https://github.com/GPflow/GPflow
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Tip revision: af90c6e97f09f0b9a77d2fcc796f8a031ad097e8 authored by alexggmatthews on 06 June 2016, 17:06:36 UTC
Building up cone.
Tip revision: af90c6e
test_autoflow.py
import GPflow
import tensorflow as tf
import numpy as np
import unittest


class DumbModel(GPflow.model.Model):
    def __init__(self):
        GPflow.model.Model.__init__(self)
        self.a = GPflow.param.Param(3.)

    def build_likelihood(self):
        return -tf.square(self.a)


class NoArgsModel(DumbModel):

    @GPflow.model.AutoFlow()
    def function(self):
        return self.a


class TestNoArgs(unittest.TestCase):
    def setUp(self):
        tf.reset_default_graph()
        self.m = NoArgsModel()
        self.m._compile()

    def test_return(self):
        self.failUnless(np.allclose(self.m.function(), 3.))


class AddModel(DumbModel):
    @GPflow.model.AutoFlow((tf.float64,), (tf.float64,))
    def add(self, x, y):
        return tf.add(x, y)


class TestAdd(unittest.TestCase):
    def setUp(self):
        tf.reset_default_graph()
        self.m = AddModel()
        self.m._compile()
        rng = np.random.RandomState(0)
        self.x = rng.randn(10, 20)
        self.y = rng.randn(10, 20)

    def test_add(self):
        self.failUnless(np.allclose(self.x + self.y, self.m.add(self.x, self.y)))


class TestGPmodel(unittest.TestCase):
    def setUp(self):
        tf.reset_default_graph()
        rng = np.random.RandomState(0)
        X, Y = rng.randn(2, 10, 1)
        self.m = GPflow.svgp.SVGP(X, Y, kern=GPflow.kernels.Matern32(1),
                                  likelihood=GPflow.likelihoods.StudentT(),
                                  Z=X[::2].copy())
        self.Xtest = np.random.randn(100, 1)
        self.Ytest = np.random.randn(100, 1)

    def test_predict_f(self):
        mu, var = self.m.predict_f(self.Xtest)

    def test_predict_y(self):
        mu, var = self.m.predict_y(self.Xtest)

    def test_predict_density(self):
        d = self.m.predict_density(self.Xtest, self.Ytest)


class TestResetGraph(unittest.TestCase):
    def setUp(self):
        tf.reset_default_graph()
        k = GPflow.kernels.Matern32(1)
        X, Y = np.random.randn(2, 10, 1)
        self.Xnew = np.random.randn(5, 1)
        self.m = GPflow.gpr.GPR(X, Y, kern=k)

    def test(self):
        mu, var = self.m.predict_f(self.Xnew)
        tf.reset_default_graph()
        mu1, var1 = self.m.predict_f(self.Xnew)


class TestFixAndPredict(unittest.TestCase):
    """
    Bug #54 says that if a model parameter is fixed  between calls to predict
    (an autoflow fn) then the second call fails. This test ensures replicates
    that and ensures that the bugfix remains in furure.
    """
    def setUp(self):
        rng = np.random.RandomState(0)
        X, Y = rng.randn(2, 10, 1)
        self.m = GPflow.svgp.SVGP(X, Y, kern=GPflow.kernels.Matern32(1),
                                  likelihood=GPflow.likelihoods.StudentT(),
                                  Z=X[::2].copy())
        self.Xtest = np.random.randn(100, 1)
        self.Ytest = np.random.randn(100, 1)

    def test(self):
        self.m._compile()
        self.m.kern.variance.fixed = True
        _, _ = self.m.predict_f(self.m.X)


if __name__ == "__main__":
    unittest.main()
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