https://github.com/fizquierdo/perpetually-updated-trees
Tip revision: 67ab459a060fb6d7ac0e23c98b596c9c4fb82521 authored by Fernando Izquierdo on 28 August 2014, 19:15:46 UTC
added -p seed to scoring step
added -p seed to scoring step
Tip revision: 67ab459
lonicera_23taxa.rbcL.phy
23 1408
Lonicera_maackii ----------gttggattcaaagcgggtgttaaagagtacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggctgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaactcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggtcgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccatttttaaagcacaaactgaaacaggtgaaatcaaagggca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_japonica taaagcaagtgttggattcaaagcgggtgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtctcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttttaaagcacaagttgaaacaggtgaaatcaaagggcattacttgaatgctactgcaggtacatgtgaagaaatgatcaaaagggctgtatttgccagagaattgggagttcctatcgtaatgcacgactacttaacagggggattcactgcaaataccagcctggctcactattgccgagataatggcctacttcttcacatccaccgtgcaatgcatgcagttattgatagacagaagaatcatggtatacactttcgtgtactagctaaagcgttacgtatgtctggtggagatcatattcactccggtaccgtagtaggtaaacttgaaggggaaagagagatcactttgggctttgttgatttactgcgcgatgattttattgaaaaagatcgaagtcgcggtatttatttcactcaagattgggtctctctaccgggtgttctgcccgtggcttcggggggtattcacgtttggcatatgcccgctttgaccgagatctttggagatgattccgtcctacagttcggcggaggaactttaggacacccttggggaaatgcacctggtgccgtagctaatcgagtcgctctagaagcatgtgtacaagctcgtaatgaggggcgtgatcttgctcgtgacggtaatgaaattatccgtagggctagcaaatggagtcctgaactagctgctgcttgtgaggtatggaaggagatcaaatttgaatttcaagcaatggatactttgtaa
Lonicera_hispida -------------------------ggcgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggtcgccccctgttgggatgtactattaaacctaaattggggttatccgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_rupicola -------------------------ggtgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaagtcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagcactgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_trichosantha -------------------------ggtgttaaagagtacaaattaacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggctgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggtcgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_trichosantha_var__trichosantha -------------------------ggtgttaaagagtacaaattaacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggctgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggtcgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_webbiana -------------------------ggtgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatccgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_nervosa taaagcaagtgttggattcaaagctggtgttaaagagtacaaattgacttattatactcctgagtaccaaaccaaggatactgatatattggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggctgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggngatgctaccacatcgagcccgttgctggagaagaaactcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttggnttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggtcgtcccctgttnnnatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccatttttaaagcacaaactgaaacaggtgaaatcaaagggcattacttgaatgctactgcaggtacatgtgaagacatgatgaaaagggctgtatttgccagagaattgggagttcctatcgtaatgcacgactacttaacagggggattcactgcaaataccaccttggctcactattgccgagataatggcctacttcttcacatccaccgcgcaatgcatgcagttattgatagacagaagaatcatggtatgcactttcgtgtactagctaaagcgttacgtatgtctggtggagatcatattcacgccggtaccgtagtaggtaaacttgaaggggaaagagaaatcactttgggctttgttgatttactgcgtgatgattttattgaaaaggatcgaagtcgcggtatttatttcactcaagattgggtctctctaccgggtgttctgcccgtggcttcggggggtattcacgtttggcatatgccngctttgaccgagatctttggagatgattccgtcctacagttcggcggaggaactttaggacacccttggnnaaatgcacctggtgccgtagctaatcgagtcgctctagaagcatgtgtaaaagctcgtaatgaaggacgtgatcttgctcaggaaggtaatgaaattattcgcgaggcttgcaaatggagcccggaactagctgctgcttgtgaagtatggaaagagatcgtatttaattttgcagcagtggacgttttgtaa
Lonicera_reticulata ------aagtgttggattcaaagctggtgttaaagagtacaaattgacttattatactcctgagtaccaaaccaaggatactgatatattggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggctgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggngatgctaccacatcgagcccgttgctggagaagaaactcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttggnttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggtcgtcccctgttnnnatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccatttttaaagcacaaactgaaacaggtgaaatcaaagggcattacttgaatgctactgcaggtacatgtgaagacatgatgaaaagggctgtatttgccagagaattgggagttcctatcgtaatgcacgactacttaacagggggattcactgcaaataccaccttggctcactattgccgagataatggcctacttcttcacatccaccgcgcaatgcatgcagttattgatagacagaagaatcatggtatgcactttcgtgtactagctaaagcgttacgtatgtctggtggagatcatattcacgccggtaccgtagtaggtaaacttgaaggggaaagagaaatcactttgggctttgttgatttactgcgtgatgattttattgaaaaggatcgaagtcgcggtatttatttcactcaagattgggtctctctaccgggtgttctgcccgtggcttcggggggtattcacgtttggcatatgccngctttgaccgagatctttggagatgattccgtcctacagttcggcggaggaactttaggacacccttggnnaaatgcacctggtgccgtagctaatcgagtcgctctagaagcatgtgtaaaagctcgtaatgaaggacgtgatcttgctcaggaaggtaatgaaattattcgcgaggcttgcaaatggagcccggaactagctgctgcttgtgaagtatggaaagagatcgtatttaattttgcagcagtggacgttttggat
Lonicera_fulvotomentosa ---------------------------------------------------------------------------------------------------------------------------------------agcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaggggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtctcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttttaaagcacaagttgaaacaggtgaaatcaaaggtcattacttgaatgctactgcaggtacatgtgaagaaatgatgaaaagggctgtatttgccagagaattgggagttcctatcgtaatgcacgactacttaacagggggattcactgcaaataccaccctggctcactattgccgagataatggcctacttcttcacatccaccgtgcaatgcatgcagttattgatagacagaagaatcatggtatacactttcgtgtactagctaaagcgttacgtatgtctggtggagatcatattcacgccggtaccgtagtaggtaaacttgaaggggaaagagagatcactttgggctttgttgatttactgcgcgatgattttattgaaaaagatcgaagtcgcggtatttatttcactcaagattgggtctctctaccgggtgttctgcccgtggcttcggggggtattcacgtttggcatatgcccgctttgaccgagatctttggagatgattccgtcctacagttcggcggaggaactttaggacacccttggggaaatgcacctggtgccgtagctaatcgagtcgctctagaagcatgtgtacaagctcg----------------------------------------------------------------------------------------------------------------------------------------
Lonicera_macranthoides ---------------------------------------------------------------------------------------------------------------------------------------agcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtctcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttttaaagcacaagttgaaacaggtgaaatcaaagggcattacttgaatgctactgcaggtacatgtgaagaaatgatgaaaagggctgtatttgccagagaattgggagctcctatcataatgcacgactacttaacagggggattcactgcaaataccaccctggctcactattgccgagataatggcctacttcttcacatccaccgtgcaatgcatgcagttattgatagacagaagaatcatggtatgcactttcgtgtactagctaaagggttacgtatgtctggtggagatcatattcatgccggtaccgtagtaggtaaacttgaaggggaaagagagatcactttgggctttgttgatttactgcgcgatgattttattgaaaaagatcgaagtcgcggtatttatttcactcaagattgggtctctctaccgggtgttctgcccgtggcttcggggggtattcatgtttggcatatgcccgctttgaccgagatctttggagatgattccgtcctacagttcggcggaggaactttaggacacccttggggaaatgcacctggtgccgtagctaatcgagtcgctctagaagcatgtgtacaagctcg----------------------------------------------------------------------------------------------------------------------------------------
Lonicera_confusa ---------------------------------------------------------------------------------------------------------------------------------------agcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtctcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttttaaagcacaagttgaaacaggtgaaatcaaagggcattacttgaatgctactgcaggtacatgtgaagaaatgatgaaaagggctgtatttgccagagaattgggagctcctatcataatgcacgactacttaacagggggattcactgcaaataccaccctggctcactattgccgagataatggcctacttcttcacatccaccgtgcaatgcatgcagttattgatagacagaagaatcatggtatgcactttcgtgtactagctaaagggttacgtatgtctggtggagatcatattcatgccggtaccgtagtaggtaaacttgaaggggaaagagagatcactttgggctttgttgatttactgcgcgatgattttattgaaaaagatcgaagtcgcggtatttatttcactcaagattgggtctctctaccgggtgttctgcccgtggcttcggggggtattcacgtttggcatatgcccgctttgaccgagatctttggagatgattccgtcctacagttcggcggaggaactttaggacacccttggggaaatgcacctggtgccgtagctaatcgagtcgctctagaagcatgtgtacaagctcg----------------------------------------------------------------------------------------------------------------------------------------
Lonicera_hypoglauca ---------------------------------------------------------------------------------------------------------------------------------------agcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtctcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttttaaagcacaagttgaaacaggtgaaatcaaagggcattacttgaatgctactgcaggtacatgtgaagaaatgatgaaaagggctgtatttgccagagaattgggagctcctatcataatgcacgactacttaacagggggattcactgcaaataccaccctggctcactattgccgagataatggcctacttcttcacatccaccgtgcaatgcatgcagttattgatagacagaagaatcatggtatgcactttcgtgtactagctaaagggttacgtatgtctggtggagatcatattcatgccggtaccgtagtaggtaaacttgaaggggaaagagagatcactttgggctttgttgatttactgcgcgatgattttattgaaaaagatcgaagtcgcggtatttatttcactcaagattgggtctctctaccgggtgttctgcccgtggcttcggggggtattcatgtttggcatatgcccgctttgaccgagatctttggagatgattccgtcctacagttcggcggaggaactttaggacacccttggggaaatgcacctggtgccgtagctaatcgagtcgctctagaagcatgtgtacaagctcg----------------------------------------------------------------------------------------------------------------------------------------
Lonicera_japonica_var__chinensis taaagcaagtgttggattcaaagcgggtgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtctcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactctcaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttttaaagcacaagttgaaacaggtgaaatcaaagggcattacttgaat---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_acuminata taaagcaagtgttggattcaaagcgggtgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtctcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttttaaagcacaagttgaaacaggtgaaatcaaagggcattacttgaat---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_dasystyla taaagcaagtgttggattcaaagcgggtgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtctcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttttaaagcacaagttgaaacaggtgaaatcaaagggcattacttgaat---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_similis taaagcaagtgttggattcaaagcgggtgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttttaaagcacaagttgaaacaggtgaaatcaaagggcattacttgaat---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_canadensis ------aagtgttggattcaaagcgggcgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaagtcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccattt---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_hirsuta ------aagtgttggattcaaagcgggtgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccaaccttgatcgttacaaaggtcgatgctaccacatcgagcccgttgctggagaagaaactcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccttgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcagtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccattt---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_tatarica ------aagtgttggattcaaagcgggtgttaaagagtacaaattgacttattatactcctgaatatgaaaccaaagatactgatatcttggcagcattccgagtaactccccaacccggagttccgcctgaagaagcgggggctgcggtagctgctgaatcttccaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttcctggagaagaaagtcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggtcgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccattt---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_orientalis ------aagtgttggattcaaagcgggtgttaaagattacaaattgacttattatactcctgaatatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctacggcatcgagcccgttgctggagaagaaaatcaatatattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgctgcttatgttaaaactttccaaggcccgcctcatgggattcaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttataaagcacaaactgaaacaggtgaaatcaaagggcattacttgaatgctactgcaggtacatgtgaagaaatgatcaaaagggctgtatttgccagagaattgggagttcctatcgtaatgcacgactacttaacagggggattcactgcaaataccaccttggctcactattgccgagataatggcctacttctttacatccaccgcgcaatgcatgcagttattgatagacagaagaatcatggtatccatttccgcgtactagcaaaagcgttacgtatgtctggtggagatcatattcacgccggtaccgtagtaggtaaacttgaaggggaaagagaaatcactttgggctttgttgatttactgcgcgatgattttattgaaaaagatcgaagtcgcggtatttatttcactcaagattgggtctctctaccgggtgttctgcccgtggcttcggggggtattcacgtttggcatatgcccgctttgaccgagatctttggagatgattccgtcctacagttcggcggaggaactttaggacacccttggggaaatgcacctggtgccgtagctaatcgagtcgctctagaagcatgtgtacaagctcgtaatgaggggcgtgatcttgctcgtgacggtaatgaaattatccgtgcggcttgcaaatggagtcctgaactagctgctgcttgtgaggtatggaaggagatcaaatttgaatttgaagctatggatactttgtaa
Lonicera_albiflora -------------------------------------------ttgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagatgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaaggtcgatgctaccacatcgagcccgttgctggagaagaaactcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtcgcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccttgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcagtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattttgtgccgaagccctttataaagcacaagctgaaacaggtgaaatcaaagggcattacttgatg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Lonicera_periclymenum ------aagtgttggattcaaagcgggtgttaaagattacaaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattccgagtaactcctcaacccggagttccgcctgaagaagcgggggccgcggtagctgctgaatcttcaaccggtacatggacaactgtgtggaccgatggacttaccagccttgatcgttacaaagggcgatgctaccacatcgagcccgttgctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctattgtgggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatccctgtctcttatgttaaaactttccaaggcccgcctcatggtatccaagttgagagagataaattgaacaagtacggccgccccctgttgggatgtactattaaacctaaattggggttatctgctaaaaactacggtagggcggttt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
