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https://github.com/sanger-pathogens/gubbins
06 April 2024, 00:41:52 UTC
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Tip revision: 4b7486a7e3670114c0a5d86bd5ac314e188ed09d authored by andrewjpage on 06 March 2015, 11:30:39 UTC
Merge pull request #128 from andrewjpage/update_robustness
Tip revision: 4b7486a
File Mode Size
alignment_file_multiple_lines_per_sequence.aln -rw-r--r-- 214.1 KB
alignment_file_multiple_lines_per_sequence.aln.phylip -rw-r--r-- 211.3 KB
alignment_file_multiple_lines_per_sequence.aln.snp_sites.aln -rw-r--r-- 211.4 KB
alignment_file_multiple_lines_per_sequence.aln.vcf -rw-r--r-- 462.9 KB
alignment_file_one_line_per_sequence.aln -rw-r--r-- 214.1 KB
alignment_file_one_line_per_sequence.aln.gz -rw-r--r-- 3.4 KB
alignment_file_one_line_per_sequence.aln.phylip -rw-r--r-- 214.0 KB
alignment_file_one_line_per_sequence.aln.snp_sites.aln -rw-r--r-- 214.1 KB
alignment_file_one_line_per_sequence.aln.vcf -rw-r--r-- 468.8 KB
alignment_file_one_line_per_sequence.tre -rw-r--r-- 1.5 KB
alignment_file_with_large_number_of_snps.aln -rw-r--r-- 19.5 KB
alignment_file_with_large_number_of_snps.aln.phylip -rw-r--r-- 19.4 KB
alignment_file_with_large_number_of_snps.aln.snp_sites.aln -rw-r--r-- 19.4 KB
alignment_file_with_large_number_of_snps.aln.vcf -rw-r--r-- 250.4 KB
alignment_file_with_n.aln -rw-r--r-- 214.1 KB
alignment_file_with_n.aln.phylip -rw-r--r-- 1.6 KB
alignment_file_with_n.aln.snp_sites.aln -rw-r--r-- 1.7 KB
alignment_file_with_n.aln.vcf -rw-r--r-- 2.3 KB
alignment_with_gap_in_parent.aln -rw-r--r-- 39 bytes
alignment_with_gaps.aln -rw-r--r-- 50 bytes
multiple_recombinations.aln -rw-r--r-- 2.5 KB
multiple_recombinations.aln.phylip -rw-r--r-- 2.2 KB
multiple_recombinations.aln.snp_sites.aln -rw-r--r-- 3.9 KB
multiple_recombinations.aln.vcf -rw-r--r-- 8.7 KB
multiple_recombinations.expected.stats -rw-r--r-- 372 bytes
multiple_recombinations.expected.tre -rw-r--r-- 309 bytes
multiple_recombinations.original.tre -rw-r--r-- 297 bytes
multiple_recombinations.tre.branch_snps.expected.tab -rw-r--r-- 53.4 KB
no_recombinations.aln -rw-r--r-- 847 bytes
no_recombinations.aln.phylip -rw-r--r-- 186 bytes
no_recombinations.aln.snp_sites.aln -rw-r--r-- 278 bytes
no_recombinations.aln.vcf -rw-r--r-- 477 bytes
no_recombinations.expected.stats -rw-r--r-- 324 bytes
no_recombinations.expected.tre -rw-r--r-- 306 bytes
no_recombinations.original.tre -rw-r--r-- 298 bytes
no_recombinations.tre.branch_snps.expected.tab -rw-r--r-- 2.0 KB
one_recombination.aln -rw-r--r-- 3.3 KB
one_recombination.aln.phylip -rw-r--r-- 1.4 KB
one_recombination.aln.snp_sites.aln -rw-r--r-- 2.5 KB
one_recombination.aln.vcf -rw-r--r-- 5.6 KB
one_recombination.expected.stats -rw-r--r-- 962 bytes
one_recombination.expected.tre -rw-r--r-- 320 bytes
one_recombination.expected.vcf -rw-r--r-- 1.5 KB
one_recombination.original.tre -rw-r--r-- 301 bytes
one_recombination.tre.branch_snps.expected.tab -rw-r--r-- 31.8 KB
one_recombination.tre.expected.gff -rw-r--r-- 144 bytes
one_recombination.tre.expected.tab -rw-r--r-- 180 bytes
small_alignment.aln -rw-r--r-- 96 bytes
small_phylip_file.aln -rw-r--r-- 47 bytes
two_sequences.aln -rw-r--r-- 3.9 KB
two_sequences.aln.phylip -rw-r--r-- 2.9 KB
two_sequences.aln.snp_sites.aln -rw-r--r-- 2.9 KB
two_sequences.aln.vcf -rw-r--r-- 36.7 KB
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