https://github.com/sanger-pathogens/assembly-stats
Tip revision: 7bdb58b8d0c5289e7f13785d826abcdf3678e126 authored by Florent Lassalle on 09 May 2023, 10:51:04 UTC
Update README.md
Update README.md
Tip revision: 7bdb58b
Dockerfile
FROM ubuntu:18.04
ARG DEBIAN_FRONTEND=noninteractive
ARG BUILD_DIR=/usr/local/assembly-stats
# Install the dependancies
RUN apt-get update && \
apt-get install --yes apt-utils && \
apt-get --yes upgrade && \
apt-get install --yes build-essential cmake
RUN apt-get install -y locales && \
sed -i -e 's/# \(en_GB\.UTF-8 .*\)/\1/' /etc/locale.gen && \
touch /usr/share/locale/locale.alias && \
locale-gen
ENV LANG en_GB.UTF-8
ENV LANGUAGE en_GB:en
ENV LC_ALL en_GB.UTF-8
COPY . ${BUILD_DIR}
RUN cd ${BUILD_DIR} && \
mkdir build && \
cd build && \
cmake .. && \
make && \
make test && \
make install
RUN cd ${BUILD_DIR}/build && \
make clean && \
cd .. && \
rm -r build && \
apt-get remove --yes build-essential cmake
CMD echo "Usage: docker run -v \`pwd\`:/var/data -it <IMAGE_NAME> bash"; \
echo ""; \
echo "This will place you in a shell with your current working directory accessible as /var/data."; \
echo "" ;\
echo "For help:"; \
echo " assembly-stats"