https://github.com/scverse/scanpy
- HEAD
- refs/heads/1.6.x
- refs/heads/1.7.x
- refs/heads/1.8.x
- refs/heads/1.9.x
- refs/heads/add-extra-descriptions
- refs/heads/add_ciara_to_ecosystem
- refs/heads/batch_pca
- refs/heads/bump-anndata-req
- refs/heads/certs
- refs/heads/colorbar
- refs/heads/combat_adjusted
- refs/heads/d69832a
- refs/heads/dendr_fix
- refs/heads/embedding_density_diff
- refs/heads/embedding_legend_loc_None
- refs/heads/falexwolf-patch-1
- refs/heads/falexwolf-patch-3
- refs/heads/feature/flake8
- refs/heads/fix-h5py
- refs/heads/fix-normalize-per-cell-int
- refs/heads/fix_documentation
- refs/heads/fix_heatmap
- refs/heads/fix_heatmap_tutorial
- refs/heads/fix_ranked_genes_violin_plot
- refs/heads/fix_rgg_plot
- refs/heads/fix_sorting_error_pandas1_2
- refs/heads/fixup-927
- refs/heads/gh-pages
- refs/heads/giovp-patch-1
- refs/heads/gokceneraslan-patch-2
- refs/heads/gokceneraslan-prepare-dataframe-multiindex
- refs/heads/gokceneraslan-vcenter-releasenotes
- refs/heads/groupby_index2
- refs/heads/heatmap_colormatching
- refs/heads/highly_variable_genes
- refs/heads/hue_violin_plot
- refs/heads/ingest-fix
- refs/heads/interlinks
- refs/heads/ivirshup-test-actions
- refs/heads/kbet
- refs/heads/marker_gene_overlap_fix
- refs/heads/master
- refs/heads/moran
- refs/heads/normalize-scran
- refs/heads/paga_fix_root
- refs/heads/paga_key_added
- refs/heads/pca_sparse
- refs/heads/pearson_residuals_1.7
- refs/heads/plot_diffmap
- refs/heads/plotting-overhaul
- refs/heads/pre-commit-ci-update-config
- refs/heads/prep-1.7.2-release
- refs/heads/preserve-formats
- refs/heads/pynndescent-tests
- refs/heads/rank_abs
- refs/heads/revert-1105-fix-read_visium
- refs/heads/rgg_check
- refs/heads/rgg_filter
- refs/heads/rgg_refactor
- refs/heads/scale-anno-mean-std
- refs/heads/score_layers
- refs/heads/scran
- refs/heads/sctransform
- refs/heads/skip-louvain-tests
- refs/heads/spatial
- refs/heads/speedup_get_obs_df
- refs/heads/split
- refs/heads/swapaxes_vargrouprotation
- refs/heads/test-rtd-failures
- refs/heads/test-rtd-failures-2
- refs/heads/test-rtd-failures-3
- refs/heads/test-utils
- refs/heads/update-datasets
- refs/heads/use-scanpydoc
- refs/heads/withreplacement
- refs/tags/0.0
- refs/tags/0.2
- refs/tags/0.2.3
- refs/tags/0.2.3.5
- refs/tags/0.2.4
- refs/tags/0.2.5
- refs/tags/0.2.6
- refs/tags/0.2.7
- refs/tags/0.2.8
- refs/tags/0.2.9
- refs/tags/0.2.9.1
- refs/tags/0.3
- refs/tags/0.3.1
- refs/tags/0.3.2
- refs/tags/0.4
- refs/tags/0.4.1
- refs/tags/0.4.2
- refs/tags/0.4.2.post1
- refs/tags/0.4.2.post2
- refs/tags/0.4.3
- refs/tags/0.4.4
- refs/tags/1.0
- refs/tags/1.0.1
- refs/tags/1.0.2
- refs/tags/1.0.3
- refs/tags/1.0.4
- refs/tags/1.1
- refs/tags/1.10.0.dev0
- refs/tags/1.1a1
- refs/tags/1.1a2
- refs/tags/1.2.0
- refs/tags/1.2.1
- refs/tags/1.2.2
- refs/tags/1.3
- refs/tags/1.3.1
- refs/tags/1.3.2
- refs/tags/1.3.3
- refs/tags/1.3.4
- refs/tags/1.3.5
- refs/tags/1.3.6
- refs/tags/1.3.7
- refs/tags/1.3.8
- refs/tags/1.4
- refs/tags/1.4.1
- refs/tags/1.4.2
- refs/tags/1.4.3
- refs/tags/1.4.4
- refs/tags/1.4.4.post1
- refs/tags/1.4.5
- refs/tags/1.4.5.1
- refs/tags/1.4.5.post1
- refs/tags/1.4.5.post2
- refs/tags/1.4.5.post3
- refs/tags/1.4.6
- refs/tags/1.5.0
- refs/tags/1.5.0a1
- refs/tags/1.5.1
- refs/tags/1.6.0
- refs/tags/1.6.1
- refs/tags/1.7.0
- refs/tags/1.7.0rc1
- refs/tags/1.7.1
- refs/tags/1.7.2
- refs/tags/1.8.0
- refs/tags/1.8.0.dev0
- refs/tags/1.8.1
- refs/tags/1.8.2
- refs/tags/1.9.0
- refs/tags/1.9.0.dev0
- refs/tags/1.9.1
- refs/tags/1.9.2
- refs/tags/1.9.3
- refs/tags/docs
Cook and download a directory from the Software Heritage Vault
You have requested the cooking of the directory with identifier swh:1:dir:9b301ed66e2de327093853a4fcec887777437548 into a standard tar.gz archive.
Are you sure you want to continue ?
Download a directory from the Software Heritage Vault
You have requested the download of the directory with identifier swh:1:dir:9b301ed66e2de327093853a4fcec887777437548 as a standard tar.gz archive.
Are you sure you want to continue ?
Cook and download a revision from the Software Heritage Vault
You have requested the cooking of the history heading to revision with identifier swh:1:rev:159f2f86430e6f00e14d08775e7d76841f3888a3 into a bare git archive.
Are you sure you want to continue ?
Download a revision from the Software Heritage Vault
You have requested the download of the history heading to revision with identifier swh:1:rev:159f2f86430e6f00e14d08775e7d76841f3888a3 as a bare git archive.
Are you sure you want to continue ?
Invalid Email !
The provided email is not well-formed.
Download link has expired
The requested archive is no longer available for download from the Software Heritage Vault.
Do you want to cook it again ?
Take a new snapshot of a software origin
If the archived software origin currently browsed is not synchronized with its upstream version (for instance when new commits have been issued), you can explicitly request Software Heritage to take a new snapshot of it.
Use the form below to proceed. Once a request has been submitted and accepted, it will be processed as soon as possible. You can then check its processing state by visiting this dedicated page.
Processing "take a new snapshot" request ...
To reference or cite the objects present in the Software Heritage archive, permalinks based on SoftWare Hash IDentifiers (SWHIDs) must be used.
Select below a type of object currently browsed in order to display its associated SWHID and permalink.
update with spatial functions
| File | Mode | Size |
|---|---|---|
| .github | ||
| docs | ||
| scanpy | ||
| .coveragerc | -rw-r--r-- | 19 bytes |
| .editorconfig | -rw-r--r-- | 176 bytes |
| .gitattributes | -rw-r--r-- | 32 bytes |
| .gitignore | -rw-r--r-- | 616 bytes |
| .readthedocs.yml | -rw-r--r-- | 46 bytes |
| .travis.yml | -rw-r--r-- | 930 bytes |
| CONTRIBUTING.md | -rw-r--r-- | 5.2 KB |
| LICENSE | -rw-r--r-- | 1.5 KB |
| MANIFEST.in | -rw-r--r-- | 191 bytes |
| README.rst | -rw-r--r-- | 2.1 KB |
| conftest.py | -rw-r--r-- | 770 bytes |
| pyproject.toml | -rw-r--r-- | 1.3 KB |
| pytest.ini | -rw-r--r-- | 80 bytes |
| requirements.txt | -rw-r--r-- | 437 bytes |
| setup.py | -rw-r--r-- | 2.3 KB |
