https://github.com/teerjk/VarSifter
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Tip revision: 7e57e5857b08f5253f28e96477fc211f67a0ffea authored by Jamie K. Teer on 27 April 2020, 14:42:41 UTC
-Documentation updates to point to github.
Tip revision: 7e57e58
snpEFF.vs.json
{
    "main": {
        "format": "snpEFF",
        "columnKey": "EFF"
    },
    "multidelim": ",",
    "data": {
        "singledelim": "\\(|\\|",
        "type": 0,
        "type_allowed": [
            "SPLICE_SITE_ACCEPTOR",
            "SPLICE_SITE_DONOR",
            "START_LOST",
            "EXON_DELETED",
            "FRAME_SHIFT",
            "STOP_GAINED",
            "STOP_LOST",
            "NON_SYNONYMOUS_CODING",
            "CODON_CHANGE",
            "CODON_INSERTION",
            "CODON_CHANGE_PLUS_CODON_INSERTION",
            "CODON_DELETION",
            "CODON_CHANGE_PLUS_CODON_DELETION",
            "UTR_5_DELETED",
            "UTR_3_DELETED",
            "SYNONYMOUS_START",
            "NON_SYNONYMOUS_START",
            "START_GAINED",
            "SYNONYMOUS_CODING",
            "SYNONYMOUS_STOP",
            "NON_SYNONYMOUS_STOP",
            "UTR_5_PRIME",
            "UTR_3_PRIME",
            "UPSTREAM",
            "DOWNSTREAM",
            "REGULATION"
        ],
        "Gene_name": 5
    }
}
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