https://github.com/cran/ape
Tip revision: 397c0d84573dedf9fdca94039718a7664182e2af authored by Emmanuel Paradis on 12 August 2003, 00:00:00 UTC
version 1.1-3
version 1.1-3
Tip revision: 397c0d8
DESCRIPTION
Package: ape
Version: 1.1-3
Date: 2003-08-12
Title: Analyses of Phylogenetics and Evolution
Author: Emmanuel Paradis <paradis@isem.univ-montp2.fr>
Korbinian Strimmer <strimmer@stat.uni-muenchen.de>
Julien Claude <claude@isem.univ-montp2.fr>
Gangolf Jobb <gangolf@treefinder.de>
Yvonnick Noel <noel@univ-lille3.fr>
Ben Bolker <bolker@zoo.ufl.edu>
Maintainer: Emmanuel Paradis <paradis@isem.univ-montp2.fr>
Depends: gee
Description: Ape provides functions for reading, writing, plotting,
and manipulating phylogenetic trees, analyses of comparative data
in a phylogenetic framework, analyses of diversification and
macroevolution, computing distances from allelic and nucleotide
data, reading nucleotide sequences, and several tools such as
Mantel's test, computation of minimum spanning tree, the population
parameter theta based on various approaches, generalized skyline plots,
estimation of absolute evolutionary rates and clock-like
trees using non-parametric rate smoothing, conversion of APE trees
to and from hclust objects and for classifying genes in trees using
the Klastorin-Misawa-Tajima approach.
License: GPL version 2 or newer