[![Iroki](https://github.com/mooreryan/iroki_web/blob/master/public/iroki_logo3.png)](https://github.com/mooreryan/iroki_web/blob/master/public/iroki_logo3.png)

# Iroki

Rails 5 source for the [Iroki webapp](https://www.iroki.net), a viewer and customizer for phylogenetic trees.

## Citation

If you find Iroki useful in your research, please cite the [Iroki manuscript](https://doi.org/10.7717/peerj.8584).  Thank you!!


> Moore RM, Harrison AO, McAllister SM, Polson SW, Wommack KE. 2020. Iroki: automatic customization and visualization of phylogenetic trees. PeerJ 8:e8584 https://doi.org/10.7717/peerj.8584

You can also download the citation and import it into your favorite reference manager!

- [BibTeX](https://raw.githubusercontent.com/mooreryan/iroki/master/manuscript_citation/peerj-8584.bib)
- [RIS | Zotero | Mendeley](https://raw.githubusercontent.com/mooreryan/iroki/master/manuscript_citation/peerj-8584.ris)

### Manuscript

Iroki has been published!  Check out the [manuscript on PeerJ](https://doi.org/10.7717/peerj.8584)!

## Documentation

Please see the [the docs](https://www.iroki.net/docs) for info on how to run Iroki.