https://github.com/yaml2sbml-dev/yaml2sbml
Tip revision: 43ef3cb478ef30cfc0f1f4e232499824baf20598 authored by Jakob Vanhoefer on 30 July 2021, 11:38:30 UTC
correct data release notes
correct data release notes
Tip revision: 43ef3cb
.gitignore
**/__pycache__/
*.egg-info/
# PyCharm
.idea/
# files generated by tests
yaml2sbml/tests/test_yaml2sbml/sbml_test.xml
# Documentation build
/doc/build
### Files generated when running the notebooks (AMICI + PEtab files)
**/amici_models/
**/AMICI_models/
## FSP examples
/doc/examples/Finite_State_Projection/gene_expression.xml
## Format Features
/doc/examples/Format_Features/functions_in_rhs.xml
/doc/examples/Format_Features/step_function.xml
/doc/examples/Format_Features/time_dependent_rhs.xml
## Lotka Volterra
/doc/examples/Lotka_Volterra/Lotka_Volterra_CLI/Lotka_Volterra_PEtab.yml
/doc/examples/Lotka_Volterra/Lotka_Volterra_CLI/Lotka_Volterra_PEtab/
/doc/examples/Lotka_Volterra/Lotka_Volterra_CLI/Lotka_Volterra_basic.xml
/doc/examples/Lotka_Volterra/Lotka_Volterra_Model_Editor/Lotka_Volterra_PEtab.yaml
/doc/examples/Lotka_Volterra/Lotka_Volterra_Model_Editor/Lotka_Volterra_PEtab/
/doc/examples/Lotka_Volterra/Lotka_Volterra_Model_Editor/Lotka_Volterra_basic.xml
/doc/examples/Lotka_Volterra/Lotka_Volterra_Model_Editor/Lotka_Volterra_basic.yaml
/doc/examples/Lotka_Volterra/Lotka_Volterra_python/Lotka_Volterra_AMICI/
/doc/examples/Lotka_Volterra/Lotka_Volterra_python/Lotka_Volterra_PEtab/Lotka_Volterra_with_observables.xml
/doc/examples/Lotka_Volterra/Lotka_Volterra_python/Lotka_Volterra_PEtab/experimental_conditions_Lotka_Volterra_with_observables.tsv
/doc/examples/Lotka_Volterra/Lotka_Volterra_python/Lotka_Volterra_PEtab/observables_Lotka_Volterra_with_observables.tsv
/doc/examples/Lotka_Volterra/Lotka_Volterra_python/Lotka_Volterra_PEtab/parameters_Lotka_Volterra_with_observables.tsv
/doc/examples/Lotka_Volterra/Lotka_Volterra_python/Lotka_Volterra_PEtab/problem.yml
/doc/examples/Lotka_Volterra/Lotka_Volterra_python/Lotka_Volterra_basic.xml
## Sorensen
/doc/examples/Sorensen/Fig71_Sorensen1985.xml
### JupyterNotebooks ###
# gitignore template for Jupyter Notebooks
# website: http://jupyter.org/
.ipynb_checkpoints
*/.ipynb_checkpoints/*
# IPython
profile_default/
ipython_config.py
# Remove previous ipynb_checkpoints
# git rm -r .ipynb_checkpoints/
### macOS ###
# General
.DS_Store
.AppleDouble
.LSOverride
# Icon must end with two \r
Icon
# Thumbnails
._*
# Files that might appear in the root of a volume
.DocumentRevisions-V100
.fseventsd
.Spotlight-V100
.TemporaryItems
.Trashes
.VolumeIcon.icns
.com.apple.timemachine.donotpresent
# Directories potentially created on remote AFP share
.AppleDB
.AppleDesktop
Network Trash Folder
Temporary Items
.apdisk
# Build
/build/
/dist/
# File-based project format
*.iws
# IntelliJ
out/
# mpeltonen/sbt-idea plugin
.idea_modules/
# JIRA plugin
atlassian-ide-plugin.xml
# Crashlytics plugin (for Android Studio and IntelliJ)
com_crashlytics_export_strings.xml
crashlytics.properties
crashlytics-build.properties
fabric.properties
# vim
*.swp
# tox
/.tox
# coverage
/.coverage
/htmlcov
/coverage.xml