# Copyright (c) 2016 Jona Sassenhagen and Phillip Alday
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program.  If not, see <http://www.gnu.org/

paper=nuisance_failure

.PHONY: pdf docx draft draft_pdf draft_docx

pdf: $(paper).pdf

docx: $(paper).docx

tex: $(paper).tex

draft: draft_pdf draft_docx draft_tex

draft_pdf: $(paper).pdf
	cp $(paper).pdf $(paper)_`git show -s --format=%ci HEAD | awk '{print $$1}'`_`git rev-parse --short HEAD`.pdf

draft_docx: $(paper).docx
	cp $(paper).docx $(paper)_`git show -s --format=%ci HEAD | awk '{print $$1}'`_`git rev-parse --short HEAD`.docx

draft_tex: $(paper).tex
	cp $(paper).tex $(paper)_`git show -s --format=%ci HEAD | awk '{print $$1}'`_`git rev-parse --short HEAD`.tex

$(paper).docx: $(paper).tex template.docx
	pandoc -o $@ $< --reference-docx=template.docx

$(paper).pdf: $(paper).md methods.tex references.bib
	pandoc -o $@ $< --include-after-body=methods.tex -N --bibliography=references.bib

$(paper).tex: $(paper).md methods.tex references.bib
	pandoc -o $@ $< --include-after-body=methods.tex -N --bibliography=references.bib

clean:
	rm -f $(paper)*.{pdf,docx,tex,html,rst}
	rm -f $(paper)_full.md
	rm -f methods.{pdf,docx,tex,html,rst}

%.tex: %.md
	pandoc -o $@ $<

%.docx: %.md
	pandoc -o $@ $<

%.html: %.md
	pandoc -o $@ $<

%.rst: %.md
	pandoc -o $@ $<

statfail_simul.pdf: simulation.py
	python simulation.py