https://github.com/sorgerlab/cycif
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Tip revision: 214d60f5c35ea5cf65f1bb27c19d1caaae9db0de authored by Jerry Lin on 05 May 2019, 03:22:41 UTC
A3&A4 scripts: processing & quantify Ashlar tiff
Tip revision: 214d60f
CycIF_rename_rcpnl.m
%% CycIF rename rcpnl files
%% Jerry Lin 2017/03/05

mypath= uigetdir('Z:\data\RareCyte\pPD1');

cd(mypath);
list1 = dir('*.rcpnl');
[~,index] = sortrows({list1.datenum}.'); 
list1 = list1(index); 
clear index;
table1 = struct2table(list1);

temp1 = table1.name;

for i=1:size(table1,1)
    temp1(i) = {strcat('Cycle',num2str(i),'.rcpnl')};
end

table1.newname = temp1;
writetable(table1,'allnames.txt');

for i =1:size(table1,1)
    movefile(table1.name{i},table1.newname{i});
    disp(table1.name{i});
    disp(table1.newname{i}); 
end
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