . A G 3931.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.3112;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.47;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,175:176:99:3960,274,0
CP000253.1 2671550 . C T 2428.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5356;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2457,169,0
CP000253.1 2671622 . C A 2407.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1807;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,97:98:99:2436,172,0
CP000253.1 2671829 . G A 3987.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1601;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.40;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4016,277,0
CP000253.1 2672068 . C T 4394.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1346;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.25;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,189:190:99:4423,310,0
CP000253.1 2672107 . T G 4165.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.753;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6852;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.27;ReadPosRankSum=-0.436;SOR=0.232 GT:AD:DP:GQ:PL 1/1:1,178:179:99:4194,289,0
CP000253.1 2672173 . A T 3836.77 . AC=2;AF=1.00;AN=2;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8198;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,160:160:99:3865,268,0
CP000253.1 2672191 . C T 3753.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3782,265,0
CP000253.1 2672326 . C T 4064.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0014;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4093,286,0
CP000253.1 2672371 . G A 3716.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3745,259,0
CP000253.1 2672599 . A G 1845.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5285;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1874,132,0
CP000253.1 2672625 . T G 1811.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.87;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1840,132,0
CP000253.1 2672730 . A G 1204.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.02;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,43:43:90:1233,90,0
CP000253.1 2672745 . A C 1135.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:84:1164,84,0
CP000253.1 2672787 . T G 1534.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1563,108,0
CP000253.1 2672811 . A G 1780.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.693;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3589;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.39;ReadPosRankSum=0.784;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,72:73:99:1809,129,0
CP000253.1 2673000 . T C 2270.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8633;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.947 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2299,163,0
CP000253.1 2673004 . A T 2365.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2394,166,0
CP000253.1 2673394 . A G 2961.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3894;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2990,214,0
CP000253.1 2673433 . A G 3785.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7573;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3814,268,0
CP000253.1 2673820 . T C 573.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.07;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:602,42,0
CP000253.1 2673866 . G A 364.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:393,27,0
CP000253.1 2673949 . A T 988.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:69:1017,69,0
CP000253.1 2673960 . C A 1108.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:78:1137,78,0
CP000253.1 2673968 . T G 1151.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1180,81,0
CP000253.1 2673997 . C A 1335.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,57:57:93:1364,93,0
CP000253.1 2674049 . G T 1095.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:78:1124,78,0
CP000253.1 2674069 . T C 1065.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1094,75,0
CP000253.1 2674085 . A T 1054.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,43:43:75:1083,75,0
CP000253.1 2674098 . A T 962.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:69:991,69,0
CP000253.1 2674117 . T G 813.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:60:842,60,0
CP000253.1 2674239 . C T 245.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.73;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:21:274,21,0
CP000253.1 2674266 . T C 248.80 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.10;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:21:277,21,0
CP000253.1 2674479 . A G 1786.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5679;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1815,129,0
CP000253.1 2674600 . A G 3585.77 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2473;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.76;SOR=1.153 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3614,262,0
CP000253.1 2674607 . C G 3434.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.872;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.22;ReadPosRankSum=-0.993;SOR=0.962 GT:AD:DP:GQ:PL 1/1:1,130:131:99:3463,250,0
CP000253.1 2674631 . A T 4934.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8212;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,198:198:99:4963,349,0
CP000253.1 2674650 . G T 5317.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.749;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6728;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.28;ReadPosRankSum=0.816;SOR=0.556 GT:AD:DP:GQ:PL 1/1:1,218:221:99:5346,376,0
CP000253.1 2674661 . A G 4143.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.577;DP=250;Dels=0.00;ExcessHet=3.0103;FS=1.656;HaplotypeScore=13.9944;MLEAC=1;MLEAF=0.500;MQ=55.96;MQ0=0;MQRankSum=15.749;QD=16.64;ReadPosRankSum=12.100;SOR=0.795 GT:AD:DP:GQ:PL 0/1:79,170:250:99:4172,0,1306
CP000253.1 2674670 . T A 4007.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.595;DP=250;Dels=0.00;ExcessHet=3.0103;FS=1.039;HaplotypeScore=15.0582;MLEAC=1;MLEAF=0.500;MQ=55.96;MQ0=0;MQRankSum=15.604;QD=16.10;ReadPosRankSum=10.371;SOR=0.778 GT:AD:DP:GQ:PL 0/1:80,169:250:99:4036,0,1338
CP000253.1 2674714 . C T 6135.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,228:230:99:6164,439,0
CP000253.1 2674730 . T C 6280.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4903;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,245:245:99:6309,448,0
CP000253.1 2674743 . T C 6336.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.865;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.45;ReadPosRankSum=-0.821;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6365,454,0
CP000253.1 2674748 . C A 6402.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2689;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6431,457,0
CP000253.1 2674775 . T G 6370.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.193;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.48;ReadPosRankSum=-1.105;SOR=0.688 GT:AD:DP:GQ:PL 1/1:3,247:250:99:6399,457,0
CP000253.1 2674813 . A T 5751.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.971;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.23;ReadPosRankSum=-1.444;SOR=0.338 GT:AD:DP:GQ:PL 1/1:1,227:228:99:5780,406,0
CP000253.1 2674819 . G A 5714.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1693;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.21;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5743,406,0
CP000253.1 2674821 . C T 5697.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3318;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.14;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5726,403,0
CP000253.1 2674825 . A T 5636.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.86;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5665,403,0
CP000253.1 2674826 . G T 5521.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5550,394,0
CP000253.1 2674828 . C T 5658.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.96;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5687,403,0
CP000253.1 2674831 . A G 5417.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.803;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.08;ReadPosRankSum=-0.914;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,215:218:99:5446,388,0
CP000253.1 2674847 . T C 6235.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.005;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3805;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.25;ReadPosRankSum=-0.695;SOR=0.332 GT:AD:DP:GQ:PL 1/1:1,246:248:99:6264,442,0
CP000253.1 2674859 . G T 6063.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6980;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6092,430,0
CP000253.1 2674863 . G T 6187.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0903;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6216,433,0
CP000253.1 2674894 . C A 5912.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.95;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,237:237:99:5941,418,0
CP000253.1 2674903 . A G 5736.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.972;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.62;ReadPosRankSum=0.511;SOR=1.041 GT:AD:DP:GQ:PL 1/1:2,231:233:99:5765,368,0
CP000253.1 2674990 . A G 2873.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.027;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.89;ReadPosRankSum=0.141;SOR=0.468 GT:AD:DP:GQ:PL 1/1:1,110:112:99:2902,205,0
CP000253.1 2674993 . G A 2860.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.77;SOR=1.241 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2889,205,0
CP000253.1 2675020 . G A 2562.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0501;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=1.202 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2591,184,0
CP000253.1 2675026 . A G 2226.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.7911;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2255,160,0
CP000253.1 2675053 . C T 1496.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.26;SOR=1.238 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1525,108,0
CP000253.1 2675067 . T C 329.90 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.585;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=19.41;ReadPosRankSum=2.315;SOR=0.818 GT:AD:DP:GQ:PL 0/1:2,15:17:15:358,0,15
CP000253.1 2675130 . T A 95.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:123,9,0
CP000253.1 2675149 . A G 83.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:111,9,0
CP000253.1 2675236 . T C 204.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:18:233,18,0
CP000253.1 2675253 . A G 309.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6112;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:24:338,24,0
CP000253.1 2675296 . A G 306.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:335,24,0
CP000253.1 2675306 . C A 316.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.8661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:345,24,0
CP000253.1 2675330 . G A 267.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:296,21,0
CP000253.1 2675334 . T A 261.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:290,21,0
CP000253.1 2675336 . T G 270.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:299,21,0
CP000253.1 2675337 . C G 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 2675338 . G C 267.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:296,21,0
CP000253.1 2675348 . G C 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 2675349 . T A 271.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:300,21,0
CP000253.1 2675350 . A T 315.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:344,24,0
CP000253.1 2675410 . T C 1099.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:78:1128,78,0
CP000253.1 2675422 . T C 1338.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:96:1367,96,0
CP000253.1 2675478 . G C 1948.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,80:81:99:1977,138,0
CP000253.1 2675523 . A T 2760.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1770;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2789,199,0
CP000253.1 2675535 . T C 2996.77 . AC=2;AF=1.00;AN=2;DP=119;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1481;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,118:119:99:3025,214,0
CP000253.1 2675559 . A G 3308.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6315;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3337,235,0
CP000253.1 2675607 . G A 3949.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,159:159:99:3978,280,0
CP000253.1 2675631 . C T 4515.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7479;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4544,319,0
CP000253.1 2675646 . C T 4550.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.42;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,179:180:99:4579,325,0
CP000253.1 2675649 . C A 4604.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.932;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.2652;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.72;ReadPosRankSum=1.539;SOR=0.834 GT:AD:DP:GQ:PL 1/1:1,178:179:99:4633,325,0
CP000253.1 2675655 . A T 4743.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.815;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.2001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.50;ReadPosRankSum=1.127;SOR=0.868 GT:AD:DP:GQ:PL 1/1:1,185:186:99:4772,340,0
CP000253.1 2675663 . G T 4755.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.804;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.5252;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=-0.764;SOR=0.383 GT:AD:DP:GQ:PL 1/1:1,185:186:99:4784,337,0
CP000253.1 2675667 . G A 4621.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.4414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,185:186:99:4650,331,0
CP000253.1 2675682 . A G 4781.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.4414;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=1.060 GT:AD:DP:GQ:PL 1/1:0,195:198:99:4810,343,0
CP000253.1 2675690 . G A 4929.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.627;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.4512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.02;ReadPosRankSum=-1.539;SOR=0.811 GT:AD:DP:GQ:PL 1/1:1,196:197:99:4958,355,0
CP000253.1 2675691 . G A 4888.77 . AC=2;AF=1.00;AN=2;DP=197;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.5846;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=1.083 GT:AD:DP:GQ:PL 1/1:0,197:197:99:4917,349,0
CP000253.1 2675737 . G T 5847.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.4440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.26;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,241:244:99:5876,415,0
CP000253.1 2675750 . G T 5946.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.0434;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,244:244:99:5975,418,0
CP000253.1 2675811 . A T 6060.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.4320;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.12;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,232:234:99:6089,433,0
CP000253.1 2675823 . G A 6054.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.555;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.0890;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.44;ReadPosRankSum=0.980;SOR=0.351 GT:AD:DP:GQ:PL 1/1:2,236:240:99:6083,439,0
CP000253.1 2675829 . G A 6169.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.1424;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.03;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,237:242:99:6198,442,0
CP000253.1 2675835 . G A 6089.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,239:241:99:6118,433,0
CP000253.1 2675852 . A G 6121.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,241:243:99:6150,439,0
CP000253.1 2675859 . G A 6402.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.908;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4637;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.71;ReadPosRankSum=0.473;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,248:250:99:6431,454,0
CP000253.1 2675964 . C A 5202.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5033;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.882 GT:AD:DP:GQ:PL 1/1:0,206:207:99:5231,370,0
CP000253.1 2675973 . G A 5028.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.750;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2648;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.77;ReadPosRankSum=-0.094;SOR=0.326 GT:AD:DP:GQ:PL 1/1:1,202:204:99:5057,364,0
CP000253.1 2675991 . C T 4941.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.783;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7480;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.34;ReadPosRankSum=1.208;SOR=0.528 GT:AD:DP:GQ:PL 1/1:1,194:198:99:4970,355,0
CP000253.1 2676022 . G A 4853.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,195:198:99:4882,349,0
CP000253.1 2676036 . C T 4138.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.6392;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.947 GT:AD:DP:GQ:PL 1/1:0,174:175:99:4167,301,0
CP000253.1 2676392 . T G 211.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.337;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=17.65;ReadPosRankSum=-0.871;SOR=0.293 GT:AD:DP:GQ:PL 1/1:1,11:12:18:240,18,0
CP000253.1 2676864 . A C 4282.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.895;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-1.163;SOR=0.450 GT:AD:DP:GQ:PL 1/1:1,172:173:99:4311,304,0
CP000253.1 2676963 . G A 4629.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.89;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,186:186:99:4658,325,0
CP000253.1 2676966 . T C 4683.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,188:188:99:4712,328,0
CP000253.1 2677008 . C T 4864.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.1964;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,198:201:99:4893,340,0
CP000253.1 2677032 . T C 4264.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4293,304,0
CP000253.1 2677041 . C T 4261.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8541;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,179:180:99:4290,298,0
CP000253.1 2677074 . C T 4370.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.28;ReadPosRankSum=-0.761;SOR=0.313 GT:AD:DP:GQ:PL 1/1:1,179:182:99:4399,307,0
CP000253.1 2677083 . A G 4179.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5707;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.16;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4208,298,0
CP000253.1 2677087 . G A 4199.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4228,295,0
CP000253.1 2677101 . A G 4163.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7558;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4192,298,0
CP000253.1 2677104 . T C 4383.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4640;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4412,313,0
CP000253.1 2677125 . T C 4369.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.8167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4398,310,0
CP000253.1 2677552 . A G 822.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.54;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:60:851,60,0
CP000253.1 2677564 . T C 447.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:33:476,33,0
CP000253.1 2677772 . C A 2039.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2068,141,0
CP000253.1 2677834 . C T 2053.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.57;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2082,141,0
CP000253.1 2677885 . T C 1822.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.23;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,82:82:99:1851,126,0
CP000253.1 2677891 . T C 1742.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:78:99:1771,120,0
CP000253.1 2677972 . G T 254.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.645;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.48;ReadPosRankSum=1.645;SOR=1.022 GT:AD:DP:GQ:PL 1/1:1,9:10:21:283,21,0
CP000253.1 2678019 . T G 210.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:239,18,0
CP000253.1 2678024 . T G 211.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:18:240,18,0
CP000253.1 2678133 . T A 1159.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.97;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,43:43:84:1188,84,0
CP000253.1 2678134 . T G 1124.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1153,81,0
CP000253.1 2678136 . T C 1176.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.74;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,44:45:87:1205,87,0
CP000253.1 2678413 . T C 4769.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.831;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3378;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.97;ReadPosRankSum=1.689;SOR=0.340 GT:AD:DP:GQ:PL 1/1:1,198:200:99:4798,337,0
CP000253.1 2678563 . T C 5086.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.0038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,212:212:99:5115,355,0
CP000253.1 2678656 . G A 3817.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7906;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.62;SOR=1.233 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3846,274,0
CP000253.1 2678659 . C T 3756.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=1.186 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3785,265,0
CP000253.1 2678989 . A G 261.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:290,21,0
CP000253.1 2679120 . T C 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 2679218 . A C 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 2679432 . T C 1449.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1215;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1478,102,0
CP000253.1 2679546 . C A 834.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:60:863,60,0
CP000253.1 2679825 . C A 454.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:483,33,0
CP000253.1 2679878 . A C 435.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:464,33,0
CP000253.1 2679983 . A G 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2679989 . A T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2680001 . G T 325.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.72;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:354,24,0
CP000253.1 2680064 . T A 452.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:33:481,33,0
CP000253.1 2680076 . G A 594.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.03;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:42:623,42,0
CP000253.1 2680196 . C T 1306.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7615;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:90:1335,90,0
CP000253.1 2680543 . T G 2461.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5166;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:102:99:2490,175,0
CP000253.1 2680547 . G A 2411.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1568;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.19;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:104:99:2440,172,0
CP000253.1 2680741 . A C 2399.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2428,178,0
CP000253.1 2680771 . T C 2368.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.5347;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2397,172,0
CP000253.1 2680772 . A G 2357.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.20;SOR=0.935 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2386,172,0
CP000253.1 2680828 . G A 3154.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2388;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3183,223,0
CP000253.1 2680834 . T C 3142.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3171,226,0
CP000253.1 2680951 . T A 3786.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5657;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,152:152:99:3815,268,0
CP000253.1 2680955 . T C 3797.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0194;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3826,271,0
CP000253.1 2680978 . G A 3870.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.30;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,153:154:99:3899,277,0
CP000253.1 2681068 . C A 4396.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7023;MLEAC=2;MLEAF=1.00;MQ=59.84;MQ0=0;QD=25.86;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,170:172:99:4425,319,0
CP000253.1 2681104 . A G 4078.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,163:166:99:4107,295,0
CP000253.1 2681110 . A T 4361.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.848;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8973;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=1.224;SOR=0.412 GT:AD:DP:GQ:PL 1/1:1,168:169:99:4390,310,0
CP000253.1 2681113 . A T 4229.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6559;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.11;SOR=1.165 GT:AD:DP:GQ:PL 1/1:0,162:162:99:4258,304,0
CP000253.1 2681139 . C T 4468.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.5427;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=1.083 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4497,322,0
CP000253.1 2681140 . T A 4428.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.088 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4457,319,0
CP000253.1 2681158 . A C 4377.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8885;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=1.065 GT:AD:DP:GQ:PL 1/1:0,174:175:99:4406,322,0
CP000253.1 2681185 . T C 4677.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8282;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.28;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,178:178:99:4706,340,0
CP000253.1 2681186 . T A 4715.77 . AC=2;AF=1.00;AN=2;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=1.073 GT:AD:DP:GQ:PL 1/1:0,177:178:99:4744,340,0
CP000253.1 2681209 . T C 4436.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0307;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,185:186:99:4465,319,0
CP000253.1 2681213 . C T 4622.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7207;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,186:187:99:4651,334,0
CP000253.1 2681347 . T A 5359.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9932;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,216:218:99:5388,379,0
CP000253.1 2681488 . T A 5126.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8256;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=1.099 GT:AD:DP:GQ:PL 1/1:0,196:196:99:5155,364,0
CP000253.1 2681555 . G A 4353.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,167:168:99:4382,310,0
CP000253.1 2681578 . G A 4248.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4277,301,0
CP000253.1 2681624 . C T 4495.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.028;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3518;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.45;ReadPosRankSum=0.296;SOR=0.554 GT:AD:DP:GQ:PL 1/1:1,169:173:99:4524,322,0
CP000253.1 2681655 . A G 4996.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.89;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,193:194:99:5025,358,0
CP000253.1 2681739 . A C 6790.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.876;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.0559;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.38;ReadPosRankSum=-0.657;SOR=0.728 GT:AD:DP:GQ:PL 1/1:1,247:249:99:6819,494,0
CP000253.1 2681749 . T C 6650.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0579;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.82;SOR=1.046 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6679,482,0
CP000253.1 2681847 . C T 6284.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=43.1275;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6313,454,0
CP000253.1 2681894 . T A 6378.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.905;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.3388;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.14;ReadPosRankSum=1.733;SOR=0.397 GT:AD:DP:GQ:PL 1/1:1,243:248:99:6407,454,0
CP000253.1 2682028 . G A 6081.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.486;DP=237;Dels=0.00;ExcessHet=3.0103;FS=3.843;HaplotypeScore=27.1559;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.88;ReadPosRankSum=1.025;SOR=0.834 GT:AD:DP:GQ:PL 1/1:1,234:236:99:6110,411,0
CP000253.1 2682058 . T C 5731.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.70;SOR=1.153 GT:AD:DP:GQ:PL 1/1:0,223:228:99:5760,412,0
CP000253.1 2682095 . G A 5358.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.20;SOR=1.256 GT:AD:DP:GQ:PL 1/1:0,197:198:99:5387,382,0
CP000253.1 2682103 . A C 5168.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.659;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.64;ReadPosRankSum=0.843;SOR=1.289 GT:AD:DP:GQ:PL 1/1:2,192:194:99:5197,373,0
CP000253.1 2682170 . T C 2547.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.447;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.75;ReadPosRankSum=0.081;SOR=0.427 GT:AD:DP:GQ:PL 1/1:3,109:112:99:2576,118,0
CP000253.1 2682177 . C G 2559.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.015;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.48;ReadPosRankSum=-0.689;SOR=0.830 GT:AD:DP:GQ:PL 1/1:2,107:111:99:2588,142,0
CP000253.1 2682189 . C A 2499.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.952;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8228;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.27;ReadPosRankSum=0.118;SOR=0.717 GT:AD:DP:GQ:PL 1/1:3,100:104:99:2528,139,0
CP000253.1 2682235 . A G 1408.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.252;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4581;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.88;ReadPosRankSum=1.656;SOR=0.960 GT:AD:DP:GQ:PL 1/1:2,57:59:64:1437,64,0
CP000253.1 2682349 . A G 1221.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7128;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1250,87,0
CP000253.1 2682376 . T A 1593.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8561;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1622,111,0
CP000253.1 2682403 . C T 2072.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4409;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2101,144,0
CP000253.1 2682457 . C T 2612.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2641,181,0
CP000253.1 2682469 . T C 2619.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2648,184,0
CP000253.1 2682586 . T A 2542.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9089;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.30;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2571,178,0
CP000253.1 2682607 . G A 2389.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2418,166,0
CP000253.1 2682734 . A G 1001.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.69;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:72:1030,72,0
CP000253.1 2682822 . T C 2492.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.996;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.39;ReadPosRankSum=1.582;SOR=1.237 GT:AD:DP:GQ:PL 1/1:1,90:91:99:2521,184,0
CP000253.1 2683202 . G A 3760.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7687;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.48;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3789,271,0
CP000253.1 2683238 . C T 4353.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.887;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6039;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.39;ReadPosRankSum=1.009;SOR=0.265 GT:AD:DP:GQ:PL 1/1:1,164:165:99:4382,313,0
CP000253.1 2683274 . T C 3520.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,153:155:99:3549,250,0
CP000253.1 2683378 . T C 4042.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7157;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,162:163:99:4071,286,0
CP000253.1 2683469 . G T 3230.05 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5384;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3259,229,0
CP000253.1 2683785 . T C 5563.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6725;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,217:218:99:5592,397,0
CP000253.1 2683854 . G A 5851.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.8662;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=24.38;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,240:240:99:5880,412,0
CP000253.1 2684466 . G A 2107.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3303;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.37;SOR=1.223 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2136,153,0
CP000253.1 2684645 . A C 6548.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.406;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.6861;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.20;ReadPosRankSum=1.217;SOR=0.849 GT:AD:DP:GQ:PL 1/1:4,246:250:99:6577,478,0
CP000253.1 2684664 . C T 6619.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.5396;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,246:249:99:6648,479,0
CP000253.1 2684730 . T C 6499.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2476;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.64;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,244:249:99:6528,476,0
CP000253.1 2684741 . C T 6792.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9827;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.39;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6821,494,0
CP000253.1 2684963 . T G 5931.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.643;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.03;ReadPosRankSum=1.996;SOR=1.126 GT:AD:DP:GQ:PL 1/1:2,235:238:99:5960,421,0
CP000253.1 2684972 . C A 6035.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6625;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=1.108 GT:AD:DP:GQ:PL 1/1:0,238:238:99:6064,427,0
CP000253.1 2685004 . C T 6229.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4156;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=1.080 GT:AD:DP:GQ:PL 1/1:0,247:248:99:6258,442,0
CP000253.1 2685018 . C T 5111.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4289;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.882 GT:AD:DP:GQ:PL 1/1:0,206:208:99:5140,361,0
CP000253.1 2685148 . C T 3636.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.006;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.74;ReadPosRankSum=0.766;SOR=0.283 GT:AD:DP:GQ:PL 1/1:1,146:147:99:3665,256,0
CP000253.1 2685214 . T A 2849.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4718;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2878,205,0
CP000253.1 2685260 . G T 1956.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.733;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6819;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=23.02;ReadPosRankSum=1.224;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,84:86:99:1985,141,0
CP000253.1 2685781 . A G 3419.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.78;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,138:139:99:3448,247,0
CP000253.1 2685916 . T C 4840.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.721;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1835;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.39;ReadPosRankSum=-1.431;SOR=0.285 GT:AD:DP:GQ:PL 1/1:1,206:209:99:4869,340,0
CP000253.1 2686006 . G T 4452.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2361;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4481,313,0
CP000253.1 2686120 . A C 2634.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,109:109:99:2663,184,0
CP000253.1 2686161 . A G 1733.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6168;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1762,123,0
CP000253.1 2686162 . A G 1725.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:71:99:1754,123,0
CP000253.1 2686168 . T C 1782.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1811,126,0
CP000253.1 2686169 . T G 1724.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.965;DP=71;Dels=0.00;ExcessHet=3.0103;FS=3.266;HaplotypeScore=2.7227;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.29;ReadPosRankSum=-0.342;SOR=0.499 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1753,123,0
CP000253.1 2686266 . C T 1247.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:50:90:1276,90,0
CP000253.1 2686280 . G A 1267.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1296,90,0
CP000253.1 2686392 . G A 894.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.96;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:66:923,66,0
CP000253.1 2686604 . A T 2228.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:94:99:2257,160,0
CP000253.1 2686661 . C T 3872.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4188;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.15;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3901,271,0
CP000253.1 2686778 . G A 4527.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2132;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,187:187:99:4556,319,0
CP000253.1 2686895 . T A 3823.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.355;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8565;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.20;ReadPosRankSum=0.452;SOR=0.134 GT:AD:DP:GQ:PL 1/1:2,156:159:99:3852,243,0
CP000253.1 2686931 . T A 4057.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.742;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6023;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.74;ReadPosRankSum=-0.015;SOR=0.743 GT:AD:DP:GQ:PL 1/1:2,162:165:99:4086,254,0
CP000253.1 2686970 . A G 3943.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.349;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2033;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.12;ReadPosRankSum=-0.415;SOR=0.759 GT:AD:DP:GQ:PL 1/1:2,155:157:99:3972,253,0
CP000253.1 2686991 . G A 3773.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.804;DP=160;Dels=0.01;ExcessHet=3.0103;FS=2.072;HaplotypeScore=24.6650;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.19;ReadPosRankSum=-0.617;SOR=0.234 GT:AD:DP:GQ:PL 1/1:4,152:159:99:3802,232,0
CP000253.1 2687546 . C T 997.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:72:1026,72,0
CP000253.1 2687561 . G C 1023.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:44:75:1052,75,0
CP000253.1 2688450 . A G 1856.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=1.195 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1885,135,0
CP000253.1 2688525 . G A 1776.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.66;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1805,129,0
CP000253.1 2688534 . T A 1527.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.29;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1556,111,0
CP000253.1 2688546 . T C 1402.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1431,102,0
CP000253.1 2688765 . T C 3363.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8671;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=1.001 GT:AD:DP:GQ:PL 1/1:0,139:141:99:3392,241,0
CP000253.1 2688807 . C T 3893.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9767;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.96;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,156:157:99:3922,280,0
CP000253.1 2689048 . G T 4863.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.3769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,198:198:99:4892,343,0
CP000253.1 2689056 . C T 4648.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6094;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,192:193:99:4677,325,0
CP000253.1 2689371 . C T 1119.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.34;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,46:46:81:1148,81,0
CP000253.1 2689413 . C T 651.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:48:680,48,0
CP000253.1 2689446 . A C 564.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.89;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:42:593,42,0
CP000253.1 2689629 . T C 3283.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.938;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.1113;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.06;ReadPosRankSum=0.978;SOR=1.024 GT:AD:DP:GQ:PL 1/1:1,125:128:99:3312,235,0
CP000253.1 2690010 . A G 6213.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.9895;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,246:250:99:6242,451,0
CP000253.1 2690096 . T G 6050.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.7184;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.42;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,229:231:99:6079,445,0
CP000253.1 2690256 . C T 6458.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.5072;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.94;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6487,472,0
CP000253.1 2690570 . T G 4988.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.45;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,204:204:99:5017,352,0
CP000253.1 2690706 . C T 5355.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.5609;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,229:231:99:5384,373,0
CP000253.1 2691904 . A G 6033.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2615;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,244:248:99:6062,427,0
CP000253.1 2692025 . A G 6556.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1138;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6585,470,0
CP000253.1 2692167 . T G 4242.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.796;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4324;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.38;ReadPosRankSum=-1.275;SOR=0.314 GT:AD:DP:GQ:PL 1/1:1,173:174:99:4271,304,0
CP000253.1 2692415 . C A 2790.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6611;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.27;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2819,199,0
CP000253.1 2692607 . A G 917.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9588;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:946,66,0
CP000253.1 2692643 . T A 978.77 . AC=2;AF=1.00;AN=2;DP=38;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6069;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,38:38:72:1007,72,0
CP000253.1 2692849 . A G 2855.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0815;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,120:122:99:2884,202,0
CP000253.1 2693137 . T C 2558.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.706;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8185;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.14;ReadPosRankSum=-1.824;SOR=0.900 GT:AD:DP:GQ:PL 1/1:2,104:106:99:2587,150,0
CP000253.1 2693143 . G A 2330.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.685;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0392;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.78;ReadPosRankSum=-1.710;SOR=0.823 GT:AD:DP:GQ:PL 1/1:2,96:98:99:2359,132,0
CP000253.1 2693491 . T C 4947.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8087;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,198:200:99:4976,355,0
CP000253.1 2693518 . G A 6027.77 . AC=2;AF=1.00;AN=2;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.91;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,242:243:99:6056,424,0
CP000253.1 2694324 . T A 444.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:20:33:473,33,0
CP000253.1 2694601 . T G 189.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.10;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:218,15,0
CP000253.1 2694963 . C A 4846.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.492;DP=196;Dels=0.00;ExcessHet=3.0103;FS=4.038;HaplotypeScore=21.6765;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=2.067;SOR=0.819 GT:AD:DP:GQ:PL 1/1:2,193:196:99:4875,346,0
CP000253.1 2695480 . C T 4261.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8117;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4290,304,0
CP000253.1 2696176 . A T 4889.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.6988;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=24.70;SOR=0.988 GT:AD:DP:GQ:PL 1/1:0,198:199:99:4918,349,0
CP000253.1 2696185 . A G 4501.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.8784;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=23.69;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,190:193:99:4530,319,0
CP000253.1 2696188 . T C 4639.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.4096;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=24.42;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,190:190:99:4668,334,0
CP000253.1 2696546 . T C 1070.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.509;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6055;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=1.157;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,44:46:81:1099,81,0
CP000253.1 2696586 . C T 880.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.47;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:63:909,63,0
CP000253.1 2696646 . A G 1184.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.18;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1213,84,0
CP000253.1 2696659 . A C 1231.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.908;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.69;ReadPosRankSum=1.734;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,51:52:87:1260,87,0
CP000253.1 2696927 . T C 1379.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1408,99,0
CP000253.1 2696958 . C T 1073.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5317;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:75:1102,75,0
CP000253.1 2697124 . C A 304.78 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:24:333,24,0
CP000253.1 2697149 . T G 178.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:15:207,15,0
CP000253.1 2697207 . T G 173.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:202,15,0
CP000253.1 2697744 . G A 1041.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:72:1070,72,0
CP000253.1 2697815 . T C 1554.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1583,108,0
CP000253.1 2697816 . A T 1554.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.56;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1583,108,0
CP000253.1 2697835 . G A 1596.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1625,111,0
CP000253.1 2697877 . C T 1837.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.50;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1866,129,0
CP000253.1 2698102 . T G 3455.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0304;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.86;SOR=1.001 GT:AD:DP:GQ:PL 1/1:0,139:140:99:3484,244,0
CP000253.1 2698759 . A T 4509.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.750;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.64;ReadPosRankSum=0.824;SOR=0.281 GT:AD:DP:GQ:PL 1/1:1,182:184:99:4538,322,0
CP000253.1 2698966 . T C 4383.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.3495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,170:171:99:4412,319,0
CP000253.1 2699110 . G A 3706.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7004;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.26;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,136:137:99:3735,268,0
CP000253.1 2699620 . G A 4865.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.712;DP=198;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=36.7143;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.83;ReadPosRankSum=1.733;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,195:197:99:4894,346,0
CP000253.1 2699728 . A G 5103.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.893;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1796;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.42;ReadPosRankSum=0.224;SOR=0.239 GT:AD:DP:GQ:PL 1/1:1,208:211:99:5132,364,0
CP000253.1 2699746 . C A 5191.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.804;DP=213;Dels=0.00;ExcessHet=3.0103;FS=3.157;HaplotypeScore=14.9365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.61;ReadPosRankSum=-1.149;SOR=0.346 GT:AD:DP:GQ:PL 1/1:1,210:213:99:5220,348,0
CP000253.1 2699775 . A C 5218.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.967;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0910;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.39;ReadPosRankSum=0.704;SOR=0.242 GT:AD:DP:GQ:PL 1/1:1,213:214:99:5247,367,0
CP000253.1 2700294 . A G 6137.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.849;DP=249;Dels=0.00;ExcessHet=3.0103;FS=3.189;HaplotypeScore=34.0789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.75;ReadPosRankSum=0.140;SOR=0.367 GT:AD:DP:GQ:PL 1/1:1,247:249:99:6166,411,0
CP000253.1 2700537 . G A 6864.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4279;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.46;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,250:250:99:6893,500,0
CP000253.1 2701008 . G A 4212.77 . AC=2;AF=1.00;AN=2;DP=159;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,158:159:99:4241,304,0
CP000253.1 2701137 . A G 2824.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6197;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.22;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,112:114:99:2853,205,0
CP000253.1 2701174 . G T 2696.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.305;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.30;ReadPosRankSum=0.265;SOR=0.270 GT:AD:DP:GQ:PL 1/1:1,110:112:99:2725,163,0
CP000253.1 2701325 . C T 1710.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2535;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.53;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1739,123,0
CP000253.1 2701612 . C A 732.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.14;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:54:761,54,0
CP000253.1 2701760 . A T 4225.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.0739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.92;SOR=1.436 GT:AD:DP:GQ:PL 1/1:0,157:157:99:4254,304,0
CP000253.1 2701961 . C T 5901.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.9701;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,248:249:99:5930,418,0
CP000253.1 2702207 . A C 2651.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.719;DP=103;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=117.6573;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.00;ReadPosRankSum=0.073;SOR=1.225 GT:AD:DP:GQ:PL 1/1:2,100:102:99:2680,168,0
CP000253.1 2702211 . A G 2704.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.838;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=112.3095;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.26;ReadPosRankSum=-1.708;SOR=0.960 GT:AD:DP:GQ:PL 1/1:1,102:103:99:2733,196,0
CP000253.1 2702212 . A G 2681.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=111.4154;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2710,196,0
CP000253.1 2702216 . A G 2739.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.776;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.60;ReadPosRankSum=-1.355;SOR=0.435 GT:AD:DP:GQ:PL 1/1:1,102:103:99:2768,198,0
CP000253.1 2702219 . A G 2751.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0868;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=1.212 GT:AD:DP:GQ:PL 1/1:0,102:103:99:2780,199,0
CP000253.1 2702240 . A G 2631.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.58;SOR=1.145 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2660,190,0
CP000253.1 2702249 . G A 2574.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2586;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.39;SOR=1.203 GT:AD:DP:GQ:PL 1/1:0,94:96:99:2603,187,0
CP000253.1 2703549 . A G 2081.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9081;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:89:99:2110,147,0
CP000253.1 2703923 . G T 4934.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1251;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,206:206:99:4963,343,0
CP000253.1 2704071 . A G 4042.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.287;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7974;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.21;ReadPosRankSum=-0.037;SOR=0.755 GT:AD:DP:GQ:PL 1/1:2,165:169:99:4071,259,0
CP000253.1 2704074 . G A 4126.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.3190;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.01;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,165:166:99:4155,295,0
CP000253.1 2704167 . G T 2626.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.8206;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=1.029 GT:AD:DP:GQ:PL 1/1:0,101:102:99:2655,190,0
CP000253.1 2704233 . G A 2181.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5234;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2210,160,0
CP000253.1 2704242 . A G 2047.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.782;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1801;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.67;ReadPosRankSum=-1.295;SOR=0.458 GT:AD:DP:GQ:PL 1/1:1,82:84:99:2076,156,0
CP000253.1 2704248 . G A 2172.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.740;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.56;ReadPosRankSum=1.081;SOR=0.532 GT:AD:DP:GQ:PL 1/1:1,84:85:99:2201,157,0
CP000253.1 2704251 . T C 2115.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2028;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:85:99:2144,154,0
CP000253.1 2704263 . G A 2317.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9355;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2346,166,0
CP000253.1 2704482 . T C 3762.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.908;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.23;ReadPosRankSum=-0.535;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,161:162:99:3791,230,0
CP000253.1 2704511 . G A 3534.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.4203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,140:141:99:3563,250,0
CP000253.1 2704515 . A G 3512.77 . AC=2;AF=1.00;AN=2;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0049;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,143:144:99:3541,250,0
CP000253.1 2704536 . C T 3192.79 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.022;DP=136;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6182;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.48;ReadPosRankSum=-0.930;SOR=0.247 GT:AD:DP:GQ:PL 1/1:1,135:136:99:3221,194,0
CP000253.1 2705056 . C T 259.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:21:288,21,0
CP000253.1 2705125 . C T 56.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:84,6,0
CP000253.1 2705141 . C T 125.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:153,12,0
CP000253.1 2705157 . T C 142.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:170,12,0
CP000253.1 2705159 . A G 141.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:169,12,0
CP000253.1 2705161 . A T 140.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:12:168,12,0
CP000253.1 2705173 . C T 176.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.66;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:205,15,0
CP000253.1 2705203 . A G 190.90 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.09;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:11:15:219,15,0
CP000253.1 2705205 . T C 216.84 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:18:245,18,0
CP000253.1 2705230 . A T 164.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:193,15,0
CP000253.1 2705291 . A G 404.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:433,30,0
CP000253.1 2705302 . C T 405.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:30:434,30,0
CP000253.1 2705390 . A C 201.84 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:18:230,18,0
CP000253.1 2706012 . A G 6454.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0793;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.89;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,240:245:99:6483,466,0
CP000253.1 2706102 . G A 6481.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.931;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.14;ReadPosRankSum=1.664;SOR=0.502 GT:AD:DP:GQ:PL 1/1:1,247:250:99:6510,464,0
CP000253.1 2706751 . T A 1127.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.3203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:84:1156,84,0
CP000253.1 2706772 . C T 1268.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.720;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6114;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.89;ReadPosRankSum=-0.744;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,48:49:96:1297,96,0
CP000253.1 2707162 . C T 3257.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5106;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.92;SOR=1.188 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3286,235,0
CP000253.1 2707326 . A G 1598.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4325;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1627,114,0
CP000253.1 2707417 . C T 2408.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8035;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2437,175,0
CP000253.1 2707501 . A G 3904.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,156:157:99:3933,277,0
CP000253.1 2707630 . A T 5474.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.3444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,239:239:99:5503,379,0
CP000253.1 2707719 . G A 5150.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.31;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,221:222:99:5179,355,0
CP000253.1 2707795 . A G 4284.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,182:185:99:4313,301,0
CP000253.1 2708039 . C T 329.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.48;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:27:358,27,0
CP000253.1 2708158 . A G 1598.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.79;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1627,114,0
CP000253.1 2708578 . T C 3897.77 . AC=2;AF=1.00;AN=2;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1003;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.21;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,161:162:99:3926,280,0
CP000253.1 2708617 . T C 3597.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.775;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.16;ReadPosRankSum=-1.248;SOR=0.452 GT:AD:DP:GQ:PL 1/1:1,142:145:99:3626,259,0
CP000253.1 2708623 . C T 3616.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6592;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3645,259,0
CP000253.1 2708626 . A G 3535.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4334;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.73;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3564,256,0
CP000253.1 2709782 . C T 309.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:338,24,0
CP000253.1 2709892 . G A 1472.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1501,105,0
CP000253.1 2710311 . T G 3352.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.795;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.95;ReadPosRankSum=1.535;SOR=0.385 GT:AD:DP:GQ:PL 1/1:1,139:140:99:3381,238,0
CP000253.1 2710832 . T C 4694.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.478;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.47;ReadPosRankSum=-1.193;SOR=0.132 GT:AD:DP:GQ:PL 1/1:2,198:200:99:4723,334,0
CP000253.1 2711530 . T C 1488.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.900;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=7.485;QD=27.07;ReadPosRankSum=-0.032;SOR=0.253 GT:AD:DP:GQ:PL 1/1:1,54:55:99:1517,108,0
CP000253.1 2711727 . T A 2415.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.1929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.16;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2444,175,0
CP000253.1 2711749 . G A 2707.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9551;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2736,193,0
CP000253.1 2711826 . G A 4194.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4223,295,0
CP000253.1 2711835 . A C 4353.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6128;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.88;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,175:176:99:4382,307,0
CP000253.1 2711938 . A G 5472.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0647;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,227:231:99:5501,385,0
CP000253.1 2711955 . G A 5621.77 . AC=2;AF=1.00;AN=2;DP=237;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.5972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.82;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,236:237:99:5650,397,0
CP000253.1 2712126 . C T 6020.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.0407;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,241:242:99:6049,424,0
CP000253.1 2712661 . C T 503.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.90;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:532,36,0
CP000253.1 2712849 . A G 410.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:19:30:439,30,0
CP000253.1 2712908 . A T 617.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:45:646,45,0
CP000253.1 2713003 . T G 2116.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8246;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.01;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2145,150,0
CP000253.1 2713131 . A G 3164.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.13;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,143:143:99:3193,217,0
CP000253.1 2713144 . T A 3223.52 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.110;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.4584;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.08;ReadPosRankSum=-0.771;SOR=0.245 GT:AD:DP:GQ:PL 1/1:1,145:146:99:3252,220,0
CP000253.1 2713264 . T C 2400.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2429,169,0
CP000253.1 2713450 . G A 147.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:175,12,0
CP000253.1 2713495 . T C 234.84 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.06;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:18:263,18,0
CP000253.1 2713501 . C T 316.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:24:345,24,0
CP000253.1 2713658 . C T 351.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:380,27,0
CP000253.1 2713709 . A G 228.84 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:18:257,18,0
CP000253.1 2714127 . G A 275.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:21:304,21,0
CP000253.1 2714328 . T G 182.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:211,15,0
CP000253.1 2714679 . C T 14.68 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=14.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:41,3,0
CP000253.1 2714738 . G C 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2714746 . T G 18.59 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=9.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:3:45,3,0
CP000253.1 2714843 . G A 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 2715161 . A G 2529.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,110:110:99:2558,175,0
CP000253.1 2716310 . A G 4710.77 . AC=2;AF=1.00;AN=2;DP=201;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4193;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,200:201:99:4739,328,0
CP000253.1 2717059 . T C 3966.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,162:164:99:3995,280,0
CP000253.1 2718370 . T G 809.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:57:838,57,0
CP000253.1 2718525 . C T 316.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.37;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:345,24,0
CP000253.1 2719134 . T G 2916.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8780;MLEAC=2;MLEAF=1.00;MQ=59.79;MQ0=0;QD=24.51;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,119:121:99:2945,205,0
CP000253.1 2719219 . C T 1489.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0721;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.09;SOR=1.262 GT:AD:DP:GQ:PL 1/1:0,55:56:99:1518,108,0
CP000253.1 2719314 . T G 1128.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1157,81,0
CP000253.1 2719315 . C T 1199.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3417;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:87:1228,87,0
CP000253.1 2719424 . T C 871.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3617;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=1.209 GT:AD:DP:GQ:PL 1/1:0,36:36:66:900,66,0
CP000253.1 2719681 . C A 3843.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.687;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.3262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.63;ReadPosRankSum=1.558;SOR=0.542 GT:AD:DP:GQ:PL 1/1:1,149:150:99:3872,277,0
CP000253.1 2719743 . G A 4831.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.239;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.9218;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.80;ReadPosRankSum=0.964;SOR=0.174 GT:AD:DP:GQ:PL 1/1:2,201:203:99:4860,308,0
CP000253.1 2719749 . T C 4909.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.741;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.9411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.60;ReadPosRankSum=0.036;SOR=0.169 GT:AD:DP:GQ:PL 1/1:2,206:208:99:4938,311,0
CP000253.1 2719906 . C T 5072.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.5748;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,221:225:99:5101,352,0
CP000253.1 2719914 . T C 5049.77 . AC=2;AF=1.00;AN=2;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.7209;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,219:223:99:5078,352,0
CP000253.1 2720034 . T C 3032.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7352;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.32;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,111:113:99:3061,223,0
CP000253.1 2720091 . G A 2625.77 . AC=2;AF=1.00;AN=2;DP=100;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,99:100:99:2654,190,0
CP000253.1 2720364 . G T 4090.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.606;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=1.350;SOR=0.783 GT:AD:DP:GQ:PL 1/1:2,161:163:99:4119,298,0
CP000253.1 2720496 . C T 5258.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3599;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,216:219:99:5287,373,0
CP000253.1 2720508 . A T 5280.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.299;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.6213;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.79;ReadPosRankSum=-1.143;SOR=0.246 GT:AD:DP:GQ:PL 1/1:4,218:223:99:5309,376,0
CP000253.1 2720736 . T G 4154.77 . AC=2;AF=1.00;AN=2;DP=166;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4183,298,0
CP000253.1 2720817 . A C 2307.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.717;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9765;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.55;ReadPosRankSum=-0.478;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,97:99:99:2336,166,0
CP000253.1 2720869 . C T 953.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5849;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,38:43:75:982,75,0
CP000253.1 2720871 . A G 958.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.4789;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,41:42:72:987,72,0
CP000253.1 2720872 . A C 890.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.163;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2604;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.21;ReadPosRankSum=1.715;SOR=1.022 GT:AD:DP:GQ:PL 1/1:2,40:42:66:919,66,0
CP000253.1 2720876 . G A 1059.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2393;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.23;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1088,78,0
CP000253.1 2720878 . C T 1021.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4511;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.54;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:42:75:1050,75,0
CP000253.1 2720907 . C T 1068.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1681;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,44:45:78:1097,78,0
CP000253.1 2720913 . A T 1016.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.792;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0902;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.65;ReadPosRankSum=1.733;SOR=0.849 GT:AD:DP:GQ:PL 1/1:1,42:45:75:1045,75,0
CP000253.1 2720921 . C A 1071.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7539;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,43:43:81:1100,81,0
CP000253.1 2720922 . G A 1046.77 . AC=2;AF=1.00;AN=2;DP=43;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6919;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,42:43:78:1075,78,0
CP000253.1 2720935 . C T 1277.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1496;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,52:53:93:1306,93,0
CP000253.1 2720946 . T A 1254.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.3936;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=1.157 GT:AD:DP:GQ:PL 1/1:0,50:50:90:1283,90,0
CP000253.1 2721223 . A T 1017.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:72:1046,72,0
CP000253.1 2721745 . A G 342.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.48;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:27:371,27,0
CP000253.1 2721790 . G C 364.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:27:393,27,0
CP000253.1 2721960 . T C 655.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.29;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:684,48,0
CP000253.1 2721996 . A T 527.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:556,39,0
CP000253.1 2721997 . A T 534.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:39:563,39,0
CP000253.1 2722011 . T C 585.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:45:614,45,0
CP000253.1 2722068 . G A 1282.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.67;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:93:1311,93,0
CP000253.1 2722083 . A G 1297.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4690;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:54:93:1326,93,0
CP000253.1 2722133 . A G 1384.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2952;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1413,99,0
CP000253.1 2722191 . A T 1679.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1708,117,0
CP000253.1 2722193 . G A 1637.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1666,114,0
CP000253.1 2722307 . G A 3381.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,148:149:99:3410,235,0
CP000253.1 2722559 . C T 1296.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1325,93,0
CP000253.1 2722746 . A G 1678.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4673;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.00;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1707,117,0
CP000253.1 2722752 . G A 1851.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4673;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.44;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,79:80:99:1880,129,0
CP000253.1 2722758 . C T 1690.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1719,120,0
CP000253.1 2723223 . A G 28.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.427;DP=82;Dels=0.00;ExcessHet=3.0103;FS=1.716;HaplotypeScore=449.5779;MLEAC=1;MLEAF=0.500;MQ=55.48;MQ0=2;MQRankSum=-0.506;QD=0.35;ReadPosRankSum=1.806;SOR=1.256 GT:AD:DP:GQ:PL 0/1:73,9:82:57:57,0,1837
CP000253.1 2723226 . T C 128.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.132;DP=80;Dels=0.00;ExcessHet=3.0103;FS=3.325;HaplotypeScore=302.0801;MLEAC=1;MLEAF=0.500;MQ=55.36;MQ0=2;MQRankSum=0.250;QD=1.61;ReadPosRankSum=-3.484;SOR=0.242 GT:AD:DP:GQ:PL 0/1:69,11:80:99:157,0,1797
CP000253.1 2723229 . A G 28.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.232;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=137.3665;MLEAC=1;MLEAF=0.500;MQ=55.17;MQ0=2;MQRankSum=-0.391;QD=0.37;ReadPosRankSum=-2.780;SOR=0.345 GT:AD:DP:GQ:PL 0/1:70,7:77:57:57,0,1657
CP000253.1 2723232 . C T 301.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.739;DP=73;Dels=0.00;ExcessHet=3.0103;FS=3.006;HaplotypeScore=25.1211;MLEAC=1;MLEAF=0.500;MQ=54.90;MQ0=2;MQRankSum=-1.883;QD=4.13;ReadPosRankSum=0.369;SOR=1.158 GT:AD:DP:GQ:PL 0/1:58,15:73:99:330,0,1382
CP000253.1 2723235 . G A 183.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.028;DP=73;Dels=0.00;ExcessHet=3.0103;FS=3.608;HaplotypeScore=29.9102;MLEAC=1;MLEAF=0.500;MQ=54.90;MQ0=2;MQRankSum=-1.881;QD=2.52;ReadPosRankSum=-0.056;SOR=1.539 GT:AD:DP:GQ:PL 0/1:61,12:73:99:212,0,1480
CP000253.1 2723277 . G A 461.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.662;DP=76;Dels=0.00;ExcessHet=3.0103;FS=7.995;HaplotypeScore=170.0004;MLEAC=1;MLEAF=0.500;MQ=51.42;MQ0=3;MQRankSum=0.569;QD=6.16;ReadPosRankSum=-3.736;SOR=0.184 GT:AD:DP:GQ:PL 0/1:47,28:76:99:490,0,911
CP000253.1 2723280 . T C 249.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.250;DP=77;Dels=0.00;ExcessHet=3.0103;FS=9.728;HaplotypeScore=48.7406;MLEAC=1;MLEAF=0.500;MQ=51.34;MQ0=3;MQRankSum=2.077;QD=3.29;ReadPosRankSum=-2.984;SOR=0.121 GT:AD:DP:GQ:PL 0/1:58,18:77:99:278,0,1314
CP000253.1 2723283 . G A 547.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.127;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=52.4952;MLEAC=1;MLEAF=0.500;MQ=51.34;MQ0=3;MQRankSum=-0.082;QD=7.61;ReadPosRankSum=2.519;SOR=0.661 GT:AD:DP:GQ:PL 0/1:41,31:77:99:576,0,727
CP000253.1 2723289 . G A 622.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.850;DP=73;Dels=0.00;ExcessHet=3.0103;FS=1.116;HaplotypeScore=58.6505;MLEAC=1;MLEAF=0.500;MQ=51.12;MQ0=3;MQRankSum=0.870;QD=8.77;ReadPosRankSum=3.455;SOR=0.946 GT:AD:DP:GQ:PL 0/1:35,36:73:99:651,0,687
CP000253.1 2723295 . A G 22.79 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.934;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.0551;MLEAC=1;MLEAF=0.500;MQ=48.08;MQ0=3;MQRankSum=1.671;QD=0.40;ReadPosRankSum=-0.197;SOR=2.117 GT:AD:DP:GQ:PL 0/1:47,10:58:51:51,0,916
CP000253.1 2723298 . C T 543.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.456;DP=57;Dels=0.00;ExcessHet=3.0103;FS=3.751;HaplotypeScore=40.3602;MLEAC=1;MLEAF=0.500;MQ=47.84;MQ0=3;MQRankSum=-3.136;QD=9.89;ReadPosRankSum=-0.652;SOR=1.863 GT:AD:DP:GQ:PL 0/1:29,26:57:99:572,0,613
CP000253.1 2723301 . G A 89.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.038;DP=58;Dels=0.00;ExcessHet=3.0103;FS=5.217;HaplotypeScore=38.1308;MLEAC=1;MLEAF=0.500;MQ=47.43;MQ0=4;MQRankSum=-2.228;QD=1.69;ReadPosRankSum=-1.141;SOR=2.358 GT:AD:DP:GQ:PL 0/1:43,10:58:99:118,0,780
CP000253.1 2723307 . G A 10.20 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.390;DP=58;Dels=0.00;ExcessHet=3.0103;FS=2.409;HaplotypeScore=29.8366;MLEAC=1;MLEAF=0.500;MQ=46.82;MQ0=4;MQRankSum=1.302;QD=0.18;ReadPosRankSum=-0.502;SOR=1.179 GT:AD:DP:GQ:PL 0/1:51,6:58:38:38,0,1014
CP000253.1 2723319 . A G 68.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.989;DP=54;Dels=0.00;ExcessHet=3.0103;FS=2.525;HaplotypeScore=39.3891;MLEAC=1;MLEAF=0.500;MQ=46.42;MQ0=4;MQRankSum=0.572;QD=1.30;ReadPosRankSum=0.515;SOR=2.833 GT:AD:DP:GQ:PL 0/1:39,14:54:97:97,0,731
CP000253.1 2723328 . A G 664.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.964;DP=51;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=65.7639;MLEAC=1;MLEAF=0.500;MQ=44.72;MQ0=4;MQRankSum=3.259;QD=14.45;ReadPosRankSum=0.000;SOR=0.818 GT:AD:DP:GQ:PL 0/1:12,34:49:99:693,0,111
CP000253.1 2723331 . G A 14.91 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.200;DP=53;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=67.8430;MLEAC=1;MLEAF=0.500;MQ=43.02;MQ0=4;MQRankSum=-1.248;QD=0.32;ReadPosRankSum=0.193;SOR=0.899 GT:AD:DP:GQ:PL 0/1:39,8:51:43:43,0,787
CP000253.1 2723337 . A G 512.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.644;DP=53;Dels=0.04;ExcessHet=3.0103;FS=0.000;HaplotypeScore=74.8923;MLEAC=1;MLEAF=0.500;MQ=41.79;MQ0=4;MQRankSum=3.327;QD=10.05;ReadPosRankSum=0.215;SOR=0.618 GT:AD:DP:GQ:PL 0/1:23,28:51:99:541,0,238
CP000253.1 2723340 . C T 223.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.558;DP=52;Dels=0.04;ExcessHet=3.0103;FS=3.222;HaplotypeScore=67.4146;MLEAC=1;MLEAF=0.500;MQ=41.36;MQ0=4;MQRankSum=-3.138;QD=4.48;ReadPosRankSum=1.086;SOR=1.445 GT:AD:DP:GQ:PL 0/1:28,22:50:99:252,0,343
CP000253.1 2723343 . A G 70.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.232;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=46.7151;MLEAC=1;MLEAF=0.500;MQ=41.41;MQ0=4;MQRankSum=0.805;QD=1.42;ReadPosRankSum=-1.010;SOR=0.348 GT:AD:DP:GQ:PL 0/1:43,7:54:99:99,0,561
CP000253.1 2723349 . A G 353.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.137;DP=82;Dels=0.00;ExcessHet=3.0103;FS=8.898;HaplotypeScore=63.6275;MLEAC=1;MLEAF=0.500;MQ=42.73;MQ0=5;MQRankSum=0.942;QD=4.37;ReadPosRankSum=-1.140;SOR=2.050 GT:AD:DP:GQ:PL 0/1:59,22:82:99:382,0,1116
CP000253.1 2723358 . T C 253.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.988;DP=80;Dels=0.00;ExcessHet=3.0103;FS=4.919;HaplotypeScore=82.0667;MLEAC=1;MLEAF=0.500;MQ=42.67;MQ0=5;MQRankSum=0.035;QD=3.25;ReadPosRankSum=-3.324;SOR=2.093 GT:AD:DP:GQ:PL 0/1:63,15:80:99:282,0,1270
CP000253.1 2723361 . A G 885.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.105;DP=80;Dels=0.00;ExcessHet=3.0103;FS=1.085;HaplotypeScore=102.3030;MLEAC=1;MLEAF=0.500;MQ=42.14;MQ0=6;MQRankSum=0.987;QD=11.21;ReadPosRankSum=-1.416;SOR=0.549 GT:AD:DP:GQ:PL 0/1:36,43:80:99:914,0,605
CP000253.1 2723367 . A G 393.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.354;DP=87;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=89.4603;MLEAC=1;MLEAF=0.500;MQ=41.58;MQ0=7;MQRankSum=1.921;QD=4.58;ReadPosRankSum=1.720;SOR=0.898 GT:AD:DP:GQ:PL 0/1:62,24:86:99:422,0,1165
CP000253.1 2723370 . C T 684.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.375;DP=87;Dels=0.01;ExcessHet=3.0103;FS=5.297;HaplotypeScore=83.6405;MLEAC=1;MLEAF=0.500;MQ=41.58;MQ0=7;MQRankSum=-1.345;QD=8.15;ReadPosRankSum=3.649;SOR=0.271 GT:AD:DP:GQ:PL 0/1:38,46:86:99:713,0,859
CP000253.1 2723385 . G A 265.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.408;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=48.1917;MLEAC=1;MLEAF=0.500;MQ=38.33;MQ0=7;MQRankSum=-0.300;QD=2.92;ReadPosRankSum=-0.025;SOR=1.365 GT:AD:DP:GQ:PL 0/1:66,25:93:99:294,0,1059
CP000253.1 2723391 . A G 99.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.636;DP=93;Dels=0.00;ExcessHet=3.0103;FS=1.817;HaplotypeScore=59.4161;MLEAC=1;MLEAF=0.500;MQ=38.65;MQ0=8;MQRankSum=0.898;QD=1.12;ReadPosRankSum=-1.684;SOR=1.236 GT:AD:DP:GQ:PL 0/1:66,23:93:99:128,0,937
CP000253.1 2723397 . A G 265.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.570;DP=96;Dels=0.00;ExcessHet=3.0103;FS=3.305;HaplotypeScore=89.0330;MLEAC=1;MLEAF=0.500;MQ=38.27;MQ0=9;MQRankSum=-0.015;QD=2.86;ReadPosRankSum=-2.397;SOR=0.237 GT:AD:DP:GQ:PL 0/1:67,26:96:99:294,0,1153
CP000253.1 2723403 . G A 608.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.726;DP=98;Dels=0.00;ExcessHet=3.0103;FS=4.823;HaplotypeScore=110.4299;MLEAC=1;MLEAF=0.500;MQ=37.61;MQ0=10;MQRankSum=-0.032;QD=6.48;ReadPosRankSum=1.520;SOR=0.314 GT:AD:DP:GQ:PL 0/1:58,36:98:99:637,0,633
CP000253.1 2723406 . T C 234.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.426;DP=96;Dels=0.00;ExcessHet=3.0103;FS=7.104;HaplotypeScore=133.9689;MLEAC=1;MLEAF=0.500;MQ=38.00;MQ0=8;MQRankSum=1.222;QD=2.50;ReadPosRankSum=0.676;SOR=0.205 GT:AD:DP:GQ:PL 0/1:73,21:96:99:263,0,1103
CP000253.1 2723412 . C T 1419.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.164;DP=103;Dels=0.02;ExcessHet=3.0103;FS=8.618;HaplotypeScore=127.6140;MLEAC=1;MLEAF=0.500;MQ=38.05;MQ0=9;MQRankSum=-0.497;QD=14.94;ReadPosRankSum=-1.027;SOR=0.154 GT:AD:DP:GQ:PL 0/1:16,79:101:98:1448,0,98
CP000253.1 2723415 . A G 766.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.013;DP=103;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=124.3921;MLEAC=1;MLEAF=0.500;MQ=38.05;MQ0=9;MQRankSum=0.460;QD=8.07;ReadPosRankSum=1.981;SOR=0.256 GT:AD:DP:GQ:PL 0/1:50,45:101:99:795,0,658
CP000253.1 2723421 . A G 715.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.308;DP=110;Dels=0.02;ExcessHet=3.0103;FS=7.918;HaplotypeScore=108.9087;MLEAC=1;MLEAF=0.500;MQ=38.62;MQ0=11;MQRankSum=0.784;QD=6.88;ReadPosRankSum=1.189;SOR=0.226 GT:AD:DP:GQ:PL 0/1:57,47:108:99:744,0,732
CP000253.1 2723433 . G A 520.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.003;DP=121;Dels=0.00;ExcessHet=3.0103;FS=1.154;HaplotypeScore=107.3726;MLEAC=1;MLEAF=0.500;MQ=38.55;MQ0=12;MQRankSum=1.923;QD=4.49;ReadPosRankSum=2.266;SOR=0.516 GT:AD:DP:GQ:PL 0/1:76,40:121:99:549,0,995
CP000253.1 2723439 . G A 112.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.040;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=151.7572;MLEAC=1;MLEAF=0.500;MQ=38.49;MQ0=12;MQRankSum=-0.738;QD=0.89;ReadPosRankSum=-1.801;SOR=0.615 GT:AD:DP:GQ:PL 0/1:95,32:132:99:141,0,1325
CP000253.1 2723445 . G A 14.91 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.182;DP=148;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=208.8034;MLEAC=1;MLEAF=0.500;MQ=37.82;MQ0=14;MQRankSum=-2.547;QD=0.11;ReadPosRankSum=2.647;SOR=0.673 GT:AD:DP:GQ:PL 0/1:111,24:147:43:43,0,1648
CP000253.1 2723448 . T C 413.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.552;DP=146;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=219.7993;MLEAC=1;MLEAF=0.500;MQ=38.16;MQ0=14;MQRankSum=1.692;QD=3.09;ReadPosRankSum=1.161;SOR=0.730 GT:AD:DP:GQ:PL 0/1:101,33:141:99:442,0,1157
CP000253.1 2723451 . A G 178.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.403;DP=148;Dels=0.03;ExcessHet=3.0103;FS=4.176;HaplotypeScore=213.2206;MLEAC=1;MLEAF=0.500;MQ=37.82;MQ0=14;MQRankSum=1.263;QD=1.33;ReadPosRankSum=-1.283;SOR=0.352 GT:AD:DP:GQ:PL 0/1:104,30:143:99:207,0,1133
CP000253.1 2723457 . A G 199.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.322;DP=156;Dels=0.02;ExcessHet=3.0103;FS=1.148;HaplotypeScore=221.9576;MLEAC=1;MLEAF=0.500;MQ=37.41;MQ0=15;MQRankSum=-0.910;QD=1.39;ReadPosRankSum=-0.529;SOR=1.203 GT:AD:DP:GQ:PL 0/1:111,33:153:99:228,0,1469
CP000253.1 2723475 . A G 1373.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.850;DP=188;Dels=0.02;ExcessHet=3.0103;FS=1.944;HaplotypeScore=175.5126;MLEAC=1;MLEAF=0.500;MQ=39.22;MQ0=16;MQRankSum=3.965;QD=7.67;ReadPosRankSum=0.696;SOR=0.847 GT:AD:DP:GQ:PL 0/1:88,91:184:99:1402,0,756
CP000253.1 2723481 . G A 263.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.219;DP=192;Dels=0.02;ExcessHet=3.0103;FS=3.489;HaplotypeScore=202.0546;MLEAC=1;MLEAF=0.500;MQ=39.48;MQ0=15;MQRankSum=-3.483;QD=1.55;ReadPosRankSum=1.094;SOR=0.979 GT:AD:DP:GQ:PL 0/1:132,38:189:99:292,0,2088
CP000253.1 2723487 . G A 337.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.254;DP=192;Dels=0.00;ExcessHet=3.0103;FS=6.630;HaplotypeScore=258.5268;MLEAC=1;MLEAF=0.500;MQ=39.71;MQ0=15;MQRankSum=-2.375;QD=1.82;ReadPosRankSum=2.782;SOR=1.080 GT:AD:DP:GQ:PL 0/1:134,52:192:99:366,0,2268
CP000253.1 2723493 . G A 1650.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.772;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=233.6396;MLEAC=1;MLEAF=0.500;MQ=39.69;MQ0=15;MQRankSum=4.785;QD=8.34;ReadPosRankSum=1.938;SOR=0.851 GT:AD:DP:GQ:PL 0/1:98,100:203:99:1679,0,810
CP000253.1 2723496 . T C 582.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.380;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=286.9881;MLEAC=1;MLEAF=0.500;MQ=39.78;MQ0=15;MQRankSum=5.379;QD=3.04;ReadPosRankSum=1.359;SOR=0.723 GT:AD:DP:GQ:PL 0/1:146,46:207:99:611,0,1442
CP000253.1 2723499 . G A 592.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.573;DP=215;Dels=0.00;ExcessHet=3.0103;FS=2.780;HaplotypeScore=272.2286;MLEAC=1;MLEAF=0.500;MQ=40.53;MQ0=15;MQRankSum=-4.424;QD=3.06;ReadPosRankSum=1.068;SOR=0.941 GT:AD:DP:GQ:PL 0/1:121,73:215:99:621,0,1817
CP000253.1 2723505 . G A 221.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.791;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=259.7404;MLEAC=1;MLEAF=0.500;MQ=40.75;MQ0=15;MQRankSum=-4.464;QD=1.07;ReadPosRankSum=-0.913;SOR=0.612 GT:AD:DP:GQ:PL 0/1:148,60:217:99:250,0,2593
CP000253.1 2723517 . G A 121.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.271;DP=225;Dels=0.01;ExcessHet=3.0103;FS=0.990;HaplotypeScore=223.1781;MLEAC=1;MLEAF=0.500;MQ=40.98;MQ0=14;MQRankSum=-3.051;QD=0.57;ReadPosRankSum=1.118;SOR=0.578 GT:AD:DP:GQ:PL 0/1:166,46:223:99:150,0,2581
CP000253.1 2723523 . A G 405.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.399;DP=221;Dels=0.01;ExcessHet=3.0103;FS=12.825;HaplotypeScore=236.3418;MLEAC=1;MLEAF=0.500;MQ=41.20;MQ0=14;MQRankSum=-2.685;QD=1.92;ReadPosRankSum=-0.453;SOR=1.473 GT:AD:DP:GQ:PL 0/1:148,63:219:99:434,0,2028
CP000253.1 2723529 . A G 224.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.214;DP=228;Dels=0.00;ExcessHet=3.0103;FS=1.299;HaplotypeScore=222.4760;MLEAC=1;MLEAF=0.500;MQ=41.92;MQ0=13;MQRankSum=-4.618;QD=1.04;ReadPosRankSum=1.349;SOR=0.568 GT:AD:DP:GQ:PL 0/1:165,52:228:99:253,0,2689
CP000253.1 2723535 . A G 114.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.440;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=204.5387;MLEAC=1;MLEAF=0.500;MQ=42.22;MQ0=13;MQRankSum=-2.396;QD=0.54;ReadPosRankSum=-0.275;SOR=0.578 GT:AD:DP:GQ:PL 0/1:169,43:230:99:143,0,2541
CP000253.1 2723541 . G A 309.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.202;DP=236;Dels=0.00;ExcessHet=3.0103;FS=3.703;HaplotypeScore=183.1432;MLEAC=1;MLEAF=0.500;MQ=42.66;MQ0=13;MQRankSum=-4.934;QD=1.34;ReadPosRankSum=2.079;SOR=0.445 GT:AD:DP:GQ:PL 0/1:172,59:235:99:338,0,2910
CP000253.1 2723547 . G A 302.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.216;DP=240;Dels=0.02;ExcessHet=3.0103;FS=0.000;HaplotypeScore=204.5200;MLEAC=1;MLEAF=0.500;MQ=43.02;MQ0=13;MQRankSum=-2.776;QD=1.31;ReadPosRankSum=-0.071;SOR=0.923 GT:AD:DP:GQ:PL 0/1:180,52:236:99:331,0,2826
CP000253.1 2723553 . G A 379.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.199;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=233.4428;MLEAC=1;MLEAF=0.500;MQ=43.53;MQ0=11;MQRankSum=-4.131;QD=1.64;ReadPosRankSum=1.697;SOR=0.529 GT:AD:DP:GQ:PL 0/1:175,57:242:99:408,0,2793
CP000253.1 2723562 . G A 311.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.696;DP=243;Dels=0.00;ExcessHet=3.0103;FS=13.305;HaplotypeScore=247.4941;MLEAC=1;MLEAF=0.500;MQ=43.66;MQ0=14;MQRankSum=-3.596;QD=1.34;ReadPosRankSum=-0.037;SOR=0.647 GT:AD:DP:GQ:PL 0/1:183,50:243:99:340,0,3280
CP000253.1 2723571 . G T 246.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.815;DP=245;Dels=0.00;ExcessHet=3.0103;FS=21.620;HaplotypeScore=192.2163;MLEAC=1;MLEAF=0.500;MQ=44.57;MQ0=14;MQRankSum=3.197;QD=1.27;ReadPosRankSum=-4.164;SOR=1.595 GT:AD:DP:GQ:PL 0/1:171,23:245:99:275,0,2890
CP000253.1 2723583 . G A 518.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.223;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.632;HaplotypeScore=175.3400;MLEAC=1;MLEAF=0.500;MQ=45.09;MQ0=13;MQRankSum=0.151;QD=2.20;ReadPosRankSum=-2.655;SOR=0.625 GT:AD:DP:GQ:PL 0/1:193,43:240:99:547,0,3171
CP000253.1 2723589 . A T 2141.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.199;DP=242;Dels=0.00;ExcessHet=3.0103;FS=6.037;HaplotypeScore=211.6555;MLEAC=1;MLEAF=0.500;MQ=45.17;MQ0=13;MQRankSum=10.139;QD=10.66;ReadPosRankSum=-3.939;SOR=0.408 GT:AD:DP:GQ:PL 0/1:106,95:242:99:2170,0,1146
CP000253.1 2723595 . G A 356.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.873;DP=228;Dels=0.00;ExcessHet=3.0103;FS=1.231;HaplotypeScore=195.7026;MLEAC=1;MLEAF=0.500;MQ=45.86;MQ0=12;MQRankSum=-7.859;QD=1.65;ReadPosRankSum=2.971;SOR=0.821 GT:AD:DP:GQ:PL 0/1:150,66:228:99:385,0,3314
CP000253.1 2723601 . G A 398.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.688;DP=227;Dels=0.00;ExcessHet=3.0103;FS=1.625;HaplotypeScore=145.8215;MLEAC=1;MLEAF=0.500;MQ=46.08;MQ0=13;MQRankSum=-5.043;QD=1.82;ReadPosRankSum=2.774;SOR=0.963 GT:AD:DP:GQ:PL 0/1:162,57:227:99:427,0,3274
CP000253.1 2723607 . A G 127.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;DP=228;Dels=0.00;ExcessHet=3.0103;FS=6.795;HaplotypeScore=199.1466;MLEAC=1;MLEAF=0.500;MQ=46.02;MQ0=14;MQRankSum=-3.046;QD=0.59;ReadPosRankSum=1.791;SOR=1.422 GT:AD:DP:GQ:PL 0/1:183,33:228:99:156,0,3323
CP000253.1 2723613 . A G 109.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.030;DP=222;Dels=0.00;ExcessHet=3.0103;FS=13.797;HaplotypeScore=162.5628;MLEAC=1;MLEAF=0.500;MQ=46.55;MQ0=14;MQRankSum=-0.330;QD=0.51;ReadPosRankSum=0.335;SOR=2.036 GT:AD:DP:GQ:PL 0/1:183,31:222:99:138,0,3200
CP000253.1 2723616 . G A 860.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.314;DP=216;Dels=0.00;ExcessHet=3.0103;FS=14.109;HaplotypeScore=198.2365;MLEAC=1;MLEAF=0.500;MQ=47.04;MQ0=13;MQRankSum=-2.758;QD=4.08;ReadPosRankSum=-0.436;SOR=0.573 GT:AD:DP:GQ:PL 0/1:151,60:216:99:889,0,2789
CP000253.1 2723619 . G A 307.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.998;DP=218;Dels=0.00;ExcessHet=3.0103;FS=3.138;HaplotypeScore=190.1173;MLEAC=1;MLEAF=0.500;MQ=47.76;MQ0=12;MQRankSum=-4.278;QD=1.47;ReadPosRankSum=2.728;SOR=0.986 GT:AD:DP:GQ:PL 0/1:165,44:218:99:336,0,3077
CP000253.1 2723625 . G A 1619.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=3.891;DP=214;Dels=0.00;ExcessHet=3.0103;FS=15.494;HaplotypeScore=211.7787;MLEAC=1;MLEAF=0.500;MQ=47.72;MQ0=12;MQRankSum=-4.013;QD=8.02;ReadPosRankSum=-1.733;SOR=0.288 GT:AD:DP:GQ:PL 0/1:107,95:214:99:1648,0,1553
CP000253.1 2723628 . T C 469.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.141;DP=205;Dels=0.00;ExcessHet=3.0103;FS=39.508;HaplotypeScore=225.9352;MLEAC=1;MLEAF=0.500;MQ=47.98;MQ0=13;MQRankSum=2.726;QD=2.33;ReadPosRankSum=-4.183;SOR=2.239 GT:AD:DP:GQ:PL 0/1:172,30:204:99:498,0,3308
CP000253.1 2723634 . G A 137.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.312;DP=200;Dels=0.00;ExcessHet=3.0103;FS=1.550;HaplotypeScore=205.8996;MLEAC=1;MLEAF=0.500;MQ=48.65;MQ0=12;MQRankSum=-6.572;QD=0.71;ReadPosRankSum=1.993;SOR=0.534 GT:AD:DP:GQ:PL 0/1:158,37:200:99:166,0,3443
CP000253.1 2723643 . G T 503.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.236;DP=201;Dels=0.00;ExcessHet=3.0103;FS=30.369;HaplotypeScore=152.5884;MLEAC=1;MLEAF=0.500;MQ=48.86;MQ0=12;MQRankSum=2.354;QD=2.83;ReadPosRankSum=-1.969;SOR=1.540 GT:AD:DP:GQ:PL 0/1:143,35:201:99:532,0,2556
CP000253.1 2723655 . A G 98.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.130;DP=199;Dels=0.00;ExcessHet=3.0103;FS=13.673;HaplotypeScore=128.4098;MLEAC=1;MLEAF=0.500;MQ=49.82;MQ0=12;MQRankSum=-4.780;QD=0.52;ReadPosRankSum=1.746;SOR=2.180 GT:AD:DP:GQ:PL 0/1:159,31:199:99:127,0,3379
CP000253.1 2723661 . G A 569.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.739;DP=195;Dels=0.00;ExcessHet=3.0103;FS=41.153;HaplotypeScore=247.4642;MLEAC=1;MLEAF=0.500;MQ=50.44;MQ0=11;MQRankSum=1.560;QD=3.31;ReadPosRankSum=1.179;SOR=2.238 GT:AD:DP:GQ:PL 0/1:135,37:195:99:598,0,2412
CP000253.1 2723688 . A G 1102.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.236;DP=130;Dels=0.00;ExcessHet=3.0103;FS=4.357;HaplotypeScore=309.0108;MLEAC=1;MLEAF=0.500;MQ=56.15;MQ0=2;MQRankSum=-2.429;QD=8.75;ReadPosRankSum=2.246;SOR=0.483 GT:AD:DP:GQ:PL 0/1:72,54:130:99:1131,0,1564
CP000253.1 2723691 . G A 1177.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.456;DP=141;Dels=0.00;ExcessHet=3.0103;FS=10.734;HaplotypeScore=217.8144;MLEAC=1;MLEAF=0.500;MQ=56.15;MQ0=2;MQRankSum=-1.460;QD=8.60;ReadPosRankSum=1.706;SOR=0.854 GT:AD:DP:GQ:PL 0/1:77,60:141:99:1206,0,1688
CP000253.1 2723703 . C G 1622.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.423;DP=147;Dels=0.00;ExcessHet=3.0103;FS=6.420;HaplotypeScore=46.0614;MLEAC=1;MLEAF=0.500;MQ=56.64;MQ0=2;MQRankSum=-1.330;QD=11.76;ReadPosRankSum=-0.033;SOR=0.757 GT:AD:DP:GQ:PL 0/1:63,75:147:99:1651,0,1352
CP000253.1 2723706 . A G 1787.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.766;DP=148;Dels=0.00;ExcessHet=3.0103;FS=5.416;HaplotypeScore=49.8290;MLEAC=1;MLEAF=0.500;MQ=56.65;MQ0=2;MQRankSum=-0.625;QD=12.24;ReadPosRankSum=0.142;SOR=0.699 GT:AD:DP:GQ:PL 0/1:72,74:148:99:1816,0,1411
CP000253.1 2723721 . G A 1654.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.923;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6243;MLEAC=1;MLEAF=0.500;MQ=57.14;MQ0=3;MQRankSum=-0.885;QD=11.57;ReadPosRankSum=-0.497;SOR=0.722 GT:AD:DP:GQ:PL 0/1:60,83:149:99:1683,0,1091
CP000253.1 2723793 . G A 502.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.500;DP=166;Dels=0.00;ExcessHet=3.0103;FS=1.709;HaplotypeScore=48.8737;MLEAC=1;MLEAF=0.500;MQ=58.16;MQ0=2;MQRankSum=-1.103;QD=3.10;ReadPosRankSum=2.350;SOR=0.829 GT:AD:DP:GQ:PL 0/1:123,39:166:99:531,0,2656
CP000253.1 2723806 . C T 446.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.047;DP=169;Dels=0.00;ExcessHet=3.0103;FS=0.723;HaplotypeScore=57.5421;MLEAC=1;MLEAF=0.500;MQ=58.26;MQ0=2;MQRankSum=-1.684;QD=2.66;ReadPosRankSum=1.754;SOR=0.593 GT:AD:DP:GQ:PL 0/1:133,35:169:99:475,0,2715
CP000253.1 2723811 . G A 228.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.711;DP=169;Dels=0.00;ExcessHet=3.0103;FS=1.897;HaplotypeScore=53.4526;MLEAC=1;MLEAF=0.500;MQ=58.50;MQ0=2;MQRankSum=-2.851;QD=1.36;ReadPosRankSum=1.955;SOR=0.577 GT:AD:DP:GQ:PL 0/1:141,27:169:99:257,0,3050
CP000253.1 2723817 . G A 302.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.039;DP=179;Dels=0.00;ExcessHet=3.0103;FS=1.764;HaplotypeScore=56.8789;MLEAC=1;MLEAF=0.500;MQ=58.58;MQ0=2;MQRankSum=-3.010;QD=1.70;ReadPosRankSum=1.691;SOR=0.626 GT:AD:DP:GQ:PL 0/1:151,27:179:99:331,0,3420
CP000253.1 2726137 . T C 1341.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6180;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.74;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:93:1370,93,0
CP000253.1 2726158 . G A 1379.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.62;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:96:1408,96,0
CP000253.1 2726163 . T A 1344.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:93:1373,93,0
CP000253.1 2726170 . G A 1300.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:90:1329,90,0
CP000253.1 2726293 . G A 1595.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1624,111,0
CP000253.1 2726458 . G A 520.22 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.667;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.68;ReadPosRankSum=-0.869;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,23:24:4:547,4,0
CP000253.1 2726578 . T G 426.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:33:455,33,0
CP000253.1 2726893 . A G 1570.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:66:99:1599,111,0
CP000253.1 2727315 . A G 5808.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4942;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,242:242:99:5837,412,0
CP000253.1 2727326 . C T 5795.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6247;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.35;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,238:239:99:5824,403,0
CP000253.1 2727327 . A G 5831.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8270;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.61;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,237:240:99:5860,412,0
CP000253.1 2727540 . A G 3418.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8492;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,133:134:99:3447,247,0
CP000253.1 2727608 . A G 2595.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6422;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.49;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2624,187,0
CP000253.1 2727646 . G T 2113.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.723;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.30;ReadPosRankSum=1.558;SOR=0.400 GT:AD:DP:GQ:PL 1/1:2,85:87:99:2142,150,0
CP000253.1 2727751 . C T 1539.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.516;DP=61;Dels=0.00;ExcessHet=3.0103;FS=3.832;HaplotypeScore=9.4133;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.10;ReadPosRankSum=0.588;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,58:61:89:1568,89,0
CP000253.1 2727837 . T A 1647.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.97;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1676,117,0
CP000253.1 2727937 . A G 2839.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4425;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.66;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2868,199,0
CP000253.1 2728168 . T C 2331.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6777;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.09;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2360,163,0
CP000253.1 2728221 . G A 2424.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8930;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2453,169,0
CP000253.1 2728339 . C A 1753.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.7425;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1782,126,0
CP000253.1 2728581 . T C 3166.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.601;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3220;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.81;ReadPosRankSum=-0.009;SOR=0.873 GT:AD:DP:GQ:PL 1/1:2,131:134:99:3195,187,0
CP000253.1 2728651 . T G 3820.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.771;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5635;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.74;ReadPosRankSum=-0.246;SOR=0.422 GT:AD:DP:GQ:PL 1/1:3,165:168:99:3849,251,0
CP000253.1 2728755 . C T 5309.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.7902;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,206:207:99:5338,376,0
CP000253.1 2729595 . C T 3677.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0811;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.20;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,152:153:99:3706,259,0
CP000253.1 2729992 . T C 2532.77 . AC=2;AF=1.00;AN=2;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1989;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.89;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,106:107:99:2561,181,0
CP000253.1 2730043 . A T 2455.77 . AC=2;AF=1.00;AN=2;DP=95;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6387;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2484,175,0
CP000253.1 2730258 . T C 2416.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3097;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.93;ReadPosRankSum=1.201;SOR=0.315 GT:AD:DP:GQ:PL 1/1:1,100:102:99:2445,172,0
CP000253.1 2730285 . C T 2663.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9472;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.00;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,111:111:99:2692,187,0
CP000253.1 2730296 . A G 2853.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.930;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9299;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.01;ReadPosRankSum=-0.587;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,123:124:99:2882,199,0
CP000253.1 2730338 . A G 2770.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.90;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2799,196,0
CP000253.1 2730366 . A T 2974.77 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3645;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3003,205,0
CP000253.1 2731089 . A G 1864.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.086;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6099;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.47;ReadPosRankSum=-1.115;SOR=0.718 GT:AD:DP:GQ:PL 1/1:2,81:84:94:1893,94,0
CP000253.1 2731190 . C T 1684.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.609;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.60;ReadPosRankSum=1.029;SOR=0.746 GT:AD:DP:GQ:PL 1/1:2,76:78:79:1713,79,0
CP000253.1 2731642 . A G 101.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:129,9,0
CP000253.1 2731664 . A G 142.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.29;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:170,12,0
CP000253.1 2731699 . T G 185.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.66;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:214,15,0
CP000253.1 2731705 . T C 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 2731713 . T C 186.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:215,15,0
CP000253.1 2731741 . T A 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2731811 . A T 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2731830 . A T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2732014 . G A 1707.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.89;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1736,117,0
CP000253.1 2732131 . C T 884.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:63:913,63,0
CP000253.1 2732161 . T A 678.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:48:707,48,0
CP000253.1 2732167 . C T 633.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:45:662,45,0
CP000253.1 2732992 . T C 4351.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.693;DP=187;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.4341;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.78;ReadPosRankSum=-1.108;SOR=0.271 GT:AD:DP:GQ:PL 1/1:1,182:185:99:4380,310,0
CP000253.1 2733118 . T A 4654.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.827;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.4300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.30;ReadPosRankSum=1.299;SOR=0.382 GT:AD:DP:GQ:PL 1/1:1,183:185:99:4683,334,0
CP000253.1 2733154 . T C 3993.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.587;DP=160;Dels=0.00;ExcessHet=3.0103;FS=3.039;HaplotypeScore=20.5247;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.44;ReadPosRankSum=0.938;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,156:160:99:4022,290,0
CP000253.1 2733226 . G A 4650.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.5091;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,182:185:99:4679,331,0
CP000253.1 2733762 . T G 1885.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.28;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1914,135,0
CP000253.1 2734156 . G T 843.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.22;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:63:872,63,0
CP000253.1 2734161 . A C 807.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:60:836,60,0
CP000253.1 2734233 . G T 295.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:24:324,24,0
CP000253.1 2734295 . T G 268.78 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8899;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:24:297,24,0
CP000253.1 2734504 . A G 172.90 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:15:201,15,0
CP000253.1 2734593 . A T 493.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:522,36,0
CP000253.1 2735546 . G A 2934.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8790;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.06;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,122:123:99:2963,205,0
CP000253.1 2735623 . T A 3540.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9361;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,149:150:99:3569,247,0
CP000253.1 2736064 . C T 932.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8273;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.92;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:40:66:961,66,0
CP000253.1 2736188 . A G 1026.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:72:1055,72,0
CP000253.1 2736229 . C T 1069.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:75:1098,75,0
CP000253.1 2736304 . T G 680.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.23;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:51:709,51,0
CP000253.1 2736510 . C T 4203.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4164;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,188:189:99:4232,289,0
CP000253.1 2736799 . C T 644.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.88;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:673,48,0
CP000253.1 2736803 . T G 617.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.88;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:45:646,45,0
CP000253.1 2736928 . C T 267.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:21:296,21,0
CP000253.1 2737345 . G A 1002.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9734;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:72:1031,72,0
CP000253.1 2737368 . A G 1562.77 . AC=2;AF=1.00;AN=2;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=1.355 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1591,114,0
CP000253.1 2737426 . T A 3237.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.811;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.70;ReadPosRankSum=1.638;SOR=0.397 GT:AD:DP:GQ:PL 1/1:1,125:126:99:3266,232,0
CP000253.1 2738267 . G A 5116.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.770;DP=214;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.1271;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.91;ReadPosRankSum=1.328;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,213:214:99:5145,339,0
CP000253.1 2738325 . C A 5187.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8065;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,215:215:99:5216,364,0
CP000253.1 2738419 . A G 5119.77 . AC=2;AF=1.00;AN=2;DP=187;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7287;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=27.53;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,186:187:99:5148,370,0
CP000253.1 2738993 . T C 3462.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.84;ReadPosRankSum=0.419;SOR=0.309 GT:AD:DP:GQ:PL 1/1:1,128:131:99:3491,250,0
CP000253.1 2739542 . C A 5776.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9537;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.45;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,227:227:99:5805,412,0
CP000253.1 2740308 . C T 6554.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5383;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.65;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,246:249:99:6583,476,0
CP000253.1 2740437 . A C 6705.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.857;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4746;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.15;ReadPosRankSum=-0.056;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,246:249:99:6734,488,0
CP000253.1 2740572 . C A 5730.77 . AC=2;AF=1.00;AN=2;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0430;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.03;SOR=0.999 GT:AD:DP:GQ:PL 1/1:0,229:230:99:5759,409,0
CP000253.1 2740824 . A T 2377.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.9199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,92:93:99:2406,169,0
CP000253.1 2741176 . A G 1919.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.66;SOR=1.073 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1948,141,0
CP000253.1 2741329 . C T 3098.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2389;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3127,223,0
CP000253.1 2741371 . G T 3342.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.902;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5404;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-1.579;SOR=0.235 GT:AD:DP:GQ:PL 1/1:1,134:135:99:3371,238,0
CP000253.1 2742019 . T C 5777.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.740;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.0879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.63;ReadPosRankSum=0.200;SOR=1.099 GT:AD:DP:GQ:PL 1/1:1,216:217:99:5806,421,0
CP000253.1 2742081 . A G 4452.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.915;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0663;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.66;ReadPosRankSum=0.700;SOR=1.447 GT:AD:DP:GQ:PL 1/1:1,160:162:99:4481,328,0
CP000253.1 2742634 . C G 2926.77 . AC=2;AF=1.00;AN=2;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,122:122:99:2955,211,0
CP000253.1 2742815 . A G 3891.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9104;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.02;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,162:164:99:3920,277,0
CP000253.1 2742981 . C A 3081.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.499;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9040;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.85;ReadPosRankSum=-0.020;SOR=0.105 GT:AD:DP:GQ:PL 1/1:2,122:126:99:3110,226,0
CP000253.1 2743150 . A C 2618.77 . AC=2;AF=1.00;AN=2;DP=108;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3425;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,108:108:99:2647,187,0
CP000253.1 2743414 . T C 2506.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.67;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2535,181,0
CP000253.1 2743696 . T G 4583.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.6432;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,190:191:99:4612,325,0
CP000253.1 2744447 . T C 634.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.16;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:45:663,45,0
CP000253.1 2744463 . A C 585.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:614,42,0
CP000253.1 2744949 . G A 3921.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,168:168:99:3950,277,0
CP000253.1 2745439 . C A 4774.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=1.102 GT:AD:DP:GQ:PL 1/1:0,189:190:99:4803,337,0
CP000253.1 2745768 . T C 2659.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.009;DP=107;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.57;ReadPosRankSum=-1.635;SOR=0.344 GT:AD:DP:GQ:PL 1/1:1,103:107:99:2688,190,0
CP000253.1 2746086 . C T 1450.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2427;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.90;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1479,108,0
CP000253.1 2746146 . T C 246.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.42;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:21:275,21,0
CP000253.1 2746231 . C T 483.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.88;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:36:512,36,0
CP000253.1 2746255 . G A 487.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:36:516,36,0
CP000253.1 2746314 . C T 488.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9469;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:36:517,36,0
CP000253.1 2746355 . C T 451.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:20:33:480,33,0
CP000253.1 2746371 . G T 455.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.70;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:484,33,0
CP000253.1 2746569 . T C 2120.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.66;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2149,150,0
CP000253.1 2746974 . G C 1640.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.81;SOR=1.316 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1669,120,0
CP000253.1 2747058 . A T 871.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.973;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.1059;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.22;ReadPosRankSum=1.349;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,35:36:63:900,63,0
CP000253.1 2747356 . C T 769.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.64;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:54:798,54,0
CP000253.1 2747396 . T C 582.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:611,42,0
CP000253.1 2747399 . C T 585.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.53;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:614,42,0
CP000253.1 2747465 . A G 310.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:24:339,24,0
CP000253.1 2747654 . T C 2070.77 . AC=2;AF=1.00;AN=2;DP=82;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0985;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=1.264 GT:AD:DP:GQ:PL 1/1:0,81:82:99:2099,150,0
CP000253.1 2747828 . A G 3614.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1462;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,164:165:99:3643,247,0
CP000253.1 2747908 . A G 2553.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7824;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2582,178,0
CP000253.1 2747988 . A T 1023.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1052,75,0
CP000253.1 2748239 . T C 4579.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,174:175:99:4608,328,0
CP000253.1 2748297 . C T 5153.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.90;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5182,364,0
CP000253.1 2748332 . G A 4717.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5970;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.70;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,191:193:99:4746,337,0
CP000253.1 2748396 . T C 5167.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.21;ReadPosRankSum=1.733;SOR=0.314 GT:AD:DP:GQ:PL 1/1:1,204:205:99:5196,367,0
CP000253.1 2748416 . T C 5233.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8529;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,203:205:99:5262,376,0
CP000253.1 2748424 . C T 5342.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,205:205:99:5371,379,0
CP000253.1 2748430 . T C 5442.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6415;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,210:210:99:5471,388,0
CP000253.1 2748438 . G A 5544.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.55;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,217:219:99:5573,397,0
CP000253.1 2748538 . G A 6016.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.8597;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,229:236:99:6045,439,0
CP000253.1 2748710 . G T 5165.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.4296;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.20;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,205:206:99:5194,370,0
CP000253.1 2748798 . T G 4865.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.742;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.1782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.45;ReadPosRankSum=-0.348;SOR=0.390 GT:AD:DP:GQ:PL 1/1:1,198:200:99:4894,324,0
CP000253.1 2748848 . C T 4296.77 . AC=2;AF=1.00;AN=2;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0500;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4325,301,0
CP000253.1 2748895 . T A 3106.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3135,217,0
CP000253.1 2748964 . T A 2038.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9987;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.71;SOR=0.947 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2067,144,0
CP000253.1 2749044 . C T 1031.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=1.387 GT:AD:DP:GQ:PL 1/1:0,39:39:75:1060,75,0
CP000253.1 2749139 . T A 266.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:295,21,0
CP000253.1 2749235 . T A 1053.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4001;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.95;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:75:1082,75,0
CP000253.1 2749247 . T C 1261.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2646;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1290,90,0
CP000253.1 2749269 . C T 1543.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.6812;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:67:99:1572,108,0
CP000253.1 2749629 . A G 1198.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4453;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:53:84:1227,84,0
CP000253.1 2749698 . C A 1168.77 . AC=2;AF=1.00;AN=2;DP=50;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:84:1197,84,0
CP000253.1 2750089 . G A 5468.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7470;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,224:228:99:5497,379,0
CP000253.1 2750358 . A G 3705.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.930;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3111;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.38;ReadPosRankSum=1.554;SOR=0.422 GT:AD:DP:GQ:PL 1/1:1,145:146:99:3734,265,0
CP000253.1 2750721 . T C 1355.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6643;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:96:1384,96,0
CP000253.1 2751145 . C T 2857.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2601;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2886,199,0
CP000253.1 2751191 . G T 2518.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2547,181,0
CP000253.1 2751193 . T A 2542.77 . AC=2;AF=1.00;AN=2;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8965;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,101:101:99:2571,181,0
CP000253.1 2751205 . T C 2356.77 . AC=2;AF=1.00;AN=2;DP=91;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9282;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2385,169,0
CP000253.1 2751223 . A C 2222.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6678;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2251,160,0
CP000253.1 2751235 . A G 2257.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9976;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.66;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2286,163,0
CP000253.1 2751244 . G A 2043.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.87;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:80:99:2072,150,0
CP000253.1 2751379 . A G 2225.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8464;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2254,157,0
CP000253.1 2751627 . G C 1900.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2773;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,80:81:99:1929,132,0
CP000253.1 2751634 . A G 1732.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.1683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:75:99:1761,123,0
CP000253.1 2751694 . G A 804.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.39;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:60:833,60,0
CP000253.1 2751762 . T C 806.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.41;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:57:835,57,0
CP000253.1 2751781 . C T 884.77 . AC=2;AF=1.00;AN=2;DP=37;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.91;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,37:37:63:913,63,0
CP000253.1 2751823 . G A 1277.77 . AC=2;AF=1.00;AN=2;DP=53;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:90:1306,90,0
CP000253.1 2751859 . G T 1280.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:90:1309,90,0
CP000253.1 2751912 . A T 1697.77 . AC=2;AF=1.00;AN=2;DP=67;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.34;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1726,120,0
CP000253.1 2752263 . G T 1835.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8244;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1864,129,0
CP000253.1 2752639 . T C 1719.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0110;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.24;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1748,120,0
CP000253.1 2753353 . A G 3615.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9915;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,155:158:99:3644,259,0
CP000253.1 2754625 . T G 4172.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.514;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7982;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.29;ReadPosRankSum=0.432;SOR=0.808 GT:AD:DP:GQ:PL 1/1:2,163:165:99:4201,301,0
CP000253.1 2754651 . C A 4264.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.774;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.16;ReadPosRankSum=-1.137;SOR=0.506 GT:AD:DP:GQ:PL 1/1:1,162:164:99:4293,307,0
CP000253.1 2754678 . G T 4304.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8476;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.25;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4333,310,0
CP000253.1 2754707 . C T 4815.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.725;DP=184;Dels=0.00;ExcessHet=3.0103;FS=3.058;HaplotypeScore=14.5436;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.17;ReadPosRankSum=1.695;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,183:184:99:4844,346,0
CP000253.1 2754742 . C T 5921.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0152;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.09;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,227:228:99:5950,427,0
CP000253.1 2754752 . C T 5202.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.26;SOR=0.882 GT:AD:DP:GQ:PL 1/1:0,206:206:99:5231,370,0
CP000253.1 2754754 . C T 5315.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9591;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,205:205:99:5344,379,0
CP000253.1 2754821 . T G 5827.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.5575;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,242:242:99:5856,412,0
CP000253.1 2754849 . T C 5684.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6939;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,243:244:99:5713,400,0
CP000253.1 2754869 . C T 5602.77 . AC=2;AF=1.00;AN=2;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7970;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.54;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,238:238:99:5631,391,0
CP000253.1 2754873 . C T 5612.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7864;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,238:239:99:5641,394,0
CP000253.1 2754879 . T C 5641.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6625;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.70;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,238:239:99:5670,394,0
CP000253.1 2754986 . A C 4285.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.838;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.94;ReadPosRankSum=-0.658;SOR=0.305 GT:AD:DP:GQ:PL 1/1:1,178:180:99:4314,304,0
CP000253.1 2755005 . C T 4039.77 . AC=2;AF=1.00;AN=2;DP=161;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.5842;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.09;SOR=1.116 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4068,289,0
CP000253.1 2755010 . C T 3921.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3950,280,0
CP000253.1 2755050 . A C 2812.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.014;DP=104;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.31;ReadPosRankSum=1.279;SOR=1.420 GT:AD:DP:GQ:PL 1/1:1,102:103:99:2841,205,0
CP000253.1 2755069 . G A 2701.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2477;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.85;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,97:97:99:2730,199,0
CP000253.1 2755090 . A T 2046.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9575;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.29;SOR=1.578 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2075,150,0
CP000253.1 2755747 . G T 5173.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.906;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0873;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.62;ReadPosRankSum=-1.416;SOR=0.246 GT:AD:DP:GQ:PL 1/1:1,218:219:99:5202,358,0
CP000253.1 2756039 . A G 3272.77 . AC=2;AF=1.00;AN=2;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0385;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=0.983 GT:AD:DP:GQ:PL 1/1:0,131:131:99:3301,235,0
CP000253.1 2756384 . C T 5851.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.895;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3660;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.78;ReadPosRankSum=1.520;SOR=0.544 GT:AD:DP:GQ:PL 1/1:1,226:229:99:5880,418,0
CP000253.1 2756389 . C T 5963.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.2899;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,228:228:99:5992,424,0
CP000253.1 2756552 . C T 6709.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.003;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7502;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.28;ReadPosRankSum=1.331;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,245:248:99:6738,485,0
CP000253.1 2756570 . T C 6710.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2051;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.95;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6739,485,0
CP000253.1 2756594 . A T 6973.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.7877;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.01;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,249:249:99:7002,500,0
CP000253.1 2756604 . C A 6741.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.41;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,246:246:99:6770,485,0
CP000253.1 2756639 . A G 6137.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0375;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.57;SOR=0.973 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6166,442,0
CP000253.1 2756645 . C T 6447.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.6607;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6476,466,0
CP000253.1 2757285 . G A 3321.77 . AC=2;AF=1.00;AN=2;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.95;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,128:129:99:3350,238,0
CP000253.1 2757831 . T C 1249.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:90:1278,90,0
CP000253.1 2757832 . G A 1232.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.23;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:48:90:1261,90,0
CP000253.1 2758005 . A T 2478.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2507,172,0
CP000253.1 2758070 . C G 2954.77 . AC=2;AF=1.00;AN=2;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8324;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.22;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,122:123:99:2983,208,0
CP000253.1 2758257 . T C 2513.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:105:99:2542,178,0
CP000253.1 2758368 . C T 2504.77 . AC=2;AF=1.00;AN=2;DP=105;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6096;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,104:105:99:2533,178,0
CP000253.1 2758775 . A G 1813.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.96;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:80:99:1842,126,0
CP000253.1 2758797 . G T 1809.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.20;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1838,126,0
CP000253.1 2759044 . T C 703.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:51:732,51,0
CP000253.1 2759056 . A T 730.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:54:759,54,0
CP000253.1 2759185 . A G 398.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.92;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:30:427,30,0
CP000253.1 2759293 . A G 1099.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.44;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:78:1128,78,0
CP000253.1 2759332 . G A 1149.77 . AC=2;AF=1.00;AN=2;DP=48;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.95;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:81:1178,81,0
CP000253.1 2759464 . A C 897.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.90;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:63:926,63,0
CP000253.1 2759488 . G A 1040.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.14;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:72:1069,72,0
CP000253.1 2759588 . C A 455.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.79;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:33:484,33,0
CP000253.1 2759710 . G A 137.03 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.84;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:12:165,12,0
CP000253.1 2759728 . C T 52.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0
CP000253.1 2759731 . G T 47.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:75,6,0
CP000253.1 2760079 . T A 3274.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4743;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3303,241,0
CP000253.1 2760082 . T C 3078.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.570;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.9082;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.63;ReadPosRankSum=-0.028;SOR=0.940 GT:AD:DP:GQ:PL 1/1:1,124:125:99:3107,226,0
CP000253.1 2760313 . T C 4860.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.704;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.2490;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.86;ReadPosRankSum=1.179;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,187:188:99:4889,361,0
CP000253.1 2760385 . A G 5058.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.754;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.9037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.77;ReadPosRankSum=0.128;SOR=0.257 GT:AD:DP:GQ:PL 1/1:1,188:189:99:5087,370,0
CP000253.1 2760430 . C T 4812.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.819;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7761;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.89;ReadPosRankSum=-0.774;SOR=0.595 GT:AD:DP:GQ:PL 1/1:1,178:179:99:4841,349,0
CP000253.1 2760432 . A T 4897.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.6133;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.52;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,178:179:99:4926,358,0
CP000253.1 2760438 . T C 4762.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.430;DP=178;Dels=0.00;ExcessHet=3.0103;FS=3.594;HaplotypeScore=27.1533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.06;ReadPosRankSum=0.237;SOR=0.568 GT:AD:DP:GQ:PL 1/1:2,174:178:99:4791,346,0
CP000253.1 2760439 . A G 4657.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.692;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.1533;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.17;ReadPosRankSum=0.058;SOR=0.324 GT:AD:DP:GQ:PL 1/1:1,177:178:99:4686,340,0
CP000253.1 2760980 . C T 6154.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.882;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3267;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.76;ReadPosRankSum=0.693;SOR=0.525 GT:AD:DP:GQ:PL 1/1:1,229:231:99:6183,442,0
CP000253.1 2761124 . C T 5238.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.144;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4260;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.46;ReadPosRankSum=0.228;SOR=0.472 GT:AD:DP:GQ:PL 1/1:3,195:198:99:5267,379,0
CP000253.1 2761464 . A C 4556.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.9813;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.46;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4585,328,0
CP000253.1 2761708 . C T 6706.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3999;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6735,485,0
CP000253.1 2761762 . A C 6328.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3239;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6357,454,0
CP000253.1 2761813 . C T 6653.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.2186;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.83;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6682,476,0
CP000253.1 2762014 . C T 6483.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.1637;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.90;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,241:242:99:6512,473,0
CP000253.1 2762035 . A T 6565.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.4744;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.80;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,245:246:99:6594,476,0
CP000253.1 2762174 . A G 5553.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3083;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.63;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,201:202:99:5582,409,0
CP000253.1 2762204 . T C 5758.77 . AC=2;AF=1.00;AN=2;DP=207;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5623;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,207:207:99:5787,418,0
CP000253.1 2762290 . C T 5758.77 . AC=2;AF=1.00;AN=2;DP=210;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3107;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.42;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,210:210:99:5787,415,0
CP000253.1 2762350 . C T 5599.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.2687;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.86;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,201:202:99:5628,406,0
CP000253.1 2762363 . A G 5190.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5351;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.84;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,180:182:99:5219,379,0
CP000253.1 2762364 . C T 5211.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5351;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.64;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,182:182:99:5240,376,0
CP000253.1 2762365 . C T 5226.77 . AC=2;AF=1.00;AN=2;DP=182;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4018;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.72;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,182:182:99:5255,376,0
CP000253.1 2762377 . A G 5123.77 . AC=2;AF=1.00;AN=2;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.41;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,194:196:99:5152,379,0
CP000253.1 2762431 . G T 5064.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.5036;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.38;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,192:192:99:5093,370,0
CP000253.1 2762466 . A T 5850.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.7839;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.73;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,211:212:99:5879,424,0
CP000253.1 2762566 . G T 5479.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.8891;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.60;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,206:206:99:5508,394,0
CP000253.1 2762584 . T C 5468.77 . AC=2;AF=1.00;AN=2;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.7289;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.17;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,209:211:99:5497,394,0
CP000253.1 2762743 . G A 6745.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.9940;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.20;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,248:250:99:6774,485,0
CP000253.1 2762868 . C T 6934.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.42;SOR=0.989 GT:AD:DP:GQ:PL 1/1:0,244:247:99:6963,503,0
CP000253.1 2762970 . T C 6788.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.4729;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.26;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6817,500,0
CP000253.1 2763176 . A G 6743.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.560;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.0981;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;MQRankSum=-0.046;QD=27.75;ReadPosRankSum=-1.930;SOR=0.129 GT:AD:DP:GQ:PL 1/1:2,241:245:99:6772,491,0
CP000253.1 2763214 . G A 6331.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.812;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.9295;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.84;ReadPosRankSum=0.035;SOR=0.251 GT:AD:DP:GQ:PL 1/1:1,244:245:99:6360,466,0
CP000253.1 2763282 . T C 6488.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.3901;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,249:250:99:6517,470,0
CP000253.1 2763487 . T C 4735.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7276;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=25.88;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,183:185:99:4764,340,0
CP000253.1 2763557 . T A 5271.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.4029;MLEAC=2;MLEAF=1.00;MQ=59.89;MQ0=0;QD=27.03;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,195:195:99:5300,379,0
CP000253.1 2763655 . G A 5782.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.967;DP=223;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0347;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=14.967;QD=25.93;ReadPosRankSum=0.862;SOR=0.281 GT:AD:DP:GQ:PL 1/1:1,222:223:99:5811,415,0
CP000253.1 2764175 . C T 7126.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.7736;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.74;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:249:99:7155,518,0
CP000253.1 2764183 . T C 6790.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.273;DP=248;Dels=0.00;ExcessHet=3.0103;FS=3.138;HaplotypeScore=19.3213;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.38;ReadPosRankSum=-0.105;SOR=0.367 GT:AD:DP:GQ:PL 1/1:1,247:248:99:6819,469,0
CP000253.1 2764189 . A C 6805.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5892;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.78;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,245:246:99:6834,500,0
CP000253.1 2764217 . G A 6840.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.0983;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=28.15;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,243:246:99:6869,497,0
CP000253.1 2764223 . T C 6525.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3581;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=26.64;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,245:247:99:6554,478,0
CP000253.1 2764225 . C T 6723.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4482;MLEAC=2;MLEAF=1.00;MQ=59.95;MQ0=0;QD=27.67;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,243:246:99:6752,494,0
CP000253.1 2764438 . C G 6483.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.782;DP=243;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.9963;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.36;ReadPosRankSum=-1.469;SOR=0.473 GT:AD:DP:GQ:PL 1/1:1,236:243:99:6512,470,0
CP000253.1 2764957 . T C 5922.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.6219;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.32;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,225:228:99:5951,424,0
CP000253.1 2764962 . T C 5888.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.8903;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.17;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,225:228:99:5917,421,0
CP000253.1 2765533 . C T 3925.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,157:158:99:3954,280,0
CP000253.1 2766878 . A G 13.72 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=13.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:40,3,0
CP000253.1 2766882 . T G 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 2767246 . G A 373.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:30:402,30,0
CP000253.1 2767255 . G C 399.77 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:30:428,30,0
CP000253.1 2767256 . G A 362.78 . AC=2;AF=1.00;AN=2;DP=16;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.67;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:27:391,27,0
CP000253.1 2767293 . A C 736.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:54:765,54,0
CP000253.1 2767529 . A G 5211.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.829;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4448;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.06;ReadPosRankSum=-1.629;SOR=0.483 GT:AD:DP:GQ:PL 1/1:1,199:202:99:5240,373,0
CP000253.1 2767535 . A T 5290.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1143;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.72;SOR=1.267 GT:AD:DP:GQ:PL 1/1:0,198:198:99:5319,376,0
CP000253.1 2767538 . T C 5176.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.3874;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.15;SOR=1.267 GT:AD:DP:GQ:PL 1/1:0,198:198:99:5205,370,0
CP000253.1 2767577 . A T 5749.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.9143;MLEAC=2;MLEAF=1.00;MQ=59.87;MQ0=0;QD=25.55;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,225:225:99:5778,406,0
CP000253.1 2767592 . T G 5455.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.708;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0818;MLEAC=2;MLEAF=1.00;MQ=59.86;MQ0=0;MQRankSum=-0.048;QD=25.38;ReadPosRankSum=1.993;SOR=1.050 GT:AD:DP:GQ:PL 1/1:2,213:215:99:5484,388,0
CP000253.1 2767595 . A T 5619.77 . AC=2;AF=1.00;AN=2;DP=215;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2496;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=26.14;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,215:215:99:5648,400,0
CP000253.1 2767601 . T A 5614.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.870;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0394;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;MQRankSum=10.488;QD=25.76;ReadPosRankSum=0.501;SOR=0.735 GT:AD:DP:GQ:PL 1/1:1,217:219:99:5643,403,0
CP000253.1 2767607 . A T 5709.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.5168;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=26.19;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,218:219:99:5738,406,0
CP000253.1 2767620 . T G 4944.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.586;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.052;QD=26.73;ReadPosRankSum=-1.222;SOR=0.168 GT:AD:DP:GQ:PL 1/1:2,183:185:99:4973,358,0
CP000253.1 2767621 . T C 4867.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3650;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=26.89;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4896,352,0
CP000253.1 2767625 . C T 4975.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0293;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=27.49;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,181:181:99:5004,355,0
CP000253.1 2767628 . T C 4933.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0293;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=27.26;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4962,355,0
CP000253.1 2767631 . T C 4917.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.840;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3191;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.053;QD=27.17;ReadPosRankSum=0.000;SOR=1.009 GT:AD:DP:GQ:PL 1/1:2,179:181:99:4946,358,0
CP000253.1 2767641 . A T 4947.77 . AC=2;AF=1.00;AN=2;DP=183;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8960;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;QD=27.04;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,183:183:99:4976,355,0
CP000253.1 2767643 . A T 4945.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.082;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.3798;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.111;QD=26.59;ReadPosRankSum=3.413;SOR=1.018 GT:AD:DP:GQ:PL 1/1:4,182:186:99:4974,285,0
CP000253.1 2767645 . T C 4980.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.267;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.5477;MLEAC=2;MLEAF=1.00;MQ=59.98;MQ0=0;MQRankSum=-0.085;QD=26.78;ReadPosRankSum=2.974;SOR=0.569 GT:AD:DP:GQ:PL 1/1:3,183:186:99:5009,288,0
CP000253.1 2767661 . T A 5713.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1691;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.28;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,226:227:99:5742,409,0
CP000253.1 2767667 . C T 5635.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1306;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.62;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,220:220:99:5664,400,0
CP000253.1 2767669 . A G 5566.77 . AC=2;AF=1.00;AN=2;DP=220;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.2365;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.30;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,220:220:99:5595,397,0
CP000253.1 2767673 . T C 5610.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4044;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.62;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,219:219:99:5639,400,0
CP000253.1 2767679 . T C 5757.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9705;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.25;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,228:228:99:5786,409,0
CP000253.1 2767691 . T A 5788.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0639;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.39;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,228:229:99:5817,412,0
CP000253.1 2767712 . T G 5264.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.959;DP=216;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9999;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;MQRankSum=-0.079;QD=24.49;ReadPosRankSum=-0.417;SOR=0.381 GT:AD:DP:GQ:PL 1/1:3,212:216:99:5293,382,0
CP000253.1 2767718 . A G 5801.77 . AC=2;AF=1.00;AN=2;DP=229;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1760;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.45;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,228:229:99:5830,415,0
CP000253.1 2767724 . C T 5807.77 . AC=2;AF=1.00;AN=2;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1850;MLEAC=2;MLEAF=1.00;MQ=59.99;MQ0=0;QD=25.70;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,226:226:99:5836,412,0
CP000253.1 2767733 . A C 5489.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.0175;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.18;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,218:218:99:5518,397,0
CP000253.1 2767745 . A T 5732.77 . AC=2;AF=1.00;AN=2;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.0269;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.82;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,222:224:99:5761,409,0
CP000253.1 2767754 . C T 5782.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.905;DP=226;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.59;ReadPosRankSum=1.688;SOR=0.319 GT:AD:DP:GQ:PL 1/1:1,225:226:99:5811,409,0
CP000253.1 2767769 . T C 5614.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.897;DP=224;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.18;ReadPosRankSum=-0.638;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,222:224:99:5643,400,0
CP000253.1 2767772 . G A 5404.77 . AC=2;AF=1.00;AN=2;DP=219;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3943;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,219:219:99:5433,385,0
CP000253.1 2767787 . G A 5551.77 . AC=2;AF=1.00;AN=2;DP=221;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0175;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,221:221:99:5580,394,0
CP000253.1 2767889 . G A 3895.77 . AC=2;AF=1.00;AN=2;DP=147;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.0730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.50;SOR=1.324 GT:AD:DP:GQ:PL 1/1:0,147:147:99:3924,277,0
CP000253.1 2767895 . C A 3813.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.775;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.9944;MLEAC=2;MLEAF=1.00;MQ=59.92;MQ0=0;MQRankSum=12.083;QD=26.30;ReadPosRankSum=1.733;SOR=0.521 GT:AD:DP:GQ:PL 1/1:1,144:145:99:3842,274,0
CP000253.1 2767907 . T A 3450.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.743;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7013;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=0.000;QD=25.75;ReadPosRankSum=0.647;SOR=1.086 GT:AD:DP:GQ:PL 1/1:1,133:134:99:3479,247,0
CP000253.1 2768674 . G A 2903.77 . AC=2;AF=1.00;AN=2;DP=126;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6247;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,126:126:99:2932,202,0
CP000253.1 2768738 . A T 2675.77 . AC=2;AF=1.00;AN=2;DP=117;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4683;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,117:117:99:2704,187,0
CP000253.1 2768769 . C T 1812.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.628;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6534;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.38;ReadPosRankSum=1.698;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,80:81:99:1841,107,0
CP000253.1 2768854 . T G 1629.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,69:69:99:1658,114,0
CP000253.1 2768905 . G A 1348.77 . AC=2;AF=1.00;AN=2;DP=55;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:96:1377,96,0
CP000253.1 2769094 . A T 1051.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.011;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.65;ReadPosRankSum=2.394;SOR=1.236 GT:AD:DP:GQ:PL 1/1:2,39:41:40:1080,40,0
CP000253.1 2769095 . T C 1042.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.198;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.43;ReadPosRankSum=2.394;SOR=1.236 GT:AD:DP:GQ:PL 1/1:2,39:41:40:1071,40,0
CP000253.1 2769100 . T G 1139.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4114;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.14;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:42:84:1168,84,0
CP000253.1 2769138 . G A 1808.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3380;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1837,126,0
CP000253.1 2769418 . A G 1935.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5492;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.47;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1964,138,0
CP000253.1 2769528 . T C 1869.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.33;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1898,135,0
CP000253.1 2769540 . T C 2326.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.9015;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.06;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2355,169,0
CP000253.1 2769790 . A G 4442.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.616;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5424;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.55;ReadPosRankSum=0.356;SOR=0.811 GT:AD:DP:GQ:PL 1/1:2,195:200:99:4471,271,0
CP000253.1 2769839 . T C 4442.77 . AC=2;AF=1.00;AN=2;DP=190;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,189:190:99:4471,313,0
CP000253.1 2769955 . T C 3441.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.890;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1959;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.57;ReadPosRankSum=-0.878;SOR=0.277 GT:AD:DP:GQ:PL 1/1:1,145:146:99:3470,241,0
CP000253.1 2769958 . T G 3409.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.889;DP=144;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.9572;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.84;ReadPosRankSum=1.030;SOR=0.452 GT:AD:DP:GQ:PL 1/1:1,142:144:99:3438,241,0
CP000253.1 2770005 . T C 2696.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2580;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2725,190,0
CP000253.1 2770018 . A G 2610.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.2545;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2639,187,0
CP000253.1 2770090 . A T 1608.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1637,117,0
CP000253.1 2770192 . A T 647.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.91;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:25:48:676,48,0
CP000253.1 2770364 . G A 1906.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.76;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1935,135,0
CP000253.1 2770473 . G C 1669.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4613;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1698,117,0
CP000253.1 2770698 . A G 1749.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7544;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1778,126,0
CP000253.1 2770702 . T C 1454.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9311;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1483,102,0
CP000253.1 2770724 . G A 1541.77 . AC=2;AF=1.00;AN=2;DP=65;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.72;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1570,108,0
CP000253.1 2771002 . G A 2609.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4498;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2638,181,0
CP000253.1 2771759 . G A 1108.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:81:1137,81,0
CP000253.1 2771793 . C T 1166.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.93;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:84:1195,84,0
CP000253.1 2771847 . A G 1147.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.51;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:84:1176,84,0
CP000253.1 2772360 . C T 1369.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.713;DP=60;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9283;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.83;ReadPosRankSum=0.405;SOR=0.298 GT:AD:DP:GQ:PL 1/1:1,59:60:80:1398,80,0
CP000253.1 2772461 . T G 2182.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6908;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.22;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2211,153,0
CP000253.1 2773077 . A C 577.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.07;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:42:606,42,0
CP000253.1 2773173 . G A 700.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.174;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.03;ReadPosRankSum=0.995;SOR=0.568 GT:AD:DP:GQ:PL 1/1:1,27:28:51:729,51,0
CP000253.1 2773179 . A T 764.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:57:793,57,0
CP000253.1 2773198 . T C 789.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.68;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:57:818,57,0
CP000253.1 2773236 . G T 916.77 . AC=2;AF=1.00;AN=2;DP=40;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6208;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:66:945,66,0
CP000253.1 2773257 . T C 1655.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5428;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1684,117,0
CP000253.1 2773290 . T C 1646.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3470;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.56;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:1675,114,0
CP000253.1 2773326 . T C 1830.77 . AC=2;AF=1.00;AN=2;DP=81;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,81:81:99:1859,126,0
CP000253.1 2773353 . A T 1690.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1719,117,0
CP000253.1 2773451 . A G 1938.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5310;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.54;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,86:88:99:1967,135,0
CP000253.1 2773491 . A G 1289.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1268;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.03;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1318,93,0
CP000253.1 2773505 . C T 1154.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4596;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:81:1183,81,0
CP000253.1 2773743 . T C 132.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:160,12,0
CP000253.1 2773760 . A G 137.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:165,12,0
CP000253.1 2773787 . C T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2773812 . T C 94.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:122,9,0
CP000253.1 2773959 . G C 576.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:42:605,42,0
CP000253.1 2774257 . C A 11.83 . AC=2;AF=1.00;AN=2;DP=1;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=11.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:3:38,3,0
CP000253.1 2774849 . A G 374.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:27:403,27,0
CP000253.1 2776073 . G A 917.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1719;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.81;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:33:69:946,69,0
CP000253.1 2776459 . T G 1019.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7340;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:75:1048,75,0
CP000253.1 2776695 . T A 230.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:259,18,0
CP000253.1 2777647 . T A 363.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.21;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:27:392,27,0
CP000253.1 2777659 . G A 482.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.99;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:36:511,36,0
CP000253.1 2778091 . T C 186.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:215,15,0
CP000253.1 2778124 . C T 178.90 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:15:207,15,0
CP000253.1 2778493 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2778511 . C T 147.03 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:12:175,12,0
CP000253.1 2778668 . T A 276.80 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.762;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.29;ReadPosRankSum=0.135;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,12:13:21:305,21,0
CP000253.1 2778743 . G C 211.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.508;DP=38;Dels=0.00;ExcessHet=3.0103;FS=3.164;HaplotypeScore=1.9996;MLEAC=1;MLEAF=0.500;MQ=51.15;MQ0=2;MQRankSum=1.301;QD=5.57;ReadPosRankSum=-0.806;SOR=0.840 GT:AD:DP:GQ:PL 0/1:24,14:38:99:240,0,483
CP000253.1 2778763 . C T 108.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.738;DP=38;Dels=0.00;ExcessHet=3.0103;FS=1.604;HaplotypeScore=18.1487;MLEAC=1;MLEAF=0.500;MQ=51.15;MQ0=2;MQRankSum=-2.339;QD=2.86;ReadPosRankSum=-4.673;SOR=1.558 GT:AD:DP:GQ:PL 0/1:28,10:38:99:137,0,548
CP000253.1 2778764 . C G 109.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.276;DP=38;Dels=0.00;ExcessHet=3.0103;FS=1.664;HaplotypeScore=18.1487;MLEAC=1;MLEAF=0.500;MQ=51.15;MQ0=2;MQRankSum=-2.339;QD=2.89;ReadPosRankSum=-4.673;SOR=1.558 GT:AD:DP:GQ:PL 0/1:28,10:38:99:138,0,518
CP000253.1 2778767 . C T 210.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.491;DP=38;Dels=0.00;ExcessHet=3.0103;FS=1.451;HaplotypeScore=25.9210;MLEAC=1;MLEAF=0.500;MQ=51.15;MQ0=2;MQRankSum=1.301;QD=5.55;ReadPosRankSum=-0.433;SOR=0.840 GT:AD:DP:GQ:PL 0/1:24,14:38:99:239,0,442
CP000253.1 2778775 . G C 96.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.204;DP=38;Dels=0.00;ExcessHet=3.0103;FS=1.624;HaplotypeScore=8.6391;MLEAC=1;MLEAF=0.500;MQ=51.15;MQ0=2;MQRankSum=-2.339;QD=2.55;ReadPosRankSum=-4.136;SOR=1.558 GT:AD:DP:GQ:PL 0/1:28,10:38:99:125,0,614
CP000253.1 2778789 . C G 467.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=50.47;MQ0=0;QD=21.26;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:36:496,36,0
CP000253.1 2778801 . C T 86.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.612;DP=20;Dels=0.00;ExcessHet=3.0103;FS=2.077;HaplotypeScore=0.8941;MLEAC=1;MLEAF=0.500;MQ=51.89;MQ0=0;MQRankSum=-1.666;QD=4.34;ReadPosRankSum=-4.172;SOR=1.793 GT:AD:DP:GQ:PL 0/1:12,8:20:99:115,0,293
CP000253.1 2778807 . T A 271.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.194;DP=24;Dels=0.00;ExcessHet=3.0103;FS=2.077;HaplotypeScore=1.5592;MLEAC=1;MLEAF=0.500;MQ=47.39;MQ0=0;MQRankSum=2.742;QD=11.32;ReadPosRankSum=4.505;SOR=0.735 GT:AD:DP:GQ:PL 0/1:12,12:24:79:300,0,79
CP000253.1 2778810 . A G 50.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.108;DP=24;Dels=0.00;ExcessHet=3.0103;FS=2.077;HaplotypeScore=1.5592;MLEAC=1;MLEAF=0.500;MQ=47.39;MQ0=0;MQRankSum=0.000;QD=2.21;ReadPosRankSum=-1.983;SOR=1.535 GT:AD:DP:GQ:PL 0/1:16,7:24:79:79,0,293
CP000253.1 2778857 . C T 84.28 . AC=2;AF=1.00;AN=2;BaseQRankSum=-2.166;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=37.45;MQ0=0;MQRankSum=2.875;QD=7.02;ReadPosRankSum=3.087;SOR=1.863 GT:AD:DP:GQ:PL 1/1:4,8:12:9:112,9,0
CP000253.1 2778866 . T G 114.03 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=39.08;MQ0=0;QD=10.37;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:12:142,12,0
CP000253.1 2778921 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2778932 . T C 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2778939 . T G 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2778940 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2778942 . T A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2779003 . A T 492.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:36:521,36,0
CP000253.1 2779010 . A G 406.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:435,30,0
CP000253.1 2779012 . T A 406.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:435,30,0
CP000253.1 2779013 . A T 406.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:435,30,0
CP000253.1 2779016 . T A 406.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.93;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:435,30,0
CP000253.1 2779059 . G C 2481.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6553;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.89;SOR=1.636 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2510,181,0
CP000253.1 2779219 . T C 5277.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.920;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3972;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.25;ReadPosRankSum=1.428;SOR=0.454 GT:AD:DP:GQ:PL 1/1:1,226:227:99:5306,364,0
CP000253.1 2779225 . T A 5500.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.3895;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,235:236:99:5529,379,0
CP000253.1 2779306 . A T 5567.77 . AC=2;AF=1.00;AN=2;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.0474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.79;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,234:235:99:5596,385,0
CP000253.1 2779732 . A G 4228.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8710;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.27;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,161:163:99:4257,304,0
CP000253.1 2779740 . G T 4354.77 . AC=2;AF=1.00;AN=2;DP=167;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8355;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.08;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4383,313,0
CP000253.1 2780179 . C T 2609.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.4240;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.19;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2638,190,0
CP000253.1 2780257 . T C 2285.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4349;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2314,166,0
CP000253.1 2780260 . G A 2248.77 . AC=2;AF=1.00;AN=2;DP=90;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4349;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:90:99:2277,163,0
CP000253.1 2780263 . T C 2306.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4402;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2335,166,0
CP000253.1 2780272 . T G 2423.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.1775;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.06;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2452,175,0
CP000253.1 2780323 . C T 2300.77 . AC=2;AF=1.00;AN=2;DP=93;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2329,163,0
CP000253.1 2780427 . A G 2655.77 . AC=2;AF=1.00;AN=2;DP=111;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7134;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,109:111:99:2684,190,0
CP000253.1 2780522 . A G 3182.76 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.30;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,131:132:99:3211,226,0
CP000253.1 2780545 . C T 2745.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.750;DP=116;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.67;ReadPosRankSum=-1.449;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,115:116:99:2774,168,0
CP000253.1 2780549 . A G 2816.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7684;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.71;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,114:115:99:2845,199,0
CP000253.1 2780552 . C A 2773.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.7928;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.12;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,115:115:99:2802,196,0
CP000253.1 2780553 . G A 2734.77 . AC=2;AF=1.00;AN=2;DP=115;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5810;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.64;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,111:115:99:2763,196,0
CP000253.1 2780603 . G A 2618.77 . AC=2;AF=1.00;AN=2;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,108:110:99:2647,187,0
CP000253.1 2780644 . A G 2565.77 . AC=2;AF=1.00;AN=2;DP=99;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8388;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.92;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2594,184,0
CP000253.1 2780746 . T A 602.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.816;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6196;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.12;ReadPosRankSum=1.446;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,23:24:48:631,48,0
CP000253.1 2781104 . T G 468.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.9134;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:36:497,36,0
CP000253.1 2781374 . T G 98.28 . AC=2;AF=1.00;AN=2;DP=4;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.57;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:9:126,9,0
CP000253.1 2781401 . G T 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2781405 . A G 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2781439 . A G 191.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.32;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:220,15,0
CP000253.1 2781445 . G A 229.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:18:258,18,0
CP000253.1 2781523 . A G 363.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:392,27,0
CP000253.1 2781558 . A C 280.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:309,21,0
CP000253.1 2781560 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:21:309,21,0
CP000253.1 2781686 . T C 374.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9997;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:27:403,27,0
CP000253.1 2781726 . T C 455.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4530;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.70;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:33:484,33,0
CP000253.1 2781893 . T A 693.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6739;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.38;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:32:51:722,51,0
CP000253.1 2781976 . T C 722.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.59;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:51:751,51,0
CP000253.1 2782267 . A T 2589.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.184;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.9465;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.54;ReadPosRankSum=1.607;SOR=0.430 GT:AD:DP:GQ:PL 1/1:1,109:110:99:2618,181,0
CP000253.1 2782570 . G A 4443.77 . AC=2;AF=1.00;AN=2;DP=163;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.9323;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.26;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,163:163:99:4472,319,0
CP000253.1 2782604 . C A 5017.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.976;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3201;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.21;ReadPosRankSum=1.106;SOR=0.769 GT:AD:DP:GQ:PL 1/1:1,198:199:99:5046,358,0
CP000253.1 2782642 . C A 5615.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.116;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.5343;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.90;ReadPosRankSum=2.330;SOR=0.697 GT:AD:DP:GQ:PL 1/1:3,232:235:99:5644,400,0
CP000253.1 2782708 . G A 5857.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=30.8371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.11;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,243:245:99:5886,415,0
CP000253.1 2782843 . A T 6319.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=35.0863;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,244:247:99:6348,457,0
CP000253.1 2782864 . A G 6104.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.382;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.6590;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.02;ReadPosRankSum=-1.591;SOR=0.244 GT:AD:DP:GQ:PL 1/1:4,240:247:99:6133,448,0
CP000253.1 2782911 . C T 6043.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.1713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,241:244:99:6072,433,0
CP000253.1 2782917 . A G 6142.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=38.7782;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.81;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,238:240:99:6171,445,0
CP000253.1 2782978 . A G 4723.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.253;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4475;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.26;ReadPosRankSum=-1.321;SOR=0.154 GT:AD:DP:GQ:PL 1/1:2,185:188:99:4752,326,0
CP000253.1 2782981 . C T 4993.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2224;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.56;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,188:188:99:5022,361,0
CP000253.1 2782984 . A T 5077.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3009;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.01;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,188:188:99:5106,367,0
CP000253.1 2782987 . A T 4855.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4448;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,187:188:99:4884,352,0
CP000253.1 2782993 . T A 4973.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.46;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,188:188:99:5002,358,0
CP000253.1 2782996 . G A 4897.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.2512;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.05;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,188:188:99:4926,358,0
CP000253.1 2782999 . T C 4909.77 . AC=2;AF=1.00;AN=2;DP=192;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4037;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,191:192:99:4938,355,0
CP000253.1 2783011 . G T 5408.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.8571;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.00;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,208:208:99:5437,391,0
CP000253.1 2783126 . G T 5057.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8847;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.62;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,190:191:99:5086,364,0
CP000253.1 2783127 . T G 5090.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.779;DP=196;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8900;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.97;ReadPosRankSum=-0.858;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,195:196:99:5119,367,0
CP000253.1 2783182 . G A 6318.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.3784;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.48;ReadPosRankSum=-0.182;SOR=0.367 GT:AD:DP:GQ:PL 1/1:1,247:248:99:6347,448,0
CP000253.1 2783283 . G A 6263.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5840;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.67;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,244:247:99:6292,445,0
CP000253.1 2783449 . C T 5836.77 . AC=2;AF=1.00;AN=2;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.5355;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.06;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,208:209:99:5865,424,0
CP000253.1 2783473 . A T 5650.77 . AC=2;AF=1.00;AN=2;DP=213;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6021;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.65;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,212:213:99:5679,409,0
CP000253.1 2783561 . T C 5346.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.7232;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,207:208:99:5375,388,0
CP000253.1 2783772 . G T 4687.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.758;DP=178;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=25.1950;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.48;ReadPosRankSum=-0.480;SOR=0.252 GT:AD:DP:GQ:PL 1/1:1,176:178:99:4716,343,0
CP000253.1 2783794 . C T 4663.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.798;DP=175;Dels=0.00;ExcessHet=3.0103;FS=3.277;HaplotypeScore=19.9195;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.80;ReadPosRankSum=2.904;SOR=0.258 GT:AD:DP:GQ:PL 1/1:3,171:175:99:4692,336,0
CP000253.1 2783865 . G A 5349.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.408;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.1514;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.22;ReadPosRankSum=-0.548;SOR=0.733 GT:AD:DP:GQ:PL 1/1:2,202:209:99:5378,350,0
CP000253.1 2783874 . A T 5234.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.181;DP=209;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.0198;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.17;ReadPosRankSum=1.569;SOR=0.795 GT:AD:DP:GQ:PL 1/1:4,204:209:99:5263,341,0
CP000253.1 2783877 . T C 5338.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.422;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.7799;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.42;ReadPosRankSum=2.734;SOR=0.795 GT:AD:DP:GQ:PL 1/1:6,204:211:99:5367,307,0
CP000253.1 2783879 . A G 5249.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.619;DP=211;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.88;ReadPosRankSum=2.728;SOR=0.784 GT:AD:DP:GQ:PL 1/1:6,205:211:99:5278,272,0
CP000253.1 2783886 . G A 5485.77 . AC=2;AF=1.00;AN=2;DP=218;Dels=0.03;ExcessHet=3.0103;FS=0.000;HaplotypeScore=45.3365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.37;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,208:212:99:5514,391,0
CP000253.1 2783937 . A G 5582.77 . AC=2;AF=1.00;AN=2;DP=228;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=40.6622;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,225:227:99:5611,394,0
CP000253.1 2784080 . G A 5503.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.785;DP=217;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.4022;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.48;ReadPosRankSum=1.620;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,215:217:99:5532,394,0
CP000253.1 2784168 . G A 4739.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4440;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4768,337,0
CP000253.1 2784171 . T C 4761.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4349;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4790,340,0
CP000253.1 2784400 . T G 4618.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.390;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.0780;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.10;ReadPosRankSum=-0.421;SOR=0.114 GT:AD:DP:GQ:PL 1/1:2,182:185:99:4647,314,0
CP000253.1 2784424 . A G 4995.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=34.1030;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.36;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,197:198:99:5024,358,0
CP000253.1 2784439 . A G 4948.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.089;DP=192;Dels=0.00;ExcessHet=3.0103;FS=3.178;HaplotypeScore=24.9366;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=9.773;QD=25.91;ReadPosRankSum=1.885;SOR=0.315 GT:AD:DP:GQ:PL 1/1:2,189:192:99:4977,329,0
CP000253.1 2784463 . G A 4854.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.767;DP=193;Dels=0.00;ExcessHet=3.0103;FS=3.291;HaplotypeScore=26.0030;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;MQRankSum=13.893;QD=25.29;ReadPosRankSum=0.875;SOR=0.445 GT:AD:DP:GQ:PL 1/1:1,191:193:99:4883,319,0
CP000253.1 2784487 . G A 4796.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.9751;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.07;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,184:185:99:4825,346,0
CP000253.1 2784496 . T C 4736.77 . AC=2;AF=1.00;AN=2;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=28.6919;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.74;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,184:186:99:4765,346,0
CP000253.1 2785218 . G A 6663.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,247:248:99:6692,476,0
CP000253.1 2785290 . G T 6418.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.666;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8167;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.99;ReadPosRankSum=-1.556;SOR=0.107 GT:AD:DP:GQ:PL 1/1:2,245:248:99:6447,455,0
CP000253.1 2785344 . A G 6184.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.5871;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.56;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,242:246:99:6213,442,0
CP000253.1 2785350 . A T 6324.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.8647;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.71;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,246:247:99:6353,445,0
CP000253.1 2785371 . C T 6482.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.9905;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.04;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,249:249:99:6511,461,0
CP000253.1 2785414 . A G 6273.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.785;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.3107;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.30;ReadPosRankSum=1.411;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,247:248:99:6302,448,0
CP000253.1 2785453 . T C 5996.77 . AC=2;AF=1.00;AN=2;DP=240;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.99;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6025,430,0
CP000253.1 2785552 . T G 5091.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.562;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.1023;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.21;ReadPosRankSum=1.702;SOR=0.469 GT:AD:DP:GQ:PL 1/1:2,200:203:99:5120,364,0
CP000253.1 2785564 . G A 5060.77 . AC=2;AF=1.00;AN=2;DP=203;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.3150;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,202:203:99:5089,358,0
CP000253.1 2785585 . A G 4671.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.8940;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.81;ReadPosRankSum=1.579;SOR=0.396 GT:AD:DP:GQ:PL 1/1:1,180:184:99:4700,331,0
CP000253.1 2785600 . C T 4577.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.01;SOR=1.185 GT:AD:DP:GQ:PL 1/1:0,176:176:99:4606,325,0
CP000253.1 2785679 . T A 2820.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6027;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.86;SOR=1.279 GT:AD:DP:GQ:PL 1/1:0,105:106:99:2849,202,0
CP000253.1 2785680 . G C 2802.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7086;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.44;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2831,202,0
CP000253.1 2786880 . T C 6614.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.849;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1426;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.46;ReadPosRankSum=0.118;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6643,476,0
CP000253.1 2786885 . G A 6820.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.879;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2744;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=27.28;ReadPosRankSum=0.665;SOR=0.226 GT:AD:DP:GQ:PL 1/1:1,249:250:99:6849,494,0
CP000253.1 2786920 . T C 6393.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.821;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0188;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.75;ReadPosRankSum=-0.319;SOR=0.250 GT:AD:DP:GQ:PL 1/1:1,238:241:99:6422,463,0
CP000253.1 2786926 . A T 6686.77 . AC=2;AF=1.00;AN=2;DP=245;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.6122;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=27.40;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,244:245:99:6715,485,0
CP000253.1 2786956 . T G 6180.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.441;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5794;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=-0.046;QD=25.97;ReadPosRankSum=-0.005;SOR=0.197 GT:AD:DP:GQ:PL 1/1:2,236:238:99:6209,448,0
CP000253.1 2786959 . T G 6110.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.870;DP=238;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.8181;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=-0.117;QD=25.78;ReadPosRankSum=2.664;SOR=0.513 GT:AD:DP:GQ:PL 1/1:5,232:238:99:6139,399,0
CP000253.1 2786962 . A G 6378.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.789;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.3322;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=26.58;ReadPosRankSum=0.664;SOR=0.233 GT:AD:DP:GQ:PL 1/1:1,239:241:99:6407,463,0
CP000253.1 2786971 . A C 6437.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.843;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.6674;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=25.85;ReadPosRankSum=1.085;SOR=0.380 GT:AD:DP:GQ:PL 1/1:1,248:249:99:6466,463,0
CP000253.1 2786992 . A T 5917.77 . AC=2;AF=1.00;AN=2;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.4479;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.84;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,229:233:99:5946,424,0
CP000253.1 2786995 . T A 5895.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=233;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=26.9532;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;MQRankSum=0.000;QD=25.52;ReadPosRankSum=-0.015;SOR=0.335 GT:AD:DP:GQ:PL 1/1:1,230:233:99:5924,421,0
CP000253.1 2787001 . G A 6002.77 . AC=2;AF=1.00;AN=2;DP=236;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5123;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.44;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,236:236:99:6031,430,0
CP000253.1 2787013 . T C 6325.77 . AC=2;AF=1.00;AN=2;DP=248;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1541;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=25.61;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,247:248:99:6354,454,0
CP000253.1 2787031 . C T 6059.77 . AC=2;AF=1.00;AN=2;DP=244;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.7351;MLEAC=2;MLEAF=1.00;MQ=59.73;MQ0=0;QD=25.14;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,241:243:99:6088,430,0
CP000253.1 2787052 . A G 6019.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.3953;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=24.88;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,242:242:99:6048,430,0
CP000253.1 2787055 . G A 6090.77 . AC=2;AF=1.00;AN=2;DP=242;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.7023;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;QD=25.38;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,240:242:99:6119,433,0
CP000253.1 2787097 . G T 5945.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.808;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2244;MLEAC=2;MLEAF=1.00;MQ=59.85;MQ0=0;MQRankSum=0.000;QD=25.52;ReadPosRankSum=-0.803;SOR=0.746 GT:AD:DP:GQ:PL 1/1:1,232:235:99:5974,424,0
CP000253.1 2787106 . T C 5940.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2602;MLEAC=2;MLEAF=1.00;MQ=59.84;MQ0=0;QD=26.29;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,226:227:99:5969,424,0
CP000253.1 2787109 . C T 5747.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.868;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.0651;MLEAC=2;MLEAF=1.00;MQ=59.81;MQ0=0;MQRankSum=10.440;QD=26.13;ReadPosRankSum=1.709;SOR=0.376 GT:AD:DP:GQ:PL 1/1:1,219:222:99:5776,412,0
CP000253.1 2787142 . T C 5514.77 . AC=2;AF=1.00;AN=2;DP=205;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.2937;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=27.03;SOR=1.134 GT:AD:DP:GQ:PL 1/1:0,204:205:99:5543,394,0
CP000253.1 2787150 . C T 5534.77 . AC=2;AF=1.00;AN=2;DP=206;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6653;MLEAC=2;MLEAF=1.00;MQ=59.94;MQ0=0;QD=27.00;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,205:206:99:5563,400,0
CP000253.1 2787166 . G A 5274.77 . AC=2;AF=1.00;AN=2;DP=199;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.5551;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.64;SOR=0.988 GT:AD:DP:GQ:PL 1/1:0,198:199:99:5303,379,0
CP000253.1 2787172 . T A 5185.77 . AC=2;AF=1.00;AN=2;DP=195;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.2232;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.59;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,195:195:99:5214,373,0
CP000253.1 2787181 . T C 4955.77 . AC=2;AF=1.00;AN=2;DP=189;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6224;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.22;SOR=0.938 GT:AD:DP:GQ:PL 1/1:0,189:189:99:4984,358,0
CP000253.1 2787187 . A G 4388.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.846;DP=162;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.8961;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;MQRankSum=0.000;QD=27.43;ReadPosRankSum=0.747;SOR=0.368 GT:AD:DP:GQ:PL 1/1:1,159:162:99:4417,319,0
CP000253.1 2787190 . C T 4220.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6843;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=27.23;SOR=0.998 GT:AD:DP:GQ:PL 1/1:0,155:155:99:4249,304,0
CP000253.1 2787193 . A T 4159.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.8988;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=26.84;SOR=0.998 GT:AD:DP:GQ:PL 1/1:0,155:155:99:4188,301,0
CP000253.1 2787196 . A G 4367.77 . AC=2;AF=1.00;AN=2;DP=158;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6721;MLEAC=2;MLEAF=1.00;MQ=59.96;MQ0=0;QD=27.64;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4396,316,0
CP000253.1 2787220 . G A 4402.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.3395;MLEAC=2;MLEAF=1.00;MQ=59.97;MQ0=0;QD=26.21;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4431,316,0
CP000253.1 2787232 . C T 4123.77 . AC=2;AF=1.00;AN=2;DP=164;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7210;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.14;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4152,295,0
CP000253.1 2787238 . T C 3961.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.893;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.7752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.56;ReadPosRankSum=1.219;SOR=0.335 GT:AD:DP:GQ:PL 1/1:1,154:155:99:3990,283,0
CP000253.1 2787253 . C A 3936.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.458;DP=155;Dels=0.00;ExcessHet=3.0103;FS=3.699;HaplotypeScore=17.8922;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.40;ReadPosRankSum=0.325;SOR=0.608 GT:AD:DP:GQ:PL 1/1:2,153:155:99:3965,283,0
CP000253.1 2787267 . A G 3532.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.6636;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.60;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3561,253,0
CP000253.1 2787268 . T A 3506.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.3682;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.41;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3535,250,0
CP000253.1 2787277 . A T 3614.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.5495;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.64;SOR=0.926 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3643,256,0
CP000253.1 2787292 . A G 3387.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1474;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.73;ReadPosRankSum=-1.530;SOR=0.370 GT:AD:DP:GQ:PL 1/1:1,136:141:99:3416,244,0
CP000253.1 2787313 . G C 3191.82 . AC=2;AF=1.00;AN=2;DP=128;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.0778;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3220,232,0
CP000253.1 2787379 . T C 3114.77 . AC=2;AF=1.00;AN=2;DP=127;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4753;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,126:127:99:3143,229,0
CP000253.1 2787839 . A G 1660.77 . AC=2;AF=1.00;AN=2;DP=70;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8867;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.73;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:70:99:1689,120,0
CP000253.1 2787845 . G A 1494.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.65;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1523,105,0
CP000253.1 2787848 . C T 1582.77 . AC=2;AF=1.00;AN=2;DP=66;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4162;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:1611,111,0
CP000253.1 2787860 . G A 1645.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.86;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,72:72:99:1674,117,0
CP000253.1 2788070 . T G 978.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.858;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2444;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.47;ReadPosRankSum=1.129;SOR=0.990 GT:AD:DP:GQ:PL 1/1:1,39:41:72:1007,72,0
CP000253.1 2788381 . A G 6279.77 . AC=2;AF=1.00;AN=2;DP=247;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4493;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;QD=25.74;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,244:247:99:6308,448,0
CP000253.1 2788445 . T G 7047.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.413;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.3373;MLEAC=2;MLEAF=1.00;MQ=59.91;MQ0=0;MQRankSum=9.111;QD=28.19;ReadPosRankSum=2.753;SOR=0.320 GT:AD:DP:GQ:PL 1/1:3,247:250:99:7076,509,0
CP000253.1 2788735 . G T 5589.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.736;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4072;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.18;ReadPosRankSum=1.397;SOR=0.321 GT:AD:DP:GQ:PL 1/1:1,221:222:99:5618,400,0
CP000253.1 2788753 . C T 5407.77 . AC=2;AF=1.00;AN=2;DP=212;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7351;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.75;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,210:212:99:5436,385,0
CP000253.1 2788789 . A C 4096.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.841;DP=171;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.6506;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.10;ReadPosRankSum=0.326;SOR=0.474 GT:AD:DP:GQ:PL 1/1:1,169:171:99:4125,298,0
CP000253.1 2789155 . G A 527.77 . AC=2;AF=1.00;AN=2;DP=20;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.39;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:39:556,39,0
CP000253.1 2789173 . G A 254.80 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.48;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:21:283,21,0
CP000253.1 2789242 . G A 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2789250 . A T 57.74 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:6:85,6,0
CP000253.1 2789269 . T A 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 2789270 . A G 53.74 . AC=2;AF=1.00;AN=2;DP=2;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0
CP000253.1 2789305 . T A 102.28 . AC=2;AF=1.00;AN=2;DP=5;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.46;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:9:130,9,0
CP000253.1 2789350 . C G 106.28 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.71;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:9:134,9,0
CP000253.1 2789423 . C A 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2789433 . T A 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2789435 . A T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2789436 . C T 280.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.60;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:309,21,0
CP000253.1 2790008 . G A 3405.77 . AC=2;AF=1.00;AN=2;DP=140;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9613;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.33;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,140:140:99:3434,241,0
CP000253.1 2790475 . A G 777.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.22;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:57:806,57,0
CP000253.1 2790588 . C T 93.28 . AC=2;AF=1.00;AN=2;DP=3;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0
CP000253.1 2790691 . T C 528.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:39:557,39,0
CP000253.1 2790692 . A T 533.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7675;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.24;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:25:39:562,39,0
CP000253.1 2790694 . C T 545.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:39:574,39,0
CP000253.1 2790874 . A G 784.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:33:57:813,57,0
CP000253.1 2790944 . T C 736.77 . AC=2;AF=1.00;AN=2;DP=31;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:54:765,54,0
CP000253.1 2790987 . C T 641.77 . AC=2;AF=1.00;AN=2;DP=27;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:48:670,48,0
CP000253.1 2791443 . T C 1152.77 . AC=2;AF=1.00;AN=2;DP=52;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6008;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.17;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,52:52:81:1181,81,0
CP000253.1 2791773 . C T 321.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.98;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:350,24,0
CP000253.1 2791859 . C A 349.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:27:378,27,0
CP000253.1 2792159 . A T 1627.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8888;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.94;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1656,114,0
CP000253.1 2792161 . C T 1615.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7829;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1644,114,0
CP000253.1 2792192 . A T 1871.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5764;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.31;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,77:77:99:1900,135,0
CP000253.1 2792270 . C T 2030.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.917;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.18;ReadPosRankSum=-1.238;SOR=0.338 GT:AD:DP:GQ:PL 1/1:1,83:85:99:2059,144,0
CP000253.1 2792285 . T C 2061.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6193;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2090,147,0
CP000253.1 2792739 . T C 917.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:66:946,66,0
CP000253.1 2793215 . T C 2810.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.956;DP=130;Dels=0.00;ExcessHet=3.0103;FS=3.078;HaplotypeScore=12.2143;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.62;ReadPosRankSum=-1.413;SOR=0.297 GT:AD:DP:GQ:PL 1/1:1,129:130:99:2839,164,0
CP000253.1 2793533 . A G 1031.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:46:75:1060,75,0
CP000253.1 2793605 . C T 1098.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.42;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:78:1127,78,0
CP000253.1 2793622 . A G 1070.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.78;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:75:1099,75,0
CP000253.1 2793623 . T C 1075.77 . AC=2;AF=1.00;AN=2;DP=47;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6823;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.89;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:75:1104,75,0
CP000253.1 2793751 . T C 374.78 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:27:403,27,0
CP000253.1 2793781 . A G 195.90 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=19.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:15:224,15,0
CP000253.1 2793783 . C T 144.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=20.58;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:8:12:172,12,0
CP000253.1 2793789 . C T 142.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=17.75;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:170,12,0
CP000253.1 2793810 . A T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2793855 . G A 276.80 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.29;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:21:305,21,0
CP000253.1 2793915 . T C 1747.77 . AC=2;AF=1.00;AN=2;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5655;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1776,123,0
CP000253.1 2794004 . C T 2445.77 . AC=2;AF=1.00;AN=2;DP=106;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2845;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.07;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,106:106:99:2474,172,0
CP000253.1 2794024 . C A 2662.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7416;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,114:114:99:2691,184,0
CP000253.1 2794050 . T G 2668.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.850;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6408;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.06;ReadPosRankSum=-0.859;SOR=0.266 GT:AD:DP:GQ:PL 1/1:1,120:121:99:2697,187,0
CP000253.1 2794059 . G T 2766.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.944;DP=123;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.8946;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.49;ReadPosRankSum=0.662;SOR=0.381 GT:AD:DP:GQ:PL 1/1:1,122:123:99:2795,193,0
CP000253.1 2794083 . C T 2744.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.961;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5116;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.07;ReadPosRankSum=0.277;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,118:120:99:2773,193,0
CP000253.1 2794086 . G A 2773.77 . AC=2;AF=1.00;AN=2;DP=120;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5221;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,120:120:99:2802,193,0
CP000253.1 2794107 . G A 2785.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.1311;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.02;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2814,196,0
CP000253.1 2794125 . A G 2637.77 . AC=2;AF=1.00;AN=2;DP=113;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0617;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,113:113:99:2666,184,0
CP000253.1 2794140 . A G 2300.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.799;DP=101;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.2687;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.78;ReadPosRankSum=0.515;SOR=0.294 GT:AD:DP:GQ:PL 1/1:1,100:101:99:2329,166,0
CP000253.1 2794176 . T C 2202.77 . AC=2;AF=1.00;AN=2;DP=98;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.7169;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.95;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,96:98:99:2231,157,0
CP000253.1 2794212 . T A 1796.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0673;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:71:99:1825,126,0
CP000253.1 2794272 . T C 1560.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6147;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.17;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1589,111,0
CP000253.1 2794299 . T C 1088.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.5661;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:81:1117,81,0
CP000253.1 2794369 . T A 958.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.3898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.58;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:69:987,69,0
CP000253.1 2794706 . A G 2932.77 . AC=2;AF=1.00;AN=2;DP=125;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.7236;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,124:125:99:2961,205,0
CP000253.1 2795113 . A G 1376.77 . AC=2;AF=1.00;AN=2;DP=58;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3714;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.74;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:96:1405,96,0
CP000253.1 2795197 . T A 490.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.654;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.4875;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=20.45;ReadPosRankSum=1.015;SOR=0.353 GT:AD:DP:GQ:PL 1/1:1,23:24:36:519,36,0
CP000253.1 2795251 . T A 392.77 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.10;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:30:421,30,0
CP000253.1 2795266 . T C 435.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:464,33,0
CP000253.1 2795824 . C T 5613.77 . AC=2;AF=1.00;AN=2;DP=239;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4552;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,239:239:99:5642,388,0
CP000253.1 2795839 . T C 5412.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,230:231:99:5441,376,0
CP000253.1 2795842 . A G 5419.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7593;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,225:227:99:5448,376,0
CP000253.1 2795847 . T A 5377.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0253;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.69;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,227:227:99:5406,373,0
CP000253.1 2795848 . G A 5310.77 . AC=2;AF=1.00;AN=2;DP=227;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.1312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.40;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,227:227:99:5339,367,0
CP000253.1 2795860 . A T 5534.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4699;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.97;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,241:241:99:5563,382,0
CP000253.1 2795861 . T A 5697.77 . AC=2;AF=1.00;AN=2;DP=246;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.16;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,246:246:99:5726,391,0
CP000253.1 2795868 . G A 5838.77 . AC=2;AF=1.00;AN=2;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.7313;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.36;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,250:250:99:5867,400,0
CP000253.1 2795899 . C T 5376.77 . AC=2;AF=1.00;AN=2;DP=231;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.38;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,230:231:99:5405,370,0
CP000253.1 2795923 . T C 5326.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0876;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.78;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,224:225:99:5355,370,0
CP000253.1 2795978 . A G 4567.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1626;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,185:185:99:4596,325,0
CP000253.1 2796010 . A C 3303.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.894;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.8144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.12;ReadPosRankSum=1.669;SOR=0.260 GT:AD:DP:GQ:PL 1/1:1,136:137:99:3332,235,0
CP000253.1 2796013 . T C 3368.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.0536;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3397,238,0
CP000253.1 2796233 . T A 4339.77 . AC=2;AF=1.00;AN=2;DP=176;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.5897;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.94;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,174:176:99:4368,310,0
CP000253.1 2796564 . G A 6103.77 . AC=2;AF=1.00;AN=2;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4443;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,241:241:99:6132,439,0
CP000253.1 2796633 . T A 5604.77 . AC=2;AF=1.00;AN=2;DP=225;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2574;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,223:225:99:5633,397,0
CP000253.1 2797401 . C T 320.78 . AC=2;AF=1.00;AN=2;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.91;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:24:349,24,0
CP000253.1 2797507 . T C 751.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=31.32;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:57:780,57,0
CP000253.1 2797550 . C G 1551.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8902;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.71;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1580,114,0
CP000253.1 2797556 . T C 1676.77 . AC=2;AF=1.00;AN=2;DP=62;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.7466;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.04;SOR=1.536 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1705,123,0
CP000253.1 2797916 . T C 4797.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.5148;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,191:193:99:4826,343,0
CP000253.1 2797920 . A G 4840.77 . AC=2;AF=1.00;AN=2;DP=193;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5400;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.08;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,193:193:99:4869,346,0
CP000253.1 2797922 . T C 4848.77 . AC=2;AF=1.00;AN=2;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.2578;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.25;SOR=0.999 GT:AD:DP:GQ:PL 1/1:0,192:194:99:4877,343,0
CP000253.1 2797931 . T C 5037.77 . AC=2;AF=1.00;AN=2;DP=204;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6198;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.69;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,204:204:99:5066,358,0
CP000253.1 2797943 . G A 4673.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.449;DP=187;Dels=0.00;ExcessHet=3.0103;FS=3.720;HaplotypeScore=17.7260;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.13;ReadPosRankSum=2.398;SOR=0.624 GT:AD:DP:GQ:PL 1/1:2,184:187:99:4702,337,0
CP000253.1 2797977 . G A 4544.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;DP=170;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.8105;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.73;ReadPosRankSum=-0.703;SOR=0.847 GT:AD:DP:GQ:PL 1/1:1,169:170:99:4573,328,0
CP000253.1 2798006 . T A 4239.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7784;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,164:165:99:4268,304,0
CP000253.1 2798021 . C T 4071.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0825;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.10;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,156:156:99:4100,292,0
CP000253.1 2798069 . T G 3950.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.52;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,149:149:99:3979,283,0
CP000253.1 2798072 . A G 3911.77 . AC=2;AF=1.00;AN=2;DP=145;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.98;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,145:145:99:3940,283,0
CP000253.1 2798078 . T C 3895.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.3608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.68;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3924,280,0
CP000253.1 2798087 . T A 4035.77 . AC=2;AF=1.00;AN=2;DP=152;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.55;SOR=0.988 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4064,289,0
CP000253.1 2798105 . T C 3605.77 . AC=2;AF=1.00;AN=2;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6123;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.39;SOR=0.907 GT:AD:DP:GQ:PL 1/1:0,142:143:99:3634,262,0
CP000253.1 2798121 . G C 3534.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.866;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.1355;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.25;ReadPosRankSum=0.520;SOR=0.294 GT:AD:DP:GQ:PL 1/1:1,139:143:99:3563,256,0
CP000253.1 2798144 . C T 3564.77 . AC=2;AF=1.00;AN=2;DP=149;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8143;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.42;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,146:149:99:3593,253,0
CP000253.1 2798156 . C T 3495.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,144:146:99:3524,247,0
CP000253.1 2798994 . A G 4091.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,173:174:99:4120,286,0
CP000253.1 2798996 . T A 4117.77 . AC=2;AF=1.00;AN=2;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4870;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,174:174:99:4146,286,0
CP000253.1 2799000 . T A 4060.77 . AC=2;AF=1.00;AN=2;DP=172;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.61;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,172:172:99:4089,283,0
CP000253.1 2799010 . A G 3703.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.59;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,157:157:99:3732,259,0
CP000253.1 2799011 . C T 3681.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.75;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,155:155:99:3710,256,0
CP000253.1 2799012 . A G 3608.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4085;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.90;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,151:155:99:3637,256,0
CP000253.1 2799194 . A G 2989.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.557;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2536;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.48;ReadPosRankSum=0.573;SOR=0.144 GT:AD:DP:GQ:PL 1/1:2,131:134:99:3018,183,0
CP000253.1 2799195 . C T 3097.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.033;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2536;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.65;ReadPosRankSum=0.278;SOR=0.307 GT:AD:DP:GQ:PL 1/1:1,130:132:99:3126,217,0
CP000253.1 2799196 . C A 3072.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.873;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5713;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.28;ReadPosRankSum=-0.997;SOR=0.140 GT:AD:DP:GQ:PL 1/1:2,130:132:99:3101,214,0
CP000253.1 2799201 . C T 2980.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=22.5730;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.11;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,129:131:99:3009,211,0
CP000253.1 2799204 . G A 3114.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.2858;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3143,217,0
CP000253.1 2799226 . G A 2769.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.884;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6411;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.08;ReadPosRankSum=1.589;SOR=0.468 GT:AD:DP:GQ:PL 1/1:1,119:121:99:2798,196,0
CP000253.1 2799540 . G A 370.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.81;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:399,27,0
CP000253.1 2799543 . C A 406.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.60;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:30:435,30,0
CP000253.1 2799548 . G A 446.77 . AC=2;AF=1.00;AN=2;DP=19;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:33:475,33,0
CP000253.1 2799638 . G A 499.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7262;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.73;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:528,36,0
CP000253.1 2799644 . T A 500.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.77;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:529,36,0
CP000253.1 2799667 . T C 548.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6548;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.95;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:39:577,39,0
CP000253.1 2799731 . T G 798.77 . AC=2;AF=1.00;AN=2;DP=35;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:57:827,57,0
CP000253.1 2799756 . A G 741.77 . AC=2;AF=1.00;AN=2;DP=32;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:54:770,54,0
CP000253.1 2799854 . A T 335.78 . AC=2;AF=1.00;AN=2;DP=13;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.83;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:27:364,27,0
CP000253.1 2799862 . C A 330.78 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.56;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:27:359,27,0
CP000253.1 2800098 . C G 2012.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7336;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.96;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,84:85:99:2041,144,0
CP000253.1 2800147 . A G 2700.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.705;DP=122;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.6917;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.89;ReadPosRankSum=1.645;SOR=0.416 GT:AD:DP:GQ:PL 1/1:1,117:122:99:2729,193,0
CP000253.1 2800158 . C T 2894.77 . AC=2;AF=1.00;AN=2;DP=124;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0978;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.53;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:124:99:2923,202,0
CP000253.1 2800573 . A G 655.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.42;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:29:48:684,48,0
CP000253.1 2800702 . A G 1329.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.93;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:59:93:1358,93,0
CP000253.1 2800737 . T G 1548.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.861;DP=71;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4090;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.81;ReadPosRankSum=0.880;SOR=0.313 GT:AD:DP:GQ:PL 1/1:1,70:71:99:1577,108,0
CP000253.1 2800871 . G A 1660.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.44;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:75:99:1689,114,0
CP000253.1 2800893 . T A 1661.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.8878;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.16;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1690,114,0
CP000253.1 2800950 . G A 1377.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5489;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.35;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,59:59:96:1406,96,0
CP000253.1 2800959 . C T 1244.77 . AC=2;AF=1.00;AN=2;DP=54;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.5144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:87:1273,87,0
CP000253.1 2801122 . T C 252.80 . AC=2;AF=1.00;AN=2;DP=12;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6504;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.07;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:21:281,21,0
CP000253.1 2801169 . A C 352.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9665;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:381,27,0
CP000253.1 2801625 . T G 3375.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.733;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1272;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.94;ReadPosRankSum=1.343;SOR=0.127 GT:AD:DP:GQ:PL 1/1:2,139:141:99:3404,206,0
CP000253.1 2801670 . A C 3505.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.723;DP=143;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.6795;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.86;ReadPosRankSum=-1.389;SOR=0.408 GT:AD:DP:GQ:PL 1/1:1,140:143:99:3534,253,0
CP000253.1 2801721 . A G 2991.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.0525;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.24;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3020,217,0
CP000253.1 2801961 . T C 1279.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0984;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.82;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:96:1308,96,0
CP000253.1 2802136 . G A 3017.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.1904;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.21;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3046,211,0
CP000253.1 2802141 . G T 3031.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6153;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,129:130:99:3060,214,0
CP000253.1 2802142 . T C 3032.77 . AC=2;AF=1.00;AN=2;DP=130;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.6371;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.33;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3061,214,0
CP000253.1 2802148 . C T 3579.77 . AC=2;AF=1.00;AN=2;DP=155;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2697;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.55;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,152:155:99:3608,253,0
CP000253.1 2802228 . C T 4700.77 . AC=2;AF=1.00;AN=2;DP=198;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9560;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.98;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,196:198:99:4729,328,0
CP000253.1 2802393 . C A 4057.77 . AC=2;AF=1.00;AN=2;DP=165;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3170;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.59;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,165:165:99:4086,286,0
CP000253.1 2802645 . A G 1818.77 . AC=2;AF=1.00;AN=2;DP=77;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.4358;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.25;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,75:77:99:1847,129,0
CP000253.1 2802648 . A C 1738.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.9306;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.50;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1767,123,0
CP000253.1 2802735 . C T 957.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6740;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:69:986,69,0
CP000253.1 2802916 . C T 529.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.2460;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:558,39,0
CP000253.1 2802926 . T C 530.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:39:559,39,0
CP000253.1 2802954 . C A 500.77 . AC=2;AF=1.00;AN=2;DP=23;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.77;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:36:529,36,0
CP000253.1 2802989 . T G 576.77 . AC=2;AF=1.00;AN=2;DP=26;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.18;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:42:605,42,0
CP000253.1 2803009 . C A 518.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:39:547,39,0
CP000253.1 2803010 . C T 504.77 . AC=2;AF=1.00;AN=2;DP=24;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.03;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:36:533,36,0
CP000253.1 2803023 . T C 484.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.08;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:513,36,0
CP000253.1 2803031 . C T 584.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:613,42,0
CP000253.1 2803042 . G A 585.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.43;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:42:614,42,0
CP000253.1 2803043 . T G 647.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:48:676,48,0
CP000253.1 2803081 . C T 1015.77 . AC=2;AF=1.00;AN=2;DP=41;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.77;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:72:1044,72,0
CP000253.1 2803472 . G T 4705.77 . AC=2;AF=1.00;AN=2;DP=202;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.4925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.30;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,202:202:99:4734,325,0
CP000253.1 2803538 . G A 3134.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.765;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2149;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.12;ReadPosRankSum=0.159;SOR=0.468 GT:AD:DP:GQ:PL 1/1:1,119:121:99:3163,226,0
CP000253.1 2803571 . G A 2807.77 . AC=2;AF=1.00;AN=2;DP=103;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.9926;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.26;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,103:103:99:2836,202,0
CP000253.1 2803892 . A T 3059.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.4877;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.29;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3088,217,0
CP000253.1 2804018 . G A 906.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6828;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:66:935,66,0
CP000253.1 2804030 . C T 261.80 . AC=2;AF=1.00;AN=2;DP=11;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:21:290,21,0
CP000253.1 2804034 . G A 260.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:21:289,21,0
CP000253.1 2804035 . A T 260.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:21:289,21,0
CP000253.1 2804042 . C T 201.81 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.42;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,8:9:20:230,0,20
CP000253.1 2804044 . T A 262.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.20;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:21:291,21,0
CP000253.1 2804047 . A T 262.80 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.20;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:21:291,21,0
CP000253.1 2804060 . T C 201.81 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.42;ReadPosRankSum=1.593;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,8:9:20:230,0,20
CP000253.1 2804063 . T A 230.77 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQ0=0;QD=28.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:9:18:240,18,0
CP000253.1 2804537 . T C 5880.77 . AC=2;AF=1.00;AN=2;DP=222;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.4526;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.49;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,222:222:99:5909,418,0
CP000253.1 2804601 . C G 4544.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.5108;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,189:191:99:4573,325,0
CP000253.1 2804607 . C A 4445.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.779;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.9386;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.03;ReadPosRankSum=-0.487;SOR=0.582 GT:AD:DP:GQ:PL 1/1:1,184:185:99:4474,319,0
CP000253.1 2804609 . G A 4368.77 . AC=2;AF=1.00;AN=2;DP=177;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.5488;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.82;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,176:177:99:4397,310,0
CP000253.1 2804619 . A T 4212.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.832;DP=174;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=17.4564;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.64;ReadPosRankSum=0.091;SOR=0.364 GT:AD:DP:GQ:PL 1/1:1,170:174:99:4241,301,0
CP000253.1 2804622 . C T 4307.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.3505;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.05;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,172:173:99:4336,307,0
CP000253.1 2804634 . A T 4397.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.512;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4577;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.57;ReadPosRankSum=0.316;SOR=1.043 GT:AD:DP:GQ:PL 1/1:2,177:179:99:4426,315,0
CP000253.1 2804655 . T C 4081.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.677;DP=160;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.3509;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.67;ReadPosRankSum=1.678;SOR=0.740 GT:AD:DP:GQ:PL 1/1:2,157:160:99:4110,292,0
CP000253.1 2804656 . C T 3907.77 . AC=2;AF=1.00;AN=2;DP=156;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.4146;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.21;SOR=1.065 GT:AD:DP:GQ:PL 1/1:0,155:156:99:3936,280,0
CP000253.1 2804688 . T C 3647.77 . AC=2;AF=1.00;AN=2;DP=146;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.8924;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.98;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,146:146:99:3676,265,0
CP000253.1 2804693 . G A 3631.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.1573;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.76;SOR=1.187 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3660,259,0
CP000253.1 2804837 . G C 1176.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.02;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,42:42:87:1205,87,0
CP000253.1 2804843 . T G 209.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.97;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:238,18,0
CP000253.1 2804844 . T A 174.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.15;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:203,15,0
CP000253.1 2804845 . A C 203.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.97;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:232,18,0
CP000253.1 2804852 . T A 173.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=28.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:202,15,0
CP000253.1 2804855 . A C 209.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.97;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:238,18,0
CP000253.1 2804860 . T A 214.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.11;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:243,18,0
CP000253.1 2804864 . A T 211.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.09;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:240,18,0
CP000253.1 2804873 . T A 212.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.00;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:241,18,0
CP000253.1 2804875 . T C 201.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:230,18,0
CP000253.1 2804878 . G A 199.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.31;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:228,18,0
CP000253.1 2804879 . G A 205.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.31;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:234,18,0
CP000253.1 2804886 . G A 174.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.15;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:203,15,0
CP000253.1 2804892 . T G 203.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.97;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:232,18,0
CP000253.1 2804895 . T A 174.90 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=29.15;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:15:203,15,0
CP000253.1 2804899 . T A 207.84 . AC=2;AF=1.00;AN=2;DP=6;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=34.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:236,18,0
CP000253.1 2804912 . G T 212.84 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.465;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=30.41;ReadPosRankSum=1.465;SOR=0.527 GT:AD:DP:GQ:PL 1/1:1,6:7:18:241,18,0
CP000253.1 2804919 . C T 232.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:261,21,0
CP000253.1 2804936 . C T 214.84 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.69;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:18:243,18,0
CP000253.1 2804937 . A G 228.80 . AC=2;AF=1.00;AN=2;DP=7;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=32.69;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:257,21,0
CP000253.1 2804941 . A T 337.77 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=33.78;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:30:366,30,0
CP000253.1 2804954 . C A 671.77 . AC=2;AF=1.00;AN=2;DP=22;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7333;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=30.53;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:51:700,51,0
CP000253.1 2805146 . T C 3119.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8879;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.63;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3148,220,0
CP000253.1 2805182 . C T 3299.77 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.6213;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.81;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3328,232,0
CP000253.1 2805185 . T C 3220.76 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4100;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3249,229,0
CP000253.1 2805188 . T C 3220.76 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4945;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3249,226,0
CP000253.1 2805191 . A G 3312.77 . AC=2;AF=1.00;AN=2;DP=134;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4671;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.72;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,134:134:99:3341,232,0
CP000253.1 2805197 . T C 3401.77 . AC=2;AF=1.00;AN=2;DP=141;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,141:141:99:3430,238,0
CP000253.1 2805203 . G C 3339.77 . AC=2;AF=1.00;AN=2;DP=137;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8935;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.38;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,137:137:99:3368,232,0
CP000253.1 2805209 . C T 3323.77 . AC=2;AF=1.00;AN=2;DP=138;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.0200;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.09;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,138:138:99:3352,232,0
CP000253.1 2805221 . G A 3530.77 . AC=2;AF=1.00;AN=2;DP=150;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.0398;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.86;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,148:150:99:3559,247,0
CP000253.1 2805278 . C T 3204.83 . AC=2;AF=1.00;AN=2;DP=133;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=29.3017;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.28;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,132:132:99:3232,223,0
CP000253.1 2805306 . G A 2732.77 . AC=2;AF=1.00;AN=2;DP=114;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.6610;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,110:114:99:2761,199,0
CP000253.1 2805338 . G A 2662.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.1971;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.85;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2691,193,0
CP000253.1 2805490 . C T 2387.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.6152;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.40;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2416,169,0
CP000253.1 2805512 . G T 2555.77 . AC=2;AF=1.00;AN=2;DP=102;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2462;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.06;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2584,181,0
CP000253.1 2805542 . A G 2799.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2752;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.00;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,112:112:99:2828,199,0
CP000253.1 2805873 . T C 2720.77 . AC=2;AF=1.00;AN=2;DP=118;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.0312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.06;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,118:118:99:2749,193,0
CP000253.1 2806018 . G A 1932.77 . AC=2;AF=1.00;AN=2;DP=83;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3026;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.29;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,83:83:99:1961,135,0
CP000253.1 2806023 . G A 1883.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8576;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.15;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1912,132,0
CP000253.1 2806025 . C T 1881.77 . AC=2;AF=1.00;AN=2;DP=78;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=8.8576;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.13;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:78:99:1910,132,0
CP000253.1 2806213 . T C 214.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:243,18,0
CP000253.1 2806477 . A G 968.77 . AC=2;AF=1.00;AN=2;DP=39;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.84;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,39:39:69:997,69,0
CP000253.1 2806498 . C A 1232.77 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.7887;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.17;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:51:87:1261,87,0
CP000253.1 2807363 . A T 1530.77 . AC=2;AF=1.00;AN=2;DP=68;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.51;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,68:68:99:1559,108,0
CP000253.1 2807379 . A T 1645.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.7447;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.51;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,70:72:99:1674,117,0
CP000253.1 2807381 . A C 1641.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.857;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5334;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.80;ReadPosRankSum=1.373;SOR=0.258 GT:AD:DP:GQ:PL 1/1:1,71:72:99:1670,114,0
CP000253.1 2807382 . G A 1676.77 . AC=2;AF=1.00;AN=2;DP=72;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.5334;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.62;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:72:99:1705,117,0
CP000253.1 2807397 . A G 1958.77 . AC=2;AF=1.00;AN=2;DP=85;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6549;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:85:99:1987,135,0
CP000253.1 2807403 . A G 1993.77 . AC=2;AF=1.00;AN=2;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.5925;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.18;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2022,138,0
CP000253.1 2807406 . A T 1874.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.077;DP=86;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7258;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=21.80;ReadPosRankSum=1.767;SOR=0.446 GT:AD:DP:GQ:PL 1/1:3,83:86:94:1903,94,0
CP000253.1 2807415 . A G 2039.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6203;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2068,141,0
CP000253.1 2807418 . A G 2042.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.48;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2071,141,0
CP000253.1 2807424 . G A 2075.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.32;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2104,144,0
CP000253.1 2807430 . T C 2004.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.04;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2033,138,0
CP000253.1 2807433 . A G 2023.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.26;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2052,141,0
CP000253.1 2807436 . T A 2043.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.49;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2072,141,0
CP000253.1 2807454 . A G 2032.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.37;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2061,141,0
CP000253.1 2807457 . T A 2040.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.46;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2069,141,0
CP000253.1 2807459 . A T 1995.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.94;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2024,138,0
CP000253.1 2807460 . T A 2039.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2068,141,0
CP000253.1 2807469 . T G 2204.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.9947;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.45;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2233,154,0
CP000253.1 2807546 . C T 2067.77 . AC=2;AF=1.00;AN=2;DP=87;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7608;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2096,144,0
CP000253.1 2807730 . A G 150.03 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=16.67;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:12:178,12,0
CP000253.1 2807845 . G T 345.78 . AC=2;AF=1.00;AN=2;DP=15;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.05;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:27:374,27,0
CP000253.1 2807993 . G A 1651.77 . AC=2;AF=1.00;AN=2;DP=63;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.22;SOR=1.467 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1680,120,0
CP000253.1 2808233 . C T 4830.77 . AC=2;AF=1.00;AN=2;DP=208;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=20.2218;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,207:208:99:4859,337,0
CP000253.1 2808287 . C T 4575.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.586;DP=186;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=27.3791;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.87;ReadPosRankSum=-1.402;SOR=0.715 GT:AD:DP:GQ:PL 1/1:2,182:186:99:4604,325,0
CP000253.1 2808290 . T C 4445.77 . AC=2;AF=1.00;AN=2;DP=185;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.1142;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.43;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,182:185:99:4474,319,0
CP000253.1 2808335 . G A 3867.77 . AC=2;AF=1.00;AN=2;DP=157;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=23.4794;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.12;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,154:157:99:3896,280,0
CP000253.1 2808365 . C T 3820.77 . AC=2;AF=1.00;AN=2;DP=142;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1365;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.91;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,142:142:99:3849,280,0
CP000253.1 2808368 . G T 4111.77 . AC=2;AF=1.00;AN=2;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4951;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.78;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4140,301,0
CP000253.1 2808975 . A G 2410.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6786;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.11;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2439,175,0
CP000253.1 2809065 . C T 2766.77 . AC=2;AF=1.00;AN=2;DP=121;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.87;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,121:121:99:2795,193,0
CP000253.1 2809407 . T A 3669.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.7882;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.99;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3698,256,0
CP000253.1 2809410 . G A 3679.77 . AC=2;AF=1.00;AN=2;DP=153;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4704;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.05;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,153:153:99:3708,256,0
CP000253.1 2809413 . C T 3792.77 . AC=2;AF=1.00;AN=2;DP=154;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2038;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.63;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,154:154:99:3821,265,0
CP000253.1 2809467 . T A 4084.77 . AC=2;AF=1.00;AN=2;DP=175;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.2229;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.34;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,175:175:99:4113,283,0
CP000253.1 2809506 . T A 4050.77 . AC=2;AF=1.00;AN=2;DP=179;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.9173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.63;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,179:179:99:4079,277,0
CP000253.1 2809518 . A T 4059.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.43;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,181:181:99:4088,280,0
CP000253.1 2809530 . A T 4064.77 . AC=2;AF=1.00;AN=2;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.6326;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.58;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,180:181:99:4093,280,0
CP000253.1 2809554 . C A 4125.77 . AC=2;AF=1.00;AN=2;DP=180;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.5503;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.92;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,180:180:99:4154,286,0
CP000253.1 2809566 . C T 4414.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.944;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.5331;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.76;ReadPosRankSum=0.599;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,193:194:99:4443,304,0
CP000253.1 2809585 . A C 4400.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.581;DP=194;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7977;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=22.80;ReadPosRankSum=-2.141;SOR=0.237 GT:AD:DP:GQ:PL 1/1:2,191:194:99:4429,304,0
CP000253.1 2809602 . C G 4506.77 . AC=2;AF=1.00;AN=2;DP=191;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.1337;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.60;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,191:191:99:4535,313,0
CP000253.1 2809659 . T C 4347.77 . AC=2;AF=1.00;AN=2;DP=184;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.0762;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.76;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,183:184:99:4376,304,0
CP000253.1 2809827 . T A 1371.77 . AC=2;AF=1.00;AN=2;DP=59;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.1311;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:59:99:1400,99,0
CP000253.1 2809878 . T A 1080.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.2482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.73;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1109,78,0
CP000253.1 2809881 . T A 1063.77 . AC=2;AF=1.00;AN=2;DP=42;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.5929;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.33;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:78:1092,78,0
CP000253.1 2809900 . T G 906.77 . AC=2;AF=1.00;AN=2;DP=36;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:66:935,66,0
CP000253.1 2809938 . G A 720.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8321;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.85;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:749,54,0
CP000253.1 2809941 . G T 742.77 . AC=2;AF=1.00;AN=2;DP=28;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.53;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:57:771,57,0
CP000253.1 2809989 . T A 1111.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.869;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2570;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.71;ReadPosRankSum=-0.887;SOR=0.352 GT:AD:DP:GQ:PL 1/1:1,44:45:81:1140,81,0
CP000253.1 2810033 . A G 1488.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.767;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6274;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.41;ReadPosRankSum=0.171;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,60:61:99:1517,108,0
CP000253.1 2810071 . A G 1571.77 . AC=2;AF=1.00;AN=2;DP=64;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8667;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.56;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1600,114,0
CP000253.1 2810211 . G T 1310.77 . AC=2;AF=1.00;AN=2;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4662;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.41;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:93:1339,93,0
CP000253.1 2810581 . A G 606.77 . AC=2;AF=1.00;AN=2;DP=25;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.4545;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.28;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:25:45:635,45,0
CP000253.1 2810646 . T G 365.22 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.403;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.77;MQ0=0;MQRankSum=0.000;QD=21.48;ReadPosRankSum=-1.543;SOR=0.330 GT:AD:DP:GQ:PL 1/1:1,16:17:4:392,4,0
CP000253.1 2810681 . T C 227.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.43;MQ0=0;QD=22.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:256,18,0
CP000253.1 2810689 . A T 218.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.04;MQ0=0;QD=27.35;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:247,18,0
CP000253.1 2810690 . G A 222.84 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.04;MQ0=0;QD=27.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:18:251,18,0
CP000253.1 2810741 . T C 223.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.91;MQ0=2;QD=22.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,10:10:18:252,18,0
CP000253.1 2810780 . C G 210.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=2.546;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=50.16;MQ0=2;MQRankSum=-1.266;QD=15.06;ReadPosRankSum=2.272;SOR=1.085 GT:AD:DP:GQ:PL 0/1:2,12:14:24:239,0,24
CP000253.1 2810790 . A G 210.78 . AC=1;AF=0.500;AN=2;BaseQRankSum=1.662;DP=14;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=1;MLEAF=0.500;MQ=50.16;MQ0=2;MQRankSum=-1.266;QD=15.06;ReadPosRankSum=1.414;SOR=1.085 GT:AD:DP:GQ:PL 0/1:2,12:14:24:239,0,24
CP000253.1 2810795 . A G 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.94;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2810796 . C A 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.94;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2810807 . A C 231.84 . AC=2;AF=1.00;AN=2;DP=10;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=52.94;MQ0=0;QD=23.18;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:18:260,18,0
CP000253.1 2810814 . T G 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.02;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2810815 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.02;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2810817 . T G 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.02;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2810819 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.02;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2810831 . G T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.02;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2810837 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=51.02;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2810864 . C T 151.03 . AC=2;AF=1.00;AN=2;DP=8;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.8941;MLEAC=2;MLEAF=1.00;MQ=51.02;MQ0=0;QD=18.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:12:179,12,0
CP000253.1 2812495 . T C 363.78 . AC=2;AF=1.00;AN=2;DP=17;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=56.04;MQ0=0;QD=21.40;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:27:392,27,0
CP000253.1 2812534 . C G 675.77 . AC=2;AF=1.00;AN=2;DP=30;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=57.79;MQ0=0;QD=22.53;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:48:704,48,0
CP000253.1 2812544 . A G 764.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.05;MQ0=0;QD=22.49;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:54:793,54,0
CP000253.1 2812549 . A G 768.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.05;MQ0=0;QD=22.61;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:54:797,54,0
CP000253.1 2812550 . C A 768.77 . AC=2;AF=1.00;AN=2;DP=34;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.05;MQ0=0;QD=22.61;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:54:797,54,0
CP000253.1 2812561 . A C 986.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.50;MQ0=0;QD=22.43;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1015,69,0
CP000253.1 2812568 . T G 988.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.50;MQ0=0;QD=22.47;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1017,69,0
CP000253.1 2812569 . C T 983.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.50;MQ0=0;QD=22.36;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1012,69,0
CP000253.1 2812571 . T G 992.77 . AC=2;AF=1.00;AN=2;DP=44;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.50;MQ0=0;QD=22.56;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:69:1021,69,0
CP000253.1 2812573 . C T 997.77 . AC=2;AF=1.00;AN=2;DP=45;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.53;MQ0=0;QD=22.17;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:69:1026,69,0
CP000253.1 2812585 . G T 1637.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.39;MQ0=0;QD=22.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1666,114,0
CP000253.1 2812591 . C T 1687.77 . AC=2;AF=1.00;AN=2;DP=76;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.43;MQ0=0;QD=22.21;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,76:76:99:1716,117,0
CP000253.1 2812616 . T G 1976.77 . AC=2;AF=1.00;AN=2;DP=89;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.38;MQ0=0;QD=22.21;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2005,135,0
CP000253.1 2812648 . C T 2098.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=58.43;MQ0=0;QD=22.81;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2127,144,0
CP000253.1 2812651 . G A 2079.77 . AC=2;AF=1.00;AN=2;DP=92;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8874;MLEAC=2;MLEAF=1.00;MQ=58.43;MQ0=0;QD=22.61;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2108,144,0
CP000253.1 2812669 . T C 2109.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.04;MQ0=0;QD=22.44;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2138,147,0
CP000253.1 2812673 . G T 2189.77 . AC=2;AF=1.00;AN=2;DP=96;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=59.06;MQ0=0;QD=22.81;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2218,151,0
CP000253.1 2812721 . G A 1952.77 . AC=2;AF=1.00;AN=2;DP=88;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4671;MLEAC=2;MLEAF=1.00;MQ=59.93;MQ0=0;QD=22.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,88:88:99:1981,135,0
CP000253.1 2812745 . G A 1868.77 . AC=2;AF=1.00;AN=2;DP=84;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.8519;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.52;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,83:84:99:1897,129,0
CP000253.1 2812761 . A G 1686.77 . AC=2;AF=1.00;AN=2;DP=75;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.8800;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.49;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:1715,117,0
CP000253.1 2812775 . A T 1293.77 . AC=2;AF=1.00;AN=2;DP=57;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.3727;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.70;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,57:57:90:1322,90,0
CP000253.1 2812878 . T A 190.90 . AC=2;AF=1.00;AN=2;DP=9;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=2.6820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=21.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:15:219,15,0
CP000253.1 2813033 . C T 1174.77 . AC=2;AF=1.00;AN=2;DP=49;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.97;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,49:49:84:1203,84,0
CP000253.1 2813256 . C A 1426.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.39;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1455,102,0
CP000253.1 2813360 . G A 735.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:764,54,0
CP000253.1 2813365 . C G 742.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.61;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:771,54,0
CP000253.1 2813367 . C T 735.77 . AC=2;AF=1.00;AN=2;DP=29;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.37;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,29:29:54:764,54,0
CP000253.1 2813394 . A T 1481.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.820;DP=56;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.4435;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.46;ReadPosRankSum=1.562;SOR=1.023 GT:AD:DP:GQ:PL 1/1:1,55:56:99:1510,111,0
CP000253.1 2813435 . A G 2351.77 . AC=2;AF=1.00;AN=2;DP=97;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.7482;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.02;SOR=1.029 GT:AD:DP:GQ:PL 1/1:0,94:97:99:2380,172,0
CP000253.1 2813619 . C T 4121.77 . AC=2;AF=1.00;AN=2;DP=173;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.4631;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.83;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,173:173:99:4150,289,0
CP000253.1 2813723 . G A 3411.77 . AC=2;AF=1.00;AN=2;DP=139;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=10.6296;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.55;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,139:139:99:3440,241,0
CP000253.1 2813749 . G A 3212.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.976;DP=131;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2451;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.71;ReadPosRankSum=-1.613;SOR=0.553 GT:AD:DP:GQ:PL 1/1:1,129:131:99:3241,229,0
CP000253.1 2813791 . A G 2636.77 . AC=2;AF=1.00;AN=2;DP=109;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=9.7723;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.41;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,108:109:99:2665,190,0
CP000253.1 2813999 . G C 4461.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.385;DP=181;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.8898;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.65;ReadPosRankSum=-0.584;SOR=0.170 GT:AD:DP:GQ:PL 1/1:2,179:181:99:4490,284,0
CP000253.1 2814003 . A G 4416.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.112;DP=179;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=33.6818;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.81;ReadPosRankSum=-1.314;SOR=0.364 GT:AD:DP:GQ:PL 1/1:1,177:178:99:4445,311,0
CP000253.1 2814004 . A T 4432.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.662;DP=179;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=32.6820;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.90;ReadPosRankSum=-1.314;SOR=0.364 GT:AD:DP:GQ:PL 1/1:1,177:178:99:4461,313,0
CP000253.1 2814006 . C A 4372.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.053;DP=179;Dels=0.01;ExcessHet=3.0103;FS=0.000;HaplotypeScore=37.3580;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.70;ReadPosRankSum=-0.312;SOR=1.017 GT:AD:DP:GQ:PL 1/1:2,175:177:99:4401,307,0
CP000253.1 2814087 . G A 6728.77 . AC=2;AF=1.00;AN=2;DP=249;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.2377;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=27.13;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,248:249:99:6757,488,0
CP000253.1 2814322 . C T 5790.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.766;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=15.7019;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=25.18;ReadPosRankSum=-1.718;SOR=0.707 GT:AD:DP:GQ:PL 1/1:1,229:230:99:5819,412,0
CP000253.1 2814615 . T A 803.77 . AC=2;AF=1.00;AN=2;DP=33;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=1.6988;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.36;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:60:832,60,0
CP000253.1 2814702 . G A 1595.77 . AC=2;AF=1.00;AN=2;DP=61;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=26.16;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1624,114,0
CP000253.1 2814759 . G A 1969.77 . AC=2;AF=1.00;AN=2;DP=80;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.0716;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.62;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:80:99:1998,138,0
CP000253.1 2815172 . A G 2448.77 . AC=2;AF=1.00;AN=2;DP=104;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=4.4073;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.77;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:104:99:2477,172,0
CP000253.1 2815245 . A G 2121.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.642;DP=241;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=16.0413;MLEAC=1;MLEAF=0.500;MQ=48.08;MQ0=12;MQRankSum=-11.896;QD=8.84;ReadPosRankSum=-8.726;SOR=0.727 GT:AD:DP:GQ:PL 0/1:106,134:241:99:2150,0,2211
CP000253.1 2815292 . G A 2173.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.014;DP=235;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.0586;MLEAC=1;MLEAF=0.500;MQ=47.26;MQ0=13;MQRankSum=-7.466;QD=9.29;ReadPosRankSum=6.789;SOR=0.641 GT:AD:DP:GQ:PL 0/1:130,104:235:99:2202,0,2110
CP000253.1 2815347 . A C 1570.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.400;DP=129;Dels=0.00;ExcessHet=3.0103;FS=0.670;HaplotypeScore=9.9708;MLEAC=1;MLEAF=0.500;MQ=49.71;MQ0=0;MQRankSum=-8.421;QD=12.18;ReadPosRankSum=7.767;SOR=0.910 GT:AD:DP:GQ:PL 0/1:60,69:129:99:1599,0,1272
CP000253.1 2815544 . A G 1860.77 . AC=2;AF=1.00;AN=2;DP=73;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=6.2312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.84;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,72:73:99:1889,135,0
CP000253.1 2815689 . C T 2896.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.805;DP=110;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.4248;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=26.33;ReadPosRankSum=1.387;SOR=0.405 GT:AD:DP:GQ:PL 1/1:1,109:110:99:2925,211,0
CP000253.1 2815728 . G A 2783.77 . AC=2;AF=1.00;AN=2;DP=112;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=14.8628;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.31;SOR=1.069 GT:AD:DP:GQ:PL 1/1:0,110:112:99:2812,205,0
CP000253.1 2815761 . A G 3590.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.708;DP=148;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=19.2832;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-1.520;SOR=0.835 GT:AD:DP:GQ:PL 1/1:1,144:148:99:3619,262,0
CP000253.1 2816403 . A G 3710.77 . AC=2;AF=1.00;AN=2;DP=151;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=18.1618;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.74;SOR=1.027 GT:AD:DP:GQ:PL 1/1:0,150:151:99:3739,268,0
CP000253.1 2816474 . C T 4725.77 . AC=2;AF=1.00;AN=2;DP=188;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=24.4252;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.27;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,187:188:99:4754,334,0
CP000253.1 2816496 . A G 4969.77 . AC=2;AF=1.00;AN=2;DP=200;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=12.1940;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.10;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,198:200:99:4998,352,0
CP000253.1 2816591 . C T 5515.77 . AC=2;AF=1.00;AN=2;DP=234;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=21.5814;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.67;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,233:234:99:5544,388,0
CP000253.1 2816613 . T C 5395.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.514;DP=230;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=31.7948;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.77;ReadPosRankSum=0.362;SOR=0.814 GT:AD:DP:GQ:PL 1/1:2,225:230:99:5424,385,0
CP000253.1 2817029 . G C 471.77 . AC=2;AF=1.00;AN=2;DP=21;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.47;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:36:500,36,0
CP000253.1 2817385 . G T 1155.77 . AC=2;AF=1.00;AN=2;DP=46;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.7494;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.13;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,46:46:84:1184,84,0
CP000253.1 2817476 . A G 4120.77 . AC=2;AF=1.00;AN=2;DP=168;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.2173;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.53;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,168:168:99:4149,292,0
CP000253.1 2817577 . T G 5832.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.817;DP=250;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=13.0176;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;MQRankSum=0.000;QD=23.33;ReadPosRankSum=-1.275;SOR=0.233 GT:AD:DP:GQ:PL 1/1:1,249:250:99:5861,409,0
CP000253.1 2818787 . A G 2940.77 . AC=2;AF=1.00;AN=2;DP=132;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=7.6300;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.80;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,129:132:99:2969,208,0
CP000253.1 2818997 . G A 2216.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.4678;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.58;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2245,157,0
CP000253.1 2819558 . A G 1765.77 . AC=2;AF=1.00;AN=2;DP=69;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.6656;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.97;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:69:99:1794,126,0
CP000253.1 2819630 . A T 1907.77 . AC=2;AF=1.00;AN=2;DP=74;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=3.6515;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=25.78;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,74:74:99:1936,135,0
CP000253.1 2819753 . A G 3190.85 . AC=2;AF=1.00;AN=2;DP=135;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=11.7769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=23.81;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,134:135:99:3219,226,0
CP000253.1 2820498 . T C 2293.77 . AC=2;AF=1.00;AN=2;DP=94;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=5.2680;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=24.40;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2322,163,0
CP000253.1 2821311 . A T 410.77 . AC=2;AF=1.00;AN=2;DP=18;Dels=0.00;ExcessHet=3.0103;FS=0.000;HaplotypeScore=0.0000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQ0=0;QD=22.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,18:18:30:439,30,0