https://github.com/cran/ape
Tip revision: e566404f3d03faad3cbdb5850f96ccbb1eafc679 authored by Emmanuel Paradis on 02 November 2004, 00:00:00 UTC
version 1.3-1
version 1.3-1
Tip revision: e566404
DESCRIPTION
Package: ape
Version: 1.3-1
Date: 2004-11-02
Title: Analyses of Phylogenetics and Evolution
Author: Emmanuel Paradis <paradis@isem.univ-montp2.fr>,
Korbinian Strimmer <strimmer@stat.uni-muenchen.de>,
Julien Claude <claude@isem.univ-montp2.fr>,
Gangolf Jobb <gangolf.deletethis@treefinder.de>,
Rainer Opgen-Rhein <opgen@stat.uni-muenchen.de>,
Julien Dutheil <julien.dutheil@univ-montp2.fr>,
Yvonnick Noel <noel@univ-lille3.fr>,
Ben Bolker <bolker@zoo.ufl.edu>
Maintainer: Emmanuel Paradis <paradis@isem.univ-montp2.fr>
Depends: R (>= 2.0.0)
Suggests: gee, nlme, lattice
ZipData: no
Description: Ape provides functions for reading, writing, plotting,
and manipulating phylogenetic trees, analyses of comparative data
in a phylogenetic framework, analyses of diversification and
macroevolution, computing distances from allelic and nucleotide
data, reading nucleotide sequences, and several tools such as
Mantel's test, computation of minimum spanning tree, the population
parameter theta based on various approaches, generalized skyline plots,
estimation of absolute evolutionary rates and clock-like
trees using non-parametric rate smoothing, conversion of APE trees
to and from hclust objects and for classifying genes in trees using
the Klastorin-Misawa-Tajima approach.
License: GPL version 2 or newer
Packaged: Wed Nov 10 17:17:55 2004; PARADYS