https://github.com/cran/coin
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Tip revision: 1d1da53d71a24a7cd371709574597ca3332c7d69 authored by Torsten Hothorn on 14 March 2005, 00:00:00 UTC
version 0.2-9
Tip revision: 1d1da53
glioma.Rd
\name{glioma}
\alias{glioma}
\docType{data}
\title{ Malignant Glioma Pilot Study}
\description{
  A non-randomized pilot study on malignant glioma patients with 
  pretargeted adjuvant radioimmunotherapy using Yttrium-90-biotin.
}
\usage{data(glioma)}
\format{
  A data frame with 37 observations on the following 7 variables.
  \describe{
    \item{no.}{patient number.}
    \item{age}{patients ages in years.}
    \item{sex}{a factor with levels \code{F}(emale) and \code{M}(ale). }
    \item{histology}{a factor with levels \code{GBM} (grade IV) and 
                     \code{Grade3} (grade III)}
    \item{time}{survival times in month.}
    \item{event}{censoring indicator: \code{FALSE} censored and \code{TRUE} dead.}
    \item{group}{a factor with levels \code{Control} and \code{RIT}.}
  }
}
\details{
  The primary endpoint of this small pilot study is survival. 
  Survival times are tied, the usual asymptotic log-rank test may be
  inadequate in this setup. Therefore, a permutation test (via Monte-Carlo sampling) 
  was conducted in the original paper. The data are taken from Tables 1 and 2 of 
  Grana et al. (2002).
}
\source{

    C. Grana, M. Chinol, C. Robertson, C. Mazzetta, M. Bartolomei, C. De
    Cicco, M. Fiorenza, M. Gatti, P. Caliceti & G. Paganelli (2002),
    Pretargeted adjuvant radioimmunotherapy with Yttrium-90-biotin in malignant
    glioma patients: A pilot study. \emph{British Journal of Cancer},
    \bold{86}(2), 207--212.
}
\examples{

data(glioma, package = "coin")

par(mfrow=c(1,2))

### Grade III glioma
g3 <- subset(glioma, histology == "Grade3")

### Plot Kaplan-Meier curves
plot(survfit(Surv(time, event) ~ group, data=g3), 
     main="Grade III Glioma", lty=c(2,1), 
     legend.text=c("Control", "Treated"),
     legend.bty=1, ylab="Probability", 
     xlab="Survival Time in Month")

### logrank test
surv_test(Surv(time, event) ~ group, data = g3, 
             distribution = "exact")

### Grade IV glioma
gbm <- subset(glioma, histology == "GBM")

### Plot Kaplan-Meier curves
plot(survfit(Surv(time, event) ~ group, data=gbm), 
     main="Grade IV Glioma", lty=c(2,1), 
     legend.text=c("Control", "Treated"),
     legend.bty=1, legend.pos=1, ylab="Probability", 
     xlab="Survival Time in Month")
   
### logrank test
surv_test(Surv(time, event) ~ group, data = gbm, 
             distribution = "exact")

### stratified logrank test
surv_test(Surv(time, event) ~ group | histology, data = glioma,
             distribution = "approx", B = 10000)

}
\keyword{datasets}
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